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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr10 | genome | chr10:1242149..1243689 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO10G04130.1 vs.
Match: EWM25618.1 (phosphoesterase pa-phosphatase related protein [Nannochloropsis gaditana]) HSP 1 Score: 469.2 bits (1206), Expect = 1.600e-128 Identity = 271/536 (50.56%), Postives = 349/536 (65.11%), Query Frame = 0
Query: 14 LLAVLLLALA-LFLETPTPTMANEHLHPWSELVTQAMVGHTLRNGAEPSKPLNPLANLLVGGRILSILHLAQWQALNEVLVTRNVSSLTAAKEQLRALMPCLQAALAGAGKHTLETLLPAGDAQVGLPALYAAQ---------SGDDN---------NADVVSAREIGVKVGKAVLSSRSNDGAATVLPPYLGANSTA-------DAGKWRPTPPLFLPGGAEQWSTA----------------------AYKQAYYEVKSVGNATSKERLLKDTEGAVFWCEQPDAIIFAIVGRVTEKMDVLEASRVYAMAAVAGLDARVASMDSKYFYSTWRPVTALPLGNGGILTAVPDFTPLLATPPTPEFPSAHAVHGEAIMEVLRQARGGGKGDEG-AEKAADQLDVNLTTPTVRGLEAGKR-------------SLQATTAAPTAAEAADVIPVVTRQYSSLTAVSEDLAYSRIYGGIHYRFTADKSLKLGTSVGQRVVDAFDAKFTKVGMMGKEQQKEESKKGEEGGEGGARRGLRTG 488
+L+VLL A F+ T + +A+ L PWS++VTQAMVG+TLR+ P +PLNPL NL+VGGRILSILHL+QWQA+NEVL N SSL+AA EQL +L P L +A AG H L LLP G AQ + AL AAQ +G+D+ AD+ A+ +G GKAVL SR +DG + +PPY+GA + + D G+WRPTPP F PGGA QW A +Y+ +Y EV +VGN +S ER +TE A+FW QPDA++FA+VG+VTE+MD+LEA+R YA+A+VA +DARVA MD KYFYS+WRPVTALPLGNG L A PDF P L TPPTPE+PS HAVHGEAI+EVLR+ARGGG+G G E+AAD DV LTTPTV+G G ++ + + A VVTR+Y+SL+ VSEDLA SRI+GGIHYRFTA++SL++G VG+RVV+ FDAK+TK+ +++++S +G GG +RGLR G
Sbjct: 10 ILSVLLFHCAPCFIPTSSLAVAHPDLQPWSDIVTQAMVGYTLRSTENPMEPLNPLENLMVGGRILSILHLSQWQAINEVLAATNFSSLSAAIEQLPSLHPLLINTVAAAGNHVLTNLLPDGAAQAEISALCAAQARESRLPSGTGEDSGAAESSGPTEADLALAKRLGEATGKAVLESRRDDGTSRSIPPYVGATTASGVTGARDDKGRWRPTPPAFSPGGARQWKDATPYVLSSPGELRPPPPPDLRSPSYQVSYMEVATVGNRSSDERQPSETESAIFWTAQPDALLFAVVGQVTEEMDLLEATRTYALASVAAVDARVAIMDGKYFYSSWRPVTALPLGNGVGLPAFPDFAPYLTTPPTPEYPSGHAVHGEAIVEVLRRARGGGRGLGGEKERAADACDVVLTTPTVQGESGGGARRVVKAEKQGRGGKVEGRMSGDPPGQVAPQPMVVTRRYASLSEVSEDLALSRIFGGIHYRFTAEQSLEMGVRVGRRVVEGFDAKYTKL-----TREEDDSAQGARLESGGGKRGLRVG 540
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO10G04130.1 ID=NO10G04130.1|Name=NO10G04130.1|organism=Nannochloropsis oceanica|type=mRNA|length=1476bp ATGCCACCAGCACATCATTCTCCTTCCTCCATCCCTCGCCTCCTCGCGGT CCTCCTCCTCGCCCTTGCCCTTTTCCTCGAGACGCCAACCCCCACCATGG CCAACGAGCACCTCCATCCTTGGTCCGAGCTGGTGACGCAAGCCATGGTG GGCCATACCCTCCGCAATGGCGCCGAACCCAGCAAGCCCCTCAACCCCCT TGCCAACCTCCTGGTAGGCGGCCGCATCCTCTCCATCCTCCACCTTGCCC AGTGGCAGGCCCTCAACGAGGTGCTTGTGACGCGGAACGTTTCATCGCTT ACTGCCGCAAAGGAGCAGCTTCGCGCTCTCATGCCCTGTCTGCAAGCTGC CTTGGCTGGGGCGGGCAAGCACACCCTTGAGACCCTTTTGCCCGCAGGGG ATGCCCAAGTTGGACTCCCCGCTCTATACGCTGCCCAATCAGGCGACGAC AATAATGCCGATGTAGTCAGTGCCCGAGAGATAGGAGTTAAAGTGGGCAA GGCCGTGCTATCATCTCGCAGCAACGACGGAGCCGCCACCGTCCTCCCTC CCTACCTCGGCGCCAACTCCACGGCCGATGCCGGCAAATGGCGACCCACT CCGCCCTTGTTTCTGCCGGGGGGCGCGGAGCAGTGGAGTACGGCCGCCTA CAAGCAGGCATACTACGAGGTGAAATCGGTGGGCAACGCTACGTCCAAGG AACGGCTCTTGAAGGACACGGAGGGCGCGGTCTTCTGGTGTGAGCAACCG GACGCTATCATCTTTGCGATAGTGGGCCGCGTCACGGAGAAGATGGACGT GCTGGAGGCCTCGCGCGTGTATGCTATGGCGGCCGTGGCGGGATTAGACG CCCGGGTGGCCTCCATGGACAGCAAATACTTTTACAGCACCTGGCGGCCC GTGACGGCCCTGCCCCTCGGCAACGGTGGGATACTGACGGCAGTGCCTGA TTTCACCCCGCTGTTGGCTACCCCGCCTACGCCCGAGTTTCCATCGGCCC ACGCGGTGCACGGCGAGGCGATTATGGAGGTGCTGCGGCAGGCGAGGGGG GGAGGGAAGGGTGATGAGGGGGCGGAGAAGGCGGCCGACCAGCTGGACGT CAACTTGACGACACCCACGGTGAGAGGGTTGGAAGCCGGGAAAAGAAGCT TGCAGGCAACAACTGCAGCACCTACAGCAGCAGAAGCGGCGGATGTCATA CCGGTGGTGACGAGGCAGTACAGCTCGCTGACTGCAGTGAGTGAAGACCT AGCCTACTCCCGTATCTACGGCGGTATCCACTACCGCTTTACGGCCGACA AAAGCTTGAAGCTGGGAACCAGCGTTGGGCAGCGGGTTGTGGATGCCTTC GATGCTAAGTTCACGAAAGTGGGAATGATGGGAAAGGAGCAGCAAAAGGA GGAGAGCAAGAAGGGGGAAGAGGGAGGGGAGGGGGGCGCGAGGCGGGGTT TAAGGACAGGCAAAGTATCAGTATAA back to topprotein sequence of NO10G04130.1 >NO10G04130.1-protein ID=NO10G04130.1-protein|Name=NO10G04130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=492bp MPPAHHSPSSIPRLLAVLLLALALFLETPTPTMANEHLHPWSELVTQAMV GHTLRNGAEPSKPLNPLANLLVGGRILSILHLAQWQALNEVLVTRNVSSL TAAKEQLRALMPCLQAALAGAGKHTLETLLPAGDAQVGLPALYAAQSGDD NNADVVSAREIGVKVGKAVLSSRSNDGAATVLPPYLGANSTADAGKWRPT PPLFLPGGAEQWSTAAYKQAYYEVKSVGNATSKERLLKDTEGAVFWCEQP DAIIFAIVGRVTEKMDVLEASRVYAMAAVAGLDARVASMDSKYFYSTWRP VTALPLGNGGILTAVPDFTPLLATPPTPEFPSAHAVHGEAIMEVLRQARG GGKGDEGAEKAADQLDVNLTTPTVRGLEAGKRSLQATTAAPTAAEAADVI PVVTRQYSSLTAVSEDLAYSRIYGGIHYRFTADKSLKLGTSVGQRVVDAF DAKFTKVGMMGKEQQKEESKKGEEGGEGGARRGLRTGKVSV* back to topmRNA from alignment at chr10:1242149..1243689- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO10G04130.1 ID=NO10G04130.1|Name=NO10G04130.1|organism=Nannochloropsis oceanica|type=mRNA|length=1541bp|location=Sequence derived from alignment at chr10:1242149..1243689- (Nannochloropsis oceanica) ATGCCACCAGCACATCATTCTCCTTCCTCCATCCCTCGCCTCCTCGCGGT
CCTCCTCCTCGCCCTTGCCCTTTTCCTCGAGACGCCAACCCCCACCATGG
CCAACGAGCACCTCCATCCTTGGTCCGAGCTGGTGACGCAAGCCATGGTG
GGCCATACCCTCCGCAATGGCGCCGAACCCAGCAAGCCCCTCAACCCCCT
TGCCAACCTCCTGGTAGGCGGCCGCATCCTCTCCATCCTCCACCTTGCCC
AGTGGCAGGCCCTCAACGAGGTGCTTGTGACGCGGAACGTTTCATCGCTT
ACTGCCGCAAAGGAGCAGCTTCGCGCTCTCATGCCCTGTCTGCAAGCTGC
CTTGGCTGGGGCGGGCAAGCACACCCTTGAGACCCTTTTGCCCGCAGGGG
ATGCCCAAGTTGGACTCCCCGCTCTATACGCTGCCCAATCAGGCGACGAC
AATAATGCCGATGTAGTCAGTGCCCGAGAGATAGGAGTTAAAGTGGGCAA
GGCCGTGCTATCATCTCGCAGCAACGACGGAGCCGCCACCGTCCTCCCTC
CCTACCTCGGCGCCAACTCCACGGCCGATGCCGGCAAATGGCGACCCACT
CCGCCCTTGTTTCTGCCGGGGGGCGCGGAGCAGTGGAGGTGGGTGACGCC
CTATATTCTGACCAGTCCGCAAGAGCTGCGCACTCCTCCCCCCCGGGCCT
CAGTACGGCCGCCTACAAGCAGGCATACTACGAGGTGAAATCGGTGGGCA
ACGCTACGTCCAAGGAACGGCTCTTGAAGGACACGGAGGGCGCGGTCTTC
TGGTGTGAGCAACCGGACGCTATCATCTTTGCGATAGTGGGCCGCGTCAC
GGAGAAGATGGACGTGCTGGAGGCCTCGCGCGTGTATGCTATGGCGGCCG
TGGCGGGATTAGACGCCCGGGTGGCCTCCATGGACAGCAAATACTTTTAC
AGCACCTGGCGGCCCGTGACGGCCCTGCCCCTCGGCAACGGTGGGATACT
GACGGCAGTGCCTGATTTCACCCCGCTGTTGGCTACCCCGCCTACGCCCG
AGTTTCCATCGGCCCACGCGGTGCACGGCGAGGCGATTATGGAGGTGCTG
CGGCAGGCGAGGGGGGGAGGGAAGGGTGATGAGGGGGCGGAGAAGGCGGC
CGACCAGCTGGACGTCAACTTGACGACACCCACGGTGAGAGGGTTGGAAG
CCGGGAAAAGAAGCTTGCAGGCAACAACTGCAGCACCTACAGCAGCAGAA
GCGGCGGATGTCATACCGGTGGTGACGAGGCAGTACAGCTCGCTGACTGC
AGTGAGTGAAGACCTAGCCTACTCCCGTATCTACGGCGGTATCCACTACC
GCTTTACGGCCGACAAAAGCTTGAAGCTGGGAACCAGCGTTGGGCAGCGG
GTTGTGGATGCCTTCGATGCTAAGTTCACGAAAGTGGGAATGATGGGAAA
GGAGCAGCAAAAGGAGGAGAGCAAGAAGGGGGAAGAGGGAGGGGAGGGGG
GCGCGAGGCGGGGTTTAAGGACAGGCAAAGTATCAGTATAA back to topCoding sequence (CDS) from alignment at chr10:1242149..1243689- >NO10G04130.1 ID=NO10G04130.1|Name=NO10G04130.1|organism=Nannochloropsis oceanica|type=CDS|length=1476bp|location=Sequence derived from alignment at chr10:1242149..1243689- (Nannochloropsis oceanica) ATGCCACCAGCACATCATTCTCCTTCCTCCATCCCTCGCCTCCTCGCGGT CCTCCTCCTCGCCCTTGCCCTTTTCCTCGAGACGCCAACCCCCACCATGG CCAACGAGCACCTCCATCCTTGGTCCGAGCTGGTGACGCAAGCCATGGTG GGCCATACCCTCCGCAATGGCGCCGAACCCAGCAAGCCCCTCAACCCCCT TGCCAACCTCCTGGTAGGCGGCCGCATCCTCTCCATCCTCCACCTTGCCC AGTGGCAGGCCCTCAACGAGGTGCTTGTGACGCGGAACGTTTCATCGCTT ACTGCCGCAAAGGAGCAGCTTCGCGCTCTCATGCCCTGTCTGCAAGCTGC CTTGGCTGGGGCGGGCAAGCACACCCTTGAGACCCTTTTGCCCGCAGGGG ATGCCCAAGTTGGACTCCCCGCTCTATACGCTGCCCAATCAGGCGACGAC AATAATGCCGATGTAGTCAGTGCCCGAGAGATAGGAGTTAAAGTGGGCAA GGCCGTGCTATCATCTCGCAGCAACGACGGAGCCGCCACCGTCCTCCCTC CCTACCTCGGCGCCAACTCCACGGCCGATGCCGGCAAATGGCGACCCACT CCGCCCTTGTTTCTGCCGGGGGGCGCGGAGCAGTGGAGTACGGCCGCCTA CAAGCAGGCATACTACGAGGTGAAATCGGTGGGCAACGCTACGTCCAAGG AACGGCTCTTGAAGGACACGGAGGGCGCGGTCTTCTGGTGTGAGCAACCG GACGCTATCATCTTTGCGATAGTGGGCCGCGTCACGGAGAAGATGGACGT GCTGGAGGCCTCGCGCGTGTATGCTATGGCGGCCGTGGCGGGATTAGACG CCCGGGTGGCCTCCATGGACAGCAAATACTTTTACAGCACCTGGCGGCCC GTGACGGCCCTGCCCCTCGGCAACGGTGGGATACTGACGGCAGTGCCTGA TTTCACCCCGCTGTTGGCTACCCCGCCTACGCCCGAGTTTCCATCGGCCC ACGCGGTGCACGGCGAGGCGATTATGGAGGTGCTGCGGCAGGCGAGGGGG GGAGGGAAGGGTGATGAGGGGGCGGAGAAGGCGGCCGACCAGCTGGACGT CAACTTGACGACACCCACGGTGAGAGGGTTGGAAGCCGGGAAAAGAAGCT TGCAGGCAACAACTGCAGCACCTACAGCAGCAGAAGCGGCGGATGTCATA CCGGTGGTGACGAGGCAGTACAGCTCGCTGACTGCAGTGAGTGAAGACCT AGCCTACTCCCGTATCTACGGCGGTATCCACTACCGCTTTACGGCCGACA AAAGCTTGAAGCTGGGAACCAGCGTTGGGCAGCGGGTTGTGGATGCCTTC GATGCTAAGTTCACGAAAGTGGGAATGATGGGAAAGGAGCAGCAAAAGGA GGAGAGCAAGAAGGGGGAAGAGGGAGGGGAGGGGGGCGCGAGGCGGGGTT TAAGGACAGGCAAAGTATCAGTATAA back to top
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