NO11G01970.1, NO11G01970.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G01970.1
Unique Name	NO11G01970.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3657
Alignment location	chr11:636929..640816 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:636929..640816 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO11G01970.1 vs.
Match: EWM25018.1 (Armadillo-like helical [Nannochloropsis gaditana])

HSP 1 Score: 822.4 bits (2123), Expect = 1.000e-234
Identity = 450/660 (68.18%), Postives = 504/660 (76.36%), Query Frame = 0

Query:    7 SSSSSSSSGEGLGSRGGYGYETGEGGGRGNYRLPTTEGHHNQTQASQPPSETEKEELRKGLDEIARVLSKAPKLSQPAVPPPSSSNSSSGNIDPAHAKNEPNNTLVPPTAAAATAAAATAGAASAAAEEDDLQEQLHAAKSLRHLLSTHREVLIHEVHDKNWIPCLLGWLRLSHCPPIQVEALWALTNIAAGNTENTGMLLKHNPIPALVSLLDSPNEEVLEQAVWVIGNIAGEGASSRDIVLSNHALPPLVQCILSHQQSQQILRIGSWALNNLCDSQPRPALDIHILMPVLHALLRSEDSEVLSHTCWALSHLCDGPSTHIKVVVEASLCGRLVQLLQHRSWRVIKPALRTIGNIVCAEDEVDYTQSILEAGAVPHLKILIGHSNREIQKEACWTLSNIAAGTCEQIQTVLDSGAIPLLVSLALQPADMTDAEVRSEACWVVLNATSCGSDSQIEFLVKEGCIGVLSDLLGESNMVMMALEGLERILQVGEDEGLRLGTANPYACMLSPWKIEELESHKQLGIAKRAGRIWKEHFVTCAICNRTFSKQAPEVRFCGECKCFVCGGCNCMVFHLSYQEELWMEMSVKEASAKEALMASKRSRKQRKKQKEKEKKQAGKGVGAAAAAAGGGGGHQEGRGDRRVVRWWVAGRGKKRREEVK 667
            ++ SSS SG   G  G +G   GE    GN RLPTTEGHH+     Q  S  E E+LR+ LDEI   LS+A K +    PPPS  +      D         +   P   A  +    T G A           QL AAK LR+LLSTHREVLIHEV ++NWIP LL WL+L H P IQVEALWALTNIAAGNTE+T MLL+H+P+P LV LL+SP+E+VLEQA+WV+GNIAGEGA+SRD VL+N AL PLV CIL HQ SQ++LRIGSWALNNLCD  PRP LDI +LMPVL  L++  DSEVLSHTCWALSHLCDGPS HIKVVVEA+LCGRLV+LLQHRSWRV KPALRTIGNIVCAEDEVDYTQ ILEAGAVP+L+ LI HSNREIQKEACWTLSNIAAGTC+QIQTVLDSGAIPLLV LALQP   TDAEVRSEACWVVLNATSCGSD+QIEFLV++GC+ VL DLLGE+NMVMMALEGLER+LQVGE+EGLR GTANPYA ML   KIEELE H+Q GIAKRA RIWK+HFVTCAIC +TFSKQAP+VRFCGECKC+VC  CNC VFHLSYQEELW EMSVKEASAKEAL ASKR+RK R+KQKEKEKK    G G      GGGGG + G G+         G GK+  +E K
Sbjct:    2 ANRSSSWSGGYCGDSGAHG---GEEQAAGNCRLPTTEGHHH-AHTHQATSALEMEQLRRELDEIENGLSRASKPTYNIEPPPSKGSQICSPSDTGDHVAAKADASAPLARAPTSRDHGTEGVAL----------QLQAAKKLRNLLSTHREVLIHEVLERNWIPRLLEWLQLDH-PTIQVEALWALTNIAAGNTEHTNMLLRHDPVPVLVKLLESPHEDVLEQAIWVLGNIAGEGAASRDTVLANGALEPLVHCILQHQCSQKVLRIGSWALNNLCDPTPRPTLDIAVLMPVLLTLIQCPDSEVLSHTCWALSHLCDGPSAHIKVVVEANLCGRLVELLQHRSWRVTKPALRTIGNIVCAEDEVDYTQYILEAGAVPYLRALISHSNREIQKEACWTLSNIAAGTCDQIQTVLDSGAIPLLVELALQPPAETDAEVRSEACWVVLNATSCGSDAQIEFLVRQGCVQVLGDLLGEANMVMMALEGLERMLQVGEEEGLRSGTANPYAAMLPAGKIEELEHHRQPGIAKRASRIWKDHFVTCAICQQTFSKQAPDVRFCGECKCYVCVKCNCTVFHLSYQEELWNEMSVKEASAKEALQASKRNRKARRKQKEKEKKAKATGTG-----GGGGGGGKAGSGE---------GGGKEINDEEK 632

The following BLAST results are available for this feature:

BLAST of NO11G01970.1 vs.

BLAST of NO11G01970.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25018.1	1.000e-234	68.18	Armadillo-like helical [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO11G01970	NO11G01970	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO11G01970.1	NO11G01970.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO11G01970.1.cds1	NO11G01970.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G01970.1.cds2	NO11G01970.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr11:636929..640816-
coding sequence from alignment at chr11:636929..640816-

mRNA sequence

>NO11G01970.1 ID=NO11G01970.1|Name=NO11G01970.1|organism=Nannochloropsis oceanica|type=mRNA|length=3657bp
CCAGGGCCTCGCCGCGAGGCTACCCGGGAGATCTCATCCATTGCACAAGC
TCTCCCTTACTTGGCCAAGCATCCAGCCTGAAGGTACCTATATGTACAAA
CAGCCCACAAGACAACCGTGCCTGGTTGAAAGCACGTGGGGGCTTGACTG
GGTCTGGTGTGGGCGTGGCCACAAGACCGGCCCCGGCGATTGGTCTCATG
GGGAGAGTTTCTCATCTCAAGTTCTGATCGCGCTCTCACACTACAACGAC
CCACACACAACCTTACATGCAGATTGGACAACGATGGGGCTATAAACCCG
CTAAATGGATCAGCGCTGCCATGTTGGAGAGCAAGGCTCACCAAGGCTCA
CCGCCAGGCCTCGTCCTGCGCTCCCCCTCCTTCATCAGTCCTCACGCCCT
CCCTCATCCCTCAACCAACACCACATGCACAGGCGAGGCACAGAAAAGAC
CAGCTAATGTGCATATCACCAACAAGGAAGTAGCAAATATTGTAGCAGCA
GCAGCAGGCGTAGCACAGCCGCAGCATCATCACCAGGAGCAGCAGAATGG
TGACAGGCAGTAGCAGCAGCAGCAGCAGCAGTAGCTCAGGGGAAGGTTTG
GGAAGCAGAGGCGGGTATGGTTATGAGACTGGAGAAGGAGGTGGAAGAGG
TAATTATAGATTGCCAACGACCGAAGGGCATCACAATCAGACTCAAGCCA
GTCAACCACCCAGCGAAACGGAAAAGGAGGAGCTTCGAAAGGGGCTCGAC
GAAATTGCCCGTGTCCTCAGCAAAGCCCCCAAATTGTCGCAGCCCGCTGT
CCCTCCCCCTTCCTCCTCAAACAGCAGCAGCGGCAATATAGACCCAGCCC
ACGCAAAAAATGAACCAAACAATACCCTGGTCCCTCCTACAGCAGCAGCA
GCAACAGCAGCAGCAGCAACAGCCGGAGCAGCGTCAGCAGCAGCAGAAGA
AGATGACTTGCAAGAGCAATTGCACGCAGCCAAGTCCCTCCGCCACCTTC
TATCCACCCATCGAGAAGTGCTCATCCACGAGGTCCACGACAAGAACTGG
ATTCCCTGCCTCCTGGGGTGGCTCAGGCTCTCCCATTGTCCCCCCATCCA
AGTCGAGGCCCTTTGGGCATTGACTAACATCGCAGCCGGTAACACCGAGA
ACACCGGCATGCTTCTAAAACACAACCCCATTCCGGCCCTTGTTTCCCTC
CTCGACTCTCCGAACGAAGAGGTGCTCGAGCAAGCAGTGTGGGTGATTGG
AAACATAGCAGGAGAAGGGGCCTCGTCGAGGGATATCGTCCTAAGCAACC
ATGCTCTCCCCCCGCTCGTGCAATGCATCTTGTCCCACCAGCAAAGCCAG
CAGATTCTCCGCATTGGGTCCTGGGCATTAAACAACCTCTGTGACTCCCA
ACCCCGGCCGGCGCTCGACATCCACATTCTCATGCCCGTGCTTCACGCCT
TGCTACGCTCAGAGGACTCTGAAGTCCTCTCCCATACCTGTTGGGCCCTC
TCCCACCTCTGTGACGGTCCTAGCACACACATCAAGGTGGTAGTCGAAGC
CAGCCTGTGCGGGAGACTGGTGCAATTACTCCAGCATCGGTCCTGGAGGG
TGATCAAGCCAGCGTTGCGAACCATTGGAAACATCGTGTGTGCGGAGGAT
GAGGTGGATTACACACAGTCCATTCTTGAGGCCGGGGCGGTGCCGCATTT
GAAGATCTTGATTGGACATTCCAATCGGGAGATCCAGAAAGAAGCGTGCT
GGACGCTGTCGAACATAGCCGCTGGGACCTGTGAACAGATTCAGACGGTG
TTGGACTCGGGGGCGATTCCGCTGTTGGTGTCGTTGGCGCTGCAACCTGC
GGACATGACGGACGCGGAGGTGAGGAGTGAGGCGTGCTGGGTGGTGTTGA
ACGCGACGAGCTGTGGATCGGATTCCCAGATCGAGTTTTTGGTGAAGGAA
GGTTGTATCGGCGTGCTGAGCGATTTGCTCGGCGAGTCAAATATGGTGAT
GATGGCGCTGGAAGGCTTGGAAAGGATACTGCAGGTGGGGGAGGATGAAG
GGCTGAGGTTAGGGACGGCGAATCCCTATGCGTGCATGTTGTCTCCGTGG
AAGATTGAAGAGCTGGAGAGCCACAAGCAGCTGGGGATTGCGAAACGAGC
AGGGCGGATCTGGAAGGAGCATTTTGTGACGTGCGCGATATGTAATCGAA
CGTTTTCGAAACAGGCGCCGGAGGTGAGGTTTTGCGGGGAGTGCAAGTGC
TTCGTGTGTGGGGGTTGTAATTGTATGGTGTTCCACCTGAGCTACCAGGA
GGAGTTGTGGATGGAGATGAGTGTGAAGGAGGCAAGTGCTAAGGAGGCGT
TGATGGCCAGTAAGCGAAGTCGGAAGCAGAGGAAGAAGCAGAAGGAGAAG
GAAAAGAAGCAGGCAGGCAAGGGAGTAGGAGCAGCAGCAGCAGCAGCAGG
AGGAGGGGGGGGGCATCAGGAGGGGAGGGGGGATCGGAGAGTGGTCAGGT
GGTGGGTTGCGGGGAGGGGGAAGAAAAGAAGGGAGGAAGTGAAGGAGTAG
TGCCAGGGTCGTCCGCAGGGAATGACGATGACTCGTCCTTATCTTCAGGG
GAGGGAGGCTCTCCAAGAAGAGCAGCAGTCCAATCTCCGAGACAACCCCT
ACCACTATTATCATCAGCAGCAACAGCATCAGCAACAGCAGCAACAGCAG
CAACAGCACCGCCACCAAAAGCAGGAGGAAGAGATGGAGAAGTGAAGGCA
GCCGAGATCAAGGCGCTCGGGGCGACTGGAACAGCAGCTGCGGGAGGGAC
CAGGGCTGCTCTTGGAGAGGGAGGGAGGCGTGGTCGAGATCGAGACGAGG
GGGCAGAGGAGGGAGGGGTCGAGACGGCATCTACTAGGAGAAGTGGTGAT
GGTGGTATGGTGCGCAAGGCACCTGGGGGAACGAAGACCAATCACTCCCC
TGCCTCGTCCTCGACTTCGGTGCCCGCACCAGCAACCGTGCATGAAGAAG
CAGCACCCATGAATGGTGGTGGTAGTAAGCGGCGGGGGCGGAACCGGGGG
AATGCTGGCGGAGAGGAGGCGATGGTCGCTCCTGTGTCTGTGAAGAGTGA
GAGCGCTGCTCCTACTTCTGCGCACGCCACTGGCAGTGGCAAGGCTGTCG
GTGCTGCGGCGACTACTGACGCCAGCGCAGGGAAGTCTGAAAAGAAAATG
GACGCTGGCGTCGCTGGTGCCATAGGAGGAGGGGAGGAATGTGGTGATGG
CGCCAATGGCATCGATTTGGTCGATTACTTGCAGTCCACAGGCTCTATAA
TTGCCCTCTCCAAGTTTCTGGACCAGGAGGACGGGGGAGACCATGATGAG
GACGGAGGAAACACTGATGGGTTGTTTGGATAGACTCAACGTGGCAAAAT
GAAGTACATATGGGGTGTGCGTGTTTATTTTTTAGGGGCAGGACATACAT
GACACCGGAGAAGTAGCAGCGGTAGGCGTATTAACCTTAGTGAGTGCATG
TAGCTCTCAGCCCATCTCGAAATCTTGAGAATGCGGGCATCCAATTACTC
TCCCCCCGGTATGCATAAGCAGCTGCCCACGTGACAGTCACGTTTCAGTT
GTTGGCATGAAGCATAAATAAAATTACAAAAGAAATACGGCGAACAGAAA
CGACATG

protein sequence of NO11G01970.1

>NO11G01970.1-protein ID=NO11G01970.1-protein|Name=NO11G01970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=668bp
MVTGSSSSSSSSSSGEGLGSRGGYGYETGEGGGRGNYRLPTTEGHHNQTQ
ASQPPSETEKEELRKGLDEIARVLSKAPKLSQPAVPPPSSSNSSSGNIDP
AHAKNEPNNTLVPPTAAAATAAAATAGAASAAAEEDDLQEQLHAAKSLRH
LLSTHREVLIHEVHDKNWIPCLLGWLRLSHCPPIQVEALWALTNIAAGNT
ENTGMLLKHNPIPALVSLLDSPNEEVLEQAVWVIGNIAGEGASSRDIVLS
NHALPPLVQCILSHQQSQQILRIGSWALNNLCDSQPRPALDIHILMPVLH
ALLRSEDSEVLSHTCWALSHLCDGPSTHIKVVVEASLCGRLVQLLQHRSW
RVIKPALRTIGNIVCAEDEVDYTQSILEAGAVPHLKILIGHSNREIQKEA
CWTLSNIAAGTCEQIQTVLDSGAIPLLVSLALQPADMTDAEVRSEACWVV
LNATSCGSDSQIEFLVKEGCIGVLSDLLGESNMVMMALEGLERILQVGED
EGLRLGTANPYACMLSPWKIEELESHKQLGIAKRAGRIWKEHFVTCAICN
RTFSKQAPEVRFCGECKCFVCGGCNCMVFHLSYQEELWMEMSVKEASAKE
ALMASKRSRKQRKKQKEKEKKQAGKGVGAAAAAAGGGGGHQEGRGDRRVV
RWWVAGRGKKRREEVKE*

mRNA from alignment at chr11:636929..640816-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO11G01970.1 ID=NO11G01970.1|Name=NO11G01970.1|organism=Nannochloropsis oceanica|type=mRNA|length=3888bp|location=Sequence derived from alignment at chr11:636929..640816- (Nannochloropsis oceanica)
CCAGGGCCTCGCCGCGAGGCTACCCGGGAGATCTCATCCATTGCACAAGC
TCTCCCTTACTTGGCCAAGCATCCAGCCTGAAGGTACCTATATGTACAAA
CAGCCCACAAGACAACCGTGCCTGGTTGAAAGCACGTGGGGGCTTGACTG
GGTCTGGTGTGGGCGTGGCCACAAGACCGGCCCCGGCGATTGGTCTCATG
GGGAGAGTTTCTCATCTCAAGTTCTGATCGCGCTCTCACACTACAACGAC
CCACACACAACCTTACATGCAGATTGGACAACGATGGGGCTATAAACCCG
CTAAATGGATCAGCGCTGCCATGTTGGAGAGCAAGGCTCACCAAGGCTCA
CCGCCAGGCCTCGTCCTGCGCTCCCCCTCCTTCATCAGTCCTCACGCCCT
CCCTCATCCCTCAACCAACACCACATGCACAGGCGAGGCACAGAAAAGAC
CAGCTAATGTGCATATCACCAACAAGGAAGTAGCAAATATTGTAGCAGCA
GCAGCAGGCGTAGCACAGCCGCAGCATCATCACCAGGAGCAGCAGAATGG
TGACAGGCAGTAGCAGCAGCAGCAGCAGCAGTAGCTCAGGGGAAGGTTTG
GGAAGCAGAGGCGGGTATGGTTATGAGACTGGAGAAGGAGGTGGAAGAGG
TAATTATAGATTGCCAACGACCGAAGGTAAGGCGGTCGCGGGTGGCTTGG
GGAGAGGAGGTAGGAGGAGGGATGGATGAACGATTGAGCACAGCATGTGG
GTCCCATGTTCGGCATACCATCCTTTTGCATGTTTGCGAGCTGGACGTTT
ATCTGATCTGTTAAGCAGTTTCGGTGTGCATTTAGTCCCAGCGACCTGCC
TCATGCTTTCCATCCACCGTTGTCGCAATTATCTCACATCTTCCCCTTCT
CCCGCAGGGCATCACAATCAGACTCAAGCCAGTCAACCACCCAGCGAAAC
GGAAAAGGAGGAGCTTCGAAAGGGGCTCGACGAAATTGCCCGTGTCCTCA
GCAAAGCCCCCAAATTGTCGCAGCCCGCTGTCCCTCCCCCTTCCTCCTCA
AACAGCAGCAGCGGCAATATAGACCCAGCCCACGCAAAAAATGAACCAAA
CAATACCCTGGTCCCTCCTACAGCAGCAGCAGCAACAGCAGCAGCAGCAA
CAGCCGGAGCAGCGTCAGCAGCAGCAGAAGAAGATGACTTGCAAGAGCAA
TTGCACGCAGCCAAGTCCCTCCGCCACCTTCTATCCACCCATCGAGAAGT
GCTCATCCACGAGGTCCACGACAAGAACTGGATTCCCTGCCTCCTGGGGT
GGCTCAGGCTCTCCCATTGTCCCCCCATCCAAGTCGAGGCCCTTTGGGCA
TTGACTAACATCGCAGCCGGTAACACCGAGAACACCGGCATGCTTCTAAA
ACACAACCCCATTCCGGCCCTTGTTTCCCTCCTCGACTCTCCGAACGAAG
AGGTGCTCGAGCAAGCAGTGTGGGTGATTGGAAACATAGCAGGAGAAGGG
GCCTCGTCGAGGGATATCGTCCTAAGCAACCATGCTCTCCCCCCGCTCGT
GCAATGCATCTTGTCCCACCAGCAAAGCCAGCAGATTCTCCGCATTGGGT
CCTGGGCATTAAACAACCTCTGTGACTCCCAACCCCGGCCGGCGCTCGAC
ATCCACATTCTCATGCCCGTGCTTCACGCCTTGCTACGCTCAGAGGACTC
TGAAGTCCTCTCCCATACCTGTTGGGCCCTCTCCCACCTCTGTGACGGTC
CTAGCACACACATCAAGGTGGTAGTCGAAGCCAGCCTGTGCGGGAGACTG
GTGCAATTACTCCAGCATCGGTCCTGGAGGGTGATCAAGCCAGCGTTGCG
AACCATTGGAAACATCGTGTGTGCGGAGGATGAGGTGGATTACACACAGT
CCATTCTTGAGGCCGGGGCGGTGCCGCATTTGAAGATCTTGATTGGACAT
TCCAATCGGGAGATCCAGAAAGAAGCGTGCTGGACGCTGTCGAACATAGC
CGCTGGGACCTGTGAACAGATTCAGACGGTGTTGGACTCGGGGGCGATTC
CGCTGTTGGTGTCGTTGGCGCTGCAACCTGCGGACATGACGGACGCGGAG
GTGAGGAGTGAGGCGTGCTGGGTGGTGTTGAACGCGACGAGCTGTGGATC
GGATTCCCAGATCGAGTTTTTGGTGAAGGAAGGTTGTATCGGCGTGCTGA
GCGATTTGCTCGGCGAGTCAAATATGGTGATGATGGCGCTGGAAGGCTTG
GAAAGGATACTGCAGGTGGGGGAGGATGAAGGGCTGAGGTTAGGGACGGC
GAATCCCTATGCGTGCATGTTGTCTCCGTGGAAGATTGAAGAGCTGGAGA
GCCACAAGCAGCTGGGGATTGCGAAACGAGCAGGGCGGATCTGGAAGGAG
CATTTTGTGACGTGCGCGATATGTAATCGAACGTTTTCGAAACAGGCGCC
GGAGGTGAGGTTTTGCGGGGAGTGCAAGTGCTTCGTGTGTGGGGGTTGTA
ATTGTATGGTGTTCCACCTGAGCTACCAGGAGGAGTTGTGGATGGAGATG
AGTGTGAAGGAGGCAAGTGCTAAGGAGGCGTTGATGGCCAGTAAGCGAAG
TCGGAAGCAGAGGAAGAAGCAGAAGGAGAAGGAAAAGAAGCAGGCAGGCA
AGGGAGTAGGAGCAGCAGCAGCAGCAGCAGGAGGAGGGGGGGGGCATCAG
GAGGGGAGGGGGGATCGGAGAGTGGTCAGGTGGTGGGTTGCGGGGAGGGG
GAAGAAAAGAAGGGAGGAAGTGAAGGAGTAGTGCCAGGGTCGTCCGCAGG
GAATGACGATGACTCGTCCTTATCTTCAGGGGAGGGAGGCTCTCCAAGAA
GAGCAGCAGTCCAATCTCCGAGACAACCCCTACCACTATTATCATCAGCA
GCAACAGCATCAGCAACAGCAGCAACAGCAGCAACAGCACCGCCACCAAA
AGCAGGAGGAAGAGATGGAGAAGTGAAGGCAGCCGAGATCAAGGCGCTCG
GGGCGACTGGAACAGCAGCTGCGGGAGGGACCAGGGCTGCTCTTGGAGAG
GGAGGGAGGCGTGGTCGAGATCGAGACGAGGGGGCAGAGGAGGGAGGGGT
CGAGACGGCATCTACTAGGAGAAGTGGTGATGGTGGTATGGTGCGCAAGG
CACCTGGGGGAACGAAGACCAATCACTCCCCTGCCTCGTCCTCGACTTCG
GTGCCCGCACCAGCAACCGTGCATGAAGAAGCAGCACCCATGAATGGTGG
TGGTAGTAAGCGGCGGGGGCGGAACCGGGGGAATGCTGGCGGAGAGGAGG
CGATGGTCGCTCCTGTGTCTGTGAAGAGTGAGAGCGCTGCTCCTACTTCT
GCGCACGCCACTGGCAGTGGCAAGGCTGTCGGTGCTGCGGCGACTACTGA
CGCCAGCGCAGGGAAGTCTGAAAAGAAAATGGACGCTGGCGTCGCTGGTG
CCATAGGAGGAGGGGAGGAATGTGGTGATGGCGCCAATGGCATCGATTTG
GTCGATTACTTGCAGTCCACAGGCTCTATAATTGCCCTCTCCAAGTTTCT
GGACCAGGAGGACGGGGGAGACCATGATGAGGACGGAGGAAACACTGATG
GGTTGTTTGGATAGACTCAACGTGGCAAAATGAAGTACATATGGGGTGTG
CGTGTTTATTTTTTAGGGGCAGGACATACATGACACCGGAGAAGTAGCAG
CGGTAGGCGTATTAACCTTAGTGAGTGCATGTAGCTCTCAGCCCATCTCG
AAATCTTGAGAATGCGGGCATCCAATTACTCTCCCCCCGGTATGCATAAG
CAGCTGCCCACGTGACAGTCACGTTTCAGTTGTTGGCATGAAGCATAAAT
AAAATTACAAAAGAAATACGGCGAACAGAAACGACATG

Coding sequence (CDS) from alignment at chr11:636929..640816-

>NO11G01970.1 ID=NO11G01970.1|Name=NO11G01970.1|organism=Nannochloropsis oceanica|type=CDS|length=2004bp|location=Sequence derived from alignment at chr11:636929..640816- (Nannochloropsis oceanica)
ATGGTGACAGGCAGTAGCAGCAGCAGCAGCAGCAGTAGCTCAGGGGAAGG
TTTGGGAAGCAGAGGCGGGTATGGTTATGAGACTGGAGAAGGAGGTGGAA
GAGGTAATTATAGATTGCCAACGACCGAAGGGCATCACAATCAGACTCAA
GCCAGTCAACCACCCAGCGAAACGGAAAAGGAGGAGCTTCGAAAGGGGCT
CGACGAAATTGCCCGTGTCCTCAGCAAAGCCCCCAAATTGTCGCAGCCCG
CTGTCCCTCCCCCTTCCTCCTCAAACAGCAGCAGCGGCAATATAGACCCA
GCCCACGCAAAAAATGAACCAAACAATACCCTGGTCCCTCCTACAGCAGC
AGCAGCAACAGCAGCAGCAGCAACAGCCGGAGCAGCGTCAGCAGCAGCAG
AAGAAGATGACTTGCAAGAGCAATTGCACGCAGCCAAGTCCCTCCGCCAC
CTTCTATCCACCCATCGAGAAGTGCTCATCCACGAGGTCCACGACAAGAA
CTGGATTCCCTGCCTCCTGGGGTGGCTCAGGCTCTCCCATTGTCCCCCCA
TCCAAGTCGAGGCCCTTTGGGCATTGACTAACATCGCAGCCGGTAACACC
GAGAACACCGGCATGCTTCTAAAACACAACCCCATTCCGGCCCTTGTTTC
CCTCCTCGACTCTCCGAACGAAGAGGTGCTCGAGCAAGCAGTGTGGGTGA
TTGGAAACATAGCAGGAGAAGGGGCCTCGTCGAGGGATATCGTCCTAAGC
AACCATGCTCTCCCCCCGCTCGTGCAATGCATCTTGTCCCACCAGCAAAG
CCAGCAGATTCTCCGCATTGGGTCCTGGGCATTAAACAACCTCTGTGACT
CCCAACCCCGGCCGGCGCTCGACATCCACATTCTCATGCCCGTGCTTCAC
GCCTTGCTACGCTCAGAGGACTCTGAAGTCCTCTCCCATACCTGTTGGGC
CCTCTCCCACCTCTGTGACGGTCCTAGCACACACATCAAGGTGGTAGTCG
AAGCCAGCCTGTGCGGGAGACTGGTGCAATTACTCCAGCATCGGTCCTGG
AGGGTGATCAAGCCAGCGTTGCGAACCATTGGAAACATCGTGTGTGCGGA
GGATGAGGTGGATTACACACAGTCCATTCTTGAGGCCGGGGCGGTGCCGC
ATTTGAAGATCTTGATTGGACATTCCAATCGGGAGATCCAGAAAGAAGCG
TGCTGGACGCTGTCGAACATAGCCGCTGGGACCTGTGAACAGATTCAGAC
GGTGTTGGACTCGGGGGCGATTCCGCTGTTGGTGTCGTTGGCGCTGCAAC
CTGCGGACATGACGGACGCGGAGGTGAGGAGTGAGGCGTGCTGGGTGGTG
TTGAACGCGACGAGCTGTGGATCGGATTCCCAGATCGAGTTTTTGGTGAA
GGAAGGTTGTATCGGCGTGCTGAGCGATTTGCTCGGCGAGTCAAATATGG
TGATGATGGCGCTGGAAGGCTTGGAAAGGATACTGCAGGTGGGGGAGGAT
GAAGGGCTGAGGTTAGGGACGGCGAATCCCTATGCGTGCATGTTGTCTCC
GTGGAAGATTGAAGAGCTGGAGAGCCACAAGCAGCTGGGGATTGCGAAAC
GAGCAGGGCGGATCTGGAAGGAGCATTTTGTGACGTGCGCGATATGTAAT
CGAACGTTTTCGAAACAGGCGCCGGAGGTGAGGTTTTGCGGGGAGTGCAA
GTGCTTCGTGTGTGGGGGTTGTAATTGTATGGTGTTCCACCTGAGCTACC
AGGAGGAGTTGTGGATGGAGATGAGTGTGAAGGAGGCAAGTGCTAAGGAG
GCGTTGATGGCCAGTAAGCGAAGTCGGAAGCAGAGGAAGAAGCAGAAGGA
GAAGGAAAAGAAGCAGGCAGGCAAGGGAGTAGGAGCAGCAGCAGCAGCAG
CAGGAGGAGGGGGGGGGCATCAGGAGGGGAGGGGGGATCGGAGAGTGGTC
AGGTGGTGGGTTGCGGGGAGGGGGAAGAAAAGAAGGGAGGAAGTGAAGGA
GTAG

Synonyms

Publications