NO10G04130.1, NO10G04130.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G04130.1
Unique NameNO10G04130.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1476
Alignment locationchr10:1242149..1243689 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1242149..1243689 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO10G04130.1 vs.
Match: EWM25618.1 (phosphoesterase pa-phosphatase related protein [Nannochloropsis gaditana])

HSP 1 Score: 469.2 bits (1206), Expect = 1.600e-128
Identity = 271/536 (50.56%), Postives = 349/536 (65.11%), Query Frame = 0
Query:   14 LLAVLLLALA-LFLETPTPTMANEHLHPWSELVTQAMVGHTLRNGAEPSKPLNPLANLLVGGRILSILHLAQWQALNEVLVTRNVSSLTAAKEQLRALMPCLQAALAGAGKHTLETLLPAGDAQVGLPALYAAQ---------SGDDN---------NADVVSAREIGVKVGKAVLSSRSNDGAATVLPPYLGANSTA-------DAGKWRPTPPLFLPGGAEQWSTA----------------------AYKQAYYEVKSVGNATSKERLLKDTEGAVFWCEQPDAIIFAIVGRVTEKMDVLEASRVYAMAAVAGLDARVASMDSKYFYSTWRPVTALPLGNGGILTAVPDFTPLLATPPTPEFPSAHAVHGEAIMEVLRQARGGGKGDEG-AEKAADQLDVNLTTPTVRGLEAGKR-------------SLQATTAAPTAAEAADVIPVVTRQYSSLTAVSEDLAYSRIYGGIHYRFTADKSLKLGTSVGQRVVDAFDAKFTKVGMMGKEQQKEESKKGEEGGEGGARRGLRTG 488
            +L+VLL   A  F+ T +  +A+  L PWS++VTQAMVG+TLR+   P +PLNPL NL+VGGRILSILHL+QWQA+NEVL   N SSL+AA EQL +L P L   +A AG H L  LLP G AQ  + AL AAQ         +G+D+          AD+  A+ +G   GKAVL SR +DG +  +PPY+GA + +       D G+WRPTPP F PGGA QW  A                      +Y+ +Y EV +VGN +S ER   +TE A+FW  QPDA++FA+VG+VTE+MD+LEA+R YA+A+VA +DARVA MD KYFYS+WRPVTALPLGNG  L A PDF P L TPPTPE+PS HAVHGEAI+EVLR+ARGGG+G  G  E+AAD  DV LTTPTV+G   G                ++   +     + A    VVTR+Y+SL+ VSEDLA SRI+GGIHYRFTA++SL++G  VG+RVV+ FDAK+TK+      +++++S +G     GG +RGLR G
Sbjct:   10 ILSVLLFHCAPCFIPTSSLAVAHPDLQPWSDIVTQAMVGYTLRSTENPMEPLNPLENLMVGGRILSILHLSQWQAINEVLAATNFSSLSAAIEQLPSLHPLLINTVAAAGNHVLTNLLPDGAAQAEISALCAAQARESRLPSGTGEDSGAAESSGPTEADLALAKRLGEATGKAVLESRRDDGTSRSIPPYVGATTASGVTGARDDKGRWRPTPPAFSPGGARQWKDATPYVLSSPGELRPPPPPDLRSPSYQVSYMEVATVGNRSSDERQPSETESAIFWTAQPDALLFAVVGQVTEEMDLLEATRTYALASVAAVDARVAIMDGKYFYSSWRPVTALPLGNGVGLPAFPDFAPYLTTPPTPEYPSGHAVHGEAIVEVLRRARGGGRGLGGEKERAADACDVVLTTPTVQGESGGGARRVVKAEKQGRGGKVEGRMSGDPPGQVAPQPMVVTRRYASLSEVSEDLALSRIFGGIHYRFTAEQSLEMGVRVGRRVVEGFDAKYTKL-----TREEDDSAQGARLESGGGKRGLRVG 540          
The following BLAST results are available for this feature:
BLAST of NO10G04130.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25618.11.600e-12850.56phosphoesterase pa-phosphatase related protein [Na... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G04130NO10G04130Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G04130.1NO10G04130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G04130.1.cds1NO10G04130.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G04130.1.cds2NO10G04130.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G04130.1 ID=NO10G04130.1|Name=NO10G04130.1|organism=Nannochloropsis oceanica|type=mRNA|length=1476bp
ATGCCACCAGCACATCATTCTCCTTCCTCCATCCCTCGCCTCCTCGCGGT
CCTCCTCCTCGCCCTTGCCCTTTTCCTCGAGACGCCAACCCCCACCATGG
CCAACGAGCACCTCCATCCTTGGTCCGAGCTGGTGACGCAAGCCATGGTG
GGCCATACCCTCCGCAATGGCGCCGAACCCAGCAAGCCCCTCAACCCCCT
TGCCAACCTCCTGGTAGGCGGCCGCATCCTCTCCATCCTCCACCTTGCCC
AGTGGCAGGCCCTCAACGAGGTGCTTGTGACGCGGAACGTTTCATCGCTT
ACTGCCGCAAAGGAGCAGCTTCGCGCTCTCATGCCCTGTCTGCAAGCTGC
CTTGGCTGGGGCGGGCAAGCACACCCTTGAGACCCTTTTGCCCGCAGGGG
ATGCCCAAGTTGGACTCCCCGCTCTATACGCTGCCCAATCAGGCGACGAC
AATAATGCCGATGTAGTCAGTGCCCGAGAGATAGGAGTTAAAGTGGGCAA
GGCCGTGCTATCATCTCGCAGCAACGACGGAGCCGCCACCGTCCTCCCTC
CCTACCTCGGCGCCAACTCCACGGCCGATGCCGGCAAATGGCGACCCACT
CCGCCCTTGTTTCTGCCGGGGGGCGCGGAGCAGTGGAGTACGGCCGCCTA
CAAGCAGGCATACTACGAGGTGAAATCGGTGGGCAACGCTACGTCCAAGG
AACGGCTCTTGAAGGACACGGAGGGCGCGGTCTTCTGGTGTGAGCAACCG
GACGCTATCATCTTTGCGATAGTGGGCCGCGTCACGGAGAAGATGGACGT
GCTGGAGGCCTCGCGCGTGTATGCTATGGCGGCCGTGGCGGGATTAGACG
CCCGGGTGGCCTCCATGGACAGCAAATACTTTTACAGCACCTGGCGGCCC
GTGACGGCCCTGCCCCTCGGCAACGGTGGGATACTGACGGCAGTGCCTGA
TTTCACCCCGCTGTTGGCTACCCCGCCTACGCCCGAGTTTCCATCGGCCC
ACGCGGTGCACGGCGAGGCGATTATGGAGGTGCTGCGGCAGGCGAGGGGG
GGAGGGAAGGGTGATGAGGGGGCGGAGAAGGCGGCCGACCAGCTGGACGT
CAACTTGACGACACCCACGGTGAGAGGGTTGGAAGCCGGGAAAAGAAGCT
TGCAGGCAACAACTGCAGCACCTACAGCAGCAGAAGCGGCGGATGTCATA
CCGGTGGTGACGAGGCAGTACAGCTCGCTGACTGCAGTGAGTGAAGACCT
AGCCTACTCCCGTATCTACGGCGGTATCCACTACCGCTTTACGGCCGACA
AAAGCTTGAAGCTGGGAACCAGCGTTGGGCAGCGGGTTGTGGATGCCTTC
GATGCTAAGTTCACGAAAGTGGGAATGATGGGAAAGGAGCAGCAAAAGGA
GGAGAGCAAGAAGGGGGAAGAGGGAGGGGAGGGGGGCGCGAGGCGGGGTT
TAAGGACAGGCAAAGTATCAGTATAA
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protein sequence of NO10G04130.1

>NO10G04130.1-protein ID=NO10G04130.1-protein|Name=NO10G04130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=492bp
MPPAHHSPSSIPRLLAVLLLALALFLETPTPTMANEHLHPWSELVTQAMV
GHTLRNGAEPSKPLNPLANLLVGGRILSILHLAQWQALNEVLVTRNVSSL
TAAKEQLRALMPCLQAALAGAGKHTLETLLPAGDAQVGLPALYAAQSGDD
NNADVVSAREIGVKVGKAVLSSRSNDGAATVLPPYLGANSTADAGKWRPT
PPLFLPGGAEQWSTAAYKQAYYEVKSVGNATSKERLLKDTEGAVFWCEQP
DAIIFAIVGRVTEKMDVLEASRVYAMAAVAGLDARVASMDSKYFYSTWRP
VTALPLGNGGILTAVPDFTPLLATPPTPEFPSAHAVHGEAIMEVLRQARG
GGKGDEGAEKAADQLDVNLTTPTVRGLEAGKRSLQATTAAPTAAEAADVI
PVVTRQYSSLTAVSEDLAYSRIYGGIHYRFTADKSLKLGTSVGQRVVDAF
DAKFTKVGMMGKEQQKEESKKGEEGGEGGARRGLRTGKVSV*
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mRNA from alignment at chr10:1242149..1243689-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G04130.1 ID=NO10G04130.1|Name=NO10G04130.1|organism=Nannochloropsis oceanica|type=mRNA|length=1541bp|location=Sequence derived from alignment at chr10:1242149..1243689- (Nannochloropsis oceanica)
ATGCCACCAGCACATCATTCTCCTTCCTCCATCCCTCGCCTCCTCGCGGT CCTCCTCCTCGCCCTTGCCCTTTTCCTCGAGACGCCAACCCCCACCATGG CCAACGAGCACCTCCATCCTTGGTCCGAGCTGGTGACGCAAGCCATGGTG GGCCATACCCTCCGCAATGGCGCCGAACCCAGCAAGCCCCTCAACCCCCT TGCCAACCTCCTGGTAGGCGGCCGCATCCTCTCCATCCTCCACCTTGCCC AGTGGCAGGCCCTCAACGAGGTGCTTGTGACGCGGAACGTTTCATCGCTT ACTGCCGCAAAGGAGCAGCTTCGCGCTCTCATGCCCTGTCTGCAAGCTGC CTTGGCTGGGGCGGGCAAGCACACCCTTGAGACCCTTTTGCCCGCAGGGG ATGCCCAAGTTGGACTCCCCGCTCTATACGCTGCCCAATCAGGCGACGAC AATAATGCCGATGTAGTCAGTGCCCGAGAGATAGGAGTTAAAGTGGGCAA GGCCGTGCTATCATCTCGCAGCAACGACGGAGCCGCCACCGTCCTCCCTC CCTACCTCGGCGCCAACTCCACGGCCGATGCCGGCAAATGGCGACCCACT CCGCCCTTGTTTCTGCCGGGGGGCGCGGAGCAGTGGAGGTGGGTGACGCC CTATATTCTGACCAGTCCGCAAGAGCTGCGCACTCCTCCCCCCCGGGCCT CAGTACGGCCGCCTACAAGCAGGCATACTACGAGGTGAAATCGGTGGGCA ACGCTACGTCCAAGGAACGGCTCTTGAAGGACACGGAGGGCGCGGTCTTC TGGTGTGAGCAACCGGACGCTATCATCTTTGCGATAGTGGGCCGCGTCAC GGAGAAGATGGACGTGCTGGAGGCCTCGCGCGTGTATGCTATGGCGGCCG TGGCGGGATTAGACGCCCGGGTGGCCTCCATGGACAGCAAATACTTTTAC AGCACCTGGCGGCCCGTGACGGCCCTGCCCCTCGGCAACGGTGGGATACT GACGGCAGTGCCTGATTTCACCCCGCTGTTGGCTACCCCGCCTACGCCCG AGTTTCCATCGGCCCACGCGGTGCACGGCGAGGCGATTATGGAGGTGCTG CGGCAGGCGAGGGGGGGAGGGAAGGGTGATGAGGGGGCGGAGAAGGCGGC CGACCAGCTGGACGTCAACTTGACGACACCCACGGTGAGAGGGTTGGAAG CCGGGAAAAGAAGCTTGCAGGCAACAACTGCAGCACCTACAGCAGCAGAA GCGGCGGATGTCATACCGGTGGTGACGAGGCAGTACAGCTCGCTGACTGC AGTGAGTGAAGACCTAGCCTACTCCCGTATCTACGGCGGTATCCACTACC GCTTTACGGCCGACAAAAGCTTGAAGCTGGGAACCAGCGTTGGGCAGCGG GTTGTGGATGCCTTCGATGCTAAGTTCACGAAAGTGGGAATGATGGGAAA GGAGCAGCAAAAGGAGGAGAGCAAGAAGGGGGAAGAGGGAGGGGAGGGGG GCGCGAGGCGGGGTTTAAGGACAGGCAAAGTATCAGTATAA
