NO11G03000.1, NO11G03000.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G03000.1
Unique Name	NO11G03000.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3327
Alignment location	chr11:940490..945409 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:940490..945409 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO11G03000.1 vs.
Match: GAQ90890.1 (putative DNA ligase 1 [Klebsormidium nitens])

HSP 1 Score: 619.0 bits (1595), Expect = 2.300e-173
Identity = 370/880 (42.05%), Postives = 508/880 (57.73%), Query Frame = 0

Query:   46 GGGDG-----GGGGSAAASPSAAAAMAAASSAGTKKQKNSAEMVDLLTSEEDGVHDDEVEEEQQEVLPQIDLTATETKERHETQALTEAMEKLPEREAKDFVDEMGAGKQHKPERDGKNKSATIPLPTPPTSPSAFFSAAGAASSKATASMTGSPVDLPCARYQPSSDGCWSRGQLAPYLHLAWAFELLCSTTRRLTKADVLVNMFRSLMALAPDDVLPAVYLSSNKLASSFEGIDINVGGSTVSAAVIHATGTSSDKMKQLYTELGDLGDVAQALRVKQRLLVVPEPLTVRGVYQTIIDMASMKGQGCEGRKRMMMVRLIRSCRGPEAKFLVRTLVQNLRTGATLTSVLAALAMAAVMHHAEREKEGGTEGGTEGGTGRGRGKAVMEARLKAAQVAVKECYNCCPDIPRIVKALVEGGLEAMQTACEVAVGTPVKPMLAKICSGIPELMEKYGSEPFTCEFKYDGQRAQVHLLSDGSVKIFNRHIEDMTDKYPDVVQLMHDLQRALRSSPPSSLPPSPSEQPLVDVILDTELVAVDRAQGNKLLAFQTLSTRGR----KDVTAEGVTVQICVFAFDLLFLNGQSHLKEHLESRRTLLYSLFAPVVEGGKERGKEGGKEGGFEGRFDFATHRETKDPEK----------VQEFFTEALEAGCEGIMCKSLSHE--YEPSKRTESWLKVKKDYIEGLHDTLDLVPIGAWYGNGRKAGWFSPILLACYNPETEELQSLCRCMSGLTDAMYADTTKFYQSEGRIIDAPKSYVRTGETCPIWFDPCQVWEIRGAELTISPVHKAGVGLVDKQKGMSLRFPRFLKVREDKGVEDATTAAQIAELFRMQIRRVEVEGDGEGK-------GGGGGKQKVAAEEEEGG 898
            GGGD      G     A  P  A   A ++  G   +K+  E+      EEDGV       E     P+     ++   + ++Q + ++ E   + +  +   E G  ++   E+ G N +  +                 A      +    + V L  A+Y P    CW+RG+ APYLHLA  FE+L     RL  AD+L NMFRSL+AL+PDD+LPAVYLS+N++A  FE +D+++GGSTV AA+  ATGTS  +M++LY  LGDLGDVA A + +Q  L+ P PL V  VY+ +  ++   G GC  RK+ +++ L+R+CR  E +F+VRTL+ N+R GA + +VL ALA A V+H +                  G     ++++L+ A  AV E YN CP++  +V  LVEGG+EA+     VA+GTP+KPMLAKI +GIPE+++++ S+ FT EFKYDGQRAQ+HLL DG+V+IF+R+ +D T K+PDV+  +    R   SS                 I+D ELVAVDR+ GNKL+AFQTLSTR R      +    V + +CVFAFDL+F++GQ+ +KE    RR  +++ F                     G F+FA     ++PE           +Q F  +A  A CEGIM K+L  +  Y  SKR++SWLKVKKDYIEGL+D+LDLVPIGAWYG GRK GWFSP LL CY+P+ EE QS+CRCMSG TD  Y +TT+ Y+ E R +D    Y RT E   +WF P  VWEIRGA+LT+SPVH A  GLV   +G+S+RFPR +K R DK  ED+T  + IAELF  Q R+++V G   GK       GG G   +V  E+EE G
