NO12G00380.1, NO12G00380.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G00380.1
Unique Name	NO12G00380.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3548
Alignment location	chr12:136564..140731 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:136564..140731 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G00380.1 vs.
Match: XP_005855732.1 (H+-transporting ATPase [Nannochloropsis gaditana CCMP526]; EKU20624.1 H+-transporting ATPase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1680.6 bits (4351), Expect = 0.000e+0
Identity = 862/967 (89.14%), Postives = 910/967 (94.11%), Query Frame = 0

Query:    1 MSKTPAVSNKSIGKSIHAPGDHTHVSDTFYDHEGRLAKKSNRMGNLENEDHDRALERTMREVNKASIALTLRSQGSLGRGEGAAPGLDGVFSKPEA-APIHIDTDENDPEIHHLHSDGLSSALAAELLKKFGRNELPEKKKPKWKIFAEQLYQPMPLMIWMAIIIEAAIESWPDMGILLAIQFLNASLSYYETTKAGDAVAALKASLKPVAYVKRDGKFASMDAALLVPGDLVLLGSGGAVPADCVVMDSQIDVDQAALTGESLPVTMYKGDSCKMGSTVVRGEVEATVEATGANTFFGRTAALLVGGDEVSNLQKLLIRIMIILVVLSMTLCLIAFGYLLGRGETLREALSFTVVLLVASIPIAIEIVCTTTLALGSHELSKDGAIVSRLAAIEDMAGMSILCSDKTGTLTLNKMAIQEETPIYMEGETQYSLLRYAAMASKWTEPPRDALDTLVHGSADLKSLDSIKQTDYMPFDPTVKRTEGTVQLPTGETFKVSKGAPHIIMHLVDQEANAAIIAQCDKDVEALGERGIRSLAVAKTKGSADGPWEMVGLLTFLDPPRPDTKDTIERANKFGVEVKMITGDHLLIAKETARQLGMATNIENAALLPKLEEDGKPPKNLMDFFKYIEATAGFAQVFPEHKFLIVEALRRGGYKTGMTGDGVNDAPALKRADVGVAVQGSTDAARAAADIVLTKPGLSTIVTAIVVARTVFGRMTSFITYRIAATLQLLVFFFIAVLTMQPAKFQPAGAVDEWPAFFHMPVMMLMLITLLNDGTLISIGYDNVVPNTTPDKWNLKVLFTVSGVLGGVACLSSLAMLWVALNCHEPNGVWAGLGLAPLTYGQITSMVYLKVSISDFLTLFSSRSGAGFFWTNKPSKILLIAAGVACSLSTIMANAWPESMPDGVPTVGMARAEPRELSAIVWVYCLICWFIQDAAKVGTYALLKKNNTFGINDIVKMHKEDPLENA 967
            M+   A  N+SIGK      +H H+SD+FY+HEGRLAKKSNR+GN+EN+DH+RALERTMR VN ASIA+TLRSQGSLG GEG+APGLDGVF+K E  APIHIDTDENDPEIHHLHS+GLSSALAAELLKKFGRNELPEKKKPKW IFAEQLYQPMPLMIW AIIIEAAIESWPDMGILLAIQF+NASLSYYETTKAGDAVAALKASLKPVAYVKRDGKF SMDAALLVPGDLVLLGSGGAVPADCVVMDSQIDVDQAALTGESLPVTM+KGDS KMGSTVVRGEVEATVEATGANTFFGRTA+LL GGDEVSNLQKLLIRIMIILVVLSM LC IAFGYLLGRGET+RE+LSFTVVLLVASIPIAIEIVCTTTLALGS EL+KDGAIVSRLAAIEDMAGMSILCSDKTGTLTLNKM IQEETPIY+EGETQYSLLRYAAMASKWTEPPRDALDTLVHG+AD+ SL SIKQ DYMPFDPT+KRTEGTVQLP+GETFKVSKGAPHIIMHLVDQE +AA +AQCDKDVEALGERGIRSLAVAKTKGSADGPWE++GLLTFLDPPRPDTKDTIERANKFGVEVKMITGDHLLIAKETARQL M T IENAALLPKLEEDGKPPKNLMD+FKYIEAT+GFAQVFPEHKFLIVEALRRGGYKTGMTGDGVNDAPALKRADVGVAVQGSTDAARAAADIVLTKPGLSTIVTAI+VARTVFGRMTSFITYRIAATLQLL+FFFIAVLTMQPAK++PAGA++EWPAFFHMPVMMLMLITLLNDGTLISIGYDNVVPNTTPDKWNLKVLFT++GVLGGVA LSSL MLWVALN H P G+WA  GLA LTYGQITSMVYLKVSISDFLTLFSSRSGAGFFWTNKPS ILL+AAG+ACSLSTIMANAWPES PDGVPT+G+AR  P+ELS  VW+YCL+CWFIQDAAKVG YA LKK N FGINDIV M K DP+E A
Sbjct:  435 MASKCASENRSIGKG--NKDEHGHMSDSFYNHEGRLAKKSNRIGNMENDDHERALERTMRAVNSASIAVTLRSQGSLGHGEGSAPGLDGVFAKQEPEAPIHIDTDENDPEIHHLHSEGLSSALAAELLKKFGRNELPEKKKPKWLIFAEQLYQPMPLMIWAAIIIEAAIESWPDMGILLAIQFMNASLSYYETTKAGDAVAALKASLKPVAYVKRDGKFLSMDAALLVPGDLVLLGSGGAVPADCVVMDSQIDVDQAALTGESLPVTMFKGDSVKMGSTVVRGEVEATVEATGANTFFGRTASLLSGGDEVSNLQKLLIRIMIILVVLSMALCGIAFGYLLGRGETVRESLSFTVVLLVASIPIAIEIVCTTTLALGSRELAKDGAIVSRLAAIEDMAGMSILCSDKTGTLTLNKMMIQEETPIYVEGETQYSLLRYAAMASKWTEPPRDALDTLVHGAADMASLASIKQLDYMPFDPTIKRTEGTVQLPSGETFKVSKGAPHIIMHLVDQEVHAATVAQCDKDVEALGERGIRSLAVAKTKGSADGPWELIGLLTFLDPPRPDTKDTIERANKFGVEVKMITGDHLLIAKETARQLSMGTTIENAALLPKLEEDGKPPKNLMDYFKYIEATSGFAQVFPEHKFLIVEALRRGGYKTGMTGDGVNDAPALKRADVGVAVQGSTDAARAAADIVLTKPGLSTIVTAIIVARTVFGRMTSFITYRIAATLQLLIFFFIAVLTMQPAKYEPAGALEEWPAFFHMPVMMLMLITLLNDGTLISIGYDNVVPNTTPDKWNLKVLFTIAGVLGGVALLSSLLMLWVALNSHNPAGIWAQAGLAGLTYGQITSMVYLKVSISDFLTLFSSRSGAGFFWTNKPSAILLVAAGIACSLSTIMANAWPESRPDGVPTIGLARVAPKELSLYVWIYCLLCWFIQDAAKVGVYAFLKKYNIFGINDIVAMKKADPVEMA 1399

The following BLAST results are available for this feature:

BLAST of NO12G00380.1 vs.

BLAST of NO12G00380.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005855732.1	0.000e+0	89.14	H+-transporting ATPase [Nannochloropsis gaditana C...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G00380	NO12G00380	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00380.1	NO12G00380.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00380.1.cds1	NO12G00380.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00380.1.cds2	NO12G00380.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00380.1.cds3	NO12G00380.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00380.1.cds4	NO12G00380.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00380.1.cds5	NO12G00380.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:136564..140731+
