NO10G03640.2, NO10G03640.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G03640.2
Unique NameNO10G03640.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4619
Alignment locationchr10:1046892..1052031 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1046892..1052031 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO10G03640.2 vs.
Match: XP_005853421.1 (hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526]; EKU22940.1 hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1088.9 bits (2815), Expect = 0.000e+0
Identity = 580/1031 (56.26%), Postives = 722/1031 (70.03%), Query Frame = 0
Query:    5 ATTVTPAVPTASKAAPAQGTGDLTFA------QELLETGTVGGVTLGAALGALPGASTVNGAFNELASDLANLAGLRTCSPVDGPDLERMVAGSSTCGVILLTKGSMVPYHTEKTMVVSTRKIIVGHPIDLPQIITARKVERVFDVVSGGSLDIRFVTIFRAFGYEPTDELRIITGGVALVRLGGFFRGTAVIFRDPTQNLAGFQGSLARPYQRRRTYGGHVLVMGGSFFCYGCQVIRWAPYGLVLLNVFQVGRDFLVVAGTSVMVGMYHLFFTPFLSGISVGNAIAVLGGVSVRIGGGTEGVAVLVGQFGAGQNIFVGGGVLVNVGHQQQTAFVCLMRAGYGMTALGAGVFIHIAELENRAWGAAAIVGAGQVYSNGAGVFDKTGGEVVNSAISAFQALVGGSAYFGTGDMNIVGEQFARLVLTLDQNGVGMTWFNGAGSGTLILTPSMVIALVRSQKILGAEVFQGAGFFTEVNGTRWTFQLVNAQIPGYEGWIGLGAALLVRTRTTVRRLVNYRAGKKVAWVVNGVGVNESLRNNFNILATKNGTQALKPQPTKPGKHRLLEAVDDLVSSAV--TRAGRGKGRALMRGFSRPALSMADSVMDSKKIQPPNPGILAEKLQALVSGLKNKRRLQGQPAVNPTRIMNMFNGLSPASLMKAWQEAVDEANSSP-------DDRALAAGNDADEVDADGRWGEQVYVGGGDASQCVLCGVGPGTTESHWNRDAGDDPATCHITEACTPADSVQGIMGKLRGALPDGEDLVVPPVAKGWAKTVGS-----KYTARILQDMDDHQAENPGADVKLPDTNILTYDIFLYCPVADAECEYSQADMKTAFQDYLDDVAQEETAFRISSATAAVHPAIFKSVNDADESFVSAIGAPAL-EGCGKGLSFSLFVTTPDKSSVTDVKTILEKAGTDSDELLAFINDQGEQEASFCSVSVTKRSAMFFPSVDTAAGKSFYQKLYTGNALDSGSLWPDITVVSAHEVAPVQHAVADQSYTLLLEGFAMKAEVVVELFQGTQSSG 1015
            AT V P    AS A+ ++ + DLT A       +L+  G      +G   GALPGA+ VNGAFN LA+  A+LAGL+ C P  GP+L+ MV   S+C V++L KGS   Y    T++V++  II+GHPID PQI   + V R+FDV +G  +DIRFV++FR           +I  G  LVR GG+FRG+ VIFR   Q   GF   L  P   +R  GG VLV GG+FFCYGCQ+IRWAPYG   +N+ +VGRD+LV+AGTSV +G YH+   PF S ++VGNA+ VLGGV +R+GGGT G AVL GQFGAG+N+FVGGGVLVNVGHQQQTAFVCL RA +GMTA+G+GV + IAELENRAWG AAI GAGQVYSNGAGV DKTGGEVVN AIS FQAL GGS Y GTGDMN+VGEQFAR+ +TLDQNGVGMT+FNGAG  +LI  PS V A+ RSQKILGAE F GAGFFT VN TRWT Q+VNA IPGYEGWIGLGAAL VR+RTTVRR+VN+R     AWVVNG GV  S     NI   K+G +  KP P+   K RLL AVD++V   +   R  +G    +     RPA+ MA+S MDS +++PP+P ILA K+ ++V+ LK+KRRLQGQ  VNPTR+MNM  GLSPA LM+AW+EA +E N +P       + RALA   D   VD +GRW EQVYVGG + +QCV+CGVGPG + SHW+   G+D ATCH+TE CT   S + I+   + ALP  E+LV+PPVAKG AK +GS     KYT RILQ M++HQ  NPGA+ KLPD NIL Y++ LYC   DA+C ++QADMK A + +L + A EE+AF ++++T  VHPA+   V +A   F+ ++ AP+   GCGKGL F++ +T PD +SV D++ I E   ++ + LL  IN   E++  FC V V+K S +FFPS+DTA G  FYQ L+TGN LD GSLWPD+T+VS HEVAPVQHAV  Q YT+LLE FAMK +VVVELFQGT+  G
Sbjct:   86 ATVVEPVKAPASTASESKPS-DLTIATKEDESDKLISFGDGERNFIGPLFGALPGAAAVNGAFNTLAASAASLAGLQVCYPETGPELKAMVESGSSCSVVILKKGSSYIYLLPSTVMVTSSVIILGHPIDPPQIHPEKGVYRLFDVAAGSHIDIRFVSLFRPALRNVGGNRSLIVAGCVLVRTGGYFRGSGVIFRQQAQTFEGFVKGLMDPLAPKRIVGGFVLVAGGAFFCYGCQIIRWAPYGAPNINLVEVGRDYLVLAGTSVCIGCYHVACAPFQSSVNVGNAVGVLGGVGIRVGGGTIGAAVLKGQFGAGENLFVGGGVLVNVGHQQQTAFVCLNRANFGMTAVGSGVMVLIAELENRAWGVAAITGAGQVYSNGAGVLDKTGGEVVNCAISFFQALAGGSVYLGTGDMNMVGEQFARVAVTLDQNGVGMTFFNGAGQTSLIYVPSFVAAVARSQKILGAEGFLGAGFFTNVNNTRWTIQVVNAGIPGYEGWIGLGAALFVRSRTTVRRVVNFRF-NPYAWVVNGQGVPGSAYRENNIFVNKDGIRINKPNPS---KSRLLAAVDEMVDGHLKSKRNTQGLLAGIKNFVDRPAVVMANSEMDSARMRPPDPQILAGKILSMVTSLKHKRRLQGQAVVNPTRMMNMLAGLSPAKLMEAWKEATEETNRNPLLSLVQGNSRALAETADPTAVDENGRWAEQVYVGGKE-TQCVMCGVGPGPSSSHWS-TGGNDTATCHVTEECTSRSSFRDILAAAKNALPQNEELVLPPVAKGVAKALGSTDLAPKYTRRILQMMEEHQEANPGAEPKLPDHNILAYELSLYCNADDADCSFNQADMKAAVKLFLGEQADEESAFNVAASTTDVHPALIDYVKEASSEFLDSVKAPSHGSGCGKGLKFNVQMTAPDAASVKDLQKIFEGVASNGESLLDTINKYDERDVPFCDVKVSKPSTLFFPSIDTAQGIKFYQGLFTGNVLDKGSLWPDVTLVSPHEVAPVQHAVVGQPYTVLLENFAMKGDVVVELFQGTEKKG 1109          
The following BLAST results are available for this feature:
BLAST of NO10G03640.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_005853421.10.000e+056.26hypothetical protein NGA_0438900, partial [Nannoch... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G03640NO10G03640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G03640.2NO10G03640.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G03640.2.cds1NO10G03640.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G03640.2.cds2NO10G03640.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G03640.2.cds3NO10G03640.2.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G03640.2.cds4NO10G03640.2.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G03640.2 ID=NO10G03640.2|Name=NO10G03640.2|organism=Nannochloropsis oceanica|type=mRNA|length=4619bp
GGCCCTGTGATCACTTTTAAGCCGATATATACACCCCATCCAGTCGCAAT
CGCTTACTTTGCTGCAACAAGCGACCATGGGCCCCTCCAATCTCTTTTTG
GCTCGCCCTACTCATTCTTCTTGGAACTCACCTGCCACTCAAGCTCGCGA
GAAAGACAGGACCGCAAGGCCCCTTGCTCACTCTCGGTCACTTTGGAGAT
GACACGCATCCATCGAGTCGCAATCGCTCACTTTGCTACAATAAGCGACC
ATGAGCCCCTCCACTCTACTCGCTTCCTGTCTCGCCTTTTTCATTCTTCT
TGAAACTCACCTGCCGCTCAAGCTCGTGAGAATGACAGGACTGCTAGGCC
CCTTGGCCACTCTTGGCCACTTTCAAGACGATGTACACCCGTTGGATCGC
AATCGCTTACTTTGCTACAAGAACCGACCAAGCGGCACGCCAAATCATAG
GCCCTTACAAGGACACTTTGGCGGTTGAATTGAATGGGGAACAAGCGTCC
ACCTCTCGGTTGAAATGACGCCTGCACTTATTGTTTCCATGCTCCCCATA
AGCTATGTCGATGCACCCTCATAACCTCACACCACTCCACGCCTTCTCTT
CCCCTTTCATGTAGACTACGCTGCAAGACGAGCAGAACAGAACACAGGGT
CTCCGGCTGTCCGTATCATATCCATCCCATGACTTCCGGAGCGACCATGA
ACGAGGCCGGGCCCCAAGAGGAGTCCCGACGCCGTCGCCGGCGTGTTCTA
CTGGGCTCGCTGGGTGCAGTGTGTCTGATCGTCGGTGCCGCGTTGGCCAT
AACCTTTGCTGGAAAGGGCCAGGGCAAGAATAAGCCGGAGCCGGCGGCTA
CCGTAGAGGGGGGCGTGTCTCCGATGGGAGACCTTCCAGGCCTTGTGAAG
GATTCAGGTGAGAAAACATAAGGGGAGGACGGCAGGAAATGGAGGGTGCA
TACCCTGTGCGCAGAACTGATCCCCTGAGTTGACACCTCGTGCTATTGCC
TCTGCTGGTGCTGGTGGTGCTGCTCCTATGCTTCAAATTCGCATCCATTG
CAACCCCTTTTTGAGTGCATTATCTTCTGTCGGCGACGACTTTCTCATGC
CCCCATCGTTCTCTACTGAGCCGCTTTGATCGCATCAAAGGGCAGCTCTG
ACACCATCCGGATGCATCCAGTGTATGATGCCTTTCCTCTTCTCAATCCC
TCCTTTGCCCCTCCACTCCTGATCTCCCCCCTGCACCGCTCTGATGATCA
GCAGCATCACCCGCCTATCATAACGATTCAATCGTTTCTCTGACACTTCT
CCGCTTTCCTCTTTCTCTCTCTTGCTCTACAGTGCTGTCATCCAACGCAG
CCACCACCGGTGCCGCCCCGAAACCCGTTGCTACGATGGAACCCCTAGCT
ACGACGGTTACGCCCGCCGTCCCCACAGCGTCAAAGGCAGCGCCTGCTCA
GGGCACTGGTGACCTCACATTTGCTCAGGAGCTCCTCGAAACCGGCACGG
TGGGAGGCGTTACACTCGGCGCGGCACTGGGTGCTTTGCCCGGAGCTTCG
ACTGTGAATGGAGCCTTTAACGAATTAGCGAGCGATTTGGCCAACCTGGC
AGGCCTTCGCACTTGCTCCCCCGTGGATGGTCCTGATCTGGAGCGAATGG
TGGCGGGCTCGAGCACTTGCGGCGTCATTCTCCTGACGAAGGGCTCTATG
GTCCCGTACCATACAGAGAAGACGATGGTTGTGTCAACCCGCAAGATTAT
CGTGGGCCACCCTATTGATCTTCCCCAAATCATCACGGCCAGGAAAGTAG
AGCGGGTCTTTGACGTGGTGTCGGGGGGCTCCTTGGACATTCGTTTCGTG
ACCATCTTCCGCGCATTCGGCTATGAACCGACAGATGAACTCCGCATCAT
CACCGGCGGTGTTGCGTTGGTGCGCTTGGGAGGCTTCTTCCGCGGTACGG
CCGTGATTTTCCGCGACCCCACTCAGAATCTCGCCGGTTTTCAAGGCTCG
CTGGCGCGCCCCTATCAGCGTCGCCGCACGTACGGCGGGCACGTCCTAGT
GATGGGGGGCTCCTTCTTTTGTTACGGATGTCAGGTAATCCGGTGGGCCC
CTTACGGGCTGGTTCTTTTGAACGTGTTCCAAGTTGGCCGTGATTTCTTG
GTTGTTGCCGGGACGAGCGTCATGGTCGGCATGTATCATTTGTTCTTCAC
GCCTTTCCTCAGTGGTATCAGCGTCGGGAATGCTATCGCTGTCCTGGGCG
GCGTCAGTGTTCGCATTGGTGGCGGAACAGAGGGGGTTGCGGTTCTTGTT
GGACAATTTGGTGCGGGCCAGAATATATTTGTGGGCGGCGGGGTGCTCGT
GAATGTGGGCCATCAGCAGCAGACCGCCTTTGTGTGCCTTATGCGTGCGG
GCTACGGCATGACTGCTCTTGGTGCTGGGGTGTTTATTCACATTGCGGAA
CTTGAGAATCGTGCGTGGGGTGCGGCTGCCATCGTCGGTGCCGGGCAGGT
GTACTCCAATGGCGCGGGCGTTTTCGACAAGACTGGTGGAGAGGTCGTCA
ACAGTGCTATTTCGGCCTTCCAAGCCCTGGTCGGCGGGTCCGCCTATTTT
GGCACGGGCGACATGAACATTGTGGGCGAGCAATTTGCGCGACTTGTTCT
AACCCTCGACCAGAATGGCGTTGGCATGACATGGTTCAACGGAGCCGGAA
GTGGGACACTGATCTTAACGCCCAGTATGGTGATTGCCCTGGTCCGTTCT
CAGAAGATTCTTGGTGCCGAGGTCTTTCAAGGAGCCGGCTTTTTCACAGA
GGTCAACGGTACGCGGTGGACATTTCAGTTGGTGAACGCGCAAATTCCGG
GGTATGAAGGCTGGATCGGGCTAGGCGCCGCCCTGCTTGTCCGCACCCGG
ACCACTGTCAGGCGTCTGGTAAACTACCGCGCTGGCAAGAAAGTGGCGTG
GGTGGTGAATGGGGTCGGTGTCAACGAATCGCTGCGAAACAACTTCAACA
TTCTCGCCACCAAGAACGGCACTCAAGCCCTCAAGCCGCAGCCTACTAAG
CCTGGCAAGCACCGACTCCTGGAAGCTGTGGATGATCTTGTGAGCAGCGC
TGTCACCAGAGCCGGCAGAGGCAAGGGCCGGGCCCTTATGAGAGGTTTTA
GTCGTCCTGCTTTGAGCATGGCTGACAGTGTGATGGACTCGAAGAAGATC
CAGCCTCCCAATCCCGGGATTCTGGCCGAAAAACTGCAGGCCCTGGTGTC
GGGTTTGAAGAATAAACGCCGCCTCCAAGGCCAGCCCGCGGTCAACCCCA
CCCGTATCATGAACATGTTCAATGGCCTGTCGCCAGCCTCGCTCATGAAA
GCTTGGCAAGAGGCCGTGGATGAAGCCAACAGCAGCCCAGACGATCGTGC
CTTGGCTGCAGGAAACGATGCCGACGAGGTGGACGCCGACGGCCGGTGGG
GCGAACAGGTGTACGTGGGCGGCGGTGATGCCTCGCAGTGTGTGCTGTGC
GGGGTCGGTCCCGGGACGACCGAGTCCCACTGGAACAGGGACGCAGGCGA
CGACCCAGCCACCTGCCATATCACGGAGGCATGCACTCCTGCAGATTCAG
TCCAAGGCATCATGGGGAAGCTCAGAGGAGCCTTGCCGGACGGGGAAGAC
TTAGTAGTGCCGCCCGTGGCGAAGGGCTGGGCCAAGACGGTGGGCTCCAA
GTACACGGCGCGTATCTTGCAGGATATGGACGATCACCAGGCGGAGAATC
CGGGGGCGGATGTCAAGCTGCCGGACACGAACATTTTGACCTACGACATT
TTCCTGTACTGCCCCGTGGCCGATGCGGAGTGTGAGTATAGCCAGGCAGA
CATGAAGACGGCATTCCAAGACTATCTGGACGATGTGGCGCAGGAGGAGA
CTGCGTTCAGGATTTCGTCGGCGACTGCAGCGGTGCATCCGGCTATCTTC
AAATCTGTCAATGATGCTGATGAAAGCTTCGTGTCGGCCATTGGGGCGCC
GGCGCTAGAGGGGTGTGGGAAGGGCCTCTCGTTTTCTCTTTTCGTGACGA
CGCCCGACAAATCTTCGGTGACGGATGTGAAGACTATCCTGGAAAAAGCA
GGTACCGACAGTGATGAACTTCTGGCCTTCATCAACGACCAAGGGGAGCA
GGAAGCATCCTTCTGCAGCGTGAGCGTGACGAAGCGCTCAGCAATGTTTT
TCCCGTCCGTGGACACGGCGGCAGGGAAGAGCTTCTATCAGAAGCTTTAC
ACGGGCAACGCGCTGGATTCCGGGAGCCTCTGGCCCGACATCACGGTGGT
GTCGGCGCACGAGGTGGCCCCCGTTCAGCACGCAGTGGCGGATCAGTCCT
ACACACTTTTGTTGGAGGGCTTTGCCATGAAGGCGGAAGTGGTGGTGGAG
CTGTTCCAGGGCACGCAGAGCAGCGGGGTGGAGGTGGCCAGGGTCCCTGG
TGGCATGGGCATCGGCGAGACACGCGAGGTGGCTTGGACGGCTCCTGCGC
CCATGAATGGGGACGGTGGGAATCGGGCTTACGTGCGCGCCTACCACGTT
GGGATGCCGGGCATCTTTGCACAGAGCGAGGTCTTTGATCTCTTGCCCTT
GTCTGTGCTGGATGACTAA
back to top

protein sequence of NO10G03640.2

>NO10G03640.2-protein ID=NO10G03640.2-protein|Name=NO10G03640.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1078bp
MEPLATTVTPAVPTASKAAPAQGTGDLTFAQELLETGTVGGVTLGAALGA
LPGASTVNGAFNELASDLANLAGLRTCSPVDGPDLERMVAGSSTCGVILL
TKGSMVPYHTEKTMVVSTRKIIVGHPIDLPQIITARKVERVFDVVSGGSL
DIRFVTIFRAFGYEPTDELRIITGGVALVRLGGFFRGTAVIFRDPTQNLA
GFQGSLARPYQRRRTYGGHVLVMGGSFFCYGCQVIRWAPYGLVLLNVFQV
GRDFLVVAGTSVMVGMYHLFFTPFLSGISVGNAIAVLGGVSVRIGGGTEG
VAVLVGQFGAGQNIFVGGGVLVNVGHQQQTAFVCLMRAGYGMTALGAGVF
IHIAELENRAWGAAAIVGAGQVYSNGAGVFDKTGGEVVNSAISAFQALVG
GSAYFGTGDMNIVGEQFARLVLTLDQNGVGMTWFNGAGSGTLILTPSMVI
ALVRSQKILGAEVFQGAGFFTEVNGTRWTFQLVNAQIPGYEGWIGLGAAL
LVRTRTTVRRLVNYRAGKKVAWVVNGVGVNESLRNNFNILATKNGTQALK
PQPTKPGKHRLLEAVDDLVSSAVTRAGRGKGRALMRGFSRPALSMADSVM
DSKKIQPPNPGILAEKLQALVSGLKNKRRLQGQPAVNPTRIMNMFNGLSP
ASLMKAWQEAVDEANSSPDDRALAAGNDADEVDADGRWGEQVYVGGGDAS
QCVLCGVGPGTTESHWNRDAGDDPATCHITEACTPADSVQGIMGKLRGAL
PDGEDLVVPPVAKGWAKTVGSKYTARILQDMDDHQAENPGADVKLPDTNI
LTYDIFLYCPVADAECEYSQADMKTAFQDYLDDVAQEETAFRISSATAAV
HPAIFKSVNDADESFVSAIGAPALEGCGKGLSFSLFVTTPDKSSVTDVKT
ILEKAGTDSDELLAFINDQGEQEASFCSVSVTKRSAMFFPSVDTAAGKSF
YQKLYTGNALDSGSLWPDITVVSAHEVAPVQHAVADQSYTLLLEGFAMKA
EVVVELFQGTQSSGVEVARVPGGMGIGETREVAWTAPAPMNGDGGNRAYV
RAYHVGMPGIFAQSEVFDLLPLSVLDD*
back to top

mRNA from alignment at chr10:1046892..1052031-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G03640.2 ID=NO10G03640.2|Name=NO10G03640.2|organism=Nannochloropsis oceanica|type=mRNA|length=5140bp|location=Sequence derived from alignment at chr10:1046892..1052031- (Nannochloropsis oceanica)
GGCCCTGTGATCACTTTTAAGCCGATATATACACCCCATCCAGTCGCAAT CGCTTACTTTGCTGCAACAAGCGACCATGGGCCCCTCCAATCTCTTTTTG GCTCGCCCTACTCATTCTTCTTGGAACTCACCTGCCACTCAAGCTCGCGA GAAAGACAGGACCGCAAGGCCCCTTGCTCACTCTCGGTCACTTTGGAGAT GACACGCATCCATCGAGTCGCAATCGCTCACTTTGCTACAATAAGCGACC ATGAGCCCCTCCACTCTACTCGCTTCCTGTCTCGCCTTTTTCATTCTTCT TGAAACTCACCTGCCGCTCAAGCTCGTGAGAATGACAGGACTGCTAGGCC CCTTGGCCACTCTTGGCCACTTTCAAGACGATGTACACCCGTTGGATCGC AATCGCTTACTTTGCTACAAGAACCGACCAAGCGGCACGCCAAATCATAG GCCCTTACAAGGACACTTTGGCGGTTGAATTGAATGGGGAACAAGCGTCC ACCTCTCGGTTGAAATGACGCCTGCACTTATTGTTTCCATGCTCCCCATA AGCTATGTCGATGCACCCTCATAACCTCACACCACTCCACGCCTTCTCTT CCCCTTTCATGTAGACTACGCTGCAAGACGAGCAGAACAGAACACAGGGT CTCCGGCTGTCCGTATCATATCCATCCCATGACTTCCGGAGCGACCATGA ACGAGGCCGGGCCCCAAGAGGAGTCCCGACGCCGTCGCCGGCGTGTTCTA CTGGGCTCGCTGGGTGCAGTGTGTCTGATCGTCGGTGCCGCGTTGGCCAT AACCTTTGCTGGAAAGGGCCAGGGCAAGAATAAGCCGGAGCCGGCGGCTA CCGTAGAGGGGGGCGTGTCTCCGATGGGAGACCTTCCAGGCCTTGTGAAG GATTCAGGTGAGAAAACATAAGGGGAGGACGGCAGGAAATGGAGGGTGCA TACCCTGTGCGCAGAACTGATCCCCTGAGTTGACACCTCGTGCTATTGCC TCTGCTGGTGCTGGTGGTGCTGCTCCTATGCTTCAAATTCGCATCCATTG CAACCCCTTTTTGAGTGCATTATCTTCTGTCGGCGACGACTTTCTCATGC CCCCATCGTTCTCTACTGAGCCGCTTTGATCGCATCAAAGGGCAGCTCTG ACACCATCCGGATGCATCCAGTGTATGATGCCTTTCCTCTTCTCAATCCC TCCTTTGCCCCTCCACTCCTGATCTCCCCCCTGCACCGCTCTGATGATCA GCAGCATCACCCGCCTATCATAACGATTCAATCGTTTCTCTGACACTTCT CCGCTTTCCTCTTTCTCTCTCTTGCTCTACAGTGCTGTCATCCAACGCAG CCACCACCGGTGCCGCCCCGAAACCCGTTGCTACGATGGAACCCCTAGCT ACGACGGTTACGCCCGCCGTCCCCACAGCGTCAAAGGCAGCGCCTGCTCA GGGCACTGGTGACCTCACATTTGCTCAGGAGCTCCTCGAAACCGGCACGG TGGGAGGCGTTACACTCGGCGCGGCACTGGGTGCTTTGCCCGGAGCTTCG ACTGTGAATGGAGCCTTTAACGAATTAGCGAGCGATTTGGCCAACCTGGC AGGCCTTCGCACTTGCTCCCCCGTGGATGGTCCTGATCTGGAGCGAATGG TGGCGGGCTCGAGCACTTGCGGCGTCATTCTCCTGACGAAGGGCTCTATG GTCCCGTACCATACAGAGAAGACGATGGTTGTGTCAACCCGCAAGATTAT CGTGGGCCACCCTATTGATCTTCCCCAAATCATCACGGCCAGGAAAGTAG AGCGGGTCTTTGACGTGGTGTCGGGGGGCTCCTTGGACATTCGTTTCGTG ACCATCTTCCGCGCATTCGGCTATGAACCGACAGATGAACTCCGCATCAT CACCGGCGGTGTTGCGTTGGTGCGCTTGGGAGGCTTCTTCCGCGGTACGG CCGTGATTTTCCGCGACCCCACTCAGAATCTCGCCGGTTTTCAAGGCTCG CTGGCGCGCCCCTATCAGCGTCGCCGCACGTACGGCGGGCACGTCCTAGT GATGGGGGGCTCCTTCTTTTGTTACGGATGTCAGGTAATCCGGTGGGCCC CTTACGGGCTGGTTCTTTTGAACGTGTTCCAAGTTGGCCGTGATTTCTTG GTTGTTGCCGGGACGAGCGTCATGGTCGGCATGTATCATTTGTTCTTCAC GCCTTTCCTCAGTGGTATCAGCGTCGGGAATGCTATCGCTGTCCTGGGCG GCGTCAGTGTTCGCATTGGTGGCGGAACAGAGGGGGTTGCGGTTCTTGTT GGACAATTTGGTAGGTCGTGCGTGTGTAAAGGAGACGAGGGGTAGTAAGG GAAGAGTGCTAAAGCACTATTAGTGGTCATGAAGGAGCAAGCAGAGAAGC CTTGGACACACCTAACACTAACTCCCAGACGATGTACAACCCCTCCCGAC CCCACCCCCACACACATGACAGGTGCGGGCCAGAATATATTTGTGGGCGG CGGGGTGCTCGTGAATGTGGGCCATCAGCAGCAGACCGCCTTTGTGTGCC TTATGCGTGCGGGCTACGGCATGACTGCTCTTGGTGCTGGGGTGTTTATT CACATTGCGGAACTTGAGAATCGTGCGTGGGGTGCGGCTGCCATCGTCGG TGCCGGGCAGGTGTACTCCAATGGCGCGGGCGTTTTCGACAAGACTGGTG GAGAGGTCGTCAACAGTGCTATTTCGGCCTTCCAAGCCCTGGTCGGCGGG TCCGCGTACGTCAGATTTCTCTCTCCAAACCCCCTTCCTCCTGTCGTGTA TCATAGTAGGCTTGAGTGTGTTTTTGTCTCGCTCAACTGTATGCATCGCC TCGTGTGTGTATTTTGTTTGTGTGATGAAACGGCTAAGGCACAACACTCA CTCCGTGTCCTCTCCTTTCTATCTTCTTCCTTTCTACCTATGATAGCTAT TTTGGCACGGGCGACATGAACATTGTGGGCGAGCAATTTGCGCGACTTGT TCTAACCCTCGACCAGAATGGCGTTGGCATGACATGGTTCAACGGAGCCG GAAGTGGGACACTGATCTTAACGCCCAGTATGGTGATTGCCCTGGTCCGT TCTCAGAAGATTCTTGGTGCCGAGGTACGTCAAGCTTTTCATGACGCAAT TTACGTCTGCTTGTCTCTCATTTTTGGTGATTGACGCTTAATATATGCGT CCATTTCTTCCATAGATATTTTCACCAAGTGTGATCTAATTTGTCTTCAT GCTCCACTTCCATTCCGTGTGTTTCACTCCCATTCCGTGTAGGTCTTTCA AGGAGCCGGCTTTTTCACAGAGGTCAACGGTACGCGGTGGACATTTCAGT TGGTGAACGCGCAAATTCCGGGGTATGAAGGCTGGATCGGGCTAGGCGCC GCCCTGCTTGTCCGCACCCGGACCACTGTCAGGCGTCTGGTAAACTACCG CGCTGGCAAGAAAGTGGCGTGGGTGGTGAATGGGGTCGGTGTCAACGAAT CGCTGCGAAACAACTTCAACATTCTCGCCACCAAGAACGGCACTCAAGCC CTCAAGCCGCAGCCTACTAAGCCTGGCAAGCACCGACTCCTGGAAGCTGT GGATGATCTTGTGAGCAGCGCTGTCACCAGAGCCGGCAGAGGCAAGGGCC GGGCCCTTATGAGAGGTTTTAGTCGTCCTGCTTTGAGCATGGCTGACAGT GTGATGGACTCGAAGAAGATCCAGCCTCCCAATCCCGGGATTCTGGCCGA AAAACTGCAGGCCCTGGTGTCGGGTTTGAAGAATAAACGCCGCCTCCAAG GCCAGCCCGCGGTCAACCCCACCCGTATCATGAACATGTTCAATGGCCTG TCGCCAGCCTCGCTCATGAAAGCTTGGCAAGAGGCCGTGGATGAAGCCAA CAGCAGCCCAGACGATCGTGCCTTGGCTGCAGGAAACGATGCCGACGAGG TGGACGCCGACGGCCGGTGGGGCGAACAGGTGTACGTGGGCGGCGGTGAT GCCTCGCAGTGTGTGCTGTGCGGGGTCGGTCCCGGGACGACCGAGTCCCA CTGGAACAGGGACGCAGGCGACGACCCAGCCACCTGCCATATCACGGAGG CATGCACTCCTGCAGATTCAGTCCAAGGCATCATGGGGAAGCTCAGAGGA GCCTTGCCGGACGGGGAAGACTTAGTAGTGCCGCCCGTGGCGAAGGGCTG GGCCAAGACGGTGGGCTCCAAGTACACGGCGCGTATCTTGCAGGATATGG ACGATCACCAGGCGGAGAATCCGGGGGCGGATGTCAAGCTGCCGGACACG AACATTTTGACCTACGACATTTTCCTGTACTGCCCCGTGGCCGATGCGGA GTGTGAGTATAGCCAGGCAGACATGAAGACGGCATTCCAAGACTATCTGG ACGATGTGGCGCAGGAGGAGACTGCGTTCAGGATTTCGTCGGCGACTGCA GCGGTGCATCCGGCTATCTTCAAATCTGTCAATGATGCTGATGAAAGCTT CGTGTCGGCCATTGGGGCGCCGGCGCTAGAGGGGTGTGGGAAGGGCCTCT CGTTTTCTCTTTTCGTGACGACGCCCGACAAATCTTCGGTGACGGATGTG AAGACTATCCTGGAAAAAGCAGGTACCGACAGTGATGAACTTCTGGCCTT CATCAACGACCAAGGGGAGCAGGAAGCATCCTTCTGCAGCGTGAGCGTGA CGAAGCGCTCAGCAATGTTTTTCCCGTCCGTGGACACGGCGGCAGGGAAG AGCTTCTATCAGAAGCTTTACACGGGCAACGCGCTGGATTCCGGGAGCCT CTGGCCCGACATCACGGTGGTGTCGGCGCACGAGGTGGCCCCCGTTCAGC ACGCAGTGGCGGATCAGTCCTACACACTTTTGTTGGAGGGCTTTGCCATG AAGGCGGAAGTGGTGGTGGAGCTGTTCCAGGGCACGCAGAGCAGCGGGGT GGAGGTGGCCAGGGTCCCTGGTGGCATGGGCATCGGCGAGACACGCGAGG TGGCTTGGACGGCTCCTGCGCCCATGAATGGGGACGGTGGGAATCGGGCT TACGTGCGCGCCTACCACGTTGGGATGCCGGGCATCTTTGCACAGAGCGA GGTCTTTGATCTCTTGCCCTTGTCTGTGCTGGATGACTAA
back to top

Coding sequence (CDS) from alignment at chr10:1046892..1052031-

>NO10G03640.2 ID=NO10G03640.2|Name=NO10G03640.2|organism=Nannochloropsis oceanica|type=CDS|length=3234bp|location=Sequence derived from alignment at chr10:1046892..1052031- (Nannochloropsis oceanica)
ATGGAACCCCTAGCTACGACGGTTACGCCCGCCGