NO12G00390.1, NO12G00390.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO12G00390.1
Unique NameNO12G00390.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5078
Alignment locationchr12:141260..146773 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:141260..146773 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO12G00390.1 vs.
Match: EWM25989.1 (p-type h+-atpase [Nannochloropsis gaditana])

HSP 1 Score: 1613.6 bits (4177), Expect = 0.000e+0
Identity = 841/989 (85.04%), Postives = 897/989 (90.70%), Query Frame = 0
Query:    1 MNTLKNGAGRPSGQAPPTKALDSYDDEM---DILKGEFFDDEGRMSTNAGMQSEEDHLRDVQRTVQMVRSASIALSVRSQDSMGEGKSMSRMRSLRAVFSNSEDKGEEETKVALDEMFDEGTMPVHMTRSKSVVNLDSEGLSSALAAELLKKFGRNELPETKKPNWLIFLEQLYQPMPLMIWMAIIIEAAIESWPDMGILLAIQFLNASLSYYETTKAGDAVAALKASLKPLAYVKRDGKFMQMDAALLVPGDLVLLGAGGAVPADCVVKDSQIDVDQAALTGESLPVTMYKGDSCKMGSTVVRGEVEATVEATGANTFFGRTASLLTGGDEVSNLQKLLMRIMIILVVLSMTLCLIAFGYLLGRGETLREALSFTVVLLVASIPIAIEIVCTTTLALGSRQLARDGAIVSRLAAIEDMAGMSILCSDKTGTLTLNKMMIQEETPIYMEGETQYSALRLAAMASKWTEPPRDALDTLVHGAADLASLEEVQQTDYMPFDPTVKRTEGTISLPTGEAFKVTKGAPHVILSLLDQNSHASVIEQCEKDVEALGERGIRSLAVAKTNGGVDGAWEMVGLLTFLDPPRPDTKDTIDRARGFGVEVKMITGDHLLIAKETARQLGMGTNIENAAQLPKLDEDRKPPKNLMDHFEYIEATSGFAQVFPEHKFLIVEALRRGGYKTGMTGDGVNDAPALQRADVGVAVQGSTDAARAAADIVLTKPGLSTIVTAIVVARTVFGRMTSFITYRIAATLQLLVFFFIAVLTMQPSKFQPAGAVDEWPAFFHMPVMMLMLITLLNDGTLISIGYDNVVPNTTPDKWNLKVLFTIAGVLGGVACLSSLAMLWVALNCHEPNGVWAGLGLAPLTYGQITSMVYLKVSISDFLTLFSSRSGAGFFWTNKPSKILLIAAGIACSLSTIMANAWPESMPDGVPTVGMARAEPRELSVIVWVYCLICWFIQDAAKVGMYALLKRYNTFGINDIVAMKKVDPSTKV 987
            M+T  NG G P   A   KAL +   E    D+LKGEF+DD GR++TNAGMQSEEDH R++QRT+QMVRSA+ ALSVRSQ S  E +SMSRM+SLRAVFS+ EDK EEE KV LD++FDE  +PV MTR+K+V +LDSEGLSSALAAELLKKFGRNELPE KKP WLIFLEQLYQPMPLMIW AIIIEAAIESWPDMGILL IQF+NASLSYYETTKAGDAVAALKASLKPLAYVKRDGKF+ MDAALLVPGDLVLLGAGGA+PADCVVKDSQIDVDQAALTGESLPVT +KGDS KMGSTVVRGEVEATVEATGANTFFGRTA+LLTGGDEVSNLQKLLMRIMIILVVLSM LC IAFGYLL RGET+RE+LSFTVVLLVASIPIAIEIVCTTTLALGSR+LA+DGAIVSRLAAIEDMAGMSILCSDKTGTLTLNKMMIQEETPIY+EGETQY+ALR AAMASKW EP RDALDTLVHGAADL SL +VQQ DYMPFDPT+KRTEGTI LP+GE FKV+KGAPH+I+ LLDQ + ASVIEQCEKDVE LGERGIRSLAVAKT G  DG WE++GLLTFLDPPRPDTKDTIDRAR FGVEVKMITGDHLLIAKETARQLGMGT+IENA +LPKL EDRK P NLMD F Y+E TSGFAQVFPEHKFLIVE LRRGGYKTGMTGDGVNDAPALQRADVGVAVQG+TDAARAAADIVLTKPGLSTIVTAI+VARTVFGRMTSFITYRIAATLQLL+FFFIAVLTM P  FQP  A++EWPAFFHMPVMMLMLITLLNDGTLISIGYDNVVPNTTPDKWNLKVLFTIAGVLGGVA LSSL MLWVALN H P G+WA  GLA LTYGQITSMVYLKVSISDFLTLFSSRSG GFFWTNKPS ILL+AAGIACSLSTIMANAWPES PDGVPT+G+AR  P+ELS+ VW+YCL+CWFIQDAAKVG YALLKR N FGIND+VAMKK DPST V
Sbjct:   99 MSTADNGDG-PKSVAAMAKALAAQRGEEYVHDLLKGEFYDDGGRITTNAGMQSEEDHEREIQRTIQMVRSATHALSVRSQGS--EQRSMSRMQSLRAVFSSREDK-EEEAKVPLDDLFDENDVPVTMTRTKTVTSLDSEGLSSALAAELLKKFGRNELPEKKKPKWLIFLEQLYQPMPLMIWAAIIIEAAIESWPDMGILLGIQFMNASLSYYETTKAGDAVAALKASLKPLAYVKRDGKFLSMDAALLVPGDLVLLGAGGAIPADCVVKDSQIDVDQAALTGESLPVTFFKGDSVKMGSTVVRGEVEATVEATGANTFFGRTAALLTGGDEVSNLQKLLMRIMIILVVLSMALCGIAFGYLLSRGETVRESLSFTVVLLVASIPIAIEIVCTTTLALGSRELAKDGAIVSRLAAIEDMAGMSILCSDKTGTLTLNKMMIQEETPIYVEGETQYTALRFAAMASKWNEPARDALDTLVHGAADLKSLADVQQIDYMPFDPTIKRTEGTIRLPSGETFKVSKGAPHIIMGLLDQTAQASVIEQCEKDVEGLGERGIRSLAVAKTKGSADGPWELIGLLTFLDPPRPDTKDTIDRARDFGVEVKMITGDHLLIAKETARQLGMGTHIENAGKLPKLGEDRKAPANLMDFFSYVEETSGFAQVFPEHKFLIVEVLRRGGYKTGMTGDGVNDAPALQRADVGVAVQGATDAARAAADIVLTKPGLSTIVTAIIVARTVFGRMTSFITYRIAATLQLLIFFFIAVLTMYPRDFQPESALEEWPAFFHMPVMMLMLITLLNDGTLISIGYDNVVPNTTPDKWNLKVLFTIAGVLGGVALLSSLLMLWVALNSHNPAGIWAKAGLAGLTYGQITSMVYLKVSISDFLTLFSSRSGGGFFWTNKPSGILLVAAGIACSLSTIMANAWPESRPDGVPTIGLARVAPKELSLYVWIYCLLCWFIQDAAKVGAYALLKRNNIFGINDVVAMKKADPSTAV 1083          
The following BLAST results are available for this feature:
BLAST of NO12G00390.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25989.10.000e+085.04p-type h+-atpase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G00390NO12G00390Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO12G00390.1NO12G00390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO12G00390.1.cds1NO12G00390.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00390.1.cds2NO12G00390.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00390.1.cds3NO12G00390.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00390.1.cds4NO12G00390.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO12G00390.1 ID=NO12G00390.1|Name=NO12G00390.1|organism=Nannochloropsis oceanica|type=mRNA|length=5078bp
CAGAAGCCTTTCGCCCGTCAAGGCGGATGGCCAACGCGGCAAGCATAGTG
TCTAGTGCTAGTGCCAGATATTCTTTGACACGCGGGTCGCACCAACAAGG
TATGGAATGTGAAAACGGCCTGAACAGGAGTCTCGGCCGGACGCGGAAAC
GGATCAGTGAATATTCGGTAATTCTTCTTCACTTTGCTCCAGCCTGCCCA
TTATAGCAGCATGGCTGTGCTTTTCCTTGTGTGCTTGTTAAAAATGGCTG
TTTTTTTTTGTCACTAGGCTACTGGAATGATTTTAGCACACTCGTCTGGT
CTTTCCATGGACTTTGGCTTCGTCAAAGCGCAGGGATGTCGCGTGGCAAG
CAGATGCGGGTATTTACGCAGGCGGACATTGCTTGTCCAATCCCAAGCCC
AGGAGCGACAATTCAGGTCGTACCGTTCAGTGCTTTTGAGACTTGAATAT
TATTCGATCTTTCATCGTGACTTTTTGGTGAACTTCTCACCAGAATACAC
ACGCACTAGACATCATGAACACTCTCAAGAACGGTGCTGGGAGGCCGAGC
GGGCAAGCGCCGCCGACCAAGGCGCTTGATTCCTACGATGACGAAATGGA
TATTCTCAAGGGCGAATTTTTCGACGACGAGGGCCGTATGTCTACAAATG
CCGGCATGCAGTCTGAAGAAGATCATCTGCGTGACGTGCAGCGCACCGTG
CAAATGGTCCGTAGCGCCTCCATTGCCTTGAGCGTACGCTCGCAGGACTC
CATGGGCGAAGGAAAATCCATGTCTCGGATGCGAAGCTTGCGTGCCGTCT
TCTCCAACAGCGAGGACAAGGGGGAAGAGGAAACCAAGGTGGCATTGGAC
GAGATGTTCGACGAGGGCACCATGCCTGTACACATGACCCGTAGCAAATC
CGTCGTCAACCTAGACTCCGAAGGCCTCTCCTCCGCCTTGGCAGCCGAGC
TCCTAAAAAAATTCGGCCGCAACGAGCTACCCGAGACCAAAAAGCCCAAC
TGGCTCATTTTCCTGGAACAGCTGTACCAGCCCATGCCCCTCATGATCTG
GATGGCCATCATCATCGAGGCCGCCATCGAGTCCTGGCCTGACATGGGCA
TCCTTCTGGCCATCCAGTTCCTGAACGCCTCCCTGTCCTACTACGAGACC
ACCAAGGCCGGCGACGCCGTCGCTGCGCTCAAGGCCTCCCTCAAGCCGCT
GGCATATGTGAAGCGGGACGGGAAGTTTATGCAAATGGATGCGGCGCTGC
TGGTGCCCGGTGACTTGGTGCTGCTCGGGGCGGGTGGAGCTGTACCTGCT
GACTGTGTGGTCAAAGACTCCCAGATCGATGTGGACCAGGCTGCCCTGAC
TGGGGAGTCGCTTCCCGTGACCATGTACAAGGGCGACTCTTGCAAGATGG
GCTCTACCGTCGTGCGTGGTGAGGTCGAGGCTACCGTGGAGGCCACGGGC
GCCAACACCTTCTTCGGCCGTACTGCATCCCTGCTCACAGGTGGGGACGA
GGTGTCCAACCTTCAGAAGCTGCTGATGCGCATCATGATTATTCTCGTCG
TGCTGTCCATGACTCTGTGCCTGATTGCTTTCGGCTACCTGCTCGGCCGC
GGAGAGACCCTGCGTGAGGCTCTGTCGTTCACCGTCGTGCTGCTGGTCGC
CTCCATCCCCATCGCCATCGAGATTGTCTGCACCACCACTCTGGCCCTGG
GCTCCCGGCAACTGGCTAGAGACGGTGCCATCGTCTCTCGTCTGGCCGCC
ATCGAGGACATGGCTGGCATGTCTATTCTGTGCTCCGACAAGACCGGCAC
CTTGACCCTTAACAAGATGATGATCCAAGAGGAGACCCCTATTTACATGG
AGGGCGAGACCCAGTACTCGGCTTTGCGTCTTGCGGCCATGGCCTCCAAG
TGGACCGAGCCCCCCCGTGACGCCCTTGACACGCTTGTGCATGGTGCTGC
CGATTTGGCGTCGTTGGAGGAGGTCCAGCAGACTGACTACATGCCATTCG
ACCCGACGGTAAAAAGGACGGAGGGAACCATTTCCTTGCCCACTGGCGAG
GCTTTTAAGGTGACAAAGGGCGCACCGCACGTAATTTTGAGCTTGTTGGA
CCAAAACTCACATGCCAGTGTGATTGAGCAATGTGAGAAGGATGTGGAGG
CTTTGGGCGAACGTGGCATCCGCTCTCTGGCAGTGGCCAAGACGAACGGA
GGAGTGGATGGAGCGTGGGAGATGGTGGGCCTGCTCACCTTCCTAGATCC
TCCCCGCCCCGATACCAAGGACACGATTGATAGGGCGAGGGGTTTTGGTG
TGGAGGTGAAGATGATCACGGGTGACCACTTACTGATTGCCAAGGAGACG
GCCCGCCAGCTCGGCATGGGCACCAACATCGAGAACGCCGCACAGCTACC
CAAATTGGATGAGGACCGCAAGCCGCCTAAGAATCTGATGGACCACTTCG
AGTACATCGAGGCTACGTCCGGTTTCGCTCAGGTCTTCCCGGAGCACAAG
TTTTTGATTGTCGAGGCTCTCCGTCGTGGTGGCTACAAGACGGGCATGAC
TGGTGATGGTGTTAATGATGCCCCTGCCCTACAGAGGGCCGATGTGGGTG
TTGCCGTGCAGGGCTCCACCGACGCTGCCCGTGCCGCTGCTGATATTGTG
TTGACCAAGCCCGGCCTCTCCACCATCGTCACGGCCATCGTCGTGGCTCG
TACCGTGTTCGGGCGGATGACATCTTTCATCACCTACCGTATCGCCGCCA
CGCTTCAGCTGCTGGTATTCTTCTTCATCGCCGTGCTCACGATGCAGCCT
TCCAAGTTCCAGCCCGCGGGCGCCGTCGACGAGTGGCCTGCATTCTTCCA
CATGCCCGTGATGATGCTCATGCTTATCACCCTCCTCAACGACGGCACGC
TCATCTCCATTGGCTACGACAACGTGGTGCCCAACACCACTCCCGACAAG
TGGAATCTCAAGGTGCTCTTTACCATCGCCGGTGTGCTCGGCGGCGTGGC
CTGCCTCTCCTCCCTGGCCATGCTCTGGGTCGCCCTCAACTGTCACGAGC
CCAACGGCGTGTGGGCTGGTCTCGGCCTGGCCCCCTTGACCTACGGACAG
ATCACCTCCATGGTGTACCTCAAGGTCTCCATCTCCGATTTCTTGACTCT
CTTCTCCTCCCGCTCAGGCGCCGGCTTTTTCTGGACCAACAAGCCCTCCA
AGATCCTCTTGATCGCTGCTGGTATTGCCTGCTCCCTGTCCACCATCATG
GCGAATGCCTGGCCCGAGTCCATGCCTGACGGCGTGCCTACAGTGGGCAT
GGCCCGTGCCGAGCCTCGCGAGCTGTCTGTGATCGTGTGGGTCTACTGCT
TGATCTGCTGGTTCATCCAGGACGCCGCCAAGGTGGGGATGTACGCGCTG
CTGAAGAGATACAATACATTCGGGATCAATGATATTGTCGCTATGAAGAA
GGTGGACCCATCGACGAAGGTTTAAGTTTTCAAATTGGCGGAGAAGGAGG
GAGGAGTAAGGGAGTAAGGGATGGATGGATGTGCATATGTGTTTTTGCCC
CTTGTTGGGCGTTGCCTTTCTATCCTGCTTTTGAAGAGCTGGCGATTCTA
TGTGTTGGTTATATAATTAAGCATGATTCGCTTGTGGGAAGGAAGTCATG
CGACACTTGGAGGGGGGCGAAACGGCTCAAAACAACCATTGTCGAAGGTT
CGAGTCCGAAGAAAAAGAGAATTACGATGATGATCTGTGTGTGTGAATTT
TGATTTTGACGATAACTGGCTCAGTAGCAGTAGCAAGGAAGCTATAGGCA
TAGTAGCAGTAGCAGCAGAATTGGCTGGAGCAGCATCAGCGTGAGTAGTG
ATTGCGGAATATTTATGGGAATTGGATGGGAAAGAACGGTCTACAGGCAG
GCCGTACCATGCCGGAAGTACATAGAGTGAAGGATGATGGTATATGCGCT
TGAAGTGAAGAACTATTATTGAGTCTTGAAAGAGGGAATAGGGCGGAAAC
AGGAGAGTGGTTGGTAGGTTTACCACAGCAAGGCTGCGAAGATGGTGTCC
GCTTTTGCTGATCGCGCCACCGCCACTCGTACAGAAAGAACAAAGTCACA
AAATACTCGAGTCGGTTGTTACGTACGTTACTCGAATCTTTTCCCCCTTT
CTTTTAATCAATAAAACTTGTTCATGGTCATTCGTTCAAGCGTCATCATT
CTCATTTTCACAAGCTTTTTTGCAATGCCTCTACGAGCGCCACCGTGTCC
TGAAGCAACCCCAAGGGCTCGCTCAGATCAGGTGGAGCCCTCCCAGAAGC
CAACGCCGACACTTGCTGCTTATCCAGCGAGTTGAAAAAGATCACCCGGT
TCGAAAAGGCGTAATCTACCAGCTGCTGCAACGCCACGCCTGCTTCTTGC
CGTCCTTCCTCCAAGGCCTTGCTTGCCTGCTTGTCCCCACCTATGGCCTC
TGCCAGCCCCGCAGGTGTGCCGTAGCCGAGATAAGGCATAAAGAGGGTAT
TAAGAGGCTTCTTCTTCGTAGCTGCTAGTACGTCATCCCACCCCTCGATC
TTTATCATGGGGATAAGCGAGCCCAACGTTTCTTGAATGTTGCTAAGGAG
CTGCTTGGGGTCCGCTGGGATAGTCACGTCGGTGTCTGTGGATGCAGCTG
CAGCACGTTCAGCCCTCGCATCTTGTTGCTTCTGCTTTCTGGTGCTCATG
ATATAGTTATTGGTCTTAGGCTGCGCGCCCTCCCCACCGTAATACTCTTG
GAAGGTGGGGACGGCGGCATTGGTTGGGTGTGTGGTAAGGAGAAGGAGAC
CAGCAGCAGCGGCGACGGATTGAAGGGTGCCAGCTCTGCTGATGCTTCCG
TCGCCTCTACCATCGGCGGCGGACAGAAGTGTTGACGAGGAAAATTGCGA
TGGAAAGGTGGGGAGGACGAAAGCCGTCGCGCTAAGAGGTGGGAATGCTA
GGACGACGAGGACGAGGAAGAGCAAGAGACGAAGCAGGAACGGCGGGCTT
CGACCATTCGCATTTGCTTGTAGTGGTTGGTGGTATCTATGGAGCGGCAC
CATATTCCTGTAGCGTACACCTGTCGTT
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protein sequence of NO12G00390.1

>NO12G00390.1-protein ID=NO12G00390.1-protein|Name=NO12G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=987bp
MNTLKNGAGRPSGQAPPTKALDSYDDEMDILKGEFFDDEGRMSTNAGMQS
EEDHLRDVQRTVQMVRSASIALSVRSQDSMGEGKSMSRMRSLRAVFSNSE
DKGEEETKVALDEMFDEGTMPVHMTRSKSVVNLDSEGLSSALAAELLKKF
GRNELPETKKPNWLIFLEQLYQPMPLMIWMAIIIEAAIESWPDMGILLAI
QFLNASLSYYETTKAGDAVAALKASLKPLAYVKRDGKFMQMDAALLVPGD
LVLLGAGGAVPADCVVKDSQIDVDQAALTGESLPVTMYKGDSCKMGSTVV
RGEVEATVEATGANTFFGRTASLLTGGDEVSNLQKLLMRIMIILVVLSMT
LCLIAFGYLLGRGETLREALSFTVVLLVASIPIAIEIVCTTTLALGSRQL
ARDGAIVSRLAAIEDMAGMSILCSDKTGTLTLNKMMIQEETPIYMEGETQ
YSALRLAAMASKWTEPPRDALDTLVHGAADLASLEEVQQTDYMPFDPTVK
RTEGTISLPTGEAFKVTKGAPHVILSLLDQNSHASVIEQCEKDVEALGER
GIRSLAVAKTNGGVDGAWEMVGLLTFLDPPRPDTKDTIDRARGFGVEVKM
ITGDHLLIAKETARQLGMGTNIENAAQLPKLDEDRKPPKNLMDHFEYIEA
TSGFAQVFPEHKFLIVEALRRGGYKTGMTGDGVNDAPALQRADVGVAVQG
STDAARAAADIVLTKPGLSTIVTAIVVARTVFGRMTSFITYRIAATLQLL
VFFFIAVLTMQPSKFQPAGAVDEWPAFFHMPVMMLMLITLLNDGTLISIG
YDNVVPNTTPDKWNLKVLFTIAGVLGGVACLSSLAMLWVALNCHEPNGVW
AGLGLAPLTYGQITSMVYLKVSISDFLTLFSSRSGAGFFWTNKPSKILLI
AAGIACSLSTIMANAWPESMPDGVPTVGMARAEPRELSVIVWVYCLICWF
IQDAAKVGMYALLKRYNTFGINDIVAMKKVDPSTKV*
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mRNA from alignment at chr12:141260..146773+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO12G00390.1 ID=NO12G00390.1|Name=NO12G00390.1|organism=Nannochloropsis oceanica|type=mRNA|length=5514bp|location=Sequence derived from alignment at chr12:141260..146773+ (Nannochloropsis oceanica)
CAGAAGCCTTTCGCCCGTCAAGGCGGATGGCCAACGCGGCAAGCATAGTG TCTAGTGCTAGTGCCAGATATTCTTTGACACGCGGGTCGCACCAACAAGG TATGGAATGTGAAAACGGCCTGAACAGGAGTCTCGGCCGGACGCGGAAAC GGATCAGTGAATATTCGGTAATTCTTCTTCACTTTGCTCCAGCCTGCCCA TTATAGCAGCATGGCTGTGCTTTTCCTTGTGTGCTTGTTAAAAATGGCTG TTTTTTTTTGTCACTAGGCTACTGGAATGATTTTAGCACACTCGTCTGGT CTTTCCATGGACTTTGGCTTCGTCAAAGCGCAGGGATGTCGCGTGGCAAG CAGATGCGGGTATTTACGCAGGCGGACATTGCTTGTCCAATCCCAAGCCC AGGAGCGACAATTCAGGTCGTACCGTTCAGTGCTTTTGAGACTTGAATAT TATTCGATCTTTCATCGTGACTTTTTGGTGAACTTCTCACCAGAATACAC ACGCACTAGACATCATGAACACTCTCAAGAACGGTGCTGGGAGGCCGAGC GGGCAAGCGCCGCCGACCAAGGCGCTTGATTCCTACGATGACGAAATGGA TATTCTCAAGGGCGAATTTTTCGACGACGAGGGCCGTATGTCTACAAATG CCGGCATGCAGTCTGAAGAAGATCATCTGCGTGACGTGCAGCGGTAAGTC ATTGTAATCGGTGACAGTGAACGAGGGAGGGGGGGGGGGGGTTGGGGAGG TAGGTAAGGATTTAGCATAGGGAGGAGGAATTCCACCTTTCAATCCATGA CACTGTGCGCACCAACACACTTATGTCCCTTATTTATTTCCATTGATTGG TTTAAATCCGCGCATAGCACCGTGCAAATGGTCCGTAGCGCCTCCATTGC CTTGAGCGTACGCTCGCAGGACTCCATGGGCGAAGGAAAATCCATGTCTC GGATGCGAAGCTTGCGTGCCGTCTTCTCCAACAGCGAGGACAAGGGGGAA GAGGAAACCAAGGTGGCATTGGACGAGATGTTCGACGAGGGCACCATGCC TGTACACATGACCCGTAGCAAATCCGTCGTCAACCTAGACTCCGAAGGCC TCTCCTCCGCCTTGGCAGCCGAGCTCCTAAAAAAATTCGGCCGCAACGAG CTACCCGAGACCAAAAAGCCCAACTGGCTCATTTTCCTGGAACAGCTGTA CCAGCCCATGCCCCTCATGATCTGGATGGCCATCATCATCGAGGCCGCCA TCGAGTCCTGGCCTGACATGGGCATCCTTCTGGCCATCCAGTTCCTGAAC GCCTCCCTGTCCTACTACGAGACCACCAAGGCCGGCGACGCCGTCGCTGC GCTCAAGGCCTCCCTCAAGCCGCTGGCATATGTGAAGCGGGACGGGAAGT TTATGCAAATGGATGCGGCGCTGCTGGTGCCCGGTGACTTGGTGCTGCTC