Sbjct: 1055 GGGDSKAHASGERDGVATGPQEAKGGACSTEEGALAEKSPEEVDPPKEKEEDGVSKHVARAET----PRDGDLGSQLNGKQQSQEVRQSQEAR-QTQNSEHSKEGGEKEEVAEEKGGANGAKEVEKGNKVLPSERQLGGVVATGKLGASESERTAVTLSLAKYDPIGHACWTRGEAAPYLHLARTFEILERERGRLKMADILCNMFRSLLALSPDDILPAVYLSTNRVAPDFENVDMSIGGSTVGAAIAEATGTSKAQMRELYNSLGDLGDVALACKQRQATLMAPPPLRVAQVYRALRKISKETGPGCNNRKKNIVLGLLRACREKETQFVVRTLILNMRIGAMMKTVLPALAQAVVIHKS-----------LPSDAPAGPAINGLKSKLQEASAAVVEAYNFCPNLDVLVPTLVEGGIEAVIAQGAVALGTPIKPMLAKITNGIPEVLKRFQSQAFTAEFKYDGQRAQIHLLPDGTVRIFSRNCDDNTAKFPDVIATVKQAARGGCSS----------------FIIDAELVAVDRSAGNKLMAFQTLSTRARGGEKTKIELADVKIAVCVFAFDLMFVDGQALVKESFRERRRRMHAAFPK----------------HSAGHFEFAREATVEEPESDPELEATSSLLQTFLQDAFAASCEGIMVKALDKDAGYAASKRSDSWLKVKKDYIEGLNDSLDLVPIGAWYGQGRKVGWFSPFLLGCYDPDREEYQSVCRCMSGFTDVFYKETTQLYR-EQRQLDQKPPYYRTLEQPDVWFRPHDVWEIRGADLTVSPVHAAAAGLVHPTRGISMRFPRMIKTRPDKKPEDSTPPSYIAELFHRQTRKLDV-GLANGKDQKVSVQGGAGPAAEVGGEKEESG 1884

The following BLAST results are available for this feature:

BLAST of NO11G03000.1 vs.

BLAST of NO11G03000.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
GAQ90890.1	2.300e-173	42.05	putative DNA ligase 1 [Klebsormidium nitens]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO11G03000	NO11G03000	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO11G03000.1	NO11G03000.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO11G03000.1.cds1	NO11G03000.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03000.1.cds2	NO11G03000.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03000.1.cds3	NO11G03000.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03000.1.cds4	NO11G03000.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03000.1.cds5	NO11G03000.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03000.1.cds6	NO11G03000.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03000.1.cds7	NO11G03000.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03000.1.cds8	NO11G03000.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03000.1.cds9	NO11G03000.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03000.1.cds10	NO11G03000.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr11:940490..945409-
