NO11G00440.1, NO11G00440.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G00440.1
Unique Name	NO11G00440.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3999
Alignment location	chr11:188268..193909 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:188268..193909 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO11G00440.1 vs.
Match: EWM25191.1 (c6 finger domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 139.4 bits (350), Expect = 5.400e-29
Identity = 130/353 (36.83%), Postives = 179/353 (50.71%), Query Frame = 0

Query:  557 AAATVPTKFEEEGGGGGRGGGGGGG---GGGGGNGGRLLSRVAAFLHSNTIDEQRARATLLSWHGWNRHHDDRDCTEDILAPLAALMGVSLPPSLPPSLPSSLPPAAKGPGKK---EEEEKGGKEGKVEAEKEKRGDLKKVLEAAVAVATAQKEENEKEEKEEGGRVGGREGGARKRWKVSPASLNAALASAAALQREGGMEAEGGKEGGKKEGVMPLLTKEELDVLSFLRVGKDLTTAGAACCSVAWCNGTPVERHVNERFHAMFMPRSTFLASSLLPFLLWAEFIAPEAREIFFDSLLALSLTKAAAAAVETKMYLPVLDRWGLKLPATVHLRVFLSGDGELSAAMLLIEP 904
            AA+  P   + E GGG R G G  G    GGG   G  LSR+AAFL  NT+   + RATL +WH W ++H  +D T+ +L  L+ LM VSLPPS PPS  +    A+ G G     EE  KGG    +  +K                           + E+GG  GG EG  RK  ++  A   A    +  +++E G    GGK GG +    P    +E  +L+FLRVGK ++  G ACC++ +     V   VNERF   FM R++  AS+L+P LLW + IA E+R+ + D  L L +   +    E +  L V DR G+ +PA V LR F+S +G + A ML IEP
Sbjct:  252 AASVTPRTQDPETGGGQRMGRGEEGVRKEGGGDQDGTFLSRIAAFLQQNTLQGTKPRATLHTWHHWGQYHG-QDGTKGLLPLLSVLMQVSLPPSRPPSTAARTFQASGGGGGLRGCEEVTKGGDSEGMVTQKTI-------------------------DWEKGGEEGGFEG--RKMREMMRARWLAI--KSQTIKQEKGEGGGGGKGGGNRTDASP---SDEERMLTFLRVGKGISHCGPACCTIGFHRDAGVSVDVNERFENRFMSRNSLQASTLIPPLLWQQCIASESRDAYVDIFLNL-VFGPSPVPTEVRSELLVQDRGGVIVPARVCLRYFVSDNGNMHAIMLAIEP 570

The following BLAST results are available for this feature:

BLAST of NO11G00440.1 vs.

BLAST of NO11G00440.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25191.1	5.400e-29	36.83	c6 finger domain-containing protein [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO11G00440	NO11G00440	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO11G00440.1	NO11G00440.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO11G00440.1.cds1	NO11G00440.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.1.cds2	NO11G00440.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.1.cds3	NO11G00440.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.1.cds4	NO11G00440.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.1.cds5	NO11G00440.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.1.cds6	NO11G00440.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.1.cds7	NO11G00440.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.1.cds8	NO11G00440.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G00440.1.cds9	NO11G00440.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr11:188268..193909-
coding sequence from alignment at chr11:188268..193909-

mRNA sequence

>NO11G00440.1 ID=NO11G00440.1|Name=NO11G00440.1|organism=Nannochloropsis oceanica|type=mRNA|length=3999bp
ATGTCCCTACCAAAACGGCGTGGAAGTGACGAGGGGCGTTGTAGCAAGTC
GCAACCAAGCAATGTCCGTGACGGTGACTTGGGCACGGATGAAAAGCGAC
GACGAAAGGAAGCAGTCGTAACTGCAGCACCACCACCAGCAGCAGCACCA
CCACCACCATCACCACTAGGAGGAGAAGAGGTTGTAGCTGCAACACTCGC
CTCCGGCTTCGGTAGCGTTGTTGTAGGCGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGCGGAATGTACGGGAGCTGTTATCCTTATAACGTGTCAATG
TATTCGAACGTTGCTGGTGGCGGGGAGGGTAGAGGAGGAGTAGGAGATGA
AGGAAGAGGAGGAGGAGGAGGGAGGCTTGAAGGGAAAGGAGAGGGAGAAA
TGGGGCTAGGAGGAAGGGTGCGGATGGAGAGGGGGGGGACGTGCGGAGAG
TGCAAGCTGAGTAAGGTAAAGTGCGACAGAGCCCAACCTGTCTGCGGTCG
GTGCAAGCGGCGGAATCTTGTATGCGTGCCCCAGATGCGAGGGCCAGGGC
GGCCGGTGGGATCCTATGCTAGATCCGCCCCTGGCAGTCGCGACCCCGAC
GATCTCAAGCAGCAACAACAGCAGCAGATGTACCTCCAGGACCAGGAGTA
CTACCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGTACCATTACAACCATAATCACCATCACCAGCAGCAGCAGCA
ACACAACCACACAGGATCTTTGGAACGACCGTACCCGGACCAACCACCCC
CCGGCCCCTCCCTCTCGTCCTCCTTCGGCCCTCCCTTCTTCCCTCCCCCT
CCTCCTCCCTACGCGCGATCCACCTACCCTGGCAATTACCAACACTACCA
ACCACAGCAACAGCAGCAACAACAGTACCATCAGTATCAACTGCAGCAAC
ACCATTATCCGCAGCAGCAGTATCAGCAGCACCAGCAACAGCAACAGCAA
CAGCCGCAGCAGCAGGCGATGTCTAACACCCCGGCATTTTCGGACTTTAT
CCATCCAGTGGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGCGGC
GGGGGGGGGAAGCTCCTCCCCACCCCGAGAGCAACATAGATATGGAGACC
CATATCCGCGCCGCCTCTTCCCTCGAAAAGCTTGCCCGCGGACATCTCCC
TCCCTCCCTCCCTCACTCCCTTCCTCATTCCAATCCCAACACCACTATCG
CCACCTTCTCCTCCTCTTTCTCCGTCTCCTCCTCCACCAATCCTGCCCTC
ACCAACGGCAGCACCAACGGCAGCAGCAACGGTCTCAGCAACGGTTTCAG
CAACGGTTTCAGCCACCTTCCACCTCCCACCCGCGACAACAACAGCAGCA
GCAGGTCTTCCTTCTTCCCCTCTTCCTTTCCCCCTCCCTCCTCCCCTCCC
TCCTCCCCTCCCCCCTTTCAAGCGACCTACAGCCAGCATAATGCTCCTCC
GCCACCTCCTCCTCTTCCTCCTTCTTCTTCCCTTCCTTCGATTCCCTCCC
CTCCTCCCTCTTCCTCCTCCTCCCACCAACTCGCCACAGCAGCAACAACA
GCAACAGCAGCCGCAACAGCAGCCGCAACGGTGCCAACAAAGTTTGAAGA
GGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGGAACGGAGGAAGGCTCTTGTCACGTGTGGCGGCATTCCTACAC
TCCAACACTATCGACGAGCAAAGGGCCCGTGCTACCTTGCTCTCCTGGCA
TGGTTGGAATAGGCATCATGATGACCGTGATTGCACGGAGGATATACTTG
CCCCTCTCGCAGCCCTGATGGGTGTCTCCCTCCCTCCTTCCCTCCCTCCC
TCCCTCCCTTCCTCCCTCCCTCCTGCTGCGAAGGGCCCCGGGAAAAAGGA
GGAGGAGGAGAAGGGAGGGAAAGAGGGGAAGGTGGAGGCGGAGAAGGAGA
AGAGGGGGGATTTGAAAAAGGTGCTTGAAGCAGCAGTAGCAGTAGCAACA
GCACAGAAAGAGGAAAATGAGAAGGAGGAGAAGGAGGAGGGAGGAAGGGT
GGGAGGGAGGGAAGGAGGGGCGAGGAAACGTTGGAAGGTCTCTCCAGCCT
CTCTGAATGCCGCCTTGGCGTCTGCTGCCGCCCTACAGAGGGAGGGAGGG
ATGGAGGCGGAGGGAGGGAAGGAGGGAGGGAAGAAGGAGGGGGTCATGCC
CCTTCTGACGAAGGAGGAGTTGGACGTGCTTTCTTTTTTGCGCGTGGGAA
AGGATTTGACGACTGCAGGCGCTGCCTGCTGTTCTGTCGCCTGGTGCAAC
GGAACGCCCGTTGAGCGACACGTTAACGAACGTTTCCACGCCATGTTCAT
GCCCAGATCGACCTTCCTGGCCTCCTCCCTCCTCCCCTTCCTCCTCTGGG
CCGAGTTCATCGCACCGGAGGCACGAGAAATATTCTTTGACTCACTCCTG
GCCTTGTCCTTGACGAAGGCGGCAGCGGCGGCGGTGGAAACCAAGATGTA
TCTACCGGTCCTCGACAGGTGGGGATTAAAGCTACCGGCTACGGTGCATC
TACGTGTCTTTTTGTCCGGTGATGGCGAGTTAAGTGCCGCCATGCTCTTG
ATCGAGCCCCGCTCCTACGGGTAGTGAAGGTGAAATGGATTCAAAGGGGT
GTGCTGCATGTACCTTTTACATGTTTCAGGCCTTCAAAGCGAACTTCAAA
GCGAAGCGTTTCAAACCGTTTCAAATTGATTCCAACCGTTTGATTCATTC
GCACCGGACTCCTTCGATCGAGGGAATGATTCAACAAGTGAGTCTATAAA
TCAATAAACCGTAAATTGATAAATTCACCTTAATTAAAATATAACAAGGG
GTGTGTTTGACTCTCCCAAAAATCCTTCACTAGACTATTTGAGGAGTTTA
GGCCCTTAAATAGCGAAGTCGAGCTGTCTAGGGGTAGGGCAGCGTCTCAA
GTGCTACAAGTAGGAGTTAAGGGCTCCTCCTTCCCAGGCTCTTACAAAGC
AACACTGCCTTAAATAGGGGAAATGACCATTTTGGTAGTACAAGCTTCCT
TTACATGCCTGCCTCGCCACCGATCACATAAGAACAAAACATATGGACCG
TATGTGGTCTTGTGGCTGTGTGAGGACACAAAATTGACGAAAGTAGTTAC
ACAGAAAGCATTATCCGCCTTGTTCACATTACCCCGTTCATGTCCTTGCG
CCCACGGGGGCCACTAGGCAGGCACCCCAAAAAATAATGCTGCTGTCGGT
ACATGTGGATGGCAAGAAGCACATGTACACATGTTGACAATGGACTCCTG
GGTCGCGTTAATGGTGTGTGTTTTGCTATTTGAGGGCTCCTTTCGCTATT
TGAGGATGCCTTTGCTATTTGATGGTTATCCTCCCGGTCGAATACACTCC
TGGGCCAGATCTTAAATAGAAATCTTAGGTAAATATGTAAGGGTAGCTGC
TGGTTACGGTTGCGGAGTTGAGCAGCCCCTTTAATTAACAATAAATATAT
AGAGAATTAAACCATTAATGGATCATCCATTTTTTGGGAAAGTCAATAAT
AAATAAATAGGAGGTCAATAACAATTGCCTTCCAAATATTACCATGTATG
CGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAG
AGGAGAGAGAGAGGAGAGAGAGGGATGAAATGAGAGAGACGGCCTTTCCT
GGCCACGAATATGAAGGTCACAAAGAAGTAGAAGACGAAGAGTGGAGAGA
GAAAAGAAATGGAGAGATTAATTGTTGGAGGAGGAGGAGGAGGAGAAACG
TGGGGACGGTTTCTCGGAGATTGGGAAATTGGACGAAAATTCGATATTTG
AAGGGACAAATCGATACCCGGAGAAATCACCAATTATAGTCTCCACGAG

protein sequence of NO11G00440.1

>NO11G00440.1-protein ID=NO11G00440.1-protein|Name=NO11G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=908bp
MSLPKRRGSDEGRCSKSQPSNVRDGDLGTDEKRRRKEAVVTAAPPPAAAP
PPPSPLGGEEVVAATLASGFGSVVVGGGGGGGGGGGGGMYGSCYPYNVSM
YSNVAGGGEGRGGVGDEGRGGGGGRLEGKGEGEMGLGGRVRMERGGTCGE
CKLSKVKCDRAQPVCGRCKRRNLVCVPQMRGPGRPVGSYARSAPGSRDPD
DLKQQQQQQMYLQDQEYYQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQYHYNHNHHHQQQQQHNHTGSLERPYPDQPPPGPSLSSSFGPPFFPPP
PPPYARSTYPGNYQHYQPQQQQQQQYHQYQLQQHHYPQQQYQQHQQQQQQ
QPQQQAMSNTPAFSDFIHPVERGGGGGGGGGGRRGGEAPPHPESNIDMET
HIRAASSLEKLARGHLPPSLPHSLPHSNPNTTIATFSSSFSVSSSTNPAL
TNGSTNGSSNGLSNGFSNGFSHLPPPTRDNNSSSRSSFFPSSFPPPSSPP
SSPPPFQATYSQHNAPPPPPPLPPSSSLPSIPSPPPSSSSSHQLATAATT
ATAAATAAATVPTKFEEEGGGGGRGGGGGGGGGGGGNGGRLLSRVAAFLH
SNTIDEQRARATLLSWHGWNRHHDDRDCTEDILAPLAALMGVSLPPSLPP
SLPSSLPPAAKGPGKKEEEEKGGKEGKVEAEKEKRGDLKKVLEAAVAVAT
AQKEENEKEEKEEGGRVGGREGGARKRWKVSPASLNAALASAAALQREGG
MEAEGGKEGGKKEGVMPLLTKEELDVLSFLRVGKDLTTAGAACCSVAWCN
GTPVERHVNERFHAMFMPRSTFLASSLLPFLLWAEFIAPEAREIFFDSLL
ALSLTKAAAAAVETKMYLPVLDRWGLKLPATVHLRVFLSGDGELSAAMLL
IEPRSYG*

mRNA from alignment at chr11:188268..193909-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO11G00440.1 ID=NO11G00440.1|Name=NO11G00440.1|organism=Nannochloropsis oceanica|type=mRNA|length=5642bp|location=Sequence derived from alignment at chr11:188268..193909- (Nannochloropsis oceanica)
ATGTCCCTACCAAAACGGCGTGGAAGTGACGAGGGGCGTTGTAGCAAGTC
GCAACCAAGCAATGTCCGTGACGGTGACTTGGGCACGGATGAAAAGCGAC
GACGAAAGGAAGCAGTCGTAACTGCAGCACCACCACCAGCAGCAGCACCA
CCACCACCATCACCACTAGGAGGAGAAGAGGTTGTAGCTGCAACACTCGC
CTCCGGCTTCGGTAGCGTTGTTGTAGGCGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGCGGAATGTACGGGAGCTGTTATCCTTATAACGTGTCAATG
TATTCGAACGTTGCTGGTGGCGGGGAGGGTAGAGGAGGAGTAGGAGATGA
AGGAAGAGGAGGAGGAGGAGGGAGGCTTGAAGGGAAAGGAGAGGGAGAAA
TGGGGCTAGGAGGAAGGGTGCGGATGGAGAGGGGGGGGACGTGCGGAGAG
TGCAAGCTGAGTAAGGTATGTATGTATTCGTATACTTATGGGTGTATTCA
TTTGATATTCGATGTGAGGGAGGGAGGAAGGAAGTGGCGAAGGAGGGATA
GATTGTCCTGTGGAGAGGGACGAGGAAGCAAAGGAGGAGGAGGAGGACGA
GGAAGAGGAGGAGGAGGAGGGAAGTACGGCAGGAAGGAGGGAAGAGGTTG
GCGGAGATTTTAAGCTGACTTCACGTTCAGGAGTATGTTCCGCTATTCCC
TTTCTCCTCGTTGACTTACACCTTCCCTACTTTCCTCCTTTCCTCGCCTC
TCTCCCTCCCCTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCTCTCCCTTC
CTTCCCCTTCCTCCCTCCCCCTGGTGCAGGTAAAGTGCGACAGAGCCCAA
CCTGTCTGCGGTCGGTGCAAGCGGCGGAATCTTGTATGCGTGCCCCAGAT
GCGAGGGCCAGGGCGGCCGGTGGGATCCTATGCTAGATCCGCCCCTGGCA
GGTGAGGGAGGGAGGGAGGGGGGGGGGGGAGAGGGAGGGAGGGAGGGAGG
GAGGAAAGGAGGGGGAGAGATTTATCCGTAATAAATGGTGTTTCTTGGAA
GTGTTAGAAAGGCACTCAGAAGGGGAAGAGAAGGAGAGGCAGGAACATGA
GACATTCTGACTACAGCGGTATATATTTACACAATCCATTCCTCCCTCCT
TTCCTCCCTCCTTTCCTCCCCCCCTCCCCCCTCCCTCCCTCCCCCCTTCC
CTCCTTGCCACCCTAGTCGCGACCCCGACGATCTCAAGCAGCAACAACAG
CAGCAGATGTACCTCCAGGACCAGGAGTACTACCAACAGCAGCAGCAGCA
GCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCATTACAAC
CATAATCACCATCACCAGCAGCAGCAGCAACACAACCACACAGGATCTTT
GGAACGACCGTACCCGGACCAACCACCCCCCGGCCCCTCCCTCTCGTCCT
CCTTCGGCCCTCCCTTCTTCCCTCCCCCTCCTCCTCCCTACGCGCGATCC
ACCTACCCTGGCAATTACCAACACTACCAACCACAGCAACAGCAGCAACA
ACAGTACCATCAGTATCAACTGCAGCAACACCATTATCCGCAGCAGCAGT
ATCAGCAGCACCAGCAACAGCAACAGCAACAGCCGCAGCAGCAGGCGATG
TCTGTCGCTGCCTCCCCTTTCCTACCCCCCCCCCCCCTCCTCTCTGTCCT
CCCTCCCTTCCTCCTCCCTCTTCAAGAACACCCCGGCATTTTCGGACTTT
ATCCATCCAGTGGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGCG
GCGGGGGGGGGAAGCTCCTCCCCACCCCGAGAGCAACATAGATGTACGTC
CCTCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCCTTTCTCCCTTCTTCCA
ATCCCAAGCCCACCTCATCACCCTCTGTACCATTCCCACCTTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCTTCCTTTCTCAGATGGAGACCCATATCCG
CGCCGCCTCTTCCCTCGAAAAGCTTGCCCGCGGACATCTCCCTCCCTCCC
TCCCTCACTCCCTTCCTCATTCCAATCCCAACACCACTATCGCCACCTTC
TCCTCCTCTTTCTCCGTCTCCTCCTCCACCAATCCTGCCCTCACCAACGG
CAGCACCAACGGCAGCAGCAACGGTCTCAGCAACGGTTTCAGCAACGGTT
TCAGCCACCTTCCACCTCCCACCCGCGACAACAACAGCAGCAGCAGGTCT
TCCTTCTTCCCCTCTTCCTTTCCCCCTCCCTCCTCCCCTCCCTCCTCCCC
TCCCCCCTTTCAAGCGACCTACAGCCAGCATAATGCTCCTCCGCCACCTC
CTCCTCTTCCTCCTTCTTCTTCCCTTCCTTCGATTCCCTCCCCTCCTCCC
TCTTCCTCCTCCTCCCACCAACTCGCCACAGCAGCAACAACAGCAACAGC
AGCCGCAACAGCAGCCGCAACGGTGCCAACAAAGTTTGAAGAGGAAGGAG
GAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGG
AACGGAGGAAGGCTCTTGTCACGTGTGGCGGCATTCCTACACTCCAACAC
TATCGACGAGCAAAGGGCCCGTGCTACCTTGTAAGCCCCCCCCCCCCCTC
CCTCCCTCCCTCTCTCCCCCCCTCCCTCCTTCTCTCCCGCCCTCCCTCTT
TCCTGCCTGTTCCCTCCACCTCCCCTGCTCCATCTTGTGTGTGGTGCACC
ATTTCCCTCATCATTCTCCCTTCCCGCCCTCCCTATCTTTATCCCTCCCT
CCCCCTCCAGGCTCTCCTGGCATGGTTGGAATAGGCATCATGATGACCGT
GATTGCACGGAGGATATACTTGCCCCTCTCGCAGCCCTGATGGGTGTCTC
CCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCTGCTG
CGAAGGGCCCCGGGAAAAAGGAGGAGGAGGAGAAGGGAGGGAAAGAGGGG
AAGGTGGAGGCGGAGAAGGAGAAGAGGGGGGATTTGAAAAAGGTGCTTGA
AGCAGCAGTAGCAGTAGCAACAGCACAGAAAGAGGAAAATGAGAAGGAGG
AGAAGGAGGAGGGAGGAAGGGTGGGAGGGAGGGAAGGAGGGGCGAGGAAA
CGTTGGAAGGTCTCTCCAGCCTCTCTGAATGCCGCCTTGGCGTCTGCTGC
CGCCCTACAGAGGGAGGGAGGGATGGAGGCGGAGGGAGGGAAGGAGGGAG
GGAAGAAGGAGGGGGTCATGCCCCTTCTGACGAAGGAGGAGTTGGACGTG
CTTTCTTTTTTGCGCGTGGGAAAGGTACGTGTACTCCCTCCCTCCTTCCC
TCCCTCCCTCCTTCCCTCCCTCCCCCCTCCCTCCCTCCCTCCTTCCTCCC
GTCCACCTTTCACTTGTCCTTGCCATCCTTCACTCCTTGCCTCCCTCTTC
CCCCCTCTATCCTCTCCCTCTCATCTCTTACCACCCTTTCCTCCTGCTCT
CCCTTCCAAGGATTTGACGACTGCAGGCGCTGCCTGCTGTTCTGTCGCCT
GGTGCAACGGAACGCCCGTTGAGCGACACGTTAACGAACGTTTCCACGCC
ATGTTCATGCCCAGGTAGGTAGGGAGGGAGGGAGGGACGGAAGGCAGTCA
CGTAAAGTGATTAGAGTAGAAGCGTTTCACCGTGCTCATGCCAAGGTCGA
AAGGGAGGGAAGGAAGGAGGGAGGGAGGGAGGGAGAGAAGGAGGGACGGA
GGGAGGGGGGTCGCCTTCTGTCCTACACTGCTTCCAAGTCCTCCCTTCCT
CGCCCCTTCCCTCCCTCTCCCTCTGCCCCTCCCTCTCCTCCCCGGTGAGC
CGAGTGCATGGCACCCACAACCCACACCCCTCTTTCCCTCCCTCCCTCCC
TCCCCTCCCCCCCTCAGATCGACCTTCCTGGCCTCCTCCCTCCTCCCCTT
CCTCCTCTGGGCCGAGTTCATCGCACCGGAGGCACGAGAAATATTCTTTG
ACTCACTCCTGGCCTTGTCCTTGACGAAGGCGGCAGCGGCGGCGGTGGAA
ACCAAGATGTATCTACCGGTACGTGAGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGTAGGGAGGGAGGGAGGGAAGAAAGGATGACAACGGGAACTT
CTTGCCAATTACCAACCTTCCCTCCCTCTCTCCCTCTTTCCCTCCCTCAG
GTCCTCGACAGGTGGGGATTAAAGCTACCGGCTACGGTGCATCTACGTGT
CTTTTTGTCCGGTGATGGCGAGTTAAGTGCCGCCATGCTCTTGATCGAGC
CCCGCTCCTACGGGTAGTGAAGGTGAAATGGATTCAAAGGGGTGTGCTGC
ATGTACCTTTTACATGTTTCAGGCCTTCAAAGCGAACTTCAAAGCGAAGC