GGGGCGGGTGGAGCTGTACCTGCTGACTGTGTGGTCAAAGACTCCCAGAT CGATGTGGACCAGGTACGATAGCAAACATTTTATCTTTCCTGCTTCAATC CTTCTTCCTGTTTCTATTCCCCCTTGTCGCAAATCCATTGACTCCCACCC TTTCCTCCCTCTCTCACTGCTTGTCACCCTCGCCATAGGCTGCCCTGACT GGGGAGTCGCTTCCCGTGACCATGTACAAGGGCGACTCTTGCAAGATGGG CTCTACCGTCGTGCGTGGTGAGGTCGAGGCTACCGTGGAGGCCACGGGCG CCAACACCTTCTTCGGCCGTACTGCATCCCTGCTCACAGGTGGGGACGAG GTGTCCAACCTTCAGAAGCTGCTGATGCGCATCATGATTATTCTCGTCGT GCTGTCCATGACTCTGTGCCTGATTGCTTTCGGCTACCTGCTCGGCCGCG GAGAGACCCTGCGTGAGGCTCTGTCGTTCACCGTCGTGCTGCTGGTCGCC TCCATCCCCATCGCCATCGAGATTGTCTGCACCACCACTCTGGCCCTGGG CTCCCGGCAACTGGCTAGAGACGGTGCCATCGTCTCTCGTCTGGCCGCCA TCGAGGACATGGCTGGCATGTCTATTCTGTGCTCCGACAAGACCGGCACC TTGACCCTTAACAAGATGATGATCCAAGAGGAGACCCCTATTTACATGGA GGGCGAGACCCAGTACTCGGCTTTGCGTCTTGCGGCCATGGCCTCCAAGT GGACCGAGCCCCCCCGTGACGCCCTTGACACGCTTGTGCATGGTGCTGCC GATTTGGCGTCGTTGGAGGAGGTCCAGCAGACTGACTACATGCCATTCGA CCCGACGGTAAAAAGGACGGAGGGAACCATTTCCTTGCCCACTGGCGAGG CTTTTAAGGTGACAAAGGGCGCACCGCACGTAATTTTGAGCTTGTTGGAC CAAAACTCACATGCCAGTGTGATTGAGCAATGTGAGAAGGATGTGGAGGC TTTGGGCGAACGTGGCATCCGCTCTCTGGCAGTGGCCAAGACGAACGGAG GAGTGGATGGAGCGTGGGAGATGGTGGGCCTGCTCACCTTCCTAGATCCT CCCCGCCCCGATACCAAGGACACGATTGATAGGGCGAGGGGTTTTGGTGT GGAGGTGAAGATGATCACGGGTGACCACTTACTGATTGCCAAGGAGACGG CCCGCCAGCTCGGCATGGGCACCAACATCGAGAACGCCGCACAGCTACCC AAATTGGATGAGGACCGCAAGCCGCCTAAGAATCTGATGGACCACTTCGA GTACATCGAGGCTACGTCCGGTTTCGCTCAGGTCTTCCCGGAGCACAAGT TTTTGATTGTCGAGGCTCTCCGTCGTGGTGGCTACAAGGTATGTCGGTGC ATCTTGAATTGTCCCTCTCTCTCTCCTTTGGTCCCTCAGTGTTGCTTGCT TTGGTGTTGTCTAGTTCTTATCTTACAGCTTTCACACATACTCTGTTCCT TTTCTTTCCGTCCTCCCTCCCTTAGACGGGCATGACTGGTGATGGTGTTA ATGATGCCCCTGCCCTACAGAGGGCCGATGTGGGTGTTGCCGTGCAGGGC TCCACCGACGCTGCCCGTGCCGCTGCTGATATTGTGTTGACCAAGCCCGG CCTCTCCACCATCGTCACGGCCATCGTCGTGGCTCGTACCGTGTTCGGGC GGATGACATCTTTCATCACCTACCGTATCGCCGCCACGCTTCAGCTGCTG GTATTCTTCTTCATCGCCGTGCTCACGATGCAGCCTTCCAAGTTCCAGCC CGCGGGCGCCGTCGACGAGTGGCCTGCATTCTTCCACATGCCCGTGATGA TGCTCATGCTTATCACCCTCCTCAACGACGGCACGCTCATCTCCATTGGC TACGACAACGTGGTGCCCAACACCACTCCCGACAAGTGGAATCTCAAGGT GCTCTTTACCATCGCCGGTGTGCTCGGCGGCGTGGCCTGCCTCTCCTCCC TGGCCATGCTCTGGGTCGCCCTCAACTGTCACGAGCCCAACGGCGTGTGG GCTGGTCTCGGCCTGGCCCCCTTGACCTACGGACAGATCACCTCCATGGT GTACCTCAAGGTCTCCATCTCCGATTTCTTGACTCTCTTCTCCTCCCGCT CAGGCGCCGGCTTTTTCTGGACCAACAAGCCCTCCAAGATCCTCTTGATC GCTGCTGGTATTGCCTGCTCCCTGTCCACCATCATGGCGAATGCCTGGCC CGAGTCCATGCCTGACGGCGTGCCTACAGTGGGCATGGCCCGTGCCGAGC CTCGCGAGCTGTCTGTGATCGTGTGGGTCTACTGCTTGATCTGCTGGTTC ATCCAGGACGCCGCCAAGGTGGGGATGTACGCGCTGCTGAAGAGATACAA TACATTCGGGATCAATGATATTGTCGCTATGAAGAAGGTGGACCCATCGA CGAAGGTTTAAGTTTTCAAATTGGCGGAGAAGGAGGGAGGAGTAAGGGAG