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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr11 | genome | chr11:658848..661430 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO11G02060.1 vs.
Match: EWM25003.1 (alkaline phosphatase d [Nannochloropsis gaditana]) HSP 1 Score: 667.2 bits (1720), Expect = 4.000e-188 Identity = 323/451 (71.62%), Postives = 376/451 (83.37%), Query Frame = 0
Query: 22 RQPGITLCMGIPMLLGMVLLCSFTGAVVMDQSNTV-----EIDGHYENQTLTRLAFGSCNKQWRTNLLWNHIVDFRPQAYLWLGDAVYVKEKEGDNEANLRKAYARQLKNEGYQRLLHTGAVIEGVYDDHDMSTNDGHRVNYTPQRQAAYLDFLGHIPPSSPRRSRLGLFSSHVFGVAPQQVKIIFMDVRSLSDNPALNLPAWIADFMWPVKPYLLALTRWTAVLLGVTKRFQGDMLGAEQWAWLEGQLEKSEASMHILVSSVQLLSVNPIVEGWGHYPAAQARLLALLRKYRPRGLVVLSGDVHFSELLVTQ-PEEWVDEEE---GREALEVTSSGMTHTCFATTMGMCEMAVQRYDRHRLSPSSVYGGLNYGTVEVDWEKQEAWVDVRNKRGESVLQTRRRLDRDSPGAALGEPWSINNNNDLYFFILALMSIALVTYAVFWVVRGLVR 464
R PG+ L + I +L ++ +Q +T+ E+DGHYENQTLTR+AFGSCNKQWRTN+LW++IVDF PQAYLWLGDAVYVKEKEGDN+ANLR+AY+RQLKN+GYQRLL +GA+IEGVYDDHDMSTNDGH+VNYTPQRQ+AYLDFLGH+ SPRRSRLGLFS+HVFG P+QVK+IF+DVRSLSD PA+ +P +A+ +WPVKPYLLALTRW AVLLG+T RF GDMLG EQW+WLE QL SEAS H+LVS+VQ+LSVNPI EGWGHYPAAQ+RLLALLRK+RPRGLV+LSGDVHF+ELLVTQ P E + EEE +EALEVTSSGMTHTCFATTMG CEMAV RYDRHRL+P S +GGLNYGT+E+DWE+QEAWV VRNKRGE+VLQT RRLD SPGA LGEPWSIN NNDL FFI A + + + V WV R L++
Sbjct: 9 RMPGLMLVLSIFFTF---MLQEHLFSLAEEQGDTMKQMAAELDGHYENQTLTRVAFGSCNKQWRTNVLWDNIVDFHPQAYLWLGDAVYVKEKEGDNDANLRRAYSRQLKNKGYQRLLSSGAIIEGVYDDHDMSTNDGHKVNYTPQRQSAYLDFLGHVSEDSPRRSRLGLFSAHVFGEPPRQVKVIFLDVRSLSDEPAIVVPECVANLLWPVKPYLLALTRWAAVLLGITGRFHGDMLGTEQWSWLEAQLAGSEASFHVLVSTVQVLSVNPIAEGWGHYPAAQSRLLALLRKHRPRGLVILSGDVHFAELLVTQPPSEGMREEEKEGKKEALEVTSSGMTHTCFATTMGTCEMAVDRYDRHRLTPCSFFGGLNYGTIELDWEQQEAWVRVRNKRGEAVLQTFRRLDGSSPGAYLGEPWSINENNDLSFFIFAFLCVVSLASGVLWVFRWLLK 456
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO11G02060.1 ID=NO11G02060.1|Name=NO11G02060.1|organism=Nannochloropsis oceanica|type=mRNA|length=2362bp
TTTAAAACTCGGCAAAGGTAAGGGAAGAATATGCAACAATTTATTGTCGG