coding sequence from alignment at chr12:136564..140731+

mRNA sequence

>NO12G00380.1 ID=NO12G00380.1|Name=NO12G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=3548bp
ATGTCCAAGACCCCCGCGGTGAGCAACAAGTCCATCGGCAAGAGCATCCA
TGCTCCGGGCGACCACACCCATGTCTCCGACACCTTTTACGACCACGAAG
GCCGTCTGGCCAAGAAGTCCAACCGTATGGGTAACCTGGAGAACGAGGAC
CACGACCGCGCCCTGGAGCGCACCATGCGGGAGGTGAACAAGGCCTCCAT
TGCTTTGACACTTCGCTCCCAAGGCTCCTTGGGACGTGGAGAGGGGGCCG
CCCCCGGCTTGGACGGCGTCTTCTCCAAGCCCGAAGCTGCTCCCATCCAC
ATCGACACGGACGAGAATGACCCCGAGATCCACCACTTGCACTCCGACGG
TCTCTCTTCCGCCCTGGCTGCCGAGCTGCTTAAGAAGTTTGGCCGCAACG
AGCTCCCCGAGAAGAAGAAGCCCAAGTGGAAGATTTTCGCCGAGCAGTTG
TACCAGCCCATGCCTCTCATGATCTGGATGGCCATCATCATCGAGGCCGC
CATCGAGTCCTGGCCTGACATGGGCATCCTTCTGGCCATCCAGTTCCTGA
ACGCCTCCCTGTCCTACTACGAGACCACCAAGGCCGGCGACGCCGTCGCT
GCGCTCAAGGCCTCCCTGAAGCCCGTGGCATATGTGAAGCGTGACGGAAA
GTTCGCTTCCATGGACGCCGCCCTCCTCGTGCCCGGTGACTTGGTGCTGC
TCGGCTCGGGTGGTGCCGTCCCGGCTGACTGTGTGGTCATGGACTCCCAG
ATCGATGTGGACCAGGCTGCCCTGACTGGGGAGTCGCTTCCCGTGACCAT
GTACAAGGGCGACTCTTGCAAGATGGGCTCTACCGTCGTGCGTGGTGAGG
TCGAGGCTACCGTGGAGGCCACGGGCGCCAACACCTTCTTCGGCCGCACT
GCTGCTTTGCTTGTGGGTGGTGACGAGGTGTCCAACCTTCAGAAGCTGCT
GATTCGCATCATGATTATTCTCGTCGTGCTGTCCATGACTCTGTGCCTGA
TTGCTTTCGGCTACCTGCTCGGCCGCGGAGAGACCCTGCGTGAGGCTCTG
TCGTTCACCGTCGTGCTGCTGGTCGCCTCAATCCCCATCGCCATCGAGAT
TGTCTGCACCACCACTCTGGCCCTGGGCTCCCACGAGCTCTCGAAGGACG
GCGCCATCGTCTCTCGTCTGGCCGCCATCGAGGACATGGCTGGCATGTCT
ATTCTGTGCTCCGACAAGACCGGCACCTTGACCCTTAACAAGATGGCAAT
TCAAGAGGAGACCCCTATTTACATGGAGGGCGAGACCCAGTACTCCCTCC
TTCGCTACGCGGCCATGGCCTCCAAGTGGACCGAGCCCCCCCGTGACGCC
CTTGACACGCTTGTGCACGGATCTGCGGACTTGAAGAGCCTGGATAGCAT
CAAACAGACTGACTACATGCCTTTTGACCCGACGGTCAAGCGCACGGAGG
GAACGGTGCAGCTTCCTACTGGCGAGACGTTCAAGGTTTCCAAGGGCGCG
CCGCACATCATCATGCACCTCGTGGACCAGGAGGCCAACGCCGCCATCAT
TGCGCAATGCGACAAGGACGTGGAGGCCCTCGGGGAGCGTGGCATCCGCT
CTCTGGCTGTGGCGAAGACCAAGGGCTCTGCTGACGGACCTTGGGAGATG
GTGGGTCTGCTCACTTTCCTTGACCCCCCCCGCCCCGACACCAAGGACAC
AATCGAGCGCGCCAACAAGTTCGGTGTGGAGGTGAAGATGATCACGGGTG
ACCATTTACTGATTGCTAAGGAGACGGCCCGCCAGCTCGGCATGGCTACC
