NO11G00360.1, NO11G00360.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO11G00360.1
Unique NameNO11G00360.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length952
Alignment locationchr11:158619..159686 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:158619..159686 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G00360.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00360NO11G00360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO11G00360.1NO11G00360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO11G00360.1.cds1NO11G00360.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO11G00360.1 ID=NO11G00360.1|Name=NO11G00360.1|organism=Nannochloropsis oceanica|type=mRNA|length=952bp
CAGGCCCATTTTCACTTTTCACCCCTTTGTCCATACGTTCAGTCATTTGA
GCCACGCATTGAACAATACACAGCACCAAGCCCTGGACGAAGACCAGCGA
CTCACACGCGTGGACGTCGTAAAAAAACGCGCCGTGCGCACGGTTGGAAG
CTATGAGGAATTCAAGAATTTGGTGGCTTGTGCCCACCTTAGACCGCTTA
CCCGCAAGGACATTCAGAATGTTGCCCAGCGCACGCAAGTATGGACTACG
ACGAGCAGTAGGGCGGCTGGGATGATCAACGTAAAAAGAAATGAAAGGAA
CGGAAGGAACAGTAATGCTCTATATGAGCTGCAAGATGAATATGACAGAA
AGAATGCGGCGACGACAATGCATGGAAATCAAAACTCCTCCTCTTCAATC
CCCTCATCCTCATCCGCTACCGCTACTACCCCCCTGACCTTTGAGCGTGA
ATGGCAGCAGCTGGCCAAAGCCGGCAAGACAAACCACGAAAAATTATCAC
TTCTTTCTGCTGGTGGAGCGTCATCTCTGAACCGGTGCTATGTCATGGGG
AAGGAGAAAAGAGAGATGAATGCTGATGTGTTTGGTGATGTGGTCGTAGT
GCTGTGGGAGGCATTGCAAGAAGAGGAAGGCAGTGGGGGTGGAAGTCGGA
AAATGGAGGAATACGATGGTCATGAAGGAAGGGAAGAGAAAACAGGTGTT
GATTTAATCACGGATGTCTTGGAGGTATTGCACGTTCTGACTAAGATTGA
TAGGATCCAGATCACCCTTGCGCTGCTGAGCAAGTCTCAGCGGGAGGCGA
TGAGTGCATTACTGGGAAGACTGGAGAGAGAGAAAAGGGAGGGAAAGGAT
GAGAGAAGGCAGCGCATGGAGGAGGTGCAGCGTGCGTTTTCATTTTTGGC
CCGTGGTGGAGGGAGAAAGCTAGAGGAGGCACGTGATACCGTTACGTTAT
AA
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protein sequence of NO11G00360.1

>NO11G00360.1-protein ID=NO11G00360.1-protein|Name=NO11G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=227bp
MINVKRNERNGRNSNALYELQDEYDRKNAATTMHGNQNSSSSIPSSSSAT
ATTPLTFEREWQQLAKAGKTNHEKLSLLSAGGASSLNRCYVMGKEKREMN
ADVFGDVVVVLWEALQEEEGSGGGSRKMEEYDGHEGREEKTGVDLITDVL
EVLHVLTKIDRIQITLALLSKSQREAMSALLGRLEREKREGKDERRQRME
EVQRAFSFLARGGGRKLEEARDTVTL*
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mRNA from alignment at chr11:158619..159686+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO11G00360.1 ID=NO11G00360.1|Name=NO11G00360.1|organism=Nannochloropsis oceanica|type=mRNA|length=1068bp|location=Sequence derived from alignment at chr11:158619..159686+ (Nannochloropsis oceanica)
CAGGCCCATTTTCACTTTTCACCCCTTTGTCCATACGTTCAGTCATTTGA
GCCACGCATTGAACAATACACAGGTAGCTTGGCTTGGCAGTAGTGTATTT
AGGTTCCAGATCCCCTCCCAAAGTAATGTCGCTTTGTTTTTCAGGCTCAT
TTTCCCCGAATCCTCCTTTCCTCCCCTTCCCCTCACAAGCACCAAGCCCT
GGACGAAGACCAGCGACTCACACGCGTGGACGTCGTAAAAAAACGCGCCG
TGCGCACGGTTGGAAGCTATGAGGAATTCAAGAATTTGGTGGCTTGTGCC
CACCTTAGACCGCTTACCCGCAAGGACATTCAGAATGTTGCCCAGCGCAC
GCAAGTATGGACTACGACGAGCAGTAGGGCGGCTGGGATGATCAACGTAA
AAAGAAATGAAAGGAACGGAAGGAACAGTAATGCTCTATATGAGCTGCAA
GATGAATATGACAGAAAGAATGCGGCGACGACAATGCATGGAAATCAAAA
CTCCTCCTCTTCAATCCCCTCATCCTCATCCGCTACCGCTACTACCCCCC
TGACCTTTGAGCGTGAATGGCAGCAGCTGGCCAAAGCCGGCAAGACAAAC
CACGAAAAATTATCACTTCTTTCTGCTGGTGGAGCGTCATCTCTGAACCG
GTGCTATGTCATGGGGAAGGAGAAAAGAGAGATGAATGCTGATGTGTTTG
GTGATGTGGTCGTAGTGCTGTGGGAGGCATTGCAAGAAGAGGAAGGCAGT
GGGGGTGGAAGTCGGAAAATGGAGGAATACGATGGTCATGAAGGAAGGGA
AGAGAAAACAGGTGTTGATTTAATCACGGATGTCTTGGAGGTATTGCACG
TTCTGACTAAGATTGATAGGATCCAGATCACCCTTGCGCTGCTGAGCAAG
TCTCAGCGGGAGGCGATGAGTGCATTACTGGGAAGACTGGAGAGAGAGAA
AAGGGAGGGAAAGGATGAGAGAAGGCAGCGCATGGAGGAGGTGCAGCGTG
CGTTTTCATTTTTGGCCCGTGGTGGAGGGAGAAAGCTAGAGGAGGCACGT
GATACCGTTACGTTATAA
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Coding sequence (CDS) from alignment at chr11:158619..159686+

>NO11G00360.1 ID=NO11G00360.1|Name=NO11G00360.1|organism=Nannochloropsis oceanica|type=CDS|length=681bp|location=Sequence derived from alignment at chr11:158619..159686+ (Nannochloropsis oceanica)
ATGATCAACGTAAAAAGAAATGAAAGGAACGGAAGGAACAGTAATGCTCT
ATATGAGCTGCAAGATGAATATGACAGAAAGAATGCGGCGACGACAATGC
ATGGAAATCAAAACTCCTCCTCTTCAATCCCCTCATCCTCATCCGCTACC
GCTACTACCCCCCTGACCTTTGAGCGTGAATGGCAGCAGCTGGCCAAAGC
CGGCAAGACAAACCACGAAAAATTATCACTTCTTTCTGCTGGTGGAGCGT
CATCTCTGAACCGGTGCTATGTCATGGGGAAGGAGAAAAGAGAGATGAAT
GCTGATGTGTTTGGTGATGTGGTCGTAGTGCTGTGGGAGGCATTGCAAGA
AGAGGAAGGCAGTGGGGGTGGAAGTCGGAAAATGGAGGAATACGATGGTC
ATGAAGGAAGGGAAGAGAAAACAGGTGTTGATTTAATCACGGATGTCTTG
GAGGTATTGCACGTTCTGACTAAGATTGATAGGATCCAGATCACCCTTGC
GCTGCTGAGCAAGTCTCAGCGGGAGGCGATGAGTGCATTACTGGGAAGAC
TGGAGAGAGAGAAAAGGGAGGGAAAGGATGAGAGAAGGCAGCGCATGGAG
GAGGTGCAGCGTGCGTTTTCATTTTTGGCCCGTGGTGGAGGGAGAAAGCT
AGAGGAGGCACGTGATACCGTTACGTTATAA
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Synonyms
Publications