AAGATTTTCCCTTGTGTGTAATCCTAAGAGGAGGCACGCTAGCGTAAACA
CTTGCGTTTGCATTTGTCTGCGGATTGGTTGTACGCGATAATTTTAGGAA
AGTTGGGAAACTACAGAAAAAGCGAGGTCGATCGCTGAGATTCCTTGTCC
GTGATGAAACGCACAGGCCACATCCTCACTGCAAACATAGCTACACTGAC
ACTTCCCTTGCACTTGCAACAGAGGCTATAGGTGTATGTCCGATTTTTCC
TTACACCACAAATCTACGTACACAGACACGTCGTCTGTCGCTGCCGATGC
TTCTTCGCCTTCGCAGGGAACGACGTCCTCAACTTGCCCCTGTCCCCAAG
TCCAGGATAAGACAGCCGGGGATAACACTGTGCATGGGTATACCCATGCT
GCTTGGAATGGTACTGCTGTGCTCTTTCACTGGCGCGGTGGTCATGGACC
AAAGCAACACGGTGGAGATTGACGGCCACTACGAGAATCAGACGCTTACA
CGCCTGGCCTTTGGCTCGTGCAACAAACAGTGGCGCACGAACCTTTTATG
GAACCACATCGTTGATTTCCGGCCCCAAGCTTATCTCTGGTTAGGCGATG
CAGTTTATGTCAAGGAAAAAGAGGGCGACAATGAAGCAAACCTTCGCAAA
GCCTACGCCCGCCAGTTAAAAAACGAGGGTTACCAACGATTATTACACAC
GGGGGCTGTCATTGAGGGTGTGTATGACGACCATGACATGTCTACGAATG
ATGGGCATCGTGTGAACTACACCCCCCAACGGCAAGCGGCCTACCTCGAC
TTCCTCGGCCACATCCCCCCTTCCTCCCCCCGCCGTTCGCGCCTCGGCCT
CTTCTCCTCCCATGTCTTCGGGGTCGCGCCACAACAAGTCAAGATTATTT
TCATGGACGTTCGCTCGCTGAGCGACAATCCCGCCCTGAATCTCCCTGCG
TGGATCGCTGACTTCATGTGGCCGGTCAAGCCGTATTTGCTTGCCCTGAC
CCGGTGGACTGCCGTCTTGCTTGGAGTCACCAAGAGGTTTCAAGGCGACA
TGCTGGGGGCCGAGCAGTGGGCTTGGCTAGAAGGGCAGTTGGAAAAATCG
GAGGCTTCCATGCATATACTCGTCTCGTCCGTGCAGCTGTTATCGGTGAA
CCCGATTGTGGAAGGGTGGGGACATTACCCTGCAGCCCAAGCACGCCTGT
TGGCCTTGTTGCGGAAGTACCGACCGAGAGGGTTGGTGGTCCTGTCGGGG
GATGTACATTTTTCTGAGCTACTGGTGACGCAGCCGGAGGAGTGGGTGGA
TGAAGAGGAAGGGAGGGAGGCTTTGGAAGTGACGAGCAGTGGCATGACGC
ACACGTGTTTTGCGACGACTATGGGGATGTGTGAGATGGCCGTGCAGAGG
TATGATCGACATCGGTTGAGTCCATCGAGTGTTTACGGAGGCTTAAATTA
TGGCACGGTTGAAGTGGACTGGGAGAAACAAGAAGCGTGGGTGGATGTGA
GGAACAAAAGGGGGGAATCTGTATTGCAGACGCGGAGGAGGTTGGACAGG
GATAGTCCTGGGGCGGCGTTGGGAGAGCCGTGGTCCATCAACAATAATAA
TGATTTGTACTTCTTTATTTTGGCCTTGATGTCCATTGCACTGGTGACGT
ATGCTGTGTTCTGGGTGGTGCGGGGGTTGGTTAGGTGGAAGGGGCGGCGT
TTTGGGACGATGGTGGGAGGCGCAGGGGGCAATAAGGCGAATAAGTACTC
GAAGAAAGAAGCATAAGGGGGAAGAAGGGAAGGAAAGAGGGAGAGAGATA
GGAGCAAGGGCTTGTAGTGACAGAGCAGGACTTGTACAGCAACAGCAGCA
GCCAGCGTGGCAGGGGCAGACAGTCAGTGTGTGTGAAAGTATGTCCGTGC