AACATCGAGAACGCTGCATTATTGCCTAAGCTTGAGGAGGATGGCAAGCC
ACCTAAGAATCTGATGGACTTTTTCAAGTATATTGAGGCTACCGCCGGTT
TCGCCCAGGTCTTCCCGGAGCACAAGTTTTTGATCGTCGAGGCTCTCCGT
CGTGGTGGCTACAAGACGGGCATGACTGGTGATGGTGTTAATGATGCCCC
TGCCCTCAAGCGTGCGGATGTGGGTGTTGCCGTGCAGGGCTCCACCGACG
CTGCCCGTGCCGCTGCTGATATTGTGTTGACCAAGCCCGGCCTCTCCACC
ATCGTCACGGCCATCGTCGTGGCTCGTACCGTGTTCGGGCGGATGACATC
TTTCATCACCTACCGTATCGCCGCCACGCTTCAGCTGCTGGTATTCTTCT
TCATCGCCGTGCTCACGATGCAGCCTGCCAAGTTCCAGCCCGCGGGCGCC
GTCGACGAGTGGCCTGCATTCTTCCACATGCCCGTGATGATGCTCATGCT
TATCACCCTCCTCAACGACGGCACGCTCATCTCCATTGGCTACGACAACG
TGGTGCCCAACACCACTCCCGACAAGTGGAACCTCAAGGTGCTCTTCACC
GTATCTGGTGTGCTCGGCGGCGTGGCCTGCCTCTCCTCCCTGGCCATGCT
CTGGGTCGCCCTCAACTGTCACGAGCCCAACGGCGTGTGGGCTGGTCTCG
GTCTGGCCCCCTTGACCTACGGACAGATCACCTCCATGGTGTACCTCAAG
GTCTCCATCTCCGATTTCTTGACTCTCTTCTCCTCCCGCTCAGGCGCCGG
CTTTTTCTGGACCAATAAGCCCTCCAAGATCCTCTTGATCGCTGCTGGTG
TTGCCTGCTCCCTGTCCACCATCATGGCGAATGCCTGGCCTGAGTCCATG
CCTGACGGCGTGCCCACAGTGGGCATGGCCCGTGCCGAGCCTCGCGAGCT
GTCTGCGATCGTGTGGGTCTACTGCTTGATCTGCTGGTTCATCCAGGACG
CCGCCAAGGTGGGGACCTACGCTTTGCTGAAGAAGAACAACACCTTCGGC
ATCAACGACATCGTGAAGATGCACAAGGAAGATCCCTTGGAAAACGCTTA
AGCTGAAACTGACCTTACCCACTTTCCTGTGCAAAAAAGTGTAGCAGCAG
GAGTTAGATGTGATATGTGTCTTATATATACAAACGTGAGGCGGAACGCG
ACGCTGACCCCGCACGTGTGCCTGTGCGTGCATGTGTGTTCGTTTCCTCT
CGAATCTCTGTGTATGCGCGATGGATGTGTCGCGTGTGATGGACATGTAG
TCTAAGTGGTAGATAACTGTTCAATTTAATTTAATTAACTTTTCGCAGCG
ACTTAAGTATTCAGAAAGATTTAATGGCCCATCGGACTCGCCTCAATCCC
TATGCGAATGTCCTGCGTTAGCCAACATATTGGCCTGTGGAGAGAAGATG
TGAGAATGGAGGTGAGAGGAAAGACGGAGAGACGAGAAGCCATTCCGATG
ACATTTATTTGGGAAAGAAGTGACAGATTTCGAATTGACAAGAGCAACTA
CTTGTGAGTCGTTATCCTGTTAAAACCCTCTACAGCATGCATTAGAAAGA
GTTTGTGTTAGGATGCATATGGGGAACACGCGTAGATGCATTCAGGGCGA
TCAAAAAGTTAAAAGTGACGGAGCACTCCCGATAAGAGAATCAGAGCAGG
GCAGTTAGAGAGTGAGGACGCGACAAAAGAAATACCACTTGCAGTGAT

protein sequence of NO12G00380.1

>NO12G00380.1-protein ID=NO12G00380.1-protein|Name=NO12G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=967bp
MSKTPAVSNKSIGKSIHAPGDHTHVSDTFYDHEGRLAKKSNRMGNLENED
HDRALERTMREVNKASIALTLRSQGSLGRGEGAAPGLDGVFSKPEAAPIH
IDTDENDPEIHHLHSDGLSSALAAELLKKFGRNELPEKKKPKWKIFAEQL
YQPMPLMIWMAIIIEAAIESWPDMGILLAIQFLNASLSYYETTKAGDAVA
ALKASLKPVAYVKRDGKFASMDAALLVPGDLVLLGSGGAVPADCVVMDSQ
IDVDQAALTGESLPVTMYKGDSCKMGSTVVRGEVEATVEATGANTFFGRT
AALLVGGDEVSNLQKLLIRIMIILVVLSMTLCLIAFGYLLGRGETLREAL
SFTVVLLVASIPIAIEIVCTTTLALGSHELSKDGAIVSRLAAIEDMAGMS
ILCSDKTGTLTLNKMAIQEETPIYMEGETQYSLLRYAAMASKWTEPPRDA
LDTLVHGSADLKSLDSIKQTDYMPFDPTVKRTEGTVQLPTGETFKVSKGA
PHIIMHLVDQEANAAIIAQCDKDVEALGERGIRSLAVAKTKGSADGPWEM
VGLLTFLDPPRPDTKDTIERANKFGVEVKMITGDHLLIAKETARQLGMAT
NIENAALLPKLEEDGKPPKNLMDFFKYIEATAGFAQVFPEHKFLIVEALR
RGGYKTGMTGDGVNDAPALKRADVGVAVQGSTDAARAAADIVLTKPGLST
IVTAIVVARTVFGRMTSFITYRIAATLQLLVFFFIAVLTMQPAKFQPAGA
VDEWPAFFHMPVMMLMLITLLNDGTLISIGYDNVVPNTTPDKWNLKVLFT
VSGVLGGVACLSSLAMLWVALNCHEPNGVWAGLGLAPLTYGQITSMVYLK
VSISDFLTLFSSRSGAGFFWTNKPSKILLIAAGVACSLSTIMANAWPESM
PDGVPTVGMARAEPRELSAIVWVYCLICWFIQDAAKVGTYALLKKNNTFG
INDIVKMHKEDPLENA*

mRNA from alignment at chr12:136564..140731+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G00380.1 ID=NO12G00380.1|Name=NO12G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=4168bp|location=Sequence derived from alignment at chr12:136564..140731+ (Nannochloropsis oceanica)
ATGTCCAAGACCCCCGCGGTGAGCAACAAGTCCATCGGCAAGAGCATCCA
TGCTCCGGGCGACCACACCCATGTCTCCGACACCTTTTACGACCACGAAG
GCCGTCTGGCCAAGAAGTCCAACCGTATGGGTAACCTGGAGAACGAGGAC
CACGACCGCGCCCTGGAGCGGTAAGTCACTGTTGGGTTGGTGGTAGATAG
GAGCGACTGTGTTCAGAAAGTGAGCCAGGATCGCGTATCTTTTTGCAAAG
CCTACACCGAAGAGTCCTGTTCACCCCGCACTCTCACGGTACACCATCGG
CGCTCTCCGTAATCCCCTCTCCTGACTCCCTTTACCTCCATCCCTTCCCC
CTCCAGCACCATGCGGGAGGTGAACAAGGCCTCCATTGCTTTGACACTTC
GCTCCCAAGGCTCCTTGGGACGTGGAGAGGGGGCCGCCCCCGGCTTGGAC
GGCGTCTTCTCCAAGCCCGAAGCTGCTCCCATCCACATCGACACGGACGA
GAATGACCCCGAGATCCACCACTTGCACTCCGACGGTCTCTCTTCCGCCC
TGGCTGCCGAGCTGCTTAAGAAGTTTGGCCGCAACGAGCTCCCCGAGAAG
AAGAAGCCCAAGTGGAAGATTGTAAGTGCTTTTCTGCTTTTCCCTTTCCT
CAATGTCATGCATGCCAAGTTGTTTGATTTGTGTTAAAAATATGCCGGCG
TTGTCTTGTCTAAGCTTCGTGTCTGATGGTTTCGGGAGCTTGTACAGATA
TCCTCACGTGTACTCATTTTTTCCCCATTTTTCCCTGGCTTTCCTTCCCG
ACAGTTCGCCGAGCAGTTGTACCAGCCCATGCCTCTCATGATCTGGATGG
CCATCATCATCGAGGCCGCCATCGAGTCCTGGCCTGACATGGGCATCCTT
CTGGCCATCCAGTTCCTGAACGCCTCCCTGTCCTACTACGAGACCACCAA
GGCCGGCGACGCCGTCGCTGCGCTCAAGGCCTCCCTGAAGCCCGTGGCAT
ATGTGAAGCGTGACGGAAAGTTCGCTTCCATGGACGCCGCCCTCCTCGTG
CCCGGTGACTTGGTGCTGCTCGGCTCGGGTGGTGCCGTCCCGGCTGACTG
TGTGGTCATGGACTCCCAGATCGATGTGGACCAGGTACGATAGCAAAGGT
TCTCTGCCTAGTTGCATCCATTCCACTATTTATCCCCTTGTCGCAAATCC
ATTGACTCCCACCCTTTCCTCCCTCTCTCACTGCTTGTCACCCTCGCCAT
AGGCTGCCCTGACTGGGGAGTCGCTTCCCGTGACCATGTACAAGGGCGAC
TCTTGCAAGATGGGCTCTACCGTCGTGCGTGGTGAGGTCGAGGCTACCGT
GGAGGCCACGGGCGCCAACACCTTCTTCGGCCGCACTGCTGCTTTGCTTG
TGGGTGGTGACGAGGTGTCCAACCTTCAGAAGCTGCTGATTCGCATCATG
ATTATTCTCGTCGTGCTGTCCATGACTCTGTGCCTGATTGCTTTCGGCTA
CCTGCTCGGCCGCGGAGAGACCCTGCGTGAGGCTCTGTCGTTCACCGTCG
TGCTGCTGGTCGCCTCAATCCCCATCGCCATCGAGATTGTCTGCACCACC
ACTCTGGCCCTGGGCTCCCACGAGCTCTCGAAGGACGGCGCCATCGTCTC
TCGTCTGGCCGCCATCGAGGACATGGCTGGCATGTCTATTCTGTGCTCCG
ACAAGACCGGCACCTTGACCCTTAACAAGATGGCAATTCAAGAGGAGACC
CCTATTTACATGGAGGGCGAGACCCAGTACTCCCTCCTTCGCTACGCGGC
CATGGCCTCCAAGTGGACCGAGCCCCCCCGTGACGCCCTTGACACGCTTG
TGCACGGATCTGCGGACTTGAAGAGCCTGGATAGCATCAAACAGACTGAC
TACATGCCTTTTGACCCGACGGTCAAGCGCACGGAGGGAACGGTGCAGCT
TCCTACTGGCGAGACGTTCAAGGTTTCCAAGGGCGCGCCGCACATCATCA
TGCACCTCGTGGACCAGGAGGCCAACGCCGCCATCATTGCGCAATGCGAC
AAGGACGTGGAGGCCCTCGGGGAGCGTGGCATCCGCTCTCTGGCTGTGGC
GAAGACCAAGGGCTCTGCTGACGGACCTTGGGAGATGGTGGGTCTGCTCA
CTTTCCTTGACCCCCCCCGCCCCGACACCAAGGACACAATCGAGCGCGCC
AACAAGTTCGGTGTGGAGGTGAAGATGATCACGGGTGACCATTTACTGAT
TGCTAAGGAGACGGCCCGCCAGCTCGGCATGGCTACCAACATCGAGAACG
CTGCATTATTGCCTAAGCTTGAGGAGGATGGCAAGCCACCTAAGAATCTG
ATGGACTTTTTCAAGTATATTGAGGCTACCGCCGGTTTCGCCCAGGTCTT
CCCGGAGCACAAGTTTTTGATCGTCGAGGCTCTCCGTCGTGGTGGCTACA
AGGTATGATGTGTGTCCTTCCCTCTTGTCCGTAAGCACACTTTGCTTGCT
CTTGTGTTGCGTTCTTGACACACTGCATTTCACACGCAAACCACTCACCC
TTGATTTCCCTCTCTCTCCGTCCTCCCTCCCTTAGACGGGCATGACTGGT
GATGGTGTTAATGATGCCCCTGCCCTCAAGCGTGCGGATGTGGGTGTTGC
CGTGCAGGGCTCCACCGACGCTGCCCGTGCCGCTGCTGATATTGTGTTGA
CCAAGCCCGGCCTCTCCACCATCGTCACGGCCATCGTCGTGGCTCGTACC
GTGTTCGGGCGGATGACATCTTTCATCACCTACCGTATCGCCGCCACGCT
TCAGCTGCTGGTATTCTTCTTCATCGCCGTGCTCACGATGCAGCCTGCCA
AGTTCCAGCCCGCGGGCGCCGTCGACGAGTGGCCTGCATTCTTCCACATG
CCCGTGATGATGCTCATGCTTATCACCCTCCTCAACGACGGCACGCTCAT
CTCCATTGGCTACGACAACGTGGTGCCCAACACCACTCCCGACAAGTGGA
ACCTCAAGGTGCTCTTCACCGTATCTGGTGTGCTCGGCGGCGTGGCCTGC
CTCTCCTCCCTGGCCATGCTCTGGGTCGCCCTCAACTGTCACGAGCCCAA
CGGCGTGTGGGCTGGTCTCGGTCTGGCCCCCTTGACCTACGGACAGATCA
CCTCCATGGTGTACCTCAAGGTCTCCATCTCCGATTTCTTGACTCTCTTC
TCCTCCCGCTCAGGCGCCGGCTTTTTCTGGACCAATAAGCCCTCCAAGAT
CCTCTTGATCGCTGCTGGTGTTGCCTGCTCCCTGTCCACCATCATGGCGA
ATGCCTGGCCTGAGTCCATGCCTGACGGCGTGCCCACAGTGGGCATGGCC
CGTGCCGAGCCTCGCGAGCTGTCTGCGATCGTGTGGGTCTACTGCTTGAT
CTGCTGGTTCATCCAGGACGCCGCCAAGGTGGGGACCTACGCTTTGCTGA
AGAAGAACAACACCTTCGGCATCAACGACATCGTGAAGATGCACAAGGAA
GATCCCTTGGAAAACGCTTAAGCTGAAACTGACCTTACCCACTTTCCTGT
GCAAAAAAGTGTAGCAGCAGGAGTTAGATGTGATATGTGTCTTATATATA
CAAACGTGAGGCGGAACGCGACGCTGACCCCGCACGTGTGCCTGTGCGTG
CATGTGTGTTCGTTTCCTCTCGAATCTCTGTGTATGCGCGATGGATGTGT
CGCGTGTGATGGACATGTAGTCTAAGTGGTAGATAACTGTTCAATTTAAT
TTAATTAACTTTTCGCAGCGACTTAAGTATTCAGAAAGATTTAATGGCCC
ATCGGACTCGCCTCAATCCCTATGCGAATGTCCTGCGTTAGCCAACATAT
TGGCCTGTGGAGAGAAGATGTGAGAATGGAGGTGAGAGGAAAGACGGAGA
GACGAGAAGCCATTCCGATGACATTTATTTGGGAAAGAAGTGACAGATTT
CGAATTGACAAGAGCAACTACTTGTGAGTCGTTATCCTGTTAAAACCCTC
TACAGCATGCATTAGAAAGAGTTTGTGTTAGGATGCATATGGGGAACACG
CGTAGATGCATTCAGGGCGATCAAAAAGTTAAAAGTGACGGAGCACTCCC
GATAAGAGAATCAGAGCAGGGCAGTTAGAGAGTGAGGACGCGACAAAAGA
AATACCACTTGCAGTGAT

Coding sequence (CDS) from alignment at chr12:136564..140731+

>NO12G00380.1 ID=NO12G00380.1|Name=NO12G00380.1|organism=Nannochloropsis oceanica|type=CDS|length=2901bp|location=Sequence derived from alignment at chr12:136564..140731+ (Nannochloropsis oceanica)
ATGTCCAAGACCCCCGCGGTGAGCAACAAGTCCATCGGCAAGAGCATCCA
TGCTCCGGGCGACCACACCCATGTCTCCGACACCTTTTACGACCACGAAG
GCCGTCTGGCCAAGAAGTCCAACCGTATGGGTAACCTGGAGAACGAGGAC
CACGACCGCGCCCTGGAGCGCACCATGCGGGAGGTGAACAAGGCCTCCAT
TGCTTTGACACTTCGCTCCCAAGGCTCCTTGGGACGTGGAGAGGGGGCCG
CCCCCGGCTTGGACGGCGTCTTCTCCAAGCCCGAAGCTGCTCCCATCCAC
ATCGACACGGACGAGAATGACCCCGAGATCCACCACTTGCACTCCGACGG
TCTCTCTTCCGCCCTGGCTGCCGAGCTGCTTAAGAAGTTTGGCCGCAACG
AGCTCCCCGAGAAGAAGAAGCCCAAGTGGAAGATTTTCGCCGAGCAGTTG
TACCAGCCCATGCCTCTCATGATCTGGATGGCCATCATCATCGAGGCCGC
CATCGAGTCCTGGCCTGACATGGGCATCCTTCTGGCCATCCAGTTCCTGA
ACGCCTCCCTGTCCTACTACGAGACCACCAAGGCCGGCGACGCCGTCGCT
GCGCTCAAGGCCTCCCTGAAGCCCGTGGCATATGTGAAGCGTGACGGAAA
GTTCGCTTCCATGGACGCCGCCCTCCTCGTGCCCGGTGACTTGGTGCTGC
TCGGCTCGGGTGGTGCCGTCCCGGCTGACTGTGTGGTCATGGACTCCCAG
ATCGATGTGGACCAGGCTGCCCTGACTGGGGAGTCGCTTCCCGTGACCAT
GTACAAGGGCGACTCTTGCAAGATGGGCTCTACCGTCGTGCGTGGTGAGG