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Coding sequence (CDS) from alignment at chr10:1242149..1243689-

>NO10G04130.1 ID=NO10G04130.1|Name=NO10G04130.1|organism=Nannochloropsis oceanica|type=CDS|length=1476bp|location=Sequence derived from alignment at chr10:1242149..1243689- (Nannochloropsis oceanica)
ATGCCACCAGCACATCATTCTCCTTCCTCCATCCCTCGCCTCCTCGCGGT
CCTCCTCCTCGCCCTTGCCCTTTTCCTCGAGACGCCAACCCCCACCATGG
CCAACGAGCACCTCCATCCTTGGTCCGAGCTGGTGACGCAAGCCATGGTG
GGCCATACCCTCCGCAATGGCGCCGAACCCAGCAAGCCCCTCAACCCCCT
TGCCAACCTCCTGGTAGGCGGCCGCATCCTCTCCATCCTCCACCTTGCCC
AGTGGCAGGCCCTCAACGAGGTGCTTGTGACGCGGAACGTTTCATCGCTT
ACTGCCGCAAAGGAGCAGCTTCGCGCTCTCATGCCCTGTCTGCAAGCTGC
CTTGGCTGGGGCGGGCAAGCACACCCTTGAGACCCTTTTGCCCGCAGGGG
ATGCCCAAGTTGGACTCCCCGCTCTATACGCTGCCCAATCAGGCGACGAC
AATAATGCCGATGTAGTCAGTGCCCGAGAGATAGGAGTTAAAGTGGGCAA
GGCCGTGCTATCATCTCGCAGCAACGACGGAGCCGCCACCGTCCTCCCTC
CCTACCTCGGCGCCAACTCCACGGCCGATGCCGGCAAATGGCGACCCACT
CCGCCCTTGTTTCTGCCGGGGGGCGCGGAGCAGTGGAGTACGGCCGCCTA
CAAGCAGGCATACTACGAGGTGAAATCGGTGGGCAACGCTACGTCCAAGG
AACGGCTCTTGAAGGACACGGAGGGCGCGGTCTTCTGGTGTGAGCAACCG
GACGCTATCATCTTTGCGATAGTGGGCCGCGTCACGGAGAAGATGGACGT
GCTGGAGGCCTCGCGCGTGTATGCTATGGCGGCCGTGGCGGGATTAGACG
CCCGGGTGGCCTCCATGGACAGCAAATACTTTTACAGCACCTGGCGGCCC
GTGACGGCCCTGCCCCTCGGCAACGGTGGGATACTGACGGCAGTGCCTGA
TTTCACCCCGCTGTTGGCTACCCCGCCTACGCCCGAGTTTCCATCGGCCC
ACGCGGTGCACGGCGAGGCGATTATGGAGGTGCTGCGGCAGGCGAGGGGG
GGAGGGAAGGGTGATGAGGGGGCGGAGAAGGCGGCCGACCAGCTGGACGT
CAACTTGACGACACCCACGGTGAGAGGGTTGGAAGCCGGGAAAAGAAGCT
TGCAGGCAACAACTGCAGCACCTACAGCAGCAGAAGCGGCGGATGTCATA
CCGGTGGTGACGAGGCAGTACAGCTCGCTGACTGCAGTGAGTGAAGACCT
AGCCTACTCCCGTATCTACGGCGGTATCCACTACCGCTTTACGGCCGACA
AAAGCTTGAAGCTGGGAACCAGCGTTGGGCAGCGGGTTGTGGATGCCTTC
GATGCTAAGTTCACGAAAGTGGGAATGATGGGAAAGGAGCAGCAAAAGGA
GGAGAGCAAGAAGGGGGAAGAGGGAGGGGAGGGGGGCGCGAGGCGGGGTT
TAAGGACAGGCAAAGTATCAGTATAA
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Synonyms
Publications