coding sequence from alignment at chr11:940490..945409-

mRNA sequence

>NO11G03000.1 ID=NO11G03000.1|Name=NO11G03000.1|organism=Nannochloropsis oceanica|type=mRNA|length=3327bp
CTGTTGTAAGAAGCGCAGGGCTGTGGCTTGGCCCAGGCCCGAAGCCGCGC
CGGTGACGAGGGCCGTGACGTGACTGAGCACCATGCGTTGCGTAGGTGTG
TAGTCTGTTCTTTTTGTTTTGTTTTGTTTTGTTTTGTTGTTTTGTTTTGT
TTTTGTTTTTTTTGAAAGCTGGTCTTTTAGTTCTTTTTGAGCTACATCTC
TCTAGAACTATCGCATGCAACCTGGTCTTAGGCGATAGCAGCGATCTCAG
ACCGAGCAACGGGGCGTTATTGAGACAGAACCCCATGACATGCACACGTA
GGTATACAACGAAACCACGAAGATTATGATGCATACGTATCATGCCCAGC
TCCGTTTGGTAGTCATGTTGTGGCCTTGGCACATTTTGTTTGCTTGACTC
CACATTCTAATCTTGAAGTTCTTCCATACGCCCCCACCAAGTCGTATGCC
TCCCAAGAAGCGCAAGGCCGCCATGACCAGTGGTGCCAGCCCCGCGACAA
CAAAGGCTAAGGGCACGAACGGATTAGCTGGCAAAGTCCCCTCGACACCT
GGCCAGACGAATATCACTGCCTTTTTCGGTGGGGGCGGCGACGGCGGCGG
CGGCGGGTCGGCTGCTGCTTCTCCTAGCGCTGCTGCTGCCATGGCTGCTG
CCTCTTCTGCAGGCACAAAGAAGCAAAAGAATTCGGCAGAGATGGTGGAT
CTTCTTACCTCGGAAGAAGACGGTGTTCATGACGACGAAGTGGAGGAGGA
GCAACAGGAAGTGCTCCCGCAGATTGACCTGACAGCCACCGAAACAAAAG
AGCGACATGAGACCCAAGCCTTGACCGAGGCCATGGAGAAGCTGCCGGAA
CGCGAAGCCAAGGATTTTGTCGACGAGATGGGCGCTGGCAAACAGCATAA
ACCAGAAAGAGACGGGAAGAATAAATCGGCCACGATACCTTTGCCCACTC
CTCCTACATCTCCCTCAGCCTTCTTCAGTGCCGCCGGTGCCGCTAGCAGC
AAAGCCACCGCCTCCATGACTGGCAGCCCCGTCGACCTTCCGTGTGCACG
TTATCAGCCCTCCTCTGACGGTTGTTGGTCTCGGGGGCAGCTGGCGCCTT
ACTTGCACCTTGCTTGGGCGTTCGAGCTGCTTTGTTCCACCACCCGCCGC
CTGACAAAAGCCGATGTCCTCGTCAACATGTTTCGGTCGCTTATGGCCCT
GGCCCCGGACGACGTCCTCCCTGCTGTGTATTTGTCAAGCAACAAGCTGG
CCTCGTCGTTTGAGGGCATCGATATCAATGTGGGCGGCTCGACGGTGTCT
GCGGCGGTGATTCACGCCACTGGGACGTCGTCAGACAAGATGAAGCAGTT
GTATACGGAGTTGGGGGATCTCGGGGATGTGGCGCAAGCCCTGCGAGTGA
AGCAGCGCCTCCTCGTGGTCCCTGAGCCCCTGACGGTGCGAGGCGTCTAT
CAGACTATAATCGATATGGCCAGCATGAAAGGGCAAGGATGCGAGGGTCG
GAAACGCATGATGATGGTGCGTCTCATTCGCTCGTGTCGAGGCCCCGAAG
CCAAGTTCCTAGTCCGCACCCTCGTCCAGAATCTCCGCACGGGCGCAACA
CTCACCAGTGTACTGGCAGCTCTTGCCATGGCCGCCGTCATGCACCACGC
CGAGCGGGAGAAGGAGGGAGGGACCGAGGGAGGGACCGAGGGAGGGACGG
GGAGGGGGAGGGGGAAGGCAGTGATGGAGGCACGGTTGAAGGCGGCGCAG
GTGGCAGTTAAGGAATGCTACAACTGCTGTCCCGACATTCCCCGCATCGT
CAAGGCCCTGGTAGAGGGCGGTTTGGAAGCCATGCAGACGGCCTGTGAGG
TAGCTGTAGGCACGCCGGTCAAACCTATGCTTGCCAAGATCTGCAGCGGT
