NO11G00440.2, NO11G00440.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G00440.2
Unique Name	NO11G00440.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3945
Alignment location	chr11:188268..193951 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:188268..193951 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO11G00440.2 vs.
Match: EWM25191.1 (c6 finger domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 139.4 bits (350), Expect = 5.400e-29
Identity = 130/353 (36.83%), Postives = 179/353 (50.71%), Query Frame = 0

Query:  557 AAATVPTKFEEEGGGGGRGGGGGGG---GGGGGNGGRLLSRVAAFLHSNTIDEQRARATLLSWHGWNRHHDDRDCTEDILAPLAALMGVSLPPSLPPSLPSSLPPAAKGPGKK---EEEEKGGKEGKVEAEKEKRGDLKKVLEAAVAVATAQKEENEKEEKEEGGRVGGREGGARKRWKVSPASLNAALASAAALQREGGMEAEGGKEGGKKEGVMPLLTKEELDVLSFLRVGKDLTTAGAACCSVAWCNGTPVERHVNERFHAMFMPRSTFLASSLLPFLLWAEFIAPEAREIFFDSLLALSLTKAAAAAVETKMYLPVLDRWGLKLPATVHLRVFLSGDGELSAAMLLIEP 904
            AA+  P   + E GGG R G G  G    GGG   G  LSR+AAFL  NT+   + RATL +WH W ++H  +D T+ +L  L+ LM VSLPPS PPS  +    A+ G G     EE  KGG    +  +K                           + E+GG  GG EG  RK  ++  A   A    +  +++E G    GGK GG +    P    +E  +L+FLRVGK ++  G ACC++ +     V   VNERF   FM R++  AS+L+P LLW + IA E+R+ + D  L L +   +    E +  L V DR G+ +PA V LR F+S +G + A ML IEP
Sbjct:  252 AASVTPRTQDPETGGGQRMGRGEEGVRKEGGGDQDGTFLSRIAAFLQQNTLQGTKPRATLHTWHHWGQYHG-QDGTKGLLPLLSVLMQVSLPPSRPPSTAARTFQASGGGGGLRGCEEVTKGGDSEGMVTQKTI-------------------------DWEKGGEEGGFEG--RKMREMMRARWLAI--KSQTIKQEKGEGGGGGKGGGNRTDASP---SDEERMLTFLRVGKGISHCGPACCTIGFHRDAGVSVDVNERFENRFMSRNSLQASTLIPPLLWQQCIASESRDAYVDIFLNL-VFGPSPVPTEVRSELLVQDRGGVIVPARVCLRYFVSDNGNMHAIMLAIEP 570

The following BLAST results are available for this feature:

BLAST of NO11G00440.2 vs.

BLAST of NO11G00440.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25191.1	5.400e-29	36.83	c6 finger domain-containing protein [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO11G00440	NO11G00440	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO11G00440.2	NO11G00440.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO11G00440.2.cds1	NO11G00440.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.2.cds2	NO11G00440.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.2.cds3	NO11G00440.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.2.cds4	NO11G00440.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.2.cds5	NO11G00440.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.2.cds6	NO11G00440.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.2.cds7	NO11G00440.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.2.cds8	NO11G00440.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.2.cds9	NO11G00440.2.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr11:188268..193951-
coding sequence from alignment at chr11:188268..193951-

mRNA sequence

>NO11G00440.2 ID=NO11G00440.2|Name=NO11G00440.2|organism=Nannochloropsis oceanica|type=mRNA|length=3945bp
CAACAGGCACCCGAAGACAGGCAAGATACAGCCACGAAGGGCATGTCCCT
ACCAAAACGGCGTGGAAGTGACGAGGGGCGTTGTAGCAAGTCGCAACCAA
GCAATGTCCGTGACGGTGACTTGGGCACGGATGAAAAGCGACGACGAAAG
GAAGCAGTCGTAACTGCAGCACCACCACCAGCAGCAGCACCACCACCACC
ATCACCACTAGGAGGAGAAGAGGTTGTAGCTGCAACACTCGCCTCCGGCT
TCGGTAGCGTTGTTGTAGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGCGGAATGTACGGGAGCTGTTATCCTTATAACGTGTCAATGTATTCGAA
CGTTGCTGGTGGCGGGGAGGGTAGAGGAGGAGTAGGAGATGAAGGAAGAG
GAGGAGGAGGAGGGAGGCTTGAAGGGAAAGGAGAGGGAGAAATGGGGCTA
GGAGGAAGGGTGCGGATGGAGAGGGGGGGGACGTGCGGAGAGTGCAAGCT
GAGTAAGGTAAAGTGCGACAGAGCCCAACCTGTCTGCGGTCGGTGCAAGC
GGCGGAATCTTGTATGCGTGCCCCAGATGCGAGGGCCAGGGCGGCCGGTG
GGATCCTATGCTAGATCCGCCCCTGGCAGTCGCGACCCCGACGATCTCAA
GCAGCAACAACAGCAGCAGATGTACCTCCAGGACCAGGAGTACTACCAAC
AGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GTACCATTACAACCATAATCACCATCACCAGCAGCAGCAGCAACACAACC
ACACAGGATCTTTGGAACGACCGTACCCGGACCAACCACCCCCCGGCCCC
TCCCTCTCGTCCTCCTTCGGCCCTCCCTTCTTCCCTCCCCCTCCTCCTCC
CTACGCGCGATCCACCTACCCTGGCAATTACCAACACTACCAACCACAGC
AACAGCAGCAACAACAGTACCATCAGTATCAACTGCAGCAACACCATTAT
CCGCAGCAGCAGTATCAGCAGCACCAGCAACAGCAACAGCAACAGCCGCA
GCAGCAGGCGATGTCTAACACCCCGGCATTTTCGGACTTTATCCATCCAG
TGGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGCGGCGGGGGGGG
GAAGCTCCTCCCCACCCCGAGAGCAACATAGATATGGAGACCCATATCCG
CGCCGCCTCTTCCCTCGAAAAGCTTGCCCGCGGACATCTCCCTCCCTCCC
TCCCTCACTCCCTTCCTCATTCCAATCCCAACACCACTATCGCCACCTTC
TCCTCCTCTTTCTCCGTCTCCTCCTCCACCAATCCTGCCCTCACCAACGG
CAGCACCAACGGCAGCAGCAACGGTCTCAGCAACGGTTTCAGCAACGGTT
TCAGCCACCTTCCACCTCCCACCCGCGACAACAACAGCAGCAGCAGGTCT
TCCTTCTTCCCCTCTTCCTTTCCCCCTCCCTCCTCCCCTCCCTCCTCCCC
TCCCCCCTTTCAAGCGACCTACAGCCAGCATAATGCTCCTCCGCCACCTC
CTCCTCTTCCTCCTTCTTCTTCCCTTCCTTCGATTCCCTCCCCTCCTCCC
TCTTCCTCCTCCTCCCACCAACTCGCCACAGCAGCAACAACAGCAACAGC
AGCCGCAACAGCAGCCGCAACGGTGCCAACAAAGTTTGAAGAGGAAGGAG
GAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGG
AACGGAGGAAGGCTCTTGTCACGTGTGGCGGCATTCCTACACTCCAACAC
TATCGACGAGCAAAGGGCCCGTGCTACCTTGCTCTCCTGGCATGGTTGGA
ATAGGCATCATGATGACCGTGATTGCACGGAGGATATACTTGCCCCTCTC
GCAGCCCTGATGGGTGTCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCC
TTCCTCCCTCCCTCCTGCTGCGAAGGGCCCCGGGAAAAAGGAGGAGGAGG
AGAAGGGAGGGAAAGAGGGGAAGGTGGAGGCGGAGAAGGAGAAGAGGGGG
GATTTGAAAAAGGTGCTTGAAGCAGCAGTAGCAGTAGCAACAGCACAGAA
AGAGGAAAATGAGAAGGAGGAGAAGGAGGAGGGAGGAAGGGTGGGAGGGA
GGGAAGGAGGGGCGAGGAAACGTTGGAAGGTCTCTCCAGCCTCTCTGAAT
GCCGCCTTGGCGTCTGCTGCCGCCCTACAGAGGGAGGGAGGGATGGAGGC
GGAGGGAGGGAAGGAGGGAGGGAAGAAGGAGGGGGTCATGCCCCTTCTGA
CGAAGGAGGAGTTGGACGTGCTTTCTTTTTTGCGCGTGGGAAAGGATTTG
ACGACTGCAGGCGCTGCCTGCTGTTCTGTCGCCTGGTGCAACGGAACGCC
CGTTGAGCGACACGTTAACGAACGTTTCCACGCCATGTTCATGCCCAGAT
CGACCTTCCTGGCCTCCTCCCTCCTCCCCTTCCTCCTCTGGGCCGAGTTC
ATCGCACCGGAGGCACGAGAAATATTCTTTGACTCACTCCTGGCCTTGTC
CTTGACGAAGGCGGCAGCGGCGGCGGTGGAAACCAAGATGTATCTACCGG
TCCTCGACAGGTGGGGATTAAAGCTACCGGCTACGGTGCATCTACGTGTC
TTTTTGTCCGGTGATGGCGAGTTAAGTGCCGCCATGCTCTTGATCGAGCC
CCGCTCCTACGGGTAGTGAAGGTGAAATGGATTCAAAGGGGTGTGCTGCA
TGTACCTTTTACATGTTTCAGGCCTTCAAAGCGAACTTCAAAGCGAAGCG
TTTCAAACCGTTTCAAATTGATTCCAACCGTTTGATTCATTCGCACCGGA
CTCCTTCGATCGAGGGAATGATTCAACAAACTATTTGAGGAGTTTAGGCC
CTTAAATAGCGAAGTCGAGCTGTCTAGGGGTAGGGCAGCGTCTCAAGTGC
TACAAGTAGGAGTTAAGGGCTCCTCCTTCCCAGGCTCTTACAAAGCAACA
CTGCCTTAAATAGGGGAAATGACCATTTTGGTAGTACAAGCTTCCTTTAC
ATGCCTGCCTCGCCACCGATCACATAAGAACAAAACATATGGACCGTATG
TGGTCTTGTGGCTGTGTGAGGACACAAAATTGACGAAAGTAGTTACACAG
AAAGCATTATCCGCCTTGTTCACATTACCCCGTTCATGTCCTTGCGCCCA
CGGGGGCCACTAGGCAGGCACCCCAAAAAATAATGCTGCTGTCGGTACAT
GTGGATGGCAAGAAGCACATGTACACATGTTGACAATGGACTCCTGGGTC
GCGTTAATGGTGTGTGTTTTGCTATTTGAGGGCTCCTTTCGCTATTTGAG
GATGCCTTTGCTATTTGATGGTTATCCTCCCGGTCGAATACACTCCTGGG
CCAGATCTTAAATAGAAATCTTAGGTAAATATGTAAGGGTAGCTGCTGGT
TACGGTTGCGGAGTTGAGCAGCCCCTTTAATTAACAATAAATATATAGAG
AATTAAACCATTAATGGATCATCCATTTTTTGGGAAAGTCAATAATAAAT
AAATAGGAGGTCAATAACAATTGCCTTCCAAATATTACCATGTATGCGAG
AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGGA
GAGAGAGAGGAGAGAGAGGGATGAAATGAGAGAGACGGCCTTTCCTGGCC
ACGAATATGAAGGTCACAAAGAAGTAGAAGACGAAGAGTGGAGAGAGAAA
AGAAATGGAGAGATTAATTGTTGGAGGAGGAGGAGGAGGAGAAACGTGGG
GACGGTTTCTCGGAGATTGGGAAATTGGACGAAAATTCGATATTTGAAGG
GACAAATCGATACCCGGAGAAATCACCAATTATAGTCTCCACGAG

protein sequence of NO11G00440.2

>NO11G00440.2-protein ID=NO11G00440.2-protein|Name=NO11G00440.2|organism=Nannochloropsis oceanica|type=polypeptide|length=908bp
MSLPKRRGSDEGRCSKSQPSNVRDGDLGTDEKRRRKEAVVTAAPPPAAAP
PPPSPLGGEEVVAATLASGFGSVVVGGGGGGGGGGGGGMYGSCYPYNVSM
YSNVAGGGEGRGGVGDEGRGGGGGRLEGKGEGEMGLGGRVRMERGGTCGE
CKLSKVKCDRAQPVCGRCKRRNLVCVPQMRGPGRPVGSYARSAPGSRDPD
DLKQQQQQQMYLQDQEYYQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQYHYNHNHHHQQQQQHNHTGSLERPYPDQPPPGPSLSSSFGPPFFPPP
PPPYARSTYPGNYQHYQPQQQQQQQYHQYQLQQHHYPQQQYQQHQQQQQQ
QPQQQAMSNTPAFSDFIHPVERGGGGGGGGGGRRGGEAPPHPESNIDMET
HIRAASSLEKLARGHLPPSLPHSLPHSNPNTTIATFSSSFSVSSSTNPAL
TNGSTNGSSNGLSNGFSNGFSHLPPPTRDNNSSSRSSFFPSSFPPPSSPP
SSPPPFQATYSQHNAPPPPPPLPPSSSLPSIPSPPPSSSSSHQLATAATT
ATAAATAAATVPTKFEEEGGGGGRGGGGGGGGGGGGNGGRLLSRVAAFLH
SNTIDEQRARATLLSWHGWNRHHDDRDCTEDILAPLAALMGVSLPPSLPP
SLPSSLPPAAKGPGKKEEEEKGGKEGKVEAEKEKRGDLKKVLEAAVAVAT
AQKEENEKEEKEEGGRVGGREGGARKRWKVSPASLNAALASAAALQREGG
MEAEGGKEGGKKEGVMPLLTKEELDVLSFLRVGKDLTTAGAACCSVAWCN
GTPVERHVNERFHAMFMPRSTFLASSLLPFLLWAEFIAPEAREIFFDSLL
ALSLTKAAAAAVETKMYLPVLDRWGLKLPATVHLRVFLSGDGELSAAMLL
IEPRSYG*

mRNA from alignment at chr11:188268..193951-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO11G00440.2 ID=NO11G00440.2|Name=NO11G00440.2|organism=Nannochloropsis oceanica|type=mRNA|length=5684bp|location=Sequence derived from alignment at chr11:188268..193951- (Nannochloropsis oceanica)
CAACAGGCACCCGAAGACAGGCAAGATACAGCCACGAAGGGCATGTCCCT
ACCAAAACGGCGTGGAAGTGACGAGGGGCGTTGTAGCAAGTCGCAACCAA
GCAATGTCCGTGACGGTGACTTGGGCACGGATGAAAAGCGACGACGAAAG
GAAGCAGTCGTAACTGCAGCACCACCACCAGCAGCAGCACCACCACCACC
ATCACCACTAGGAGGAGAAGAGGTTGTAGCTGCAACACTCGCCTCCGGCT
TCGGTAGCGTTGTTGTAGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGCGGAATGTACGGGAGCTGTTATCCTTATAACGTGTCAATGTATTCGAA
CGTTGCTGGTGGCGGGGAGGGTAGAGGAGGAGTAGGAGATGAAGGAAGAG
GAGGAGGAGGAGGGAGGCTTGAAGGGAAAGGAGAGGGAGAAATGGGGCTA
GGAGGAAGGGTGCGGATGGAGAGGGGGGGGACGTGCGGAGAGTGCAAGCT
GAGTAAGGTATGTATGTATTCGTATACTTATGGGTGTATTCATTTGATAT
TCGATGTGAGGGAGGGAGGAAGGAAGTGGCGAAGGAGGGATAGATTGTCC
TGTGGAGAGGGACGAGGAAGCAAAGGAGGAGGAGGAGGACGAGGAAGAGG
AGGAGGAGGAGGGAAGTACGGCAGGAAGGAGGGAAGAGGTTGGCGGAGAT
TTTAAGCTGACTTCACGTTCAGGAGTATGTTCCGCTATTCCCTTTCTCCT
CGTTGACTTACACCTTCCCTACTTTCCTCCTTTCCTCGCCTCTCTCCCTC
CCCTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCTCTCCCTTCCTTCCCCT
TCCTCCCTCCCCCTGGTGCAGGTAAAGTGCGACAGAGCCCAACCTGTCTG
CGGTCGGTGCAAGCGGCGGAATCTTGTATGCGTGCCCCAGATGCGAGGGC
CAGGGCGGCCGGTGGGATCCTATGCTAGATCCGCCCCTGGCAGGTGAGGG
AGGGAGGGAGGGGGGGGGGGGAGAGGGAGGGAGGGAGGGAGGGAGGAAAG
GAGGGGGAGAGATTTATCCGTAATAAATGGTGTTTCTTGGAAGTGTTAGA
AAGGCACTCAGAAGGGGAAGAGAAGGAGAGGCAGGAACATGAGACATTCT
GACTACAGCGGTATATATTTACACAATCCATTCCTCCCTCCTTTCCTCCC
TCCTTTCCTCCCCCCCTCCCCCCTCCCTCCCTCCCCCCTTCCCTCCTTGC
CACCCTAGTCGCGACCCCGACGATCTCAAGCAGCAACAACAGCAGCAGAT
GTACCTCCAGGACCAGGAGTACTACCAACAGCAGCAGCAGCAGCAGCAGC
AACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCATTACAACCATAATCA
CCATCACCAGCAGCAGCAGCAACACAACCACACAGGATCTTTGGAACGAC
CGTACCCGGACCAACCACCCCCCGGCCCCTCCCTCTCGTCCTCCTTCGGC
CCTCCCTTCTTCCCTCCCCCTCCTCCTCCCTACGCGCGATCCACCTACCC
TGGCAATTACCAACACTACCAACCACAGCAACAGCAGCAACAACAGTACC
ATCAGTATCAACTGCAGCAACACCATTATCCGCAGCAGCAGTATCAGCAG
CACCAGCAACAGCAACAGCAACAGCCGCAGCAGCAGGCGATGTCTGTCGC
TGCCTCCCCTTTCCTACCCCCCCCCCCCCTCCTCTCTGTCCTCCCTCCCT
TCCTCCTCCCTCTTCAAGAACACCCCGGCATTTTCGGACTTTATCCATCC
AGTGGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGCGGCGGGGGG
GGGAAGCTCCTCCCCACCCCGAGAGCAACATAGATGTACGTCCCTCCTTC
CCTCCCTCCCTCCTTCCCTCCCTCCCTTTCTCCCTTCTTCCAATCCCAAG
CCCACCTCATCACCCTCTGTACCATTCCCACCTTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCTTCCTTTCTCAGATGGAGACCCATATCCGCGCCGCCT
CTTCCCTCGAAAAGCTTGCCCGCGGACATCTCCCTCCCTCCCTCCCTCAC
TCCCTTCCTCATTCCAATCCCAACACCACTATCGCCACCTTCTCCTCCTC
TTTCTCCGTCTCCTCCTCCACCAATCCTGCCCTCACCAACGGCAGCACCA
ACGGCAGCAGCAACGGTCTCAGCAACGGTTTCAGCAACGGTTTCAGCCAC
CTTCCACCTCCCACCCGCGACAACAACAGCAGCAGCAGGTCTTCCTTCTT
CCCCTCTTCCTTTCCCCCTCCCTCCTCCCCTCCCTCCTCCCCTCCCCCCT
TTCAAGCGACCTACAGCCAGCATAATGCTCCTCCGCCACCTCCTCCTCTT
CCTCCTTCTTCTTCCCTTCCTTCGATTCCCTCCCCTCCTCCCTCTTCCTC
CTCCTCCCACCAACTCGCCACAGCAGCAACAACAGCAACAGCAGCCGCAA
CAGCAGCCGCAACGGTGCCAACAAAGTTTGAAGAGGAAGGAGGAGGAGGA
GGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAACGGAGG
AAGGCTCTTGTCACGTGTGGCGGCATTCCTACACTCCAACACTATCGACG
AGCAAAGGGCCCGTGCTACCTTGTAAGCCCCCCCCCCCCCTCCCTCCCTC
CCTCTCTCCCCCCCTCCCTCCTTCTCTCCCGCCCTCCCTCTTTCCTGCCT
GTTCCCTCCACCTCCCCTGCTCCATCTTGTGTGTGGTGCACCATTTCCCT
CATCATTCTCCCTTCCCGCCCTCCCTATCTTTATCCCTCCCTCCCCCTCC
AGGCTCTCCTGGCATGGTTGGAATAGGCATCATGATGACCGTGATTGCAC
GGAGGATATACTTGCCCCTCTCGCAGCCCTGATGGGTGTCTCCCTCCCTC
CTTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCTGCTGCGAAGGGC
CCCGGGAAAAAGGAGGAGGAGGAGAAGGGAGGGAAAGAGGGGAAGGTGGA
GGCGGAGAAGGAGAAGAGGGGGGATTTGAAAAAGGTGCTTGAAGCAGCAG
TAGCAGTAGCAACAGCACAGAAAGAGGAAAATGAGAAGGAGGAGAAGGAG
GAGGGAGGAAGGGTGGGAGGGAGGGAAGGAGGGGCGAGGAAACGTTGGAA
GGTCTCTCCAGCCTCTCTGAATGCCGCCTTGGCGTCTGCTGCCGCCCTAC
AGAGGGAGGGAGGGATGGAGGCGGAGGGAGGGAAGGAGGGAGGGAAGAAG
GAGGGGGTCATGCCCCTTCTGACGAAGGAGGAGTTGGACGTGCTTTCTTT
TTTGCGCGTGGGAAAGGTACGTGTACTCCCTCCCTCCTTCCCTCCCTCCC
TCCTTCCCTCCCTCCCCCCTCCCTCCCTCCCTCCTTCCTCCCGTCCACCT
TTCACTTGTCCTTGCCATCCTTCACTCCTTGCCTCCCTCTTCCCCCCTCT
ATCCTCTCCCTCTCATCTCTTACCACCCTTTCCTCCTGCTCTCCCTTCCA
AGGATTTGACGACTGCAGGCGCTGCCTGCTGTTCTGTCGCCTGGTGCAAC
GGAACGCCCGTTGAGCGACACGTTAACGAACGTTTCCACGCCATGTTCAT
GCCCAGGTAGGTAGGGAGGGAGGGAGGGACGGAAGGCAGTCACGTAAAGT
GATTAGAGTAGAAGCGTTTCACCGTGCTCATGCCAAGGTCGAAAGGGAGG
GAAGGAAGGAGGGAGGGAGGGAGGGAGAGAAGGAGGGACGGAGGGAGGGG
GGTCGCCTTCTGTCCTACACTGCTTCCAAGTCCTCCCTTCCTCGCCCCTT
CCCTCCCTCTCCCTCTGCCCCTCCCTCTCCTCCCCGGTGAGCCGAGTGCA
TGGCACCCACAACCCACACCCCTCTTTCCCTCCCTCCCTCCCTCCCCTCC
CCCCCTCAGATCGACCTTCCTGGCCTCCTCCCTCCTCCCCTTCCTCCTCT
GGGCCGAGTTCATCGCACCGGAGGCACGAGAAATATTCTTTGACTCACTC
CTGGCCTTGTCCTTGACGAAGGCGGCAGCGGCGGCGGTGGAAACCAAGAT
GTATCTACCGGTACGTGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GTAGGGAGGGAGGGAGGGAAGAAAGGATGACAACGGGAACTTCTTGCCAA
TTACCAACCTTCCCTCCCTCTCTCCCTCTTTCCCTCCCTCAGGTCCTCGA
CAGGTGGGGATTAAAGCTACCGGCTACGGTGCATCTACGTGTCTTTTTGT
CCGGTGATGGCGAGTTAAGTGCCGCCATGCTCTTGATCGAGCCCCGCTCC
TACGGGTAGTGAAGGTGAAATGGATTCAAAGGGGTGTGCTGCATGTACCT
TTTACATGTTTCAGGCCTTCAAAGCGAACTTCAAAGCGAAGCGTTTCAAA
CCGTTTCAAATTGATTCCAACCGTTTGATTCATTCGCACCGGACTCCTTC
GATCGAGGGAATGATTCAACAAGTGAGTCTATAAATCAATAAACCGTAAA
TTGATAAATTCACCTTAATTAAAATATAACAAGGGGTGTGTTTGACTCTC
CCAAAAATCCTTCACTAGACTATTTGAGGAGTTTAGGCCCTTAAATAGCG
AAGTCGAGCTGTCTAGGGGTAGGGCAGCGTCTCAAGTGCTACAAGTAGGA
GTTAAGGGCTCCTCCTTCCCAGGCTCTTACAAAGCAACACTGCCTTAAAT
AGGGGAAATGACCATTTTGGTAGTACAAGCTTCCTTTACATGCCTGCCTC
GCCACCGATCACATAAGAACAAAACATATGGACCGTATGTGGTCTTGTGG
CTGTGTGAGGACACAAAATTGACGAAAGTAGTTACACAGAAAGCATTATC
CGCCTTGTTCACATTACCCCGTTCATGTCCTTGCGCCCACGGGGGCCACT
AGGCAGGCACCCCAAAAAATAATGCTGCTGTCGGTACATGTGGATGGCAA
GAAGCACATGTACACATGTTGACAATGGACTCCTGGGTCGCGTTAATGGT
GTGTGTTTTGCTATTTGAGGGCTCCTTTCGCTATTTGAGGATGCCTTTGC
TATTTGATGGTTATCCTCCCGGTCGAATACACTCCTGGGCCAGATCTTAA
ATAGAAATCTTAGGTAAATATGTAAGGGTAGCTGCTGGTTACGGTTGCGG
AGTTGAGCAGCCCCTTTAATTAACAATAAATATATAGAGAATTAAACCAT
TAATGGATCATCCATTTTTTGGGAAAGTCAATAATAAATAAATAGGAGGT
CAATAACAATTGCCTTCCAAATATTACCATGTATGCGAGAGAAAGAAAGA
AAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGGA
GAGAGAGGGATGAAATGAGAGAGACGGCCTTTCCTGGCCACGAATATGAA
GGTCACAAAGAAGTAGAAGACGAAGAGTGGAGAGAGAAAAGAAATGGAGA
GATTAATTGTTGGAGGAGGAGGAGGAGGAGAAACGTGGGGACGGTTTCTC
GGAGATTGGGAAATTGGACGAAAATTCGATATTTGAAGGGACAAATCGAT
ACCCGGAGAAATCACCAATTATAGTCTCCACGAG

Coding sequence (CDS) from alignment at chr11:188268..193951-

>NO11G00440.2 ID=NO11G00440.2|Name=NO11G00440.2|organism=Nannochloropsis oceanica|type=CDS|length=2724bp|location=Sequence derived from alignment at chr11:188268..193951- (Nannochloropsis oceanica)
ATGTCCCTACCAAAACGGCGTGGAAGTGACGAGGGGCGTTGTAGCAAGTC
GCAACCAAGCAATGTCCGTGACGGTGACTTGGGCACGGATGAAAAGCGAC
GACGAAAGGAAGCAGTCGTAACTGCAGCACCACCACCAGCAGCAGCACCA
CCACCACCATCACCACTAGGAGGAGAAGAGGTTGTAGCTGCAACACTCGC
CTCCGGCTTCGGTAGCGTTGTTGTAGGCGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGCGGAATGTACGGGAGCTGTTATCCTTATAACGTGTCAATG
TATTCGAACGTTGCTGGTGGCGGGGAGGGTAGAGGAGGAGTAGGAGATGA
AGGAAGAGGAGGAGGAGGAGGGAGGCTTGAAGGGAAAGGAGAGGGAGAAA
TGGGGCTAGGAGGAAGGGTGCGGATGGAGAGGGGGGGGACGTGCGGAGAG
TGCAAGCTGAGTAAGGTAAAGTGCGACAGAGCCCAACCTGTCTGCGGTCG
GTGCAAGCGGCGGAATCTTGTATGCGTGCCCCAGATGCGAGGGCCAGGGC
GGCCGGTGGGATCCTATGCTAGATCCGCCCCTGGCAGTCGCGACCCCGAC
GATCTCAAGCAGCAACAACAGCAGCAGATGTACCTCCAGGACCAGGAGTA
CTACCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGTACCATTACAACCATAATCACCATCACCAGCAGCAGCAGCA
ACACAACCACACAGGATCTTTGGAACGACCGTACCCGGACCAACCACCCC
CCGGCCCCTCCCTCTCGTCCTCCTTCGGCCCTCCCTTCTTCCCTCCCCCT
CCTCCTCCCTACGCGCGATCCACCTACCCTGGCAATTACCAACACTACCA
ACCACAGCAACAGCAGCAACAACAGTACCATCAGTATCAACTGCAGCAAC
ACCATTATCCGCAGCAGCAGTATCAGCAGCACCAGCAACAGCAACAGCAA
CAGCCGCAGCAGCAGGCGATGTCTAACACCCCGGCATTTTCGGACTTTAT
CCATCCAGTGGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGCGGC
GGGGGGGGGAAGCTCCTCCCCACCCCGAGAGCAACATAGATATGGAGACC
CATATCCGCGCCGCCTCTTCCCTCGAAAAGCTTGCCCGCGGACATCTCCC
TCCCTCCCTCCCTCACTCCCTTCCTCATTCCAATCCCAACACCACTATCG
CCACCTTCTCCTCCTCTTTCTCCGTCTCCTCCTCCACCAATCCTGCCCTC
ACCAACGGCAGCACCAACGGCAGCAGCAACGGTCTCAGCAACGGTTTCAG
CAACGGTTTCAGCCACCTTCCACCTCCCACCCGCGACAACAACAGCAGCA
GCAGGTCTTCCTTCTTCCCCTCTTCCTTTCCCCCTCCCTCCTCCCCTCCC
TCCTCCCCTCCCCCCTTTCAAGCGACCTACAGCCAGCATAATGCTCCTCC
GCCACCTCCTCCTCTTCCTCCTTCTTCTTCCCTTCCTTCGATTCCCTCCC
CTCCTCCCTCTTCCTCCTCCTCCCACCAACTCGCCACAGCAGCAACAACA
GCAACAGCAGCCGCAACAGCAGCCGCAACGGTGCCAACAAAGTTTGAAGA
GGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGGAACGGAGGAAGGCTCTTGTCACGTGTGGCGGCATTCCTACAC
TCCAACACTATCGACGAGCAAAGGGCCCGTGCTACCTTGCTCTCCTGGCA
TGGTTGGAATAGGCATCATGATGACCGTGATTGCACGGAGGATATACTTG
CCCCTCTCGCAGCCCTGATGGGTGTCTCCCTCCCTCCTTCCCTCCCTCCC
TCCCTCCCTTCCTCCCTCCCTCCTGCTGCGAAGGGCCCCGGGAAAAAGGA
GGAGGAGGAGAAGGGAGGGAAAGAGGGGAAGGTGGAGGCGGAGAAGGAGA
AGAGGGGGGATTTGAAAAAGGTGCTTGAAGCAGCAGTAGCAGTAGCAACA
GCACAGAAAGAGGAAAATGAGAAGGAGGAGAAGGAGGAGGGAGGAAGGGT
GGGAGGGAGGGAAGGAGGGGCGAGGAAACGTTGGAAGGTCTCTCCAGCCT
CTCTGAATGCCGCCTTGGCGTCTGCTGCCGCCCTACAGAGGGAGGGAGGG
ATGGAGGCGGAGGGAGGGAAGGAGGGAGGGAAGAAGGAGGGGGTCATGCC
CCTTCTGACGAAGGAGGAGTTGGACGTGCTTTCTTTTTTGCGCGTGGGAA
AGGATTTGACGACTGCAGGCGCTGCCTGCTGTTCTGTCGCCTGGTGCAAC
GGAACGCCCGTTGAGCGACACGTTAACGAACGTTTCCACGCCATGTTCAT
GCCCAGATCGACCTTCCTGGCCTCCTCCCTCCTCCCCTTCCTCCTCTGGG
CCGAGTTCATCGCACCGGAGGCACGAGAAATATTCTTTGACTCACTCCTG
GCCTTGTCCTTGACGAAGGCGGCAGCGGCGGCGGTGGAAACCAAGATGTA
TCTACCGGTCCTCGACAGGTGGGGATTAAAGCTACCGGCTACGGTGCATC
TACGTGTCTTTTTGTCCGGTGATGGCGAGTTAAGTGCCGCCATGCTCTTG
ATCGAGCCCCGCTCCTACGGGTAG

Synonyms

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