NO11G03530.1, NO11G03530.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO11G03530.1
Unique NameNO11G03530.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length944
Alignment locationchr11:1137434..1138377 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:1137434..1138377 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G03530.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G03530NO11G03530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO11G03530.1NO11G03530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO11G03530.1.cds1NO11G03530.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO11G03530.1 ID=NO11G03530.1|Name=NO11G03530.1|organism=Nannochloropsis oceanica|type=mRNA|length=944bp
TTCAACGGCATTCGCCACCATACACCCCTTGGTCCCTTTAATTGTCGTCC
AAACCACATCCAGGATGTTATGACACAAAAGATGCTGCTGCTGCTCCTTC
AAAGTAACTTCTTCTTACATCTCTTTCTCTCTCCGTGAAATCGGACTTCT
CTTTCCATTTGCCTCCGGGCCGTGGCCGCCTCGCACGCGCACATATTTGT
TGTCCTTTTTACCCTCGATGACGACCCTCGTGTCCTCTTTCTGTACCTGT
ACCAACACTCGTGCTCGCATCATATATTGAATCAAATCATTCGACTTGCA
CTATTTCATAGACAGAGAAGGGACGCAAACGCTTTCCGCAAGATCTCCCG
TCGTAATAGTAGTATGACAGTGCATATCCTCTTTTGAAACTTGGCACTCT
TGGATGCACTGGCGCACACGGGGCCTGTATTTAGATAGACACTCACCTAG
AAAGATGTAGAGCATTTTGAAGGAAAAGGAAGGAATGAAATGTGTGGACC
AGACATCAGCATTGGGCGCAGCAGAAGGGTTCAAGAGGCAGAAAAAGGAG
CTGGGACATCCGTGCATAGTCCCCCTTTCGTTTTTCCAGAGAAGATGCTT
TCATTAGTAACTTCTACCGTGAGATACTAATCTGAAGCACGAATATGGTT
GTGAATCCATAATCATTCATTTCGTGGGACTGTATGAAACAATTCACACC
GAGCACTTGTCCCTCATTCGAGGAAGAGGAGAAGAGCAGGAGCAGGAGGT
ACAAGGCAGGACACCGGCGTTTCATTGGGTACAAGGGCGAGGGCCGGGAC
GAAGATGAGGATGAGAGCTCTGACGATGATGACAATGAGAGCTCTGACGA
TGATGACAATGAGAAGCAACAGGAGGAGGAGCCCGAGCTGGTGAATTTGC
CTGTACTCCTACGAGGGGCAAGCCAGAATTTTTACGACGGCTAA
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protein sequence of NO11G03530.1

>NO11G03530.1-protein ID=NO11G03530.1-protein|Name=NO11G03530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=87bp
MKQFTPSTCPSFEEEEKSRSRRYKAGHRRFIGYKGEGRDEDEDESSDDDD
NESSDDDDNEKQQEEEPELVNLPVLLRGASQNFYDG*
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mRNA from alignment at chr11:1137434..1138377-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO11G03530.1 ID=NO11G03530.1|Name=NO11G03530.1|organism=Nannochloropsis oceanica|type=mRNA|length=944bp|location=Sequence derived from alignment at chr11:1137434..1138377- (Nannochloropsis oceanica)
TTCAACGGCATTCGCCACCATACACCCCTTGGTCCCTTTAATTGTCGTCC
AAACCACATCCAGGATGTTATGACACAAAAGATGCTGCTGCTGCTCCTTC
AAAGTAACTTCTTCTTACATCTCTTTCTCTCTCCGTGAAATCGGACTTCT
CTTTCCATTTGCCTCCGGGCCGTGGCCGCCTCGCACGCGCACATATTTGT
TGTCCTTTTTACCCTCGATGACGACCCTCGTGTCCTCTTTCTGTACCTGT
ACCAACACTCGTGCTCGCATCATATATTGAATCAAATCATTCGACTTGCA
CTATTTCATAGACAGAGAAGGGACGCAAACGCTTTCCGCAAGATCTCCCG
TCGTAATAGTAGTATGACAGTGCATATCCTCTTTTGAAACTTGGCACTCT
TGGATGCACTGGCGCACACGGGGCCTGTATTTAGATAGACACTCACCTAG
AAAGATGTAGAGCATTTTGAAGGAAAAGGAAGGAATGAAATGTGTGGACC
AGACATCAGCATTGGGCGCAGCAGAAGGGTTCAAGAGGCAGAAAAAGGAG
CTGGGACATCCGTGCATAGTCCCCCTTTCGTTTTTCCAGAGAAGATGCTT
TCATTAGTAACTTCTACCGTGAGATACTAATCTGAAGCACGAATATGGTT
GTGAATCCATAATCATTCATTTCGTGGGACTGTATGAAACAATTCACACC
GAGCACTTGTCCCTCATTCGAGGAAGAGGAGAAGAGCAGGAGCAGGAGGT
ACAAGGCAGGACACCGGCGTTTCATTGGGTACAAGGGCGAGGGCCGGGAC
GAAGATGAGGATGAGAGCTCTGACGATGATGACAATGAGAGCTCTGACGA
TGATGACAATGAGAAGCAACAGGAGGAGGAGCCCGAGCTGGTGAATTTGC
CTGTACTCCTACGAGGGGCAAGCCAGAATTTTTACGACGGCTAA
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Coding sequence (CDS) from alignment at chr11:1137434..1138377-

>NO11G03530.1 ID=NO11G03530.1|Name=NO11G03530.1|organism=Nannochloropsis oceanica|type=CDS|length=261bp|location=Sequence derived from alignment at chr11:1137434..1138377- (Nannochloropsis oceanica)
ATGAAACAATTCACACCGAGCACTTGTCCCTCATTCGAGGAAGAGGAGAA
GAGCAGGAGCAGGAGGTACAAGGCAGGACACCGGCGTTTCATTGGGTACA
AGGGCGAGGGCCGGGACGAAGATGAGGATGAGAGCTCTGACGATGATGAC
AATGAGAGCTCTGACGATGATGACAATGAGAAGCAACAGGAGGAGGAGCC
CGAGCTGGTGAATTTGCCTGTACTCCTACGAGGGGCAAGCCAGAATTTTT
ACGACGGCTAA
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Synonyms
Publications