NO11G00880.1, NO11G00880.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO11G00880.1
Unique NameNO11G00880.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4438
Alignment locationchr11:345201..349745 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:345201..349745 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO11G00880.1 vs.
Match: EWM25123.1 (hypothetical protein Naga_100016g52 [Nannochloropsis gaditana])

HSP 1 Score: 329.7 bits (844), Expect = 2.500e-86
Identity = 240/574 (41.81%), Postives = 325/574 (56.62%), Query Frame = 0
Query:  225 RPGRAAAAFAKLTSRSSSTSIANTGDAGGGNNSAGGQSSATYDINAKKSTYKKSHYVSEAPKRLELVADRHSKGTLLNATIRIKNPDVRTKAFGWSHRGDNFFALALMSVKGERILPELYKDVPLRYRIAALASKLDSK--GEEINTEEVLYDEAGQSTVGGLFYFRVPQFKTPGRYSISFRFSREAPSAFRKIDPVSQIVLVVPIDGSASSSSTSNSSNNNNENNVKNNNNDNNNNREKKSNTNQEEAGPQTFGLGDLTDSTEKARSLRSQERNLGGSSMAFSAALLGEGGGSRDCFSVDCAAGTGGNAGSKRQQSLEGRFASHVMQSPVFGLSLRDVEQRGRLVSLIIPAGLRLRLAEDWYAVTRKRYLTGNIPRGLTGCSGDADDGERGVKQRRELR--QLPNVKEVIWGYEKTLPSSSPVSLSSSDAKGSNGPMGERLCTLFDGALGNLLLYRFEMNQYLALLEGLKESKRPPHQVWGAEHLLRLLAITPRLLASESRGGSKISTDDDK-----DLEGEFSKEDGESASIVEQAEEARFYIQGLLNHLAEHQDTLFAPYEEQPRAFGLDV 790
            RP RAAA+ AK     +       G+A        G+   +     +K+  ++S  + EAP RLELVADRHSKG LL+A IRIK PDV  KAF WS R D +FAL + S KG RILPEL K+VPLRYRIA++ ++  ++   +E   EEVLYDEAG++T GG++YFRVPQFK PG YSISF+   + P+AF K+DPVSQIV                         V  +  ++ +    ++  N+  A P           T   RSLRSQ +   GS+   S A +G G       + D A G GGNA  + Q SLE   A+ V +     L+  ++  +G+L++L+IP  LR +L EDW+A+TR+R + G +PR          DG++ ++  ++    Q P+V EV+  YE+++P++S       D KG    +G RLCTLFDGALGN+LLYRFEM+QYL+LLE L    + PHQ+WGAEHLLRLLAI PRLL  +    +K   D++      + E     E     S   + E AR Y+QGLL+ L   Q +LFA Y E P  FGLDV
Sbjct:   79 RPSRAAASTAKARIGKTFEYRGTGGNAIAEKVHTNGEKKES---KPEKAAARQSGSLREAPHRLELVADRHSKGALLDALIRIKPPDVLMKAFKWSSRNDKYFALTVFSAKGNRILPELLKEVPLRYRIASVGARRSNETTSKETGEEEVLYDEAGKATHGGMYYFRVPQFKIPGCYSISFQL--QGPAAFNKLDPVSQIV-----------------------TVVPADALEHTDPFPPRAQENEAMALP-----------TGTLRSLRSQRQGAEGSA---SNAAVGRGS------TRDPALGGGGNA--RVQHSLEKHLAASVKEDTDSMLTFDELWLKGQLLTLVIPGALRQQLCEDWFAITRRRCVVGALPR---------HDGKKNIRLGKQTSNPQWPSVGEVVRMYERSIPAAS-----LGDFKG----LGARLCTLFDGALGNVLLYRFEMDQYLSLLE-LGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGS--REIEVARTYLQGLLDFLETEQASLFASYVEPPGKFGLDV 581          
The following BLAST results are available for this feature:
BLAST of NO11G00880.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25123.12.500e-8641.81hypothetical protein Naga_100016g52 [Nannochlorops... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00880NO11G00880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO11G00880.1NO11G00880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO11G00880.1.cds1NO11G00880.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO11G00880.1.cds2NO11G00880.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO11G00880.1 ID=NO11G00880.1|Name=NO11G00880.1|organism=Nannochloropsis oceanica|type=mRNA|length=4438bp
CGAGGATGAGCTGCCGGGAAGGGCACAGGGTGATCTTCATCTTCCCGGAT
ACGATTGTGGCTTATGAGATAGGAAGAAGACGGTGTTAGCGCTTCAACCT
CCAGCTTGATTTATTGCGTGTATTGGTGTATTGTGTGGTATTTCCATGTA
GCCATCGAAAAAGAATTCAAAATGCGCATATTTCCTTACGCTGGGACCAA
GCTGAGGGTATATATATGCCTGTATGCCCCTGGCCCCTCGAATGCGGACT
TCTGTTCACATACAACATATGAACTCGTAATATGTCTCTGGCGCGCGTGT
ACCCCCCCGCTAGAGGGCGCTAGCAGCAAGAAACTAACAAGCCAACGCCA
AGAAAAGCCCACTCGAATTTGTTTCGTGGCCTATGAGACAGCCTGTGCTA
TCTAGTAGTCACCACCGTGTGCAACCTCTGATGTTGTCTTCATACAGATT
GAGAGTGAATTCCCAGGGCACCTCACTCCTCCCGAAGAAAAGGAAATAGT
TTCAACAAGGACATCGTGTATTTTCCGTCTTTGTTGTGCGCCCTCCTCCC
TCAGAAATTCTCGCAGATTTAGGAATTAAGGCCAAGATAGAGAAGAGGAA
AAGATTCAGGGGAGGAGGGAGAAAGGAAAAAGGGTATGGCGCAAGAGGGT
AAGATCGCTCGAGGAACGAGGAAAGACAGATGCTGGGATGTATACTGAGT
GGACTTTGTCACGGGCTGAGGAATCTTCGACCCCAAAGTATGGAGAGAAA
TTGGATTTGATCAGGCGAGGAGAATGGGTAGGAAGTCGAACGGAAAGTGC
GTGCTTTTTTAGAGGCCAAAGAAGGACAATCCAAATTTGCCGGGTGAAGC
GTTGTATTCCCATTATGCCTCCCCTCTTAAACATCCCCCGTTAAGGAAAG
GAGACGAAATATCGTCCGATTAAATAGCTTTGTCACTGTCTTCCTCCAAC
ACTTGATTATCAACAATCGTCTCTACTCTCTTCTACTGGCTTCTTCATTT
ATCTAACCTTTTATGTGGCCTGTAAACGTTCTGCTGTTCCCCCCTCTTAT
GCTATCCCCTTACGACTGCCATCAAATTAACCATATTTCGTTTACCCGTT
TGCTCAACCAAGAAGCGCATGGGTGGGGCATGGGCATCTACCCAGCAATC
CAAAGCTTTGTGGACCTCCTCCTCGCACCTCGCCAGTCCTTTCACAGATA
GATAAATGACAGCAACGTCTGCCTTGTCTCGTGGTGACGGTGCGGATGCA
AGCAAAGTATTGAAACGTGCCAATAATGTATTCAACTGAGCTTGCGGAGT
GATAATGCCGTCATCAGGTCCGCTTGCGAGTGAGACGAAGGAGATGCTCC
CACCTCCGAGCATCACACGCGTACTGAATTTGGCCCCTGGCTCTGTGACG
TGGCCAATAGTCGTGAGGGGCACGGCTAGTGCTGTAGCTCCACCAAAGGT
CTGATGCCCATCATTAGACGTTGAACTCGTCGATCGCCTCACATTTTCCG
CTTGGCGCGTGGCCTCAACAATTTCGTCTTTTGTGAACCCCTTCCCGATC
AAAAAGGCCATTCTGGTATCGTCCGAGGACTGCTGAACTCGTTCCAGGGC
CAGGAAAGCTACCGCGCGACTCAGGTCTTTAGTGCTTCGTTTGGGAGAGG
CGCTGCTCATTGTAAACCTGCGTACATGTAGGGGGAGGTTCGGGATGCGT
AAATCTCGACATGAAAATATACCACCACCATCGAGCAAGAATAAAGCAAT
GGATTTTCTGGTGTGCATAGATATTGGGTCGAAAAATACCTAGCATATCT
CACACAAGCCGATTGAAGTGTTGCGACCTTCGCCGCCACCCTCGCTCTTC
AGGAAGCCCGCTATAGGATGGTATGGTAAGGCCTCGGAGGCAGTCAGAAT
ACAGGACGGCGAGGCTAAGTGTTTGAAGAGGTGGGATGAGATTCCTCAGG
CGCCTGTAAGAGGCTTTGAGGCGCTTGTAAGGCATTGGTCTACCAAAATG
TCTCCGTAAACTTGAGTTTTTGCCGAGGGCTTGATCCCCAGCAGAAAGAC
TTAGAGATGGCAAATGCTGGCAGACAGGCAGGCTCTTTTGTTTCCGCCCC
GTTGCAGAACGGGCTGGCGTTACTAATGTTGCCTGAAAATAACGTGAGTT
TTCCAGGAGGGCGTGGGTTACTTGACGAATGCACACTTTCTCATGTGCCT
CGCTCTCTCGTCATCACGACGGTCGCCGATTTTTCTCCCGCCACACTGTG
GCAGCCACTAGCAAACTCAATCCTGCAATCTTCCAAGACTCACAACTCAT
GCATAGCACACTCGTCGCAGCTAGTGATGCAAGATGATACGGCCATGGCA
CGGCCAGCAAATAGGACGCGAAGCAAACAGGCTGGTTTCACGGCCCTGTC
GCCAGCCCACCAACAACACACCATCACCGCGCAAGAAGAGGAGAAGTCGC
CGCAAAGTATTGTAGAAAAGAGTAGCGAGGCCGCTGGGCATGCGATTGCC
TCAACCATCAACAATAAAAAACATTGTAGGGAGGAGATAAGCGGAGTAGA
GGCTGCGCCAGGACTGCGCCGGCGTACTACGCGGGGGGGGGGCAGCAGCA
GCGCCCCCACGGCAAGCAGTAGCAGTGGCAACGGCCCTTTGACCATCAAA
CAGGAGGGACAAAAATCATATAACTCACGAGAAGGAGTACAAGTTGAAGT
ACCGGTAGTGCCGATCGTGAAGGAAGAGAGGCCTGGCCGGGCAGCGGCAG
CGTTTGCAAAACTGACCTCCCGCAGCAGCAGTACCAGCATCGCAAATACG
GGAGATGCCGGCGGTGGCAATAATTCGGCAGGCGGCCAATCTAGTGCCAC
TTATGACATAAATGCCAAAAAAAGTACATACAAAAAAAGTCACTATGTGT
CGGAGGCACCCAAGCGTCTCGAACTTGTGGCGGATCGACATTCAAAGGGC
ACCTTGCTCAACGCGACCATTCGGATCAAAAACCCCGACGTGCGAACGAA
GGCTTTTGGGTGGTCTCACCGTGGGGACAATTTTTTTGCTTTGGCCCTCA
TGAGCGTCAAGGGCGAAAGGATCCTGCCCGAGCTTTATAAAGACGTGCCG
CTTCGCTATCGCATTGCTGCCCTCGCGAGTAAACTGGACAGTAAGGGAGA
GGAGATCAACACGGAAGAGGTGCTGTACGACGAGGCAGGCCAGTCTACTG
TCGGCGGACTTTTCTACTTCCGAGTCCCGCAGTTCAAGACTCCCGGCCGT
TATTCCATCTCATTCCGGTTTTCAAGAGAGGCTCCATCCGCCTTTCGCAA
GATTGATCCCGTCTCACAGATCGTGTTGGTGGTGCCGATTGACGGGTCTG
CTAGCAGCAGCAGCACAAGCAACAGCAGCAACAACAACAATGAAAACAAC
GTCAAAAACAACAACAACGACAACAACAACAACAGGGAGAAAAAATCCAA
CACCAATCAAGAGGAAGCAGGTCCACAGACCTTTGGTCTGGGAGACCTGA
CGGATTCTACAGAAAAAGCACGGAGTCTACGTAGTCAAGAAAGGAATCTC
GGTGGCAGCAGCATGGCCTTCTCTGCAGCGTTACTAGGTGAGGGAGGAGG
ATCCAGAGATTGTTTCTCGGTCGATTGTGCTGCAGGAACTGGAGGGAACG
CAGGCAGTAAACGACAGCAGAGTCTTGAGGGGAGATTTGCATCGCATGTG
ATGCAGAGCCCGGTGTTCGGGCTGTCTTTGAGAGATGTAGAGCAGAGAGG
CCGGCTTGTGTCGTTGATTATCCCAGCGGGATTGCGATTGCGGTTGGCTG
AAGATTGGTATGCCGTAACGAGGAAACGATATTTAACAGGGAACATTCCT
CGAGGACTGACTGGTTGCAGTGGTGATGCTGATGACGGAGAAAGAGGTGT
AAAGCAGCGACGAGAACTGCGCCAACTACCTAACGTGAAGGAGGTAATTT
GGGGATACGAGAAAACTCTCCCTTCATCCTCACCTGTATCTTTGTCCTCG
TCTGATGCGAAGGGATCAAATGGACCTATGGGCGAACGCCTTTGCACCTT
GTTTGATGGGGCGCTAGGCAATTTGCTTCTGTATCGATTTGAAATGAATC
AGTATCTGGCCCTATTGGAAGGATTAAAAGAATCGAAAAGACCTCCCCAC
CAAGTGTGGGGTGCTGAGCACCTTCTCCGTTTGCTTGCTATAACCCCCCG
TCTTTTGGCATCTGAGAGCAGAGGTGGCAGCAAAATCAGCACGGACGATG
ATAAGGATTTGGAGGGAGAGTTTTCAAAGGAGGACGGGGAGAGTGCCTCG
ATAGTTGAGCAGGCGGAGGAAGCACGATTCTATATACAGGGGCTACTGAA
TCATTTGGCGGAGCACCAGGACACACTATTTGCGCCCTATGAAGAGCAAC
CTCGTGCCTTTGGGCTCGATGTGGCGCATAGCATTTGA
back to top

protein sequence of NO11G00880.1

>NO11G00880.1-protein ID=NO11G00880.1-protein|Name=NO11G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=794bp
MANAGRQAGSFVSAPLQNGLALLMLPENNVSFPGGRGLLDECTLSHVPRS
LVITTVADFSPATLWQPLANSILQSSKTHNSCIAHSSQLVMQDDTAMARP
ANRTRSKQAGFTALSPAHQQHTITAQEEEKSPQSIVEKSSEAAGHAIAST
INNKKHCREEISGVEAAPGLRRRTTRGGGSSSAPTASSSSGNGPLTIKQE
GQKSYNSREGVQVEVPVVPIVKEERPGRAAAAFAKLTSRSSSTSIANTGD
AGGGNNSAGGQSSATYDINAKKSTYKKSHYVSEAPKRLELVADRHSKGTL
LNATIRIKNPDVRTKAFGWSHRGDNFFALALMSVKGERILPELYKDVPLR
YRIAALASKLDSKGEEINTEEVLYDEAGQSTVGGLFYFRVPQFKTPGRYS
ISFRFSREAPSAFRKIDPVSQIVLVVPIDGSASSSSTSNSSNNNNENNVK
NNNNDNNNNREKKSNTNQEEAGPQTFGLGDLTDSTEKARSLRSQERNLGG
SSMAFSAALLGEGGGSRDCFSVDCAAGTGGNAGSKRQQSLEGRFASHVMQ
SPVFGLSLRDVEQRGRLVSLIIPAGLRLRLAEDWYAVTRKRYLTGNIPRG
LTGCSGDADDGERGVKQRRELRQLPNVKEVIWGYEKTLPSSSPVSLSSSD
AKGSNGPMGERLCTLFDGALGNLLLYRFEMNQYLALLEGLKESKRPPHQV
WGAEHLLRLLAITPRLLASESRGGSKISTDDDKDLEGEFSKEDGESASIV
EQAEEARFYIQGLLNHLAEHQDTLFAPYEEQPRAFGLDVAHSI*
back to top

mRNA from alignment at chr11:345201..349745+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO11G00880.1 ID=NO11G00880.1|Name=NO11G00880.1|organism=Nannochloropsis oceanica|type=mRNA|length=4545bp|location=Sequence derived from alignment at chr11:345201..349745+ (Nannochloropsis oceanica)
CGAGGATGAGCTGCCGGGAAGGGCACAGGGTGATCTTCATCTTCCCGGAT ACGATTGTGGCTTATGAGATAGGAAGAAGACGGTGTTAGCGCTTCAACCT CCAGCTTGATTTATTGCGTGTATTGGTGTATTGTGTGGTATTTCCATGTA GCCATCGAAAAAGAATTCAAAATGCGCATATTTCCTTACGCTGGGACCAA GCTGAGGGTATATATATGCCTGTATGCCCCTGGCCCCTCGAATGCGGACT TCTGTTCACATACAACATATGAACTCGTAATATGTCTCTGGCGCGCGTGT ACCCCCCCGCTAGAGGGCGCTAGCAGCAAGAAACTAACAAGCCAACGCCA AGAAAAGCCCACTCGAATTTGTTTCGTGGCCTATGAGACAGCCTGTGCTA TCTAGTAGTCACCACCGTGTGCAACCTCTGATGTTGTCTTCATACAGATT GAGAGTGAATTCCCAGGGCACCTCACTCCTCCCGAAGAAAAGGAAATAGT TTCAACAAGGACATCGTGTATTTTCCGTCTTTGTTGTGCGCCCTCCTCCC TCAGAAATTCTCGCAGATTTAGGAATTAAGGCCAAGATAGAGAAGAGGAA AAGATTCAGGGGAGGAGGGAGAAAGGAAAAAGGGTATGGCGCAAGAGGGT AAGATCGCTCGAGGAACGAGGAAAGACAGATGCTGGGATGTATACTGAGT GGACTTTGTCACGGGCTGAGGAATCTTCGACCCCAAAGTATGGAGAGAAA TTGGATTTGATCAGGCGAGGAGAATGGGTAGGAAGTCGAACGGAAAGTGC GTGCTTTTTTAGAGGCCAAAGAAGGACAATCCAAATTTGCCGGGTGAAGC GTTGTATTCCCATTATGCCTCCCCTCTTAAACATCCCCCGTTAAGGAAAG GAGACGAAATATCGTCCGATTAAATAGCTTTGTCACTGTCTTCCTCCAAC ACTTGATTATCAACAATCGTCTCTACTCTCTTCTACTGGCTTCTTCATTT ATCTAACCTTTTATGTGGCCTGTAAACGTTCTGCTGTTCCCCCCTCTTAT GCTATCCCCTTACGACTGCCATCAAATTAACCATATTTCGTTTACCCGTT TGCTCAACCAAGAAGCGCATGGGTGGGGCATGGGCATCTACCCAGCAATC CAAAGCTTTGTGGACCTCCTCCTCGCACCTCGCCAGTCCTTTCACAGATA GATAAATGACAGCAACGTCTGCCTTGTCTCGTGGTGACGGTGCGGATGCA AGCAAAGTATTGAAACGTGCCAATAATGTATTCAACTGAGCTTGCGGAGT GATAATGCCGTCATCAGGTCCGCTTGCGAGTGAGACGAAGGAGATGCTCC CACCTCCGAGCATCACACGCGTACTGAATTTGGCCCCTGGCTCTGTGACG TGGCCAATAGTCGTGAGGGGCACGGCTAGTGCTGTAGCTCCACCAAAGGT CTGATGCCCATCATTAGACGTTGAACTCGTCGATCGCCTCACATTTTCCG CTTGGCGCGTGGCCTCAACAATTTCGTCTTTTGTGAACCCCTTCCCGATC AAAAAGGCCATTCTGGTATCGTCCGAGGACTGCTGAACTCGTTCCAGGGC CAGGAAAGCTACCGCGCGACTCAGGTCTTTAGTGCTTCGTTTGGGAGAGG CGCTGCTCATTGTAAACCTGCGTACATGTAGGGGGAGGTTCGGGATGCGT AAATCTCGACATGAAAATATACCACCACCATCGAGCAAGAATAAAGCAAT GGATTTTCTGGTGTGCATAGATATTGGGTCGAAAAATACCTAGCATATCT CACACAAGCCGATTGAAGTGTTGCGACCTTCGCCGCCACCCTCGCTCTTC AGGAAGCCCGCTATAGGATGGTATGGTAAGGCCTCGGAGGCAGTCAGAAT ACAGGACGGCGAGGCTAAGTGTTTGAAGAGGTGGGATGAGATTCCTCAGG CGCCTGTAAGAGGCTTTGAGGCGCTTGTAAGGCATTGGTCTACCAAAATG TCTCCGTAAACTTGAGTTTTTGCCGAGGGCTTGATCCCCAGCAGAAAGAC TTAGAGATGGCAAATGCTGGCAGACAGGCAGGCTCTTTTGTTTCCGCCCC GTTGCAGAACGGGCTGGCGTTACTAATGTTGCCTGAAAATAACGTGAGTT TTCCAGGAGGGCGTGGGTTACTTGACGAATGCACACTTTCTCATGTGCCT CGCTCTCTCGTCATCACGACGGTCGCCGATTTTTCTCCCGCCACACTGTG GCAGCCACTAGCAAACTCAATCCTGCAATCTTCCAAGACTCACAACTCAT GCATAGCACACTCGTCGCAGCTAGTGATGCAAGATGATACGGCCATGGCA CGGCCAGCAAATAGGACGCGAAGCAAACAGGCTGGTTTCACGGCCCTGTC GCCAGCCCACCAACAACACACCATCACCGCGCAAGAAGAGGAGAAGTCGC CGCAAAGTATTGTAGAAAAGAGTAGCGAGGCCGCTGGGCATGCGATTGCC TCAACCATCAACAATAAAAAACATTGTAGGGAGGAGATAAGCGGAGTAGA GGCTGCGCCAGGACTGCGCCGGCGTACTACGCGGGGGGGGGGCAGCAGCA GCGCCCCCACGGCAAGCAGTAGCAGTGGCAACGGCCCTTTGACCATCAAA CAGGAGGGACAAAAATCATATAACTCACGAGAAGGAGTACAAGTTGAAGT ACCGGTAGTGCCGATCGTGAAGGAAGAGAGGCCTGGCCGGGCAGCGGCAG CGTTTGCAAAACTGACCTCCCGCAGCAGCAGTACCAGCATCGCAAATACG GGAGATGCCGGCGGTGGCAATAATTCGGCAGGCGGCCAATCTAGTGCCAC TTATGACATAAATGCCAAAAAAAGTACATACAAAAAAAGTCACTATGTGT CGGAGGCACCCAAGCGTCTCGAACTTGTGGCGGATCGACATTCAAAGGGC ACCTTGCTCAACGCGACCATTCGGATCAAAAACCCCGACGTGCGAACGAA GGCTTTTGGGTGGTCTCACCGTGGGGACAATTTTTTTGCTTTGGCCCTCA TGAGCGTCAAGGGCGAAAGGATCCTGCCCGAGCTTTATAAAGACGTGCCG CTTCGCTATCGCATTGCTGCCCTCGCGAGTAAACTGGACAGTAAGGGAGA GGAGATCAACACGGAAGAGGTATTTGTTTTACAATTCCACAGCCACCATT ACCACAATCTATTAGACTCACGGAATTATCCCCACCCCCTTCTCGCTCTT TCCCTTTCTTCCTCATTCCGTTGTAGGTGCTGTACGACGAGGCAGGCCAG TCTACTGTCGGCGGACTTTTCTACTTCCGAGTCCCGCAGTTCAAGACTCC CGGCCGTTATTCCATCTCATTCCGGTTTTCAAGAGAGGCTCCATCCGCCT TTCGCAAGATTGATCCCGTCTCACAGATCGTGTTGGTGGTGCCGATTGAC GGGTCTGCTAGCAGCAGCAGCACAAGCAACAGCAGCAACAACAACAATGA AAACAACGTCAAAAACAACAACAACGACAACAACAACAACAGGGAGAAAA AATCCAACACCAATCAAGAGGAAGCAGGTCCACAGACCTTTGGTCTGGGA GACCTGACGGATTCTACAGAAAAAGCACGGAGTCTACGTAGTCAAGAAAG GAATCTCGGTGGCAGCAGCATGGCCTTCTCTGCAGCGTTACTAGGTGAGG GAGGAGGATCCAGAGATTGTTTCTCGGTCGATTGTGCTGCAGGAACTGGA GGGAACGCAGGCAGTAAACGACAGCAGAGTCTTGAGGGGAGATTTGCATC GCATGTGATGCAGAGCCCGGTGTTCGGGCTGTCTTTGAGAGATGTAGAGC AGAGAGGCCGGCTTGTGTCGTTGATTATCCCAGCGGGATTGCGATTGCGG TTGGCTGAAGATTGGTATGCCGTAACGAGGAAACGATATTTAACAGGGAA CATTCCTCGAGGACTGACTGGTTGCAGTGGTGATGCTGATGACGGAGAAA GAGGTGTAAAGCAGCGACGAGAACTGCGCCAACTACCTAACGTGAAGGAG GTAATTTGGGGATACGAGAAAACTCTCCCTTCATCCTCACCTGTATCTTT GTCCTCGTCTGATGCGAAGGGATCAAATGGACCTATGGGCGAACGCCTTT GCACCTTGTTTGATGGGGCGCTAGGCAATTTGCTTCTGTATCGATTTGAA ATGAATCAGTATCTGGCCCTATTGGAAGGATTAAAAGAATCGAAAAGACC TCCCCACCAAGTGTGGGGTGCTGAGCACCTTCTCCGTTTGCTTGCTATAA CCCCCCGTCTTTTGGCATCTGAGAGCAGAGGTGGCAGCAAAATCAGCACG GACGATGATAAGGATTTGGAGGGAGAGTTTTCAAAGGAGGACGGGGAGAG TGCCTCGATAGTTGAGCAGGCGGAGGAAGCACGATTCTATATACAGGGGC TACTGAATCATTTGGCGGAGCACCAGGACACACTATTTGCGCCCTATGAA GAGCAACCTCGTGCCTTTGGGCTCGATGTGGCGCATAGCATTTGA
back to top

Coding sequence (CDS) from alignment at chr11:345201..349745+

>NO11G00880.1 ID=NO11G00880.1|Name=NO11G00880.1|organism=Nannochloropsis oceanica|type=CDS|length=2382bp|location=Sequence derived from alignment at chr11:345201..349745+ (Nannochloropsis oceanica)
ATGGCAAATGCTGGCAGACAGGCAGGCTCTTTTGTTTCCGCCCCGTTGCA
GAACGGGCTGGCGTTACTAATGTTGCCTGAAAATAACGTGAGTTTTCCAG
GAGGGCGTGGGTTACTTGACGAATGCACACTTTCTCATGTGCCTCGCTCT
CTCGTCATCACGACGGTCGCCGATTTTTCTCCCGCCACACTGTGGCAGCC
ACTAGCAAACTCAATCCTGCAATCTTCCAAGACTCACAACTCATGCATAG
CACACTCGTCGCAGCTAGTGATGCAAGATGATACGGCCATGGCACGGCCA
GCAAATAGGACGCGAAGCAAACAGGCTGGTTTCACGGCCCTGTCGCCAGC
CCACCAACAACACACCATCACCGCGCAAGAAGAGGAGAAGTCGCCGCAAA
GTATTGTAGAAAAGAGTAGCGAGGCCGCTGGGCATGCGATTGCCTCAACC
ATCAACAATAAAAAACATTGTAGGGAGGAGATAAGCGGAGTAGAGGCTGC
GCCAGGACTGCGCCGGCGTACTACGCGGGGGGGGGGCAGCAGCAGCGCCC
CCACGGCAAGCAGTAGCAGTGGCAACGGCCCTTTGACCATCAAACAGGAG
GGACAAAAATCATATAACTCACGAGAAGGAGTACAAGTTGAAGTACCGGT
AGTGCCGATCGTGAAGGAAGAGAGGCCTGGCCGGGCAGCGGCAGCGTTTG
CAAAACTGACCTCCCGCAGCAGCAGTACCAGCATCGCAAATACGGGAGAT
GCCGGCGGTGGCAATAATTCGGCAGGCGGCCAATCTAGTGCCACTTATGA
CATAAATGCCAAAAAAAGTACATACAAAAAAAGTCACTATGTGTCGGAGG
CACCCAAGCGTCTCGAACTTGTGGCGGATCGACATTCAAAGGGCACCTTG
CTCAACGCGACCATTCGGATCAAAAACCCCGACGTGCGAACGAAGGCTTT
TGGGTGGTCTCACCGTGGGGACAATTTTTTTGCTTTGGCCCTCATGAGCG
TCAAGGGCGAAAGGATCCTGCCCGAGCTTTATAAAGACGTGCCGCTTCGC
TATCGCATTGCTGCCCTCGCGAGTAAACTGGACAGTAAGGGAGAGGAGAT
CAACACGGAAGAGGTGCTGTACGACGAGGCAGGCCAGTCTACTGTCGGCG
GACTTTTCTACTTCCGAGTCCCGCAGTTCAAGACTCCCGGCCGTTATTCC
ATCTCATTCCGGTTTTCAAGAGAGGCTCCATCCGCCTTTCGCAAGATTGA
TCCCGTCTCACAGATCGTGTTGGTGGTGCCGATTGACGGGTCTGCTAGCA
GCAGCAGCACAAGCAACAGCAGCAACAACAACAATGAAAACAACGTCAAA
AACAACAACAACGACAACAACAACAACAGGGAGAAAAAATCCAACACCAA
TCAAGAGGAAGCAGGTCCACAGACCTTTGGTCTGGGAGACCTGACGGATT
CTACAGAAAAAGCACGGAGTCTACGTAGTCAAGAAAGGAATCTCGGTGGC
AGCAGCATGGCCTTCTCTGCAGCGTTACTAGGTGAGGGAGGAGGATCCAG
AGATTGTTTCTCGGTCGATTGTGCTGCAGGAACTGGAGGGAACGCAGGCA
GTAAACGACAGCAGAGTCTTGAGGGGAGATTTGCATCGCATGTGATGCAG
AGCCCGGTGTTCGGGCTGTCTTTGAGAGATGTAGAGCAGAGAGGCCGGCT
TGTGTCGTTGATTATCCCAGCGGGATTGCGATTGCGGTTGGCTGAAGATT
GGTATGCCGTAACGAGGAAACGATATTTAACAGGGAACATTCCTCGAGGA
CTGACTGGTTGCAGTGGTGATGCTGATGACGGAGAAAGAGGTGTAAAGCA
GCGACGAGAACTGCGCCAACTACCTAACGTGAAGGAGGTAATTTGGGGAT
ACGAGAAAACTCTCCCTTCATCCTCACCTGTATCTTTGTCCTCGTCTGAT
GCGAAGGGATCAAATGGACCTATGGGCGAACGCCTTTGCACCTTGTTTGA
TGGGGCGCTAGGCAATTTGCTTCTGTATCGATTTGAAATGAATCAGTATC
TGGCCCTATTGGAAGGATTAAAAGAATCGAAAAGACCTCCCCACCAAGTG
TGGGGTGCTGAGCACCTTCTCCGTTTGCTTGCTATAACCCCCCGTCTTTT
GGCATCTGAGAGCAGAGGTGGCAGCAAAATCAGCACGGACGATGATAAGG
ATTTGGAGGGAGAGTTTTCAAAGGAGGACGGGGAGAGTGCCTCGATAGTT
GAGCAGGCGGAGGAAGCACGATTCTATATACAGGGGCTACTGAATCATTT
GGCGGAGCACCAGGACACACTATTTGCGCCCTATGAAGAGCAACCTCGTG
CCTTTGGGCTCGATGTGGCGCATAGCATTTGA
back to top
Synonyms
Publications