NO10G03820.1, NO10G03820.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G03820.1
Unique Name	NO10G03820.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2743
Alignment location	chr10:1108604..1113798 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:1108604..1113798 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G03820.1 vs.
Match: EWM25576.1 (ca2 :cation antiporter family, partial [Nannochloropsis gaditana])

HSP 1 Score: 428.3 bits (1100), Expect = 4.400e-116
Identity = 276/412 (66.99%), Postives = 302/412 (73.30%), Query Frame = 0

Query:  281 EMVIGVQALAQGEIRVVQASMLGSILSNLLLVTGSCFLVGGILHKEQRFNPVASVANLSLLFLASLALVIPTPIGHSYKLSQAHILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGEEVEEEEEEEDGSEDGSEDGSEGEGGKRRAEEEKEATELEEGKRLSSNGVANSVVNGASHPPHAAAAVAAANGTHHK---SKSRSTCSNHHHHHQQQQQRQAEQHQH-QHQHRHYME------DEDEDENGDGVDLGLWGSMAGLLIVAVIVCIFSDLVVSSIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAVGSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLNAQSNWLLGSLLITAYCFCGFAFFFEKPPLPGQ 683
            EMVIGVQAL+ GEIRVVQAS+LGSILSNLLL+TGSCFLVGGI+HKEQRFN +A VANLSLLFLA LALVIPTPIGH+YKLS+AHILLISRVAAF LLSMYLQLIVFQLVTHKHLF+G  +   E EEEED          EG  GK R         ++ G RLS   +    +  +  PP                  S S       H  H       A    H QH H    +      +E +D + D VDLGLWGSMAGLL+VA+IV  FS+LVV+SIDGMS  YG+SKTFVGVILLPLVGNATEHMTAVTVA KNRMELAMGIAVGSSTQIAL VIP LTLAGWALGQ+MTLEFPPIEII LIMS+IVVQPVLLNAQSNWLLGSLLITAY FCGFAFFFEKPPLPG+
Sbjct:    3 EMVIGVQALSHGEIRVVQASLLGSILSNLLLITGSCFLVGGIIHKEQRFNSMAGVANLSLLFLACLALVIPTPIGHTYKLSKAHILLISRVAAFFLLSMYLQLIVFQLVTHKHLFEGEHQGGGEGEEEED---------VEGGNGKVRV--------IQAGYRLSIQLILPPSLLPSLPPPSLPPQTVLTLNVEPAFPPSLSGLPAEPFHCPHHTHYVCDAVGLSHSQHTHSGSCDAAAGTLEEVDDGDEDHVDLGLWGSMAGLLVVALIVSFFSNLVVTSIDGMSDAYGMSKTFVGVILLPLVGNATEHMTAVTVAAKNRMELAMGIAVGSSTQIALLVIPSLTLAGWALGQDMTLEFPPIEIIALIMSLIVVQPVLLNAQSNWLLGSLLITAYGFCGFAFFFEKPPLPGE 397

The following BLAST results are available for this feature:

BLAST of NO10G03820.1 vs.

BLAST of NO10G03820.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25576.1	4.400e-116	66.99	ca2 :cation antiporter family, partial [Nannochlor...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G03820	NO10G03820	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03820.1	NO10G03820.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03820.1.cds1	NO10G03820.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03820.1.cds2	NO10G03820.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03820.1.cds3	NO10G03820.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03820.1.cds4	NO10G03820.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03820.1.cds5	NO10G03820.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03820.1.cds6	NO10G03820.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03820.1.cds7	NO10G03820.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03820.1.cds8	NO10G03820.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03820.1.cds9	NO10G03820.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03820.1.cds10	NO10G03820.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03820.1.cds11	NO10G03820.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03820.1.cds12	NO10G03820.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:1108604..1113798-
coding sequence from alignment at chr10:1108604..1113798-

