NO11G02310.1, NO11G02310.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO11G02310.1
Unique NameNO11G02310.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length906
Alignment locationchr11:743844..744749 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:743844..744749 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO11G02310.1 vs.
Match: EWM24993.1 (aurora kinase a [Nannochloropsis gaditana])

HSP 1 Score: 536.6 bits (1381), Expect = 5.100e-149
Identity = 263/295 (89.15%), Postives = 275/295 (93.22%), Query Frame = 0 
Query:    1 MQSSSSASSSSLPPHPPYLHLPATQLRGWCLHDFEIGRPLGKGKFGTVYLARERRSKYVVALKVLRKTQLLKGGVEHQLRREIEIQTHLRHRNILRMFGYFFDERRIYLILEYAPRGELYKQLTAKGKFSERLSAQYLLELSQALAFCHTKHVIHRDIKPENLLVGHKGELKIADFGWSVHAPSSKRNTLCGTLDYLPPEMIEGRAHDAMVDVWSLGVLLYEFLVGHPPFEAEGHSATYRRIARVDLHFPRDMSEGARDLISRLLKKDPRVRISLTEISQHPWIVQQTAGRASPS 296
            MQS SS S+SS+P   P+ HL     RGWCL DFEIGRPLG+GKFG VYLARERRSKYVVALKVLRK+QLLKGGVEHQLRREIEIQTHLRHRNILRMFGYFFDERRIYLILEYAPRGELYKQLT+KGKFSERLSA+YLLELS+ALAFCHTKHVIHRDIKPENLLVGHKGELKIADFGWSVHAPSSKRNTLCGTLDYLPPEMIEGRAHDAMVDVWSLGVLLYEFLVGHPPFEAEGHSATYRRIARVDLHFP  +SEGA+DLISRLLKKDPRVR+SL EISQHPWIV+QT  R  PS
Sbjct:    1 MQSVSSTSTSSMPSCLPHSHLQDAPARGWCLQDFEIGRPLGRGKFGMVYLARERRSKYVVALKVLRKSQLLKGGVEHQLRREIEIQTHLRHRNILRMFGYFFDERRIYLILEYAPRGELYKQLTSKGKFSERLSARYLLELSEALAFCHTKHVIHRDIKPENLLVGHKGELKIADFGWSVHAPSSKRNTLCGTLDYLPPEMIEGRAHDAMVDVWSLGVLLYEFLVGHPPFEAEGHSATYRRIARVDLHFPSWVSEGAQDLISRLLKKDPRVRMSLVEISQHPWIVEQTGDRVLPS 295
The following BLAST results are available for this feature:
BLAST of NO11G02310.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM24993.15.100e-14989.15aurora kinase a [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02310NO11G02310Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO11G02310.1NO11G02310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO11G02310.1.cds1NO11G02310.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO11G02310.1 ID=NO11G02310.1|Name=NO11G02310.1|organism=Nannochloropsis oceanica|type=mRNA|length=906bp
ATGCAATCTTCGTCCTCCGCCTCCTCTTCTTCCTTGCCACCACATCCGCC
GTATCTGCACCTCCCAGCGACACAGCTGCGGGGCTGGTGCTTGCATGACT
TCGAGATCGGCCGTCCCTTGGGCAAGGGAAAATTCGGCACCGTGTACCTG
GCCCGGGAACGCCGCAGCAAGTATGTTGTAGCCCTCAAGGTGTTGCGCAA
GACCCAGTTGCTCAAGGGCGGAGTGGAGCACCAACTGCGCCGGGAAATCG
AGATCCAGACGCATTTAAGACATCGCAACATCCTGCGAATGTTTGGGTAT
TTCTTTGATGAGCGACGAATCTACTTGATTCTGGAATATGCCCCGCGGGG
AGAGCTTTATAAGCAGCTGACGGCCAAGGGCAAGTTCTCGGAGCGGCTCT
CCGCGCAGTATTTGTTGGAGTTGTCGCAGGCCTTGGCGTTCTGCCATACC
AAGCATGTGATCCATCGGGACATCAAGCCTGAGAATCTCCTGGTGGGTCA
CAAAGGTGAATTGAAAATTGCTGATTTCGGGTGGTCTGTGCATGCGCCAT
CGTCGAAGCGGAATACGTTGTGTGGAACTCTGGATTACTTACCCCCTGAG
ATGATTGAAGGACGGGCGCACGATGCCATGGTGGACGTCTGGAGTCTTGG
AGTATTGCTGTATGAATTTTTGGTGGGCCACCCGCCGTTTGAGGCGGAGG
GACACTCGGCGACGTATCGAAGGATTGCGAGGGTGGACCTGCATTTTCCG
AGGGACATGTCGGAGGGGGCCCGGGACCTGATTTCGCGGTTGTTGAAAAA
GGACCCCCGGGTGCGGATTTCATTGACTGAGATCTCCCAGCATCCGTGGA
TTGTGCAGCAGACGGCGGGGAGGGCGTCGCCGTCGGCTTTGGGAAGGGCA
GCGTAG
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protein sequence of NO11G02310.1

>NO11G02310.1-protein ID=NO11G02310.1-protein|Name=NO11G02310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=302bp
MQSSSSASSSSLPPHPPYLHLPATQLRGWCLHDFEIGRPLGKGKFGTVYL
ARERRSKYVVALKVLRKTQLLKGGVEHQLRREIEIQTHLRHRNILRMFGY
FFDERRIYLILEYAPRGELYKQLTAKGKFSERLSAQYLLELSQALAFCHT
KHVIHRDIKPENLLVGHKGELKIADFGWSVHAPSSKRNTLCGTLDYLPPE
MIEGRAHDAMVDVWSLGVLLYEFLVGHPPFEAEGHSATYRRIARVDLHFP
RDMSEGARDLISRLLKKDPRVRISLTEISQHPWIVQQTAGRASPSALGRA
A*
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mRNA from alignment at chr11:743844..744749-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO11G02310.1 ID=NO11G02310.1|Name=NO11G02310.1|organism=Nannochloropsis oceanica|type=mRNA|length=906bp|location=Sequence derived from alignment at chr11:743844..744749- (Nannochloropsis oceanica)
ATGCAATCTTCGTCCTCCGCCTCCTCTTCTTCCTTGCCACCACATCCGCC
GTATCTGCACCTCCCAGCGACACAGCTGCGGGGCTGGTGCTTGCATGACT
TCGAGATCGGCCGTCCCTTGGGCAAGGGAAAATTCGGCACCGTGTACCTG
GCCCGGGAACGCCGCAGCAAGTATGTTGTAGCCCTCAAGGTGTTGCGCAA
GACCCAGTTGCTCAAGGGCGGAGTGGAGCACCAACTGCGCCGGGAAATCG
AGATCCAGACGCATTTAAGACATCGCAACATCCTGCGAATGTTTGGGTAT
TTCTTTGATGAGCGACGAATCTACTTGATTCTGGAATATGCCCCGCGGGG
AGAGCTTTATAAGCAGCTGACGGCCAAGGGCAAGTTCTCGGAGCGGCTCT
CCGCGCAGTATTTGTTGGAGTTGTCGCAGGCCTTGGCGTTCTGCCATACC
AAGCATGTGATCCATCGGGACATCAAGCCTGAGAATCTCCTGGTGGGTCA
CAAAGGTGAATTGAAAATTGCTGATTTCGGGTGGTCTGTGCATGCGCCAT
CGTCGAAGCGGAATACGTTGTGTGGAACTCTGGATTACTTACCCCCTGAG
ATGATTGAAGGACGGGCGCACGATGCCATGGTGGACGTCTGGAGTCTTGG
AGTATTGCTGTATGAATTTTTGGTGGGCCACCCGCCGTTTGAGGCGGAGG
GACACTCGGCGACGTATCGAAGGATTGCGAGGGTGGACCTGCATTTTCCG
AGGGACATGTCGGAGGGGGCCCGGGACCTGATTTCGCGGTTGTTGAAAAA
GGACCCCCGGGTGCGGATTTCATTGACTGAGATCTCCCAGCATCCGTGGA
TTGTGCAGCAGACGGCGGGGAGGGCGTCGCCGTCGGCTTTGGGAAGGGCA
GCGTAG
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Coding sequence (CDS) from alignment at chr11:743844..744749-

>NO11G02310.1 ID=NO11G02310.1|Name=NO11G02310.1|organism=Nannochloropsis oceanica|type=CDS|length=906bp|location=Sequence derived from alignment at chr11:743844..744749- (Nannochloropsis oceanica)
ATGCAATCTTCGTCCTCCGCCTCCTCTTCTTCCTTGCCACCACATCCGCC
GTATCTGCACCTCCCAGCGACACAGCTGCGGGGCTGGTGCTTGCATGACT
TCGAGATCGGCCGTCCCTTGGGCAAGGGAAAATTCGGCACCGTGTACCTG
GCCCGGGAACGCCGCAGCAAGTATGTTGTAGCCCTCAAGGTGTTGCGCAA
GACCCAGTTGCTCAAGGGCGGAGTGGAGCACCAACTGCGCCGGGAAATCG
AGATCCAGACGCATTTAAGACATCGCAACATCCTGCGAATGTTTGGGTAT
TTCTTTGATGAGCGACGAATCTACTTGATTCTGGAATATGCCCCGCGGGG
AGAGCTTTATAAGCAGCTGACGGCCAAGGGCAAGTTCTCGGAGCGGCTCT
CCGCGCAGTATTTGTTGGAGTTGTCGCAGGCCTTGGCGTTCTGCCATACC
AAGCATGTGATCCATCGGGACATCAAGCCTGAGAATCTCCTGGTGGGTCA
CAAAGGTGAATTGAAAATTGCTGATTTCGGGTGGTCTGTGCATGCGCCAT
CGTCGAAGCGGAATACGTTGTGTGGAACTCTGGATTACTTACCCCCTGAG
ATGATTGAAGGACGGGCGCACGATGCCATGGTGGACGTCTGGAGTCTTGG
AGTATTGCTGTATGAATTTTTGGTGGGCCACCCGCCGTTTGAGGCGGAGG
GACACTCGGCGACGTATCGAAGGATTGCGAGGGTGGACCTGCATTTTCCG
AGGGACATGTCGGAGGGGGCCCGGGACCTGATTTCGCGGTTGTTGAAAAA
GGACCCCCGGGTGCGGATTTCATTGACTGAGATCTCCCAGCATCCGTGGA
TTGTGCAGCAGACGGCGGGGAGGGCGTCGCCGTCGGCTTTGGGAAGGGCA
GCGTAG
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Synonyms
Publications