TCGAGGCTACCGTGGAGGCCACGGGCGCCAACACCTTCTTCGGCCGCACT
GCTGCTTTGCTTGTGGGTGGTGACGAGGTGTCCAACCTTCAGAAGCTGCT
GATTCGCATCATGATTATTCTCGTCGTGCTGTCCATGACTCTGTGCCTGA
TTGCTTTCGGCTACCTGCTCGGCCGCGGAGAGACCCTGCGTGAGGCTCTG
TCGTTCACCGTCGTGCTGCTGGTCGCCTCAATCCCCATCGCCATCGAGAT
TGTCTGCACCACCACTCTGGCCCTGGGCTCCCACGAGCTCTCGAAGGACG
GCGCCATCGTCTCTCGTCTGGCCGCCATCGAGGACATGGCTGGCATGTCT
ATTCTGTGCTCCGACAAGACCGGCACCTTGACCCTTAACAAGATGGCAAT
TCAAGAGGAGACCCCTATTTACATGGAGGGCGAGACCCAGTACTCCCTCC
TTCGCTACGCGGCCATGGCCTCCAAGTGGACCGAGCCCCCCCGTGACGCC
CTTGACACGCTTGTGCACGGATCTGCGGACTTGAAGAGCCTGGATAGCAT
CAAACAGACTGACTACATGCCTTTTGACCCGACGGTCAAGCGCACGGAGG
GAACGGTGCAGCTTCCTACTGGCGAGACGTTCAAGGTTTCCAAGGGCGCG
CCGCACATCATCATGCACCTCGTGGACCAGGAGGCCAACGCCGCCATCAT
TGCGCAATGCGACAAGGACGTGGAGGCCCTCGGGGAGCGTGGCATCCGCT
CTCTGGCTGTGGCGAAGACCAAGGGCTCTGCTGACGGACCTTGGGAGATG
GTGGGTCTGCTCACTTTCCTTGACCCCCCCCGCCCCGACACCAAGGACAC
AATCGAGCGCGCCAACAAGTTCGGTGTGGAGGTGAAGATGATCACGGGTG
ACCATTTACTGATTGCTAAGGAGACGGCCCGCCAGCTCGGCATGGCTACC
AACATCGAGAACGCTGCATTATTGCCTAAGCTTGAGGAGGATGGCAAGCC
ACCTAAGAATCTGATGGACTTTTTCAAGTATATTGAGGCTACCGCCGGTT
TCGCCCAGGTCTTCCCGGAGCACAAGTTTTTGATCGTCGAGGCTCTCCGT
CGTGGTGGCTACAAGACGGGCATGACTGGTGATGGTGTTAATGATGCCCC
TGCCCTCAAGCGTGCGGATGTGGGTGTTGCCGTGCAGGGCTCCACCGACG
CTGCCCGTGCCGCTGCTGATATTGTGTTGACCAAGCCCGGCCTCTCCACC
ATCGTCACGGCCATCGTCGTGGCTCGTACCGTGTTCGGGCGGATGACATC
TTTCATCACCTACCGTATCGCCGCCACGCTTCAGCTGCTGGTATTCTTCT
TCATCGCCGTGCTCACGATGCAGCCTGCCAAGTTCCAGCCCGCGGGCGCC
GTCGACGAGTGGCCTGCATTCTTCCACATGCCCGTGATGATGCTCATGCT
TATCACCCTCCTCAACGACGGCACGCTCATCTCCATTGGCTACGACAACG
TGGTGCCCAACACCACTCCCGACAAGTGGAACCTCAAGGTGCTCTTCACC
GTATCTGGTGTGCTCGGCGGCGTGGCCTGCCTCTCCTCCCTGGCCATGCT
CTGGGTCGCCCTCAACTGTCACGAGCCCAACGGCGTGTGGGCTGGTCTCG
GTCTGGCCCCCTTGACCTACGGACAGATCACCTCCATGGTGTACCTCAAG
GTCTCCATCTCCGATTTCTTGACTCTCTTCTCCTCCCGCTCAGGCGCCGG
CTTTTTCTGGACCAATAAGCCCTCCAAGATCCTCTTGATCGCTGCTGGTG
TTGCCTGCTCCCTGTCCACCATCATGGCGAATGCCTGGCCTGAGTCCATG
CCTGACGGCGTGCCCACAGTGGGCATGGCCCGTGCCGAGCCTCGCGAGCT
GTCTGCGATCGTGTGGGTCTACTGCTTGATCTGCTGGTTCATCCAGGACG
CCGCCAAGGTGGGGACCTACGCTTTGCTGAAGAAGAACAACACCTTCGGC
ATCAACGACATCGTGAAGATGCACAAGGAAGATCCCTTGGAAAACGCTTA
A

Synonyms

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