GTGTGTGCGGCAGTATGGAAAAAAACAAAGCACCACGTGGGGAAAACACA
TGTAGGGTAGTGCGATCGAAAAGAAAGGAACCTAAGCATTATCAATCAAA
TGTTTCTCTTGCATTGTGAGATGGTATGTCATCGCGCGATTCGTGCTGCT
GGGATAGAGCTGGGTTCGCGTAGCTTTTTCGAAGTACCTCCCAAAGTCCG
AGTCTGCCGCGCGTGCTGGTGTCTGCATTCCATAAATCTTTTTGTCCTTG
CTTTCCTTTTCACTCCCTTCTTTTCCCTCTACAACCATTTTTTGATGACC
ACGACAAGCTTTCCACGGTGTCGTAATGCAGGGATGCCACACACTTGACT
CACAATAACGAGGAACACGACACCTGGTGTGCCATATTCAAACGGGCCGT
TTGAGAGCTTCC back to topprotein sequence of NO11G02060.1 >NO11G02060.1-protein ID=NO11G02060.1-protein|Name=NO11G02060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=490bp
MLLRLRRERRPQLAPVPKSRIRQPGITLCMGIPMLLGMVLLCSFTGAVVM
DQSNTVEIDGHYENQTLTRLAFGSCNKQWRTNLLWNHIVDFRPQAYLWLG
DAVYVKEKEGDNEANLRKAYARQLKNEGYQRLLHTGAVIEGVYDDHDMST
NDGHRVNYTPQRQAAYLDFLGHIPPSSPRRSRLGLFSSHVFGVAPQQVKI
IFMDVRSLSDNPALNLPAWIADFMWPVKPYLLALTRWTAVLLGVTKRFQG
DMLGAEQWAWLEGQLEKSEASMHILVSSVQLLSVNPIVEGWGHYPAAQAR
LLALLRKYRPRGLVVLSGDVHFSELLVTQPEEWVDEEEGREALEVTSSGM
THTCFATTMGMCEMAVQRYDRHRLSPSSVYGGLNYGTVEVDWEKQEAWVD
VRNKRGESVLQTRRRLDRDSPGAALGEPWSINNNNDLYFFILALMSIALV
TYAVFWVVRGLVRWKGRRFGTMVGGAGGNKANKYSKKEA* back to topmRNA from alignment at chr11:658848..661430- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO11G02060.1 ID=NO11G02060.1|Name=NO11G02060.1|organism=Nannochloropsis oceanica|type=mRNA|length=2583bp|location=Sequence derived from alignment at chr11:658848..661430- (Nannochloropsis oceanica)
TTTAAAACTCGGCAAAGGTAAGGGAAGAATATGCAACAATTTATTGTCGG
AAGATTTTCCCTTGTGTGTAATCCTAAGAGGAGGCACGCTAGCGTAAACA
CTTGCGTTTGCATTTGTCTGCGGATTGGTTGTACGCGATAATTTTAGGAA
AGTTGGGAAACTACAGAAAAAGCGAGGTCGATCGCTGAGATTCCTTGTCC
GTGATGAAACGCACAGGCCACATCCTCACTGCAAACATAGCTACACTGAC
ACTTCCCTTGCACTTGCAACAGAGGCTATAGGTGTATGTCCGATTTTTCC
TTACACCACAAATCTACGTACACAGACACGTCGTCTGTCGCTGCCGATGC
TTCTTCGCCTTCGCAGGGAACGACGTCCTCAACTTGCCCCTGTCCCCAAG
TCCAGGATAAGACAGCCGGGGATAACACTGTGCATGGGTATACCCATGCT
GCTTGGAATGGTACTGCTGTGCTCTTTCACTGGCGCGGTGGTCATGGACC
AAAGCAACACGGTGGAGATTGACGGCCACTACGAGAATCAGACGCTTACA
CGCCTGGCCTTTGGCTCGTGCAACAAACAGGTGTGTTTATCTGCATGAGC
GTATGTCCTTTTCTCCATCTTTCTCATCCTCTCTCCTTACCCATCCGTCC
TCCCCCTCTTTCAAAAAATCAGTGGCGCACGAACCTTTTATGGAACCACA
TCGTTGATTTCCGGCCCCAAGCTTATCTCTGGTTAGGCGATGCAGTTTAT
GTCAAGGAAAAAGAGGGCGACAATGAAGCAAACCTTCGCAAAGCCTACGC
CCGCCAGTTAAAAAACGAGGGTTACCAACGATTATTACACACGGGGGCTG
TCATTGAGGGTGTGTATGACGACCATGACATGTCTACGAATGATGGGCAT
CGTGTGGTAAGTGTGGTCCTAGGGGAGGCCGGCGAAGTGTCAATTGCTGT
CCTTCTTTGACTTCTTCACCCTCGCACCATTCACCACTCAACGTATCCCT
CCTCCATCGCCCTGGAAACGTAACGTAACATACAGAACTACACCCCCCAA
CGGCAAGCGGCCTACCTCGACTTCCTCGGCCACATCCCCCCTTCCTCCCC
CCGCCGTTCGCGCCTCGGCCTCTTCTCCTCCCATGTCTTCGGGGTCGCGC
CACAACAAGTCAAGATTATTTTCATGGACGTTCGCTCGCTGAGCGACAAT
CCCGCCCTGAATCTCCCTGCGTGGATCGCTGACTTCATGTGGCCGGTCAA
GCCGTATTTGCTTGCCCTGACCCGGTGGACTGCCGTCTTGCTTGGAGTCA
CCAAGAGGTTTCAAGGCGACATGCTGGGGGCCGAGCAGTGGGCTTGGCTA
GAAGGGCAGTTGGAAAAATCGGAGGCTTCCATGCATATACTCGTCTCGTC
CGTGCAGCTGTTATCGGTGAACCCGATTGTGGAAGGGTGGGGACATTACC
CTGCAGCCCAAGCACGCCTGTTGGCCTTGTTGCGGAAGTACCGACCGAGA
GGGTTGGTGGTCCTGTCGGGGGATGTACATTTTTCTGAGCTACTGGTGAC
GCAGCCGGAGGAGTGGGTGGATGAAGAGGAAGGGAGGGAGGCTTTGGAAG
TGACGAGCAGTGGCATGACGCACACGTGTTTTGCGACGACTATGGGGATG
TGTGAGATGGCCGTGCAGAGGTATGATCGACATCGGTTGAGTCCATCGAG
TGTTTACGGAGGCTTAAATTATGGCACGGTTGAAGTGGACTGGGAGAAAC
AAGAAGCGTGGGTGGATGTGAGGAACAAAAGGGGGGAATCTGTATTGCAG
ACGCGGAGGAGGTTGGACAGGGATAGTCCTGGGGCGGCGTTGGGAGAGCC
GTGGTCCATCAACAATAATAATGATTTGTACTTCTTTATTTTGGCCTTGA
TGTCCATTGCACTGGTGACGTATGCTGTGTTCTGGGTGGTGCGGGGGTTG
GTTAGGTGGAAGGGGCGGCGTTTTGGGACGATGGTGGGAGGCGCAGGGGG
CAATAAGGCGAATAAGTACTCGAAGAAAGAAGCATAAGGGGGAAGAAGGG
AAGGAAAGAGGGAGAGAGATAGGAGCAAGGGCTTGTAGTGACAGAGCAGG
ACTTGTACAGCAACAGCAGCAGCCAGCGTGGCAGGGGCAGACAGTCAGTG
TGTGTGAAAGTATGTCCGTGCGTGTGTGCGGCAGTATGGAAAAAAACAAA
GCACCACGTGGGGAAAACACATGTAGGGTAGTGCGATCGAAAAGAAAGGA
ACCTAAGCATTATCAATCAAATGTTTCTCTTGCATTGTGAGATGGTATGT
CATCGCGCGATTCGTGCTGCTGGGATAGAGCTGGGTTCGCGTAGCTTTTT
CGAAGTACCTCCCAAAGTCCGAGTCTGCCGCGCGTGCTGGTGTCTGCATT
CCATAAATCTTTTTGTCCTTGCTTTCCTTTTCACTCCCTTCTTTTCCCTC
TACAACCATTTTTTGATGACCACGACAAGCTTTCCACGGTGTCGTAATGC
AGGGATGCCACACACTTGACTCACAATAACGAGGAACACGACACCTGGTG
TGCCATATTCAAACGGGCCGTTTGAGAGCTTCC back to topCoding sequence (CDS) from alignment at chr11:658848..661430- >NO11G02060.1 ID=NO11G02060.1|Name=NO11G02060.1|organism=Nannochloropsis oceanica|type=CDS|length=1470bp|location=Sequence derived from alignment at chr11:658848..661430- (Nannochloropsis oceanica)
ATGCTTCTTCGCCTTCGCAGGGAACGACGTCCTCAACTTGCCCCTGTCCC
CAAGTCCAGGATAAGACAGCCGGGGATAACACTGTGCATGGGTATACCCA
TGCTGCTTGGAATGGTACTGCTGTGCTCTTTCACTGGCGCGGTGGTCATG
GACCAAAGCAACACGGTGGAGATTGACGGCCACTACGAGAATCAGACGCT
TACACGCCTGGCCTTTGGCTCGTGCAACAAACAGTGGCGCACGAACCTTT
TATGGAACCACATCGTTGATTTCCGGCCCCAAGCTTATCTCTGGTTAGGC
GATGCAGTTTATGTCAAGGAAAAAGAGGGCGACAATGAAGCAAACCTTCG
CAAAGCCTACGCCCGCCAGTTAAAAAACGAGGGTTACCAACGATTATTAC
ACACGGGGGCTGTCATTGAGGGTGTGTATGACGACCATGACATGTCTACG
AATGATGGGCATCGTGTGAACTACACCCCCCAACGGCAAGCGGCCTACCT
CGACTTCCTCGGCCACATCCCCCCTTCCTCCCCCCGCCGTTCGCGCCTCG
GCCTCTTCTCCTCCCATGTCTTCGGGGTCGCGCCACAACAAGTCAAGATT
ATTTTCATGGACGTTCGCTCGCTGAGCGACAATCCCGCCCTGAATCTCCC
TGCGTGGATCGCTGACTTCATGTGGCCGGTCAAGCCGTATTTGCTTGCCC
TGACCCGGTGGACTGCCGTCTTGCTTGGAGTCACCAAGAGGTTTCAAGGC
GACATGCTGGGGGCCGAGCAGTGGGCTTGGCTAGAAGGGCAGTTGGAAAA
ATCGGAGGCTTCCATGCATATACTCGTCTCGTCCGTGCAGCTGTTATCGG
TGAACCCGATTGTGGAAGGGTGGGGACATTACCCTGCAGCCCAAGCACGC
CTGTTGGCCTTGTTGCGGAAGTACCGACCGAGAGGGTTGGTGGTCCTGTC
GGGGGATGTACATTTTTCTGAGCTACTGGTGACGCAGCCGGAGGAGTGGG
TGGATGAAGAGGAAGGGAGGGAGGCTTTGGAAGTGACGAGCAGTGGCATG
ACGCACACGTGTTTTGCGACGACTATGGGGATGTGTGAGATGGCCGTGCA
GAGGTATGATCGACATCGGTTGAGTCCATCGAGTGTTTACGGAGGCTTAA
ATTATGGCACGGTTGAAGTGGACTGGGAGAAACAAGAAGCGTGGGTGGAT
GTGAGGAACAAAAGGGGGGAATCTGTATTGCAGACGCGGAGGAGGTTGGA
CAGGGATAGTCCTGGGGCGGCGTTGGGAGAGCCGTGGTCCATCAACAATA
ATAATGATTTGTACTTCTTTATTTTGGCCTTGATGTCCATTGCACTGGTG
ACGTATGCTGTGTTCTGGGTGGTGCGGGGGTTGGTTAGGTGGAAGGGGCG
GCGTTTTGGGACGATGGTGGGAGGCGCAGGGGGCAATAAGGCGAATAAGT
ACTCGAAGAAAGAAGCATAA back to top
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