ATTCCTGAGCTCATGGAGAAATACGGTTCCGAGCCGTTTACTTGTGAATT
CAAATACGACGGCCAACGGGCCCAAGTACACCTCCTCAGCGACGGGAGCG
TCAAGATTTTCAATCGCCATATCGAGGACATGACTGACAAATACCCTGAC
GTCGTCCAGCTGATGCACGACCTGCAACGAGCCCTCCGTTCCTCCCCCCC
TTCCTCTCTCCCTCCCTCCCCCTCCGAGCAACCGTTGGTAGACGTCATCC
TGGACACAGAACTCGTGGCTGTGGACCGAGCGCAGGGCAACAAGCTCCTG
GCCTTTCAGACGTTGTCAACCCGAGGACGCAAGGACGTGACCGCCGAGGG
GGTCACGGTGCAAATCTGCGTGTTTGCCTTTGATCTCCTCTTCCTCAATG
GGCAGTCGCATCTCAAGGAGCATCTTGAATCCCGGCGAACCCTCCTGTAC
TCCCTCTTTGCACCTGTGGTGGAGGGAGGGAAGGAGAGAGGGAAGGAGGG
AGGGAAGGAGGGGGGGTTTGAAGGTCGTTTTGACTTTGCGACCCATAGAG
AGACGAAGGACCCGGAAAAGGTGCAGGAATTTTTCACAGAAGCTTTGGAG
GCAGGATGCGAAGGGATCATGTGCAAGTCCCTCTCCCACGAGTATGAGCC
GTCCAAGCGGACTGAATCCTGGCTGAAGGTGAAGAAAGATTACATCGAGG
GTTTGCATGACACTCTCGACCTGGTCCCTATCGGCGCCTGGTACGGCAAC
GGCCGCAAGGCCGGTTGGTTCTCTCCCATCCTCCTCGCCTGCTACAACCC
CGAGACCGAAGAGCTCCAGTCCCTCTGTCGGTGCATGTCGGGATTAACCG
ATGCCATGTACGCCGACACCACCAAATTTTATCAGAGTGAGGGGAGGATC
ATTGACGCGCCTAAGAGTTACGTCAGGACAGGGGAGACGTGCCCGATATG
GTTCGACCCCTGTCAGGTTTGGGAGATACGGGGGGCGGAACTGACCATAA
GCCCGGTGCATAAGGCAGGGGTGGGGTTGGTAGACAAGCAGAAGGGGATG
AGTTTGAGGTTTCCGCGCTTTTTGAAGGTGAGGGAGGATAAGGGGGTGGA
GGACGCAACGACTGCGGCGCAGATAGCAGAGTTGTTCAGGATGCAGATTA
GGAGGGTAGAGGTGGAGGGGGATGGGGAGGGTAAAGGAGGGGGCGGAGGG
AAGCAGAAGGTGGCAGCGGAGGAAGAGGAAGGAGGAGGGGTCGAGGAAGC
GGAAGATTACTGGGAAGATATTTTGTAAGTGGAGGGTGTAAGAGGGGAGG
TAGAGTTTAATGATTCAAAGAGAAGGACGAGGACATAGCTAGTGTACAGC
AAGCCCTGGACCGACAAGCAGCCCGTGGCATATGCCAATGGGACGCAAAG
AAGAAGAAAACTGAAGATAGTCCCGTG

protein sequence of NO11G03000.1

>NO11G03000.1-protein ID=NO11G03000.1-protein|Name=NO11G03000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=911bp
MPPKKRKAAMTSGASPATTKAKGTNGLAGKVPSTPGQTNITAFFGGGGDG
GGGGSAAASPSAAAAMAAASSAGTKKQKNSAEMVDLLTSEEDGVHDDEVE
EEQQEVLPQIDLTATETKERHETQALTEAMEKLPEREAKDFVDEMGAGKQ
HKPERDGKNKSATIPLPTPPTSPSAFFSAAGAASSKATASMTGSPVDLPC
ARYQPSSDGCWSRGQLAPYLHLAWAFELLCSTTRRLTKADVLVNMFRSLM
ALAPDDVLPAVYLSSNKLASSFEGIDINVGGSTVSAAVIHATGTSSDKMK
QLYTELGDLGDVAQALRVKQRLLVVPEPLTVRGVYQTIIDMASMKGQGCE
GRKRMMMVRLIRSCRGPEAKFLVRTLVQNLRTGATLTSVLAALAMAAVMH
HAEREKEGGTEGGTEGGTGRGRGKAVMEARLKAAQVAVKECYNCCPDIPR
IVKALVEGGLEAMQTACEVAVGTPVKPMLAKICSGIPELMEKYGSEPFTC
EFKYDGQRAQVHLLSDGSVKIFNRHIEDMTDKYPDVVQLMHDLQRALRSS
PPSSLPPSPSEQPLVDVILDTELVAVDRAQGNKLLAFQTLSTRGRKDVTA