TAAGGGATGGATGGATGTGCATATGTGTTTTTGCCCCTTGTTGGGCGTTG CCTTTCTATCCTGCTTTTGAAGAGCTGGCGATTCTATGTGTTGGTTATAT AATTAAGCATGATTCGCTTGTGGGAAGGAAGTCATGCGACACTTGGAGGG GGGCGAAACGGCTCAAAACAACCATTGTCGAAGGTTCGAGTCCGAAGAAA AAGAGAATTACGATGATGATCTGTGTGTGTGAATTTTGATTTTGACGATA ACTGGCTCAGTAGCAGTAGCAAGGAAGCTATAGGCATAGTAGCAGTAGCA GCAGAATTGGCTGGAGCAGCATCAGCGTGAGTAGTGATTGCGGAATATTT ATGGGAATTGGATGGGAAAGAACGGTCTACAGGCAGGCCGTACCATGCCG GAAGTACATAGAGTGAAGGATGATGGTATATGCGCTTGAAGTGAAGAACT ATTATTGAGTCTTGAAAGAGGGAATAGGGCGGAAACAGGAGAGTGGTTGG TAGGTTTACCACAGCAAGGCTGCGAAGATGGTGTCCGCTTTTGCTGATCG CGCCACCGCCACTCGTACAGAAAGAACAAAGTCACAAAATACTCGAGTCG GTTGTTACGTACGTTACTCGAATCTTTTCCCCCTTTCTTTTAATCAATAA AACTTGTTCATGGTCATTCGTTCAAGCGTCATCATTCTCATTTTCACAAG CTTTTTTGCAATGCCTCTACGAGCGCCACCGTGTCCTGAAGCAACCCCAA GGGCTCGCTCAGATCAGGTGGAGCCCTCCCAGAAGCCAACGCCGACACTT GCTGCTTATCCAGCGAGTTGAAAAAGATCACCCGGTTCGAAAAGGCGTAA TCTACCAGCTGCTGCAACGCCACGCCTGCTTCTTGCCGTCCTTCCTCCAA GGCCTTGCTTGCCTGCTTGTCCCCACCTATGGCCTCTGCCAGCCCCGCAG GTGTGCCGTAGCCGAGATAAGGCATAAAGAGGGTATTAAGAGGCTTCTTC TTCGTAGCTGCTAGTACGTCATCCCACCCCTCGATCTTTATCATGGGGAT AAGCGAGCCCAACGTTTCTTGAATGTTGCTAAGGAGCTGCTTGGGGTCCG CTGGGATAGTCACGTCGGTGTCTGTGGATGCAGCTGCAGCACGTTCAGCC CTCGCATCTTGTTGCTTCTGCTTTCTGGTGCTCATGATATAGTTATTGGT CTTAGGCTGCGCGCCCTCCCCACCGTAATACTCTTGGAAGGTGGGGACGG CGGCATTGGTTGGGTGTGTGGTAAGGAGAAGGAGACCAGCAGCAGCGGCG ACGGATTGAAGGGTGCCAGCTCTGCTGATGCTTCCGTCGCCTCTACCATC GGCGGCGGACAGAAGTGTTGACGAGGAAAATTGCGATGGAAAGGTGGGGA GGACGAAAGCCGTCGCGCTAAGAGGTGGGAATGCTAGGACGACGAGGACG AGGAAGAGCAAGAGACGAAGCAGGAACGGCGGGCTTCGACCATTCGCATT TGCTTGTAGTGGTTGGTGGTATCTATGGAGCGGCACCATATTCCTGTAGC GTACACCTGTCGTT
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Coding sequence (CDS) from alignment at chr12:141260..146773+

>NO12G00390.1 ID=NO12G00390.1|Name=NO12G00390.1|organism=Nannochloropsis oceanica|type=CDS|length=2961bp|location=Sequence derived from alignment at chr12:141260..146773+ (Nannochloropsis oceanica)
ATGAACACTCTCAAGAACGGTGCTGGGAGGCCGAGCGGGCAAGCGCCGCC
GACCAAGGCGCTTGATTCCTACGATGACGAAATGGATATTCTCAAGGGCG
AATTTTTCGACGACGAGGGCCGTATGTCTACAAATGCCGGCATGCAGTCT
GAAGAAGATCATCTGCGTGACGTGCAGCGCACCGTGCAAATGGTCCGTAG
CGCCTCCATTGCCTTGAGCGTACGCTCGCAGGACTCCATGGGCGAAGGAA
AATCCATGTCTCGGATGCGAAGCTTGCGTGCCGTCTTCTCCAACAGCGAG
GACAAGGGGGAAGAGGAAACCAAGGTGGCATTGGACGAGATGTTCGACGA
GGGCACCATGCCTGTACACATGACCCGTAGCAAATCCGTCGTCAACCTAG
ACTCCGAAGGCCTCTCCTCCGCCTTGGCAGCCGAGCTCCTAAAAAAATTC
GGCCGCAACGAGCTACCCGAGACCAAAAAGCCCAACTGGCTCATTTTCCT
GGAACAGCTGTACCAGCCCATGCCCCTCATGATCTGGATGGCCATCATCA
TCGAGGCCGCCATCGAGTCCTGGCCTGACATGGGCATCCTTCTGGCCATC
CAGTTCCTGAACGCCTCCCTGTCCTACTACGAGACCACCAAGGCCGGCGA
CGCCGTCGCTGCGCTCAAGGCCTCCCTCAAGCCGCTGGCATATGTGAAGC
GGGACGGGAAGTTTATGCAAATGGATGCGGCGCTGCTGGTGCCCGGTGAC
TTGGTGCTGCTCGGGGCGGGTGGAGCTGTACCTGCTGACTGTGTGGTCAA
AGACTCCCAGATCGATGTGGACCAGGCTGCCCTGACTGGGGAGTCGCTTC
CCGTGACCATGTACAAGGGCGACTCTTGCAAGATGGGCTCTACCGTCGTG
CGTGGTGAGGTCGAGGCTACCGTGGAGGCCACGGGCGCCAACACCTTCTT
CGGCCGTACTGCATCCCTGCTCACAGGTGGGGACGAGGTGTCCAACCTTC
AGAAGCTGCTGATGCGCATCATGATTATTCTCGTCGTGCTGTCCATGACT
CTGTGCCTGATTGCTTTCGGCTACCTGCTCGGCCGCGGAGAGACCCTGCG
TGAGGCTCTGTCGTTCACCGTCGTGCTGCTGGTCGCCTCCATCCCCATCG
CCATCGAGATTGTCTGCACCACCACTCTGGCCCTGGGCTCCCGGCAACTG
GCTAGAGACGGTGCCATCGTCTCTCGTCTGGCCGCCATCGAGGACATGGC
TGGCATGTCTATTCTGTGCTCCGACAAGACCGGCACCTTGACCCTTAACA
AGATGATGATCCAAGAGGAGACCCCTATTTACATGGAGGGCGAGACCCAG
TACTCGGCTTTGCGTCTTGCGGCCATGGCCTCCAAGTGGACCGAGCCCCC
CCGTGACGCCCTTGACACGCTTGTGCATGGTGCTGCCGATTTGGCGTCGT
TGGAGGAGGTCCAGCAGACTGACTACATGCCATTCGACCCGACGGTAAAA
AGGACGGAGGGAACCATTTCCTTGCCCACTGGCGAGGCTTTTAAGGTGAC
AAAGGGCGCACCGCACGTAATTTTGAGCTTGTTGGACCAAAACTCACATG
CCAGTGTGATTGAGCAATGTGAGAAGGATGTGGAGGCTTTGGGCGAACGT
GGCATCCGCTCTCTGGCAGTGGCCAAGACGAACGGAGGAGTGGATGGAGC
GTGGGAGATGGTGGGCCTGCTCACCTTCCTAGATCCTCCCCGCCCCGATA
CCAAGGACACGATTGATAGGGCGAGGGGTTTTGGTGTGGAGGTGAAGATG
ATCACGGGTGACCACTTACTGATTGCCAAGGAGACGGCCCGCCAGCTCGG
CATGGGCACCAACATCGAGAACGCCGCACAGCTACCCAAATTGGATGAGG
ACCGCAAGCCGCCTAAGAATCTGATGGACCACTTCGAGTACATCGAGGCT
ACGTCCGGTTTCGCTCAGGTCTTCCCGGAGCACAAGTTTTTGATTGTCGA
GGCTCTCCGTCGTGGTGGCTACAAGACGGGCATGACTGGTGATGGTGTTA
ATGATGCCCCTGCCCTACAGAGGGCCGATGTGGGTGTTGCCGTGCAGGGC
TCCACCGACGCTGCCCGTGCCGCTGCTGATATTGTGTTGACCAAGCCCGG
CCTCTCCACCATCGTCACGGCCATCGTCGTGGCTCGTACCGTGTTCGGGC
GGATGACATCTTTCATCACCTACCGTATCGCCGCCACGCTTCAGCTGCTG
GTATTCTTCTTCATCGCCGTGCTCACGATGCAGCCTTCCAAGTTCCAGCC
CGCGGGCGCCGTCGACGAGTGGCCTGCATTCTTCCACATGCCCGTGATGA
TGCTCATGCTTATCACCCTCCTCAACGACGGCACGCTCATCTCCATTGGC
TACGACAACGTGGTGCCCAACACCACTCCCGACAAGTGGAATCTCAAGGT
GCTCTTTACCATCGCCGGTGTGCTCGGCGGCGTGGCCTGCCTCTCCTCCC
TGGCCATGCTCTGGGTCGCCCTCAACTGTCACGAGCCCAACGGCGTGTGG
GCTGGTCTCGGCCTGGCCCCCTTGACCTACGGACAGATCACCTCCATGGT
GTACCTCAAGGTCTCCATCTCCGATTTCTTGACTCTCTTCTCCTCCCGCT
CAGGCGCCGGCTTTTTCTGGACCAACAAGCCCTCCAAGATCCTCTTGATC
GCTGCTGGTATTGCCTGCTCCCTGTCCACCATCATGGCGAATGCCTGGCC
CGAGTCCATGCCTGACGGCGTGCCTACAGTGGGCATGGCCCGTGCCGAGC
CTCGCGAGCTGTCTGTGATCGTGTGGGTCTACTGCTTGATCTGCTGGTTC
ATCCAGGACGCCGCCAAGGTGGGGATGTACGCGCTGCTGAAGAGATACAA
TACATTCGGGATCAATGATATTGTCGCTATGAAGAAGGTGGACCCATCGA
CGAAGGTTTAA
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Synonyms
Publications