mRNA sequence

>NO10G03820.1 ID=NO10G03820.1|Name=NO10G03820.1|organism=Nannochloropsis oceanica|type=mRNA|length=2743bp
ACAGTTTACGACGATACCGGGCGCTGGACTTTTTAAAGCCTGGCTTGATC
TCTTCAAGATCATTCCGTTCAAGCGGCACGCAGCAAGGTCATCCGCTGCG
CAGCTCTGGAGCGCATAGGCACGACGAAGGAGAGCGAGAGCCACGACAAC
GACCAGGACAAGGACAATAACGTCAAACGCAAAGCAAGTGAGAAGATGCC
GAACGGTGTAGGTGTGCGAACGGAGCTAGCGCCTATCCCTCCCACCCGTC
CAAGCCCAGCCCAGCCCATGCGCGAGGGTACCACGAGCGACTCTTTGCTG
GACCGCAGTGGAAATGGACGGGACAGGAGCCAGAAAGGCGGCCATCGGAG
GTCGCTTTCTGCCGGAGAGCCTCTTCCGCGGCAATCCAGTATTGAGTCGT
TAGGGGAGAGCTCCACCACGCCTAGAAACTCCAAAGTGGCCTTGGGCCAC
TCTCTCCTCACCGAGGCGCGTCGTTTCATCAAGAAGAAGCCTGCACCTAT
CAAGAGGAGGTGGGAGATCATCCGTGATTCCCTCGTCGGGCCCGAGGGCA
CATCCCTCCTCTCCCGCTTGTCGGGCCGATATGGGAACATTAAGGACCTC
TTGCATGATGATATGGCGGAGGGGGAGGAAGGAAGGATGGCTTCCGGCGA
TGGGCGAGGGTATGGCACACTAGAGGATGGAGTGGAGATCAAAAGACGCG
ACTCGCGGGGGAGGAATGACGTCATGCACAGCAGTGTCAATGAGGGCGTG
AAGGGAAACGGGATGAGCCCCGGCGAGAAGAAGCATAAAAAGCCCTTCTT
GTGCAGGACCCTGCGACATGTCCTCTTCTGCCGATACCTGAATGTCCTCA
TGCTCTTCCTCCCCCTCGGCCTCCTCTCGAACGTCTTCCAATGGGGCGCC
GGCCCCACCTTCATCTTCAACTTCCTGGGCCTGATTCCCCTGGCTGCCAT
CCTGGGCGACTTCACGGAGGAGGTGGCGGAGCATTTAGGGGACACTATTG
GAGGGCTCGTCAACGCCAGCTTCGGGAACCTGATGGAGATGGTGATAGGC
GTGCAGGCGTTGGCCCAGGGGGAGATCCGGGTAGTCCAAGCCTCCATGCT
CGGCTCCATCTTGTCGAACCTCCTCCTCGTTACAGGCTCCTGCTTCCTCG
TCGGTGGTATCCTGCACAAGGAGCAGCGGTTTAATCCTGTGGCCAGCGTG
GCCAACCTGTCCTTGCTCTTCCTCGCATCCTTGGCACTGGTGATCCCCAC
GCCTATCGGGCACTCGTATAAACTCAGTCAAGCGCATATTTTGCTCATCT
CCCGCGTAGCTGCCTTTTGCCTCCTTTCGATGTATCTGCAACTGATTGTG
TTCCAGCTCGTTACTCACAAACACTTGTTCGACGGTCACGGGGAGGAGGT
AGAGGAGGAAGAGGAGGAGGAGGACGGAAGCGAGGACGGAAGCGAGGACG
GAAGCGAGGGAGAGGGGGGCAAGAGGAGAGCGGAGGAAGAGAAGGAAGCA
ACAGAACTAGAAGAGGGCAAGCGTCTATCTTCGAATGGAGTCGCAAATTC
TGTTGTAAACGGTGCTTCTCACCCTCCTCATGCTGCTGCAGCAGTAGCAG
CAGCCAACGGCACACACCACAAGAGCAAGAGCAGAAGCACGTGCAGCAAT
CACCACCACCACCATCAACAGCAGCAGCAGCGACAGGCAGAGCAGCACCA
GCACCAGCACCAGCACCGGCACTACATGGAGGACGAGGACGAGGACGAGA
ACGGCGACGGAGTGGACTTGGGGCTTTGGGGCTCGATGGCAGGCCTTCTA
ATCGTCGCTGTAATCGTATGCATTTTTTCGGACCTGGTCGTTTCGTCTAT
CGATGGGATGAGCGCGGAGTACGGCGTCAGCAAGACATTCGTGGGAGTGA
TTTTGTTGCCACTGGTGGGCAATGCCACGGAGCATATGACGGCGGTGACA
GTCGCAGTCAAGAACAGGATGGAGCTGGCCATGGGCATCGCTGTCGGTAG
CTCCACACAGATCGCCCTCTTCGTCATTCCTGTCCTTACCCTGGCAGGGT
GGGCCTTAGGGCAAAACATGACATTAGAGTTTCCACCAATTGAGATAATC
ACCCTCATTATGAGCATCATTGTCGTGCAGCCTGTCTTATTAAATGCCCA
GTCGAACTGGCTGCTGGGATCGCTCCTCATCACAGCCTACTGCTTCTGTG
GCTTTGCCTTCTTTTTCGAGAAGCCACCGCTGCCTGGACAGTGAGGAGCG
AGGAGAGGGAGGAGAAGGGAGGGCGTGGAGAAAGAAAGGGGGTGGAGAGA
CAGGAGGTATGCCATGGTATGTACAGTAAGGGCAGGAAATAAACAGAGGC
TTGTATGTGCCGAAGAAAATTGGAATAGAAAAAATAACAGAATAGAAAGA
GGGAAACAACTGACACGACCAAGGGAGATGTGGAAAGGGAGAATGCGGGG
GAGGGGATAAACGTGGTTTTCGAAGTGGGAAAACCCTGGGTATTATTTGA
AAAGCAAGAGTATTGAAAAGAACTGCATGATATCGCGCTGGTCTGTAGAA
ATTGCAAAGGGAAAGAAGGGAGACCCATGTCGGATTTTGGTGAGGCTTGA
TTTAGTGGGCGAGAATCGCTTGTACCTGTCTGCTGCGCTCCGCATTTTTG
GAGAAACTTGTTTCCCCTCCTTGAAAAGAAAAGATGATCGAGCCTTGCGG
TGCCGAAGAACAGCGACAGGGATACGATGCGGACGAAGGAGCG

protein sequence of NO10G03820.1

>NO10G03820.1-protein ID=NO10G03820.1-protein|Name=NO10G03820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=683bp
MPNGVGVRTELAPIPPTRPSPAQPMREGTTSDSLLDRSGNGRDRSQKGGH
RRSLSAGEPLPRQSSIESLGESSTTPRNSKVALGHSLLTEARRFIKKKPA
PIKRRWEIIRDSLVGPEGTSLLSRLSGRYGNIKDLLHDDMAEGEEGRMAS
GDGRGYGTLEDGVEIKRRDSRGRNDVMHSSVNEGVKGNGMSPGEKKHKKP
FLCRTLRHVLFCRYLNVLMLFLPLGLLSNVFQWGAGPTFIFNFLGLIPLA
AILGDFTEEVAEHLGDTIGGLVNASFGNLMEMVIGVQALAQGEIRVVQAS
MLGSILSNLLLVTGSCFLVGGILHKEQRFNPVASVANLSLLFLASLALVI
PTPIGHSYKLSQAHILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGE
EVEEEEEEEDGSEDGSEDGSEGEGGKRRAEEEKEATELEEGKRLSSNGVA
NSVVNGASHPPHAAAAVAAANGTHHKSKSRSTCSNHHHHHQQQQQRQAEQ
HQHQHQHRHYMEDEDEDENGDGVDLGLWGSMAGLLIVAVIVCIFSDLVVS
SIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAV
GSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLN
AQSNWLLGSLLITAYCFCGFAFFFEKPPLPGQ*

mRNA from alignment at chr10:1108604..1113798-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G03820.1 ID=NO10G03820.1|Name=NO10G03820.1|organism=Nannochloropsis oceanica|type=mRNA|length=5195bp|location=Sequence derived from alignment at chr10:1108604..1113798- (Nannochloropsis oceanica)
ACAGTTTACGACGATACCGGGCGCTGGACTTTTTAAAGCCTGGCTTGATC
TCTTCAAGATCATTCCGTTCAAGCGGCACGCAGCAAGGTCATCCGCTGCG
CAGCTCTGGAGCGCATAGGCACGACGAAGGAGAGCGAGAGCCACGACAAC
GACCAGGACAAGGACAATAACGTCAAACGCAAAGCAAGTGAGAAGATGCC
GAACGGTGTAGGTGTGCGAACGGAGCTAGCGCCTATCCCTCCCACCCGTC
CAAGCCCAGCCCAGCCCATGCGCGAGGGTACCACGAGCGACTCTTTGCTG
GACCGCAGTGGAAATGGACGGGACAGGTACGGCATGGGGAGATGGGAGAG
GAGAGGAAAGGACAACTGGAAGGATGGCTTGTAGGGGGGATAAAGAGTGA
TTGGCAAGCAGGGTAGGGTAGAGATAGGCATAAGCGTTGACGCCATCTTG
ACAAGAAGCAGGCCAGCAAAGCGACGAGCACTCCTATGAATGGACCGGAC
AGCACACGGCACATCCATGACGCTACTTGCCTTAGTCAAGTCTGTCACAG
AAACATGGTTGAGCTTGACACCCCTACCTCCCTCCCTCCCTCCCTCCGCT
ACCTCGCCGGCCCCCTTCCCCAGGAGCCAGAAAGGCGGCCATCGGAGGTC
GCTTTCTGCCGGAGAGCCTCTTCCGCGGCAATCCAGTATTGAGTCGTTAG
GGGAGAGCTCCACCACGCCTAGAAACTCCAAAGTGGCCTTGGTAGGGAGG
GAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAAGGCAGTTGGGGGGAT
TTTCCTCGCGTCTTGTGAAGCTGGTTGTCGTAAGAGTCGTGGACAGACTG
ACTGAATTTGGAAGGCCTTGGATCGTCTTGGGACGGAGGGAGGGAGGGAG
GGGCAGAGGGAGGGGCGGAGGGAGGGACGTAGGGAAGGCGAGCAGTCCAC
CATTTCTCGTGGGTAATCATGACGGCTTTATTGGCTTACCTAATCCATCC
ATCCCCATCATCCATCCATCCATCCCTCCCTCCCTCCCTTTTTCTTCCCA
GGGCCACTCTCTCCTCACCGAGGCGCGTCGTTTCATCAAGAAGAAGCCTG
CACCTATCAAGAGGAGGTGGGAGATCATCCGTGATGTGAGTCAAGGAGGA
GGGGCAGAGGGAGGGGGGGAGGGAGTGGGGGAGGAAGGGGCGGGTCCCCT
TGATATTCTTCTTGTATGTATCGTCAGCCAACATAGCCCCTGCGCTCACT
CGCCCATCCCTCTCTCCTTCCTTCCTTCCCTCTCTCTCTCCCTCCCTCTC
TCCCTCCCTTCCTTTCTCCCCCCCTCCCTCCCTCCCTCCTTTCTAGTCCC
TCGTCGGGCCCGAGGGCACATCCCTCCTCTCCCGCTTGTCGGGCCGATAT
GGGAACATTAAGGACCTCTTGCATGATGATATGGCGGAGGGGGAGGAAGG
AAGGTGAGAGGCGGAGGGAGGGAGGGAGGGAGGGAAAGAAGGAGAGAGGA
ATGGAGGGAGTAGAGCAAGGGGTGCTATCCATAAACAGACGATCTTATCG
GCCTACCTGACCCTTACAATAATATCCCCCTCCCTCCTTCCCTTCCTCCC
TCCCTCCCTCCCTCCCTCCCTCAGGATGGCTTCCGGCGATGGGCGAGGGT
ATGGCACACTAGAGGATGGAGTGGAGATCAAAAGACGGTACGTCTGCCTG
CCTCTCCCTCCCTTCCCCCCCCCCTCCCTCCCTCCCTCCCTCTTCTCTCG
CTGTTGTTGGGGCCTACGCGGGCATCTGGGCTGCTCCTCTGGCCTCCTCC
CCCTTCATCTTCTTCCCTCCCTCCCTCCCTCCCTCCCCCCCTCCCTCAGC
GACTCGCGGGGGAGGAATGACGTCATGCACAGCAGTGTCAATGAGGGCGT
GAAGGGAAACGGGATGAGCCCCGGCGAGAAGAAGCATAAAAAGCCCTTCT
TGTGCAGGGTGAGGAAGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTG
CATCGGTCATAAAGAGGCATGGAAAGAAACCACCTTTGATTCTATGAATT
GCGTGTCCGTAAAAACTCTTGTATCTCCTTCCCTCCCTCCCTCCCTCCCG
CCCGCCCTCCCTCCCTCCCTCCTCCTAGACCCTGCGACATGTCCTCTTCT
GCCGATACCTGAATGTCCTCATGCTCTTCCTCCCCCTCGGCCTCCTCTCG
AACGTCTTCCAATGGGGCGCCGGCCCCACCTTCATCTTCAACTTCCTGGT
TCGTCCTCCCTCCCTCCCGCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCAGGGCCTCGTTTCCCCGGCTCGG
CGGCCATCCGGGGAGCTGCCTGGCAAGGAGGCGACAAACTCACCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTTCCTCTTTCCCTCCAGGGCCTGATTCCCCTGGCTGCCATCCTGG
GCGACTTCACGGAGGAGGTGGCGGAGCATTTAGGGGACACTATTGGAGGG
CTCGTCAACGCCAGCTTCGGGAACCTGATGGGTAGGGAGCGAGGGAGGGA
GGGAGCGAGGGAGGGAGGGAGGGAGGGAGGGAGAGGGAGGGGGAGGGCTG
GTCAATAGAAGCCTTGGGACGTAGATCGGGAGACAGGGAGGGAGGGAGGG
AGGGAGGGAGGGGCAAGCATCCCTTGCTGAGACGATGGCTTTTCCCTCCC
TCCCCTTTCCCCTTTCCTCCTTAGAGATGGTGATAGGCGTGCAGGCGTTG
GCCCAGGGGGAGATCCGGGTAGTCCAAGCCTCCATGCTCGGCTCCATCTT
GTCGAACCTCCTCCTCGTTACAGGCTCCTGCTTCCTCGTCGGTGGTATCC
TGCACAAGGAGCAGCGGTTTAATCCTGTGGCCAGCGTGGCCAACCTGTCC
TTGCTCTTCCTCGCATCCTTGGCACTGGTGATCCCCACGCCTATCGGGTA
AGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGAGAGGGAGAGAGGGC
GGTTGCGATTGGAGATGAATGTCCACGCACAACCATGCACCCATCATCTC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCCCATCCCTC
TCTCAGGCACTCGTATAAACTCAGTCAAGCGCATATTTTGCTCATCTCCC
GCGTAGCTGCCTTTTGCCTCCTTTCGATGTATCTGCAACTGATTGTGTTC
CAGCTCGTTACTCACAAACACTTGTTCGACGGTCACGGGGAGGAGGTAGA
GGAGGAAGAGGAGGAGGAGGACGGAAGCGAGGACGGAAGCGAGGACGGAA
GCGAGGGAGAGGGGGGCAAGAGGAGAGCGGAGGAAGAGAAGGAAGCAACA
GAACTAGAAGAGGGCAAGCGTCTATCTTCGAATGGAGTCGCAAATTCTGT
TGTAAACGGTGCTTCTCACCCTCCTCATGCTGCTGCAGCAGTAGCAGCAG
CCAACGGCACACACCACAAGAGCAAGAGCAGAAGCACGTGCAGCAATCAC
CACCACCACCATCAACAGCAGCAGCAGCGACAGGCAGAGCAGCACCAGCA
CCAGCACCAGCACCGGCACTACATGGAGGACGAGGACGAGGACGAGAACG
GCGACGGAGTGGACTTGGGGCTTTGGGGCTCGATGGCAGGCCTTCTAATC
GTCGCTGTAATCGTATGCATTTTTTCGGACCTGGTCGTTTCGTCTATCGA
TGGGATGAGCGCGGAGTACGGCGTCAGCAAGACATTCGTGGGAGTGATTT
TGTTGCCACTGGTGGGCAATGCCACGGAGCATATGACGGCGGGTAAGGAG
AGAGGGAGGGAGGGAAGGGGGGAGGGAAAGGGGGAGAAAGGGAAGGGGGG
GAGGGGGCAAAGGGGGGAGAAGGGAGGGGGCAGGGAAGAAGGGAAGGATC
AAATGGGAACGAAGGGAGAGTGAAAGGAAGGAAGTGACGAGAGTGCGCTT
TACTTCTCTCCACCACGCGCTGAGCATGTTTTTCATCTTCCCTCCCACAT
TCCCTCCTTCCCCCACTCACTTCCTCCCTTCATTCCCACCCATCCGCACA
TAGTGACAGTCGCAGTCAAGAACAGGATGGAGCTGGCCATGGGCATCGCT
GTCGGTAGCTCCACACAGATCGCCCTCTTCGTCATTCCTGTCCTTACCCT
GGCAGGGTGGGCCTTAGGGCAAAACATGACATTAGAGTTTCCACCAATTG
AGGTAAGGAAATAGTTAGGGTTAGGGTTAGGGTTACGCCATTCCATGCAT
TTTCCCTGTTTCTCAAGTCAAACGCTCGTTCTTCCGCTCACTCCCCGGTC
CATGTCTTGGTTCTTTTTATTTCGTGTTTGATCAACGCGCAGACCAGCAT
CTGCGCCTTTCACAGGCCTTCCTTCCCCCCCATCCACCCCCCACCCACCT
GCCTCTTTTTTGCCACCTACCCCCCACCACCATCAACCAATACCAGATAA
TCACCCTCATTATGAGCATCATTGTCGTGCAGCCTGTCTTATTAAATGCC
CAGTCGAACTGGCTGCTGGGATCGCTCCTCATCACAGCCTACTGCTTCTG
TGGCTTTGCCTTCTTTTTCGAGAAGCCACCGCTGCCTGGACAGTGAGGAG
CGAGGAGAGGGAGGAGAAGGGAGGGCGTGGAGAAAGAAAGGGGGTGGAGA
GACAGGAGGTATGCCATGGTATGTACAGTAAGGGCAGGAAATAAACAGAG
GCTTGTATGTGCCGAAGAAAATTGGAATAGAAAAAATAACAGAATAGAAA
GAGGGAAACAACTGACACGACCAAGGGAGATGTGGAAAGGGAGAATGCGG
GGGAGGGGATAAACGTGGTTTTCGAAGTGGGAAAACCCTGGGTATTATTT
GAAAAGCAAGAGTATTGAAAAGAACTGCATGATATCGCGCTGGTCTGTAG
AAATTGCAAAGGGAAAGAAGGGAGACCCATGTCGGATTTTGGTGAGGCTT
GATTTAGTGGGCGAGAATCGCTTGTACCTGTCTGCTGCGCTCCGCATTTT
TGGAGAAACTTGTTTCCCCTCCTTGAAAAGAAAAGATGATCGAGCCTTGC
GGTGCCGAAGAACAGCGACAGGGATACGATGCGGACGAAGGAGCG

Coding sequence (CDS) from alignment at chr10:1108604..1113798-

>NO10G03820.1 ID=NO10G03820.1|Name=NO10G03820.1|organism=Nannochloropsis oceanica|type=CDS|length=2049bp|location=Sequence derived from alignment at chr10:1108604..1113798- (Nannochloropsis oceanica)
ATGCCGAACGGTGTAGGTGTGCGAACGGAGCTAGCGCCTATCCCTCCCAC
CCGTCCAAGCCCAGCCCAGCCCATGCGCGAGGGTACCACGAGCGACTCTT
TGCTGGACCGCAGTGGAAATGGACGGGACAGGAGCCAGAAAGGCGGCCAT
CGGAGGTCGCTTTCTGCCGGAGAGCCTCTTCCGCGGCAATCCAGTATTGA
GTCGTTAGGGGAGAGCTCCACCACGCCTAGAAACTCCAAAGTGGCCTTGG
GCCACTCTCTCCTCACCGAGGCGCGTCGTTTCATCAAGAAGAAGCCTGCA
CCTATCAAGAGGAGGTGGGAGATCATCCGTGATTCCCTCGTCGGGCCCGA
GGGCACATCCCTCCTCTCCCGCTTGTCGGGCCGATATGGGAACATTAAGG
ACCTCTTGCATGATGATATGGCGGAGGGGGAGGAAGGAAGGATGGCTTCC
GGCGATGGGCGAGGGTATGGCACACTAGAGGATGGAGTGGAGATCAAAAG
ACGCGACTCGCGGGGGAGGAATGACGTCATGCACAGCAGTGTCAATGAGG
GCGTGAAGGGAAACGGGATGAGCCCCGGCGAGAAGAAGCATAAAAAGCCC
TTCTTGTGCAGGACCCTGCGACATGTCCTCTTCTGCCGATACCTGAATGT
CCTCATGCTCTTCCTCCCCCTCGGCCTCCTCTCGAACGTCTTCCAATGGG
GCGCCGGCCCCACCTTCATCTTCAACTTCCTGGGCCTGATTCCCCTGGCT
GCCATCCTGGGCGACTTCACGGAGGAGGTGGCGGAGCATTTAGGGGACAC
TATTGGAGGGCTCGTCAACGCCAGCTTCGGGAACCTGATGGAGATGGTGA
TAGGCGTGCAGGCGTTGGCCCAGGGGGAGATCCGGGTAGTCCAAGCCTCC
ATGCTCGGCTCCATCTTGTCGAACCTCCTCCTCGTTACAGGCTCCTGCTT
CCTCGTCGGTGGTATCCTGCACAAGGAGCAGCGGTTTAATCCTGTGGCCA
GCGTGGCCAACCTGTCCTTGCTCTTCCTCGCATCCTTGGCACTGGTGATC
CCCACGCCTATCGGGCACTCGTATAAACTCAGTCAAGCGCATATTTTGCT
CATCTCCCGCGTAGCTGCCTTTTGCCTCCTTTCGATGTATCTGCAACTGA
TTGTGTTCCAGCTCGTTACTCACAAACACTTGTTCGACGGTCACGGGGAG
GAGGTAGAGGAGGAAGAGGAGGAGGAGGACGGAAGCGAGGACGGAAGCGA
GGACGGAAGCGAGGGAGAGGGGGGCAAGAGGAGAGCGGAGGAAGAGAAGG
AAGCAACAGAACTAGAAGAGGGCAAGCGTCTATCTTCGAATGGAGTCGCA
AATTCTGTTGTAAACGGTGCTTCTCACCCTCCTCATGCTGCTGCAGCAGT
AGCAGCAGCCAACGGCACACACCACAAGAGCAAGAGCAGAAGCACGTGCA
GCAATCACCACCACCACCATCAACAGCAGCAGCAGCGACAGGCAGAGCAG
CACCAGCACCAGCACCAGCACCGGCACTACATGGAGGACGAGGACGAGGA
CGAGAACGGCGACGGAGTGGACTTGGGGCTTTGGGGCTCGATGGCAGGCC
TTCTAATCGTCGCTGTAATCGTATGCATTTTTTCGGACCTGGTCGTTTCG
TCTATCGATGGGATGAGCGCGGAGTACGGCGTCAGCAAGACATTCGTGGG
AGTGATTTTGTTGCCACTGGTGGGCAATGCCACGGAGCATATGACGGCGG
TGACAGTCGCAGTCAAGAACAGGATGGAGCTGGCCATGGGCATCGCTGTC
GGTAGCTCCACACAGATCGCCCTCTTCGTCATTCCTGTCCTTACCCTGGC
AGGGTGGGCCTTAGGGCAAAACATGACATTAGAGTTTCCACCAATTGAGA
TAATCACCCTCATTATGAGCATCATTGTCGTGCAGCCTGTCTTATTAAAT
GCCCAGTCGAACTGGCTGCTGGGATCGCTCCTCATCACAGCCTACTGCTT
CTGTGGCTTTGCCTTCTTTTTCGAGAAGCCACCGCTGCCTGGACAGTGA

Synonyms

Publications