EGVTVQICVFAFDLLFLNGQSHLKEHLESRRTLLYSLFAPVVEGGKERGK
EGGKEGGFEGRFDFATHRETKDPEKVQEFFTEALEAGCEGIMCKSLSHEY
EPSKRTESWLKVKKDYIEGLHDTLDLVPIGAWYGNGRKAGWFSPILLACY
NPETEELQSLCRCMSGLTDAMYADTTKFYQSEGRIIDAPKSYVRTGETCP
IWFDPCQVWEIRGAELTISPVHKAGVGLVDKQKGMSLRFPRFLKVREDKG
VEDATTAAQIAELFRMQIRRVEVEGDGEGKGGGGGKQKVAAEEEEGGGVE
EAEDYWEDIL*

mRNA from alignment at chr11:940490..945409-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO11G03000.1 ID=NO11G03000.1|Name=NO11G03000.1|organism=Nannochloropsis oceanica|type=mRNA|length=4920bp|location=Sequence derived from alignment at chr11:940490..945409- (Nannochloropsis oceanica)
CTGTTGTAAGAAGCGCAGGGCTGTGGCTTGGCCCAGGCCCGAAGCCGCGC
CGGTGACGAGGGCCGTGACGTGACTGAGCACCATGCGTTGCGTAGGTGTG
TAGTCTGTTCTTTTTGTTTTGTTTTGTTTTGTTTTGTTGTTTTGTTTTGT
TTTTGTTTTTTTTGAAAGCTGGTCTTTTAGTTCTTTTTGAGCTACATCTC
TCTAGAACTATCGCATGCAACCTGGTCTTAGGCGATAGCAGCGATCTCAG
ACCGAGCAACGGGGCGTTATTGAGACAGAACCCCATGACATGCACACGTA
GGTATACAACGAAACCACGAAGATTATGATGCATACGTATCATGCCCAGC
TCCGTTTGGTAGTCATGTTGTGGCCTTGGCACATTTTGTTTGCTTGACTC
CACATTCTAATCTTGAAGTTCTTCCATACGCCCCCACCAAGTCGTATGCC
TCCCAAGAAGCGCAAGGCCGCCATGACCAGTGGTGCCAGCCCCGCGACAA
CAAAGGCTAAGGGCACGAACGGATTAGCTGGCAAAGTCCCCTCGACACCT
GGCCAGACGAATATCACTGCCTTTTTCGGTGGGGGCGGCGACGGCGGCGG
CGGCGGGTCGGCTGCTGCTTCTCCTAGCGCTGCTGCTGCCATGGCTGCTG
CCTCTTCTGCAGGCACAAAGAAGCAAAAGAATTCGGCAGAGATGGTGGAT
CTTCTTACCTCGGAAGAAGACGGTGTTCATGACGACGAAGTGGAGGAGGA
GCAACAGGAAGTGCTCCCGCAGATTGACCTGACAGCCACCGAAACAAAAG
AGCGACATGAGACCCAAGCCTTGACCGAGGCCATGGAGAAGCTGCCGGAA
CGCGAAGCCAAGGATTTTGTCGACGAGATGGGCGCTGGCAAACAGCATAA
ACCAGAAAGAGACGGGAAGAATAAATCGGCCACGATACCTTTGCCCACTC
CTCCTACATCTCCCTCAGCCTTCTTCAGTGCCGCCGGTGCCGCTAGCAGC
AAAGCCACCGCCTCCATGACTGGCAGCCCCGTCGACCTTCCGTGTGCACG
TTATCAGCCCTCCTCTGACGGTTGTTGGTCTCGGGGGCAGCTGGCGCCTT
ACTTGCACCTTGCTTGGGCGTTCGAGCTGCTTTGTTCCACCACCCGCCGC
CTGACAAAAGCCGATGTCCTCGTCAACATGTTTCGGTCGCTTATGGCCCT
GGCCCCGGACGACGTCCTCCCTGCTGTGTATTTGTCAAGCAACAAGCTGG
CCTCGTCGTTTGAGGGCATCGATATCAATGTGGGCGGCTCGACGGTGTCT
GCGGCGGTGATTCACGCCACTGGGACGTCGTCAGACAAGATGAAGCAGTT
GTATACGGAGTTGGGGTGAGTAGGGGGAGAAAGGAGGGAAAGGGCTGATC
AAACGCTTGCCATCAAATAATAAATTGTATTATTTATTTGCCCAATCATA
TCGGAATCAACCTCCTGAAATACTTTCCTCCCTCTCCTCTCTTCCTCCCT
TCCTAACATAGGGATCTCGGGGATGTGGCGCAAGCCCTGCGAGTGAAGCA
GCGCCTCCTCGTGGTCCCTGAGCCCCTGACGGTGCGAGGCGTCTATCAGA
CTATAATCGATATGGCCAGCATGAAAGGTACCTCTTTTTTCCTTCCTCCC
ACCCTTTATAGCCACGGAACTAGCGTTCCTCCTTTCCTTCCTCCGTCTTT
CCCTCCCGCGCGTCTTCGCTCCCGCTTCCCTTAATTTGACTCGCGGCATG
TCTTCCAACAAACGACACCTACAATCATACGTACGCAATAATAAGGGCAA
GGATGCGAGGGTCGGAAACGCATGATGATGGTGCGTCTCATTCGCTCGTG
TCGAGGCCCCGAAGCCAAGTTCCTAGGTGAGTCTTGCCCTACGTTCCCTC
CTTCCCCCCCCCCCCTCCCTCTATCCTATTTTTTCCTTCCTTCCTTCCTT
CTTTCCTTACATTCTTAATCTAAGGCTAGGCGGTATGTAGGGGAGGAGGT
GGTAGTGGGACGATGGGACAGGGGGTAAATGGTTCACTGTACATGCATGC
ATGGTGATATAAATTTCGCTGGTGGTGATATTACCATGGCCGCCGTCATG
CACTGTTTAATCAATGCGAAAGGTACCTCTTATCCTCCGTCCCTCTTTCC
ATTTCTCACTGCTTTCCTTCCCCCCTCCTTCCCTCCCTCTTTCATCTCTC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCCCCCGACCCAAGTCCGCA
CCCTCGTCCAGAATCTCCGCACGGGCGCAACACTCACCAGTGTACTGGCA
GCTCTTGCCATGGCCGCCGTCATGCACCACGCCGAGCGGGAGAAGGAGGG
AGGGACCGAGGGAGGGACCGAGGGAGGGACGGGGAGGGGGAGGGGGAAGG
CAGTGATGGAGGCACGGTTGAAGGCGGCGCAGGTGGCAGTTAAGGAATGC
TACAACTGCTGGTATAAGCTTCCCTTCGCCCTCCCCCCTTCCATCTCTCT
CTATGTCCATTCCTTTTACTTTCCACTAAATCGAAGACTCTAAAATCCTG
CATACCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTGCCTGCTACCTTT
CTCTCTTCCTCAGTCCCGACATTCCCCGCATCGTCAAGGCCCTGGTAGAG
GGCGGTTTGGAAGCCATGCAGACGGCCTGTGAGGTAGCTGTAGGCACGCC
GGTCAAACCTATGCTTGCCAAGATCTGCAGGTAGGGAGGGAGGGAAAGGA
GGGGGGGGGAAAGAGGGCGTTGTGTAGATTTTCCTGCCAGATGACTGATC
CTTTCCTCCCTCCTTCCCTCCCTCCCTTCCTTCCTCCTTTCCTTTCTTAC
TCCCTAAGCGGTATTCCTGAGCTCATGGAGAAATACGGTTCCGAGCCGTT
TACTTGTGAATTCAAATACGACGGCCAACGGGCCCAAGTACACCTCCTCA
GCGACGGGAGCGTCAAGATTTTCAATCGCCATATCGAGGTCCGTACCCTC
CACTCTCCCTATCACCCTCCCTCCCTCTCTCCTTCCTTCCATTTTTCCCT
TCCTTCACTTCACGCTCTTTTCCTCTTCCCGTACACCCCTTTTCACCTCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCCTCCCAG
GACATGACTGACAAATACCCTGACGTCGTCCAGCTGATGCACGACCTGCA
ACGAGCCCTCCGTTCCTCCCCCCCTTCCTCTCTCCCTCCCTCCCCCTCCG
AGCAACCGTTGGTAGACGTCATCCTGGACACAGAACTCGTGGCTGTGGAC
CGAGCGCAGGGCAACAAGCTCCTGGCCTTTCAGACGTTGTCAACCCGAGG
ACGGTATGAAGGGAGGGAGGGAAAGAAGTGAGGGAGGAGGGAGGGAGGGA
GGGAGGGAGGGGATGCGCGGTGTTCAGAACTATGACCTCTTGTCAATCCT
TGTCTTTTTCCCTCCCTCCCTCCCTCTCCCTCCCTCCCTCCCTCCCTCTC
TCCCTCCCTCCCTCCCTCCGTCGCAGCAAGGACGTGACCGCCGAGGGGGT
CACGGTGCAAATCTGCGTGTTTGCCTTTGATCTCCTCTTCCTCAATGGGC
AGTCGCATCTCAAGGAGCATCTTGAATCCCGGCGAACCCTCCTGTACTCC
CTCTTTGCACCTGTGGTGGAGGGAGGGAAGGAGAGAGGGAAGGAGGGAGG
GAAGGAGGGGGGGTTTGAAGGTCGTTTTGACTTTGCGACCCATAGAGAGA
CGAAGGACCCGGAAAAGGTGCAGGAATTTTTCACAGAAGCTTTGGAGGCA
GGATGCGAAGGGATCATGGTGAGGGAGGGGGGGAGGGAGGGAGGGAGGGT
GATTGTATGTATATACCGTTAATAGGGCACGATTTCTCTCATTCTTGCTC
TCTGCTTCCCCCGCTCTCCTTCCTTTCAAACTAGTGCAAGTCCCTCTCCC
ACGAGTATGAGCCGTCCAAGCGGACTGAATCCTGGCTGAAGGTGAAGAAA
GATTACATCGAGGGTTTGCATGACACTCTCGACCTGGTCCCTATCGGCGC
CTGGTACATACCCCTCCATCCCTCCCTCCATCCCTCCCTCCATCCCTCCC
TCCATTTCTCCTTCCATCCCTCTCTTCCCCCGTCCCTGCGCTTTTCTTCC
AGTCTAGGCGCATGCCCTTCTTTCTTCTTTGTCTTGTCGTCCGATCCTCT
TTTTCCCTCCCTCCCTCCCTCCCTTTCCTACAGGTACGGCAACGGCCGCA
AGGCCGGTTGGTTCTCTCCCATCCTCCTCGCCTGCTACAACCCCGAGACC
GAAGAGCTCCAGTCCCTCTGTCGGTGCATGTCGGGATTAACCGATGCCAT
GTACGCCGACACCACCAAATTTTATCAGAGTGAGGGGAGGATCATTGACG
CGCCTAAGAGTTACGTCAGGACAGGGGAGACGTGCCCGATATGGTTCGAC
CCCTGTCAGGTTTGGGAGATACGGGGGGCGGAACTGACCATAAGCCCGGT
GCATAAGGCAGGGGTGGGGTTGGTAGACAAGCAGAAGGGGATGAGTTTGA
GGTTTCCGCGCTTTTTGAAGGTGAGGGAGGATAAGGGGGTGGAGGACGCA
ACGACTGCGGCGCAGATAGCAGAGTTGTTCAGGATGCAGATTAGGAGGGT
AGAGGTGGAGGGGGATGGGGAGGGTAAAGGAGGGGGCGGAGGGAAGCAGA
AGGTGGCAGCGGAGGAAGAGGAAGGAGGAGGGGTCGAGGAAGCGGAAGAT
TACTGGGAAGATATTTTGTAAGTGGAGGGTGTAAGAGGGGAGGTAGAGTT
TAATGATTCAAAGAGAAGGACGAGGACATAGCTAGTGTACAGCAAGCCCT
GGACCGACAAGCAGCCCGTGGCATATGCCAATGGGACGCAAAGAAGAAGA
AAACTGAAGATAGTCCCGTG

Coding sequence (CDS) from alignment at chr11:940490..945409-

>NO11G03000.1 ID=NO11G03000.1|Name=NO11G03000.1|organism=Nannochloropsis oceanica|type=CDS|length=2733bp|location=Sequence derived from alignment at chr11:940490..945409- (Nannochloropsis oceanica)
ATGCCTCCCAAGAAGCGCAAGGCCGCCATGACCAGTGGTGCCAGCCCCGC
GACAACAAAGGCTAAGGGCACGAACGGATTAGCTGGCAAAGTCCCCTCGA
CACCTGGCCAGACGAATATCACTGCCTTTTTCGGTGGGGGCGGCGACGGC
GGCGGCGGCGGGTCGGCTGCTGCTTCTCCTAGCGCTGCTGCTGCCATGGC
TGCTGCCTCTTCTGCAGGCACAAAGAAGCAAAAGAATTCGGCAGAGATGG
TGGATCTTCTTACCTCGGAAGAAGACGGTGTTCATGACGACGAAGTGGAG
GAGGAGCAACAGGAAGTGCTCCCGCAGATTGACCTGACAGCCACCGAAAC
AAAAGAGCGACATGAGACCCAAGCCTTGACCGAGGCCATGGAGAAGCTGC
CGGAACGCGAAGCCAAGGATTTTGTCGACGAGATGGGCGCTGGCAAACAG
CATAAACCAGAAAGAGACGGGAAGAATAAATCGGCCACGATACCTTTGCC
CACTCCTCCTACATCTCCCTCAGCCTTCTTCAGTGCCGCCGGTGCCGCTA
GCAGCAAAGCCACCGCCTCCATGACTGGCAGCCCCGTCGACCTTCCGTGT
GCACGTTATCAGCCCTCCTCTGACGGTTGTTGGTCTCGGGGGCAGCTGGC
GCCTTACTTGCACCTTGCTTGGGCGTTCGAGCTGCTTTGTTCCACCACCC
GCCGCCTGACAAAAGCCGATGTCCTCGTCAACATGTTTCGGTCGCTTATG
GCCCTGGCCCCGGACGACGTCCTCCCTGCTGTGTATTTGTCAAGCAACAA
GCTGGCCTCGTCGTTTGAGGGCATCGATATCAATGTGGGCGGCTCGACGG
TGTCTGCGGCGGTGATTCACGCCACTGGGACGTCGTCAGACAAGATGAAG
CAGTTGTATACGGAGTTGGGGGATCTCGGGGATGTGGCGCAAGCCCTGCG
AGTGAAGCAGCGCCTCCTCGTGGTCCCTGAGCCCCTGACGGTGCGAGGCG
TCTATCAGACTATAATCGATATGGCCAGCATGAAAGGGCAAGGATGCGAG
GGTCGGAAACGCATGATGATGGTGCGTCTCATTCGCTCGTGTCGAGGCCC
CGAAGCCAAGTTCCTAGTCCGCACCCTCGTCCAGAATCTCCGCACGGGCG
CAACACTCACCAGTGTACTGGCAGCTCTTGCCATGGCCGCCGTCATGCAC
CACGCCGAGCGGGAGAAGGAGGGAGGGACCGAGGGAGGGACCGAGGGAGG
GACGGGGAGGGGGAGGGGGAAGGCAGTGATGGAGGCACGGTTGAAGGCGG
CGCAGGTGGCAGTTAAGGAATGCTACAACTGCTGTCCCGACATTCCCCGC
ATCGTCAAGGCCCTGGTAGAGGGCGGTTTGGAAGCCATGCAGACGGCCTG
TGAGGTAGCTGTAGGCACGCCGGTCAAACCTATGCTTGCCAAGATCTGCA
GCGGTATTCCTGAGCTCATGGAGAAATACGGTTCCGAGCCGTTTACTTGT
GAATTCAAATACGACGGCCAACGGGCCCAAGTACACCTCCTCAGCGACGG
GAGCGTCAAGATTTTCAATCGCCATATCGAGGACATGACTGACAAATACC
CTGACGTCGTCCAGCTGATGCACGACCTGCAACGAGCCCTCCGTTCCTCC
CCCCCTTCCTCTCTCCCTCCCTCCCCCTCCGAGCAACCGTTGGTAGACGT
CATCCTGGACACAGAACTCGTGGCTGTGGACCGAGCGCAGGGCAACAAGC
TCCTGGCCTTTCAGACGTTGTCAACCCGAGGACGCAAGGACGTGACCGCC
GAGGGGGTCACGGTGCAAATCTGCGTGTTTGCCTTTGATCTCCTCTTCCT
CAATGGGCAGTCGCATCTCAAGGAGCATCTTGAATCCCGGCGAACCCTCC
TGTACTCCCTCTTTGCACCTGTGGTGGAGGGAGGGAAGGAGAGAGGGAAG
GAGGGAGGGAAGGAGGGGGGGTTTGAAGGTCGTTTTGACTTTGCGACCCA
TAGAGAGACGAAGGACCCGGAAAAGGTGCAGGAATTTTTCACAGAAGCTT
TGGAGGCAGGATGCGAAGGGATCATGTGCAAGTCCCTCTCCCACGAGTAT
GAGCCGTCCAAGCGGACTGAATCCTGGCTGAAGGTGAAGAAAGATTACAT
CGAGGGTTTGCATGACACTCTCGACCTGGTCCCTATCGGCGCCTGGTACG
GCAACGGCCGCAAGGCCGGTTGGTTCTCTCCCATCCTCCTCGCCTGCTAC
AACCCCGAGACCGAAGAGCTCCAGTCCCTCTGTCGGTGCATGTCGGGATT
AACCGATGCCATGTACGCCGACACCACCAAATTTTATCAGAGTGAGGGGA
GGATCATTGACGCGCCTAAGAGTTACGTCAGGACAGGGGAGACGTGCCCG
ATATGGTTCGACCCCTGTCAGGTTTGGGAGATACGGGGGGCGGAACTGAC
CATAAGCCCGGTGCATAAGGCAGGGGTGGGGTTGGTAGACAAGCAGAAGG
GGATGAGTTTGAGGTTTCCGCGCTTTTTGAAGGTGAGGGAGGATAAGGGG
GTGGAGGACGCAACGACTGCGGCGCAGATAGCAGAGTTGTTCAGGATGCA
GATTAGGAGGGTAGAGGTGGAGGGGGATGGGGAGGGTAAAGGAGGGGGCG
GAGGGAAGCAGAAGGTGGCAGCGGAGGAAGAGGAAGGAGGAGGGGTCGAG
GAAGCGGAAGATTACTGGGAAGATATTTTGTAA

Synonyms

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