GTTTCAAACCGTTTCAAATTGATTCCAACCGTTTGATTCATTCGCACCGG
ACTCCTTCGATCGAGGGAATGATTCAACAAGTGAGTCTATAAATCAATAA
ACCGTAAATTGATAAATTCACCTTAATTAAAATATAACAAGGGGTGTGTT
TGACTCTCCCAAAAATCCTTCACTAGACTATTTGAGGAGTTTAGGCCCTT
AAATAGCGAAGTCGAGCTGTCTAGGGGTAGGGCAGCGTCTCAAGTGCTAC
AAGTAGGAGTTAAGGGCTCCTCCTTCCCAGGCTCTTACAAAGCAACACTG
CCTTAAATAGGGGAAATGACCATTTTGGTAGTACAAGCTTCCTTTACATG
CCTGCCTCGCCACCGATCACATAAGAACAAAACATATGGACCGTATGTGG
TCTTGTGGCTGTGTGAGGACACAAAATTGACGAAAGTAGTTACACAGAAA
GCATTATCCGCCTTGTTCACATTACCCCGTTCATGTCCTTGCGCCCACGG
GGGCCACTAGGCAGGCACCCCAAAAAATAATGCTGCTGTCGGTACATGTG
GATGGCAAGAAGCACATGTACACATGTTGACAATGGACTCCTGGGTCGCG
TTAATGGTGTGTGTTTTGCTATTTGAGGGCTCCTTTCGCTATTTGAGGAT
GCCTTTGCTATTTGATGGTTATCCTCCCGGTCGAATACACTCCTGGGCCA
GATCTTAAATAGAAATCTTAGGTAAATATGTAAGGGTAGCTGCTGGTTAC
GGTTGCGGAGTTGAGCAGCCCCTTTAATTAACAATAAATATATAGAGAAT
TAAACCATTAATGGATCATCCATTTTTTGGGAAAGTCAATAATAAATAAA
TAGGAGGTCAATAACAATTGCCTTCCAAATATTACCATGTATGCGAGAGA
AAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGGAGAG
AGAGAGGAGAGAGAGGGATGAAATGAGAGAGACGGCCTTTCCTGGCCACG
AATATGAAGGTCACAAAGAAGTAGAAGACGAAGAGTGGAGAGAGAAAAGA
AATGGAGAGATTAATTGTTGGAGGAGGAGGAGGAGGAGAAACGTGGGGAC
GGTTTCTCGGAGATTGGGAAATTGGACGAAAATTCGATATTTGAAGGGAC
AAATCGATACCCGGAGAAATCACCAATTATAGTCTCCACGAG

Coding sequence (CDS) from alignment at chr11:188268..193909-

>NO11G00440.1 ID=NO11G00440.1|Name=NO11G00440.1|organism=Nannochloropsis oceanica|type=CDS|length=2724bp|location=Sequence derived from alignment at chr11:188268..193909- (Nannochloropsis oceanica)
ATGTCCCTACCAAAACGGCGTGGAAGTGACGAGGGGCGTTGTAGCAAGTC
GCAACCAAGCAATGTCCGTGACGGTGACTTGGGCACGGATGAAAAGCGAC
GACGAAAGGAAGCAGTCGTAACTGCAGCACCACCACCAGCAGCAGCACCA
CCACCACCATCACCACTAGGAGGAGAAGAGGTTGTAGCTGCAACACTCGC
CTCCGGCTTCGGTAGCGTTGTTGTAGGCGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGCGGAATGTACGGGAGCTGTTATCCTTATAACGTGTCAATG
TATTCGAACGTTGCTGGTGGCGGGGAGGGTAGAGGAGGAGTAGGAGATGA
AGGAAGAGGAGGAGGAGGAGGGAGGCTTGAAGGGAAAGGAGAGGGAGAAA
TGGGGCTAGGAGGAAGGGTGCGGATGGAGAGGGGGGGGACGTGCGGAGAG
TGCAAGCTGAGTAAGGTAAAGTGCGACAGAGCCCAACCTGTCTGCGGTCG
GTGCAAGCGGCGGAATCTTGTATGCGTGCCCCAGATGCGAGGGCCAGGGC
GGCCGGTGGGATCCTATGCTAGATCCGCCCCTGGCAGTCGCGACCCCGAC
GATCTCAAGCAGCAACAACAGCAGCAGATGTACCTCCAGGACCAGGAGTA
CTACCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGTACCATTACAACCATAATCACCATCACCAGCAGCAGCAGCA
ACACAACCACACAGGATCTTTGGAACGACCGTACCCGGACCAACCACCCC
CCGGCCCCTCCCTCTCGTCCTCCTTCGGCCCTCCCTTCTTCCCTCCCCCT
CCTCCTCCCTACGCGCGATCCACCTACCCTGGCAATTACCAACACTACCA
ACCACAGCAACAGCAGCAACAACAGTACCATCAGTATCAACTGCAGCAAC
ACCATTATCCGCAGCAGCAGTATCAGCAGCACCAGCAACAGCAACAGCAA
CAGCCGCAGCAGCAGGCGATGTCTAACACCCCGGCATTTTCGGACTTTAT
CCATCCAGTGGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGCGGC
GGGGGGGGGAAGCTCCTCCCCACCCCGAGAGCAACATAGATATGGAGACC
CATATCCGCGCCGCCTCTTCCCTCGAAAAGCTTGCCCGCGGACATCTCCC
TCCCTCCCTCCCTCACTCCCTTCCTCATTCCAATCCCAACACCACTATCG
CCACCTTCTCCTCCTCTTTCTCCGTCTCCTCCTCCACCAATCCTGCCCTC
ACCAACGGCAGCACCAACGGCAGCAGCAACGGTCTCAGCAACGGTTTCAG
CAACGGTTTCAGCCACCTTCCACCTCCCACCCGCGACAACAACAGCAGCA
GCAGGTCTTCCTTCTTCCCCTCTTCCTTTCCCCCTCCCTCCTCCCCTCCC
TCCTCCCCTCCCCCCTTTCAAGCGACCTACAGCCAGCATAATGCTCCTCC
GCCACCTCCTCCTCTTCCTCCTTCTTCTTCCCTTCCTTCGATTCCCTCCC
CTCCTCCCTCTTCCTCCTCCTCCCACCAACTCGCCACAGCAGCAACAACA
GCAACAGCAGCCGCAACAGCAGCCGCAACGGTGCCAACAAAGTTTGAAGA
GGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGGAACGGAGGAAGGCTCTTGTCACGTGTGGCGGCATTCCTACAC
TCCAACACTATCGACGAGCAAAGGGCCCGTGCTACCTTGCTCTCCTGGCA
TGGTTGGAATAGGCATCATGATGACCGTGATTGCACGGAGGATATACTTG
CCCCTCTCGCAGCCCTGATGGGTGTCTCCCTCCCTCCTTCCCTCCCTCCC
TCCCTCCCTTCCTCCCTCCCTCCTGCTGCGAAGGGCCCCGGGAAAAAGGA
GGAGGAGGAGAAGGGAGGGAAAGAGGGGAAGGTGGAGGCGGAGAAGGAGA
AGAGGGGGGATTTGAAAAAGGTGCTTGAAGCAGCAGTAGCAGTAGCAACA
GCACAGAAAGAGGAAAATGAGAAGGAGGAGAAGGAGGAGGGAGGAAGGGT
GGGAGGGAGGGAAGGAGGGGCGAGGAAACGTTGGAAGGTCTCTCCAGCCT
CTCTGAATGCCGCCTTGGCGTCTGCTGCCGCCCTACAGAGGGAGGGAGGG
ATGGAGGCGGAGGGAGGGAAGGAGGGAGGGAAGAAGGAGGGGGTCATGCC
CCTTCTGACGAAGGAGGAGTTGGACGTGCTTTCTTTTTTGCGCGTGGGAA
AGGATTTGACGACTGCAGGCGCTGCCTGCTGTTCTGTCGCCTGGTGCAAC
GGAACGCCCGTTGAGCGACACGTTAACGAACGTTTCCACGCCATGTTCAT
GCCCAGATCGACCTTCCTGGCCTCCTCCCTCCTCCCCTTCCTCCTCTGGG
CCGAGTTCATCGCACCGGAGGCACGAGAAATATTCTTTGACTCACTCCTG
GCCTTGTCCTTGACGAAGGCGGCAGCGGCGGCGGTGGAAACCAAGATGTA
TCTACCGGTCCTCGACAGGTGGGGATTAAAGCTACCGGCTACGGTGCATC
TACGTGTCTTTTTGTCCGGTGATGGCGAGTTAAGTGCCGCCATGCTCTTG
ATCGAGCCCCGCTCCTACGGGTAG

Synonyms

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