NO10G03970.1, NO10G03970.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G03970.1
Unique Name	NO10G03970.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2335
Alignment location	chr10:1177776..1183124 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:1177776..1183124 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G03970.1 vs.
Match: EWM25601.1 (histone-lysine n- h3 lysine-36 and h4 lysine-20 specific [Nannochloropsis gaditana])

HSP 1 Score: 244.6 bits (623), Expect = 8.800e-61
Identity = 130/207 (62.80%), Postives = 148/207 (71.50%), Query Frame = 0

Query:  470 KDGGNLLECDWDLRDKHLHCKKVYHEYCLNYAVSTNPNVRWHCPRHLCAACAEKKINFCCRYCPNSYCLAHVPALAHRITDQPKPRELAAPHLQEIVCPDCVRLVIRARYRQELKPGFCSVVDDI-----QHGYIDSLSQPRHWKEFG-------VRPFHSVLETRFVVEGHSLPWAVEEEEDDEEEKEEEEKEEEEEEEEEERQGG 665
            +DGGNLLECD DLRDK +HCKKVYHEYCLNY VSTNPNVRW+CPRHLCA C EK+I  CCRYCPNSYC  HVP LA  I +Q KPREL+   LQEI CPDCV LVIRAR+RQELK GFCSVVDDI       G I++   P   +E G       VRPFH VL+T FV EGH +PW      +D +++ EE KE E +EE EER+ G
Sbjct:    9 QDGGNLLECDHDLRDKSIHCKKVYHEYCLNYTVSTNPNVRWYCPRHLCAVCGEKRIRHCCRYCPNSYCQEHVPPLAFPIAEQLKPRELSHHQLQEISCPDCVCLVIRARFRQELKSGFCSVVDDILDHYLHFGQIETEGGPEGKEEVGKKRERARVRPFHPVLQTCFVAEGHEVPW-----NNDNDKEREEVKELERDEEREERKNG 210

The following BLAST results are available for this feature:

BLAST of NO10G03970.1 vs.

BLAST of NO10G03970.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25601.1	8.800e-61	62.80	histone-lysine n- h3 lysine-36 and h4 lysine-20 sp...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G03970	NO10G03970	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03970.1	NO10G03970.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03970.1.cds1	NO10G03970.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds2	NO10G03970.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds3	NO10G03970.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds4	NO10G03970.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds5	NO10G03970.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds6	NO10G03970.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds7	NO10G03970.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds8	NO10G03970.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds9	NO10G03970.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds10	NO10G03970.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds11	NO10G03970.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds12	NO10G03970.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds13	NO10G03970.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds14	NO10G03970.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds15	NO10G03970.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds16	NO10G03970.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds17	NO10G03970.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03970.1.cds18	NO10G03970.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:1177776..1183124+
coding sequence from alignment at chr10:1177776..1183124+

mRNA sequence

>NO10G03970.1 ID=NO10G03970.1|Name=NO10G03970.1|organism=Nannochloropsis oceanica|type=mRNA|length=2335bp
CTCCCTCCCCGCTCCCCGCGTCCCCCTCCCTCCGCCCAGCAATTCATCGT
TCATGTCCCATACGTCCTCTCTTTTCAAGACCCAGTCGAGTTTCGAATTT
TCAAGGGTGCTCTGCAGAAGATTCTGCATGAGATGCGCATTGTCCCCAAG
CAGATTGACGTCGCAACTCGTCTTCTGGGCCTGCTTCGAAGACGACAAGG
GGAGATGGAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACG
ACAAACACCAGCAACAGCGGCAAAGGTCACGGGGTGGGAAAGGAGGGGAA
GGGGGAAGAGGGATGACACTATCGTTCCCGCCGCTCATTTCCTCGCCGTC
GCCGGGGGGAGGAGGAAAGACGGCAGCATCGGCAAGAAGAACGGGCGATC
GGCACTCAAAATGGCGCCCGAGCGACCCTCAGGACATGCGAGGCCCCTCC
GTCGTCTACAGGAATGGACGCAGGGACAAGCCTCACGGTGGCCCCTATTC
CGACCAGCACTGCTTCTTCTGCAGGGACGGCAGCGTTCCCCTCAAGCATC
ATGCCACGGTGCCCCGCCTCGGCGATGGCCGCTCACTCCTCCTCTGCCAA
GCGTGCCGTAACGGCTGCTATGCTCGCCGTTACCAGTCCTACTACCGCCT
CACCCTCTACGACGCAAGAGACCAGCACGAGACCATCTGCGCCATCTGCT
CCAAGAGCTACGGGAGCACACCCGTCACACTCGTGCTGTGTGACGGCTGT
CGTTTCTCCTACTGCATGCCTTGCCTCCGTACCGTCCTGTCCCCTGCCGA
ATGTCGAGAGCTGGAGCGGGAGGGCGCCGAGTGGACTTGTCCCGTCTGCC
GCCATAGCGTGCCTCGCCTCTGCCCCGACACCGAAGAAAATGTCCCTCAC
TCATCCGACGGCTCGCACTCCCTCGTCTGGCTTAACAGATGGACGAAGCT
TCCTGGGAAGCCTCCGAGCGCCCGGATGCGCCCGCTCTCTACCTCCCTTG
CGACAGGAGATGGAGGAGGGGGAGGAGGGAGGGGGGAGGGGTCGTTGTTG
ACGGAGGGGGAGGACCTGGTCGAAGAGGAGGAGGAGGAGGAGGAGGAGGA
TCAGGAGGAGGAGGAGGAGGAGAGGAGGCTGTGGCCGCCATCGAAGGGCG
AGTGGGCGGAGGTGCCGCCTGGGGCCCGCCTAACGCTGGAGGATCTCGGG
GTGGGCGTAGGCAAGGAGTGGGACAAAGTGATCGGTCGCAAGGCCGACGG
CAGCTTCCTGTTTAAGGATGAGGGCGAGTTCGATGCGGAGATGGAGAAGG
AGGAGCCCCCGCCCTCCCTCCCTTCCCCTACGGTCAAGCGCAAAAGACCT
GAGGGCCAGCAGCCCGAGGAAGGGGGAGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGCTCTGTGGTCGTCGCTTCCGCCTGTTGACGTCTCGAAAG
ACCATCTAGACTTCTTCGGTCAATACGTTCGGTATATAAAGGACTTGAGC
ATCCCTAACAAGGACACAGAGAACAGCTGCTTCCTCTGCAAAGACGGGGG
CAACCTGCTGGAATGCGATTGGGACCTCCGCGACAAGCACTTGCACTGCA
AAAAGGTATACCATGAGTACTGCCTTAATTACGCCGTTTCGACCAACCCA
AACGTCCGGTGGCACTGTCCGAGGCACCTGTGTGCTGCCTGCGCGGAGAA
AAAAATCAACTTCTGCTGTCGGTACTGTCCCAATAGCTATTGTCTTGCAC
ACGTCCCCGCCCTCGCCCACCGCATCACTGACCAGCCCAAGCCCCGCGAA
CTGGCCGCCCCGCATCTGCAAGAGATCGTTTGTCCCGACTGCGTACGCCT
CGTTATCCGGGCACGGTATCGCCAGGAGCTCAAACCCGGTTTCTGTTCAG
TGGTCGACGACATCCAACACGGTTACATTGATAGCCTCAGTCAACCCCGA
CATTGGAAGGAATTCGGTGTGCGTCCGTTCCACTCCGTGTTGGAGACACG
GTTTGTCGTTGAGGGTCATAGCTTACCGTGGGCTGTAGAGGAGGAGGAGG
ACGACGAGGAGGAGAAGGAAGAGGAGGAGAAGGAGGAGGAGGAGGAGGAG
GAGGAAGAAGAGCGGCAGGGAGGAATGCGCAGTCGGGAGTGAGGGAGGAT
GCGAGGGGTAGGAGGGGGGGTGGGCATCAAAAGTACATATGACAGGTAAA
CGGATGCATATGTTGATTATGTTGAAATTAAATGGATTCAAAAAAGTAAA
TAATTAAAGAGGGTGGGATTGTGCGCTTGTGCTTGTTGGCACCAGTGTGT
GAGAGGGGGAAGTGATTTTTTTTTTGAACGCTTCA

protein sequence of NO10G03970.1

>NO10G03970.1-protein ID=NO10G03970.1-protein|Name=NO10G03970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=670bp
MRIVPKQIDVATRLLGLLRRRQGEMEQQQQQQQQQQQQYDKHQQQRQRSR
GGKGGEGGRGMTLSFPPLISSPSPGGGGKTAASARRTGDRHSKWRPSDPQ
DMRGPSVVYRNGRRDKPHGGPYSDQHCFFCRDGSVPLKHHATVPRLGDGR
SLLLCQACRNGCYARRYQSYYRLTLYDARDQHETICAICSKSYGSTPVTL
VLCDGCRFSYCMPCLRTVLSPAECRELEREGAEWTCPVCRHSVPRLCPDT
EENVPHSSDGSHSLVWLNRWTKLPGKPPSARMRPLSTSLATGDGGGGGGR
GEGSLLTEGEDLVEEEEEEEEEDQEEEEEERRLWPPSKGEWAEVPPGARL
TLEDLGVGVGKEWDKVIGRKADGSFLFKDEGEFDAEMEKEEPPPSLPSPT
VKRKRPEGQQPEEGGEEEEEEEEEEEALWSSLPPVDVSKDHLDFFGQYVR
YIKDLSIPNKDTENSCFLCKDGGNLLECDWDLRDKHLHCKKVYHEYCLNY
AVSTNPNVRWHCPRHLCAACAEKKINFCCRYCPNSYCLAHVPALAHRITD
QPKPRELAAPHLQEIVCPDCVRLVIRARYRQELKPGFCSVVDDIQHGYID
SLSQPRHWKEFGVRPFHSVLETRFVVEGHSLPWAVEEEEDDEEEKEEEEK
EEEEEEEEEERQGGMRSRE*

mRNA from alignment at chr10:1177776..1183124+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G03970.1 ID=NO10G03970.1|Name=NO10G03970.1|organism=Nannochloropsis oceanica|type=mRNA|length=5349bp|location=Sequence derived from alignment at chr10:1177776..1183124+ (Nannochloropsis oceanica)
CTCCCTCCCCGCTCCCCGCGTCCCCCTCCCTCCGCCCAGCAATTCATCGT
TCATGTCCCATACGTCCTCTCTTTTCAAGACCCAGTCGAGTTTCGAATTT
TCAAGGTAAAAGAGGAGTGTCGGAGGGAGTGAGGGAGAGAGGGAGGGAGG
AGGGTTGGGAAGGCAGGATAGTGAAATTCATCTTCTCTATATCTTATTTT
TCCTTCCCTCCCTCCCTCCCCTCCCTCCCTCCCTCATTCCTTTCAGGGTG
CTCTGCAGAAGATTCTGCATGAGATGCGCATTGTCCCCAAGCAGGTATGT
CTACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTGCCGCTCTCTTTCTCACACCCCGCGATCT
GCTGCTGCGCTCACTCTCCCCTCCCTCCCTCCCTCCCTCCCTCAGATTGA
CGTCGCAACTCGTCTTCTGGGCCTGCTTCGAAGACGACAAGGGGAGATGG
AACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACGACAAACAC
CAGCAACAGCGGCAAAGGTCACGGGGTGGGAAAGGAGGGGAAGGGGGAAG
AGGGATGACACTATCGTTCCCGCCGCTCATTTCCTCGCCGTCGCCGGGGG
GAGGAGGAAAGACGGCAGCATCGGCAAGAAGAACGGGCGATCGGGTAAGT
ATATTATTTAGTCTGATTAGAGGAATAGATTAGTGTTGATGATATTGGAT
TAGTATTCATGATAGTAGATAAGTATTCATAAAACTAGATGAGCATTCAG
AATACTATATTGGTATTCAGAACCTTAGATGAGTGTTGAAAATGTTAAAC
TGCTTACATCGAGAGAAGGGAGACGAGCGCCTCGAAACCCACGTACTTCT
CCCTCCCTCCCTCCCACCCTCCCAGCACTCAAAATGGCGCCCGAGCGACC
CTCAGGACATGCGAGGCCCCTCCGTCGTCTACAGGAATGGACGCAGGGTG
AGGAAGCGGAGGGAGGGAGGGAGGAAAGGAGGAAAGGAGAAAGGGAGGGA
GGGAGGGACGGACAGTGAATGGATGGGCCAGACTCTTTTACTCCTTCCCC
CCCCCCCTCCTTCGAGCCTCGTTAATCACCCGCTGCCCTCCCTCCCTTTC
TCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTGCAGGACAAGCCTC
ACGGTGGCCCCTATTCCGACCAGCACTGCTTCTTCTGCAGGGACGGCAGC
GTTCCCCTCAAGGTACAGCAGCCCTCCCTCCCTCCCTCCCTCCCTCCTTC
CGTCCTTCTGTCTCTTTCCTCTCCTTCTTCCGTCTTTCTCCTCCCCACCC
GCTTGTCTGCCCTTTGTCCTTCTTTCCTTTGACCAGCATCATGCCACGGT
GCCCCGCCTCGGCGATGGCCGCTCACTCCTCCTCTGCCAAGCGTGCCGTA
ACGGCTGCTATGCTCGCCGTTACCAGTCCTACTACCGCCTCACCCTCTAC
GACGCAAGAGACCAGCACGAGGTACCTCCCCTCACCCCTCCCTCCCTCCC
TCCCTCCCTCTTTCCCTCACGTCCTCATCTGCGCCATCTGCTGCAAGAGC
TACGGCATCACATCGGTGACCCTCCTCCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCAGACCATCTGCGCCATCTGCTCCAAGAGCTACGGGAGCACACCC
GTCACACTCGTGCTGTGTGACGGCTGTCGTTTCTCCTACTGCATGCCTTG
CCTCCGTACCGTCCTGTCCCCTGCCGAAGTACGCAGCGAGGGAGAAAGGG
AGGGAGGGAGGGAGGGAGGGAGAAATTTGAGGCCTGGTTCCATCCATGCC
GCACTCCAGTTAAGTATTCTCACTAATCCTCCCTCCCCTTCCCTCCCTCC
CTCCCTCCCCTTCCCTCCCTCCCTCCCCTGAGCAGTGTCGAGAGCTGGAG
CGGGAGGGCGCCGAGTGGACTTGTCCCGTCTGCCGCCATAGCGTGCCTCG
CCTCTGGTGCGCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTTAT
CGCGTAGTCTTCTCAACCCTCCCTCCCTCCGCTCCCTTTACCCCTCCCTC
TCTTCCTCCCTCCATCCCTCCAGCCCCGACACCGAAGAAAATGTCCCTCA
CTCATCCGACGGCTCGCACTCCCTCGTCTGGCTTAACAGGTAAGCCCTCC
CTCCCTCCCTCCCTCCCTCTTCTCTCATCTTTCCCTCCCTCCCGCCTTTC
CTCTTACCCTCCTATTCCTTCCTTCCTTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTAGATGGACGAAGCTTCCTGGGAAGCCTC
CGAGCGCCCGGATGCGCCCGCTCTCTACCTCCCTTGCGACAGGAGATGGA
GGAGGGGGAGGAGGGAGGGGGGAGGGGTCGTTGTTGACGGAGGGGGAGGA
CCTGGTCGAAGAGGAGGAGGAGGAGGAGGAGGAGGATCAGGAGGAGGAGG
AGGAGGAGAGGAGGCTGTGGCCGCCATCGAAGGGCGAGTGGGTAAGAGCA
ATCGATGACGGTGAAGAAGACAGGAGGGCAATAGCCCTCTTTCCCTTCTC
TCCTTCCCTTCCTCCTTCCCTTCCTCCTTCCCTTCCTCCTTCCCTTCCTC
GCTCTTTTGAACCCACATACCACTCACGCACACCCGGCGAATAAGCCTCA
CCTCCCGTCCCTCCCTCCCCTCTCCCTCCCTCCCTCCTCCCTCAGGCGGA
GGTGCCGCCTGGGGCCCGCCTAACGCTGGAGGATCTCGGGGTGGGCGTAG
GCAAGGAGTGGGACAAAGTGGTGCGGAGGGAGGGAGGGAGGGAGGGAGAT
TAAGAGAAAGAGATTATCAATCACATCCTTTGGATTCCGTACCAGGCGGT
TTTTGCTTCTCTTTCTCTGATTTATCCTTCATGGCTTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCTTCCCCTTCCCAGATCGGTCGCAAGGCCG
ACGGCAGCTTCCTGTTTAAGGATGAGGGCGAGTTCGATGCGGAGATGGAG
AAGGAGGAGCCCCCGCCCTCCCTCCCTTCCCCTACGGTCAAGCGCAAAAG
GTGCGTGGAATGGGTGAATCCATGCCCGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGACATGCTGAAGACTTCAGGG
CGAATAAACCGTCGTGCATCCCTTCGTGCTCTCGCTCCCTTTCTCTCTCT
CTTTTCTGCAGTTACGTATAATTATGTATCTATATATATCTGATACATCT
GTATTGACCTTCCTCCACAGACCTGAGGGCCAGCAGCCCGAGGAAGGGGG
AGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCTCTGTGGTCGTCGC
TTCCGCCTGTTGACGTCTCGAAAGACCATCTAGACTTCTTCGGTCAATAC
GTTCGGTGAGACCCTCGTCTTCCCTCCCTTCCTCCCCCCCTTCCTCCCCT
CCTCCCTTTCTCCCGGCATTCCTCGCTCCCTCCCTCCCTCTTCTGACATG
TCCATCCTCCTTTCTCCTACCCCTCCCTGAATCGCTTCCTCTTCAGGTAT
ATAAAGGACTTGAGCATCCCTAACAAGGACACAGAGAACAGCTGCTTCCT
CTGCAAAGTGCGTATCCAGTCCCGCCCTCCCTCCCTCCCTGCCTCCCTGC
CTCCTTTTCTCCGTCCCCTCCTACCCCTCGACTTTTCCCTCCCTCCCTCC
CTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCAACAGGATGGGGGCAACTC
ATTCACTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAA
CAGGACGGGGGCAACCTGCTGGAATGCGATTGGGACCTCCGCGACAAGCA
CTTGCACTGCAAAAAGGTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCATTCCCTCC
CTTCTTCCCTCCCTCCCGCCACGTCATCGACCCTCCCTCCCTCTCTCCCT
CCCTTCATCCCTAGGTATACCATGAGTACTGCCTTAATTACGCCGTTTCG
ACCAACCCAAACGTCCGGTGGCACTGTCCGAGGCACCTGTGTGCTGCCTG
CGCGGAGAAAAAAATCAACTTCTGCTGTCGGTAAGCACTCACGAGGGACA
GGAGAGAAAAAAAAGAGGAAGAGGAGGAGGACAACGAAGAGCAGAGGGAT
AGTGCTGCGAGTGATAAAGACAACGATCGAGGCCCCTGACTATCTTCCTT
CTTTGCTCCCTCCCTCCCTCCCTCCTTCACTCCCTCTCTCCCTTGCCCTC
TCCAGGTACTGTCCCAATAGCTATTGTCTTGCACACGTCCCCGCCCTCGC
CCACCGCATCACTGACCAGCCCAAGCCCCGCGAACGTACGTCCTCTTACC
CCGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCTCTTCCCTC
CCCTTGTTCTTTCAAAGGCCTTTCATCAACATCATCCTTCTTTTTTTCCA
TGACGTCCTTTTTCCCCTCTCGTCCTTCCTCCCTCCCTCACTCCCTCGCC
CATCCAGTGGCCGCCCCGCATCTGCAAGAGATCGTTTGTCCCGACTGCGT
ACGCCTCGTTATCCGGGCACGGTATCGCCAGGTATATATATGTATTTTCT
GCTCCTCCTTTTATCCCTTCTTCCTCTTATCATGATTCTTTTCCCCGTCA
GCATTTCTCCTTCCGTCTCGTCCGCATTCAAGTCCCTTCGTCTCCTTCAC
CTGCGTTTTACTCCCTCCTGACTCTTTCTCGCGTTATCCTCTTCTCCTCA
CCTCTTTCCCTTCCTTTCCCCCTTACCTCGCAAATGTAGGAGCTCAAACC
CGGTTTCTGTTCAGTGGTCGACGACATCCAACACGGTTACATTGATAGCC
TCAGTCAACCCCGACATTGGAAGGAATTCGGTGTGCGTCCGTTCCACTCC
GTGTTGGAGACACGGTTTGTCGTTGAGGGTCATAGCTTACCGTGGGCTGT
AGAGGAGGAGGAGGACGACGAGGAGGAGAAGGAAGAGGAGGAGAAGGAGG
AGGAGGAGGAGGAGGAGGAAGAAGAGCGGCAGGGAGGAATGCGCAGTCGG
GAGTGAGGGAGGATGCGAGGGGTAGGAGGGGGGGTGGGCATCAAAAGTAC
ATATGACAGGTAAACGGATGCATATGTTGATTATGTTGAAATTAAATGGA
TTCAAAAAAGTAAATAATTAAAGAGGGTGGGATTGTGCGCTTGTGCTTGT
TGGCACCAGTGTGTGAGAGGGGGAAGTGATTTTTTTTTTGAACGCTTCA

Coding sequence (CDS) from alignment at chr10:1177776..1183124+

>NO10G03970.1 ID=NO10G03970.1|Name=NO10G03970.1|organism=Nannochloropsis oceanica|type=CDS|length=2010bp|location=Sequence derived from alignment at chr10:1177776..1183124+ (Nannochloropsis oceanica)
ATGCGCATTGTCCCCAAGCAGATTGACGTCGCAACTCGTCTTCTGGGCCT
GCTTCGAAGACGACAAGGGGAGATGGAACAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGTACGACAAACACCAGCAACAGCGGCAAAGGTCACGG
GGTGGGAAAGGAGGGGAAGGGGGAAGAGGGATGACACTATCGTTCCCGCC
GCTCATTTCCTCGCCGTCGCCGGGGGGAGGAGGAAAGACGGCAGCATCGG
CAAGAAGAACGGGCGATCGGCACTCAAAATGGCGCCCGAGCGACCCTCAG
GACATGCGAGGCCCCTCCGTCGTCTACAGGAATGGACGCAGGGACAAGCC
TCACGGTGGCCCCTATTCCGACCAGCACTGCTTCTTCTGCAGGGACGGCA
GCGTTCCCCTCAAGCATCATGCCACGGTGCCCCGCCTCGGCGATGGCCGC
TCACTCCTCCTCTGCCAAGCGTGCCGTAACGGCTGCTATGCTCGCCGTTA
CCAGTCCTACTACCGCCTCACCCTCTACGACGCAAGAGACCAGCACGAGA
CCATCTGCGCCATCTGCTCCAAGAGCTACGGGAGCACACCCGTCACACTC
GTGCTGTGTGACGGCTGTCGTTTCTCCTACTGCATGCCTTGCCTCCGTAC
CGTCCTGTCCCCTGCCGAATGTCGAGAGCTGGAGCGGGAGGGCGCCGAGT
GGACTTGTCCCGTCTGCCGCCATAGCGTGCCTCGCCTCTGCCCCGACACC
GAAGAAAATGTCCCTCACTCATCCGACGGCTCGCACTCCCTCGTCTGGCT
TAACAGATGGACGAAGCTTCCTGGGAAGCCTCCGAGCGCCCGGATGCGCC
CGCTCTCTACCTCCCTTGCGACAGGAGATGGAGGAGGGGGAGGAGGGAGG
GGGGAGGGGTCGTTGTTGACGGAGGGGGAGGACCTGGTCGAAGAGGAGGA
GGAGGAGGAGGAGGAGGATCAGGAGGAGGAGGAGGAGGAGAGGAGGCTGT
GGCCGCCATCGAAGGGCGAGTGGGCGGAGGTGCCGCCTGGGGCCCGCCTA
ACGCTGGAGGATCTCGGGGTGGGCGTAGGCAAGGAGTGGGACAAAGTGAT
CGGTCGCAAGGCCGACGGCAGCTTCCTGTTTAAGGATGAGGGCGAGTTCG
ATGCGGAGATGGAGAAGGAGGAGCCCCCGCCCTCCCTCCCTTCCCCTACG
GTCAAGCGCAAAAGACCTGAGGGCCAGCAGCCCGAGGAAGGGGGAGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGCTCTGTGGTCGTCGCTTCCGC
CTGTTGACGTCTCGAAAGACCATCTAGACTTCTTCGGTCAATACGTTCGG
TATATAAAGGACTTGAGCATCCCTAACAAGGACACAGAGAACAGCTGCTT
CCTCTGCAAAGACGGGGGCAACCTGCTGGAATGCGATTGGGACCTCCGCG
ACAAGCACTTGCACTGCAAAAAGGTATACCATGAGTACTGCCTTAATTAC
GCCGTTTCGACCAACCCAAACGTCCGGTGGCACTGTCCGAGGCACCTGTG
TGCTGCCTGCGCGGAGAAAAAAATCAACTTCTGCTGTCGGTACTGTCCCA
ATAGCTATTGTCTTGCACACGTCCCCGCCCTCGCCCACCGCATCACTGAC
CAGCCCAAGCCCCGCGAACTGGCCGCCCCGCATCTGCAAGAGATCGTTTG
TCCCGACTGCGTACGCCTCGTTATCCGGGCACGGTATCGCCAGGAGCTCA
AACCCGGTTTCTGTTCAGTGGTCGACGACATCCAACACGGTTACATTGAT
AGCCTCAGTCAACCCCGACATTGGAAGGAATTCGGTGTGCGTCCGTTCCA
CTCCGTGTTGGAGACACGGTTTGTCGTTGAGGGTCATAGCTTACCGTGGG
CTGTAGAGGAGGAGGAGGACGACGAGGAGGAGAAGGAAGAGGAGGAGAAG
GAGGAGGAGGAGGAGGAGGAGGAAGAAGAGCGGCAGGGAGGAATGCGCAG
TCGGGAGTGA

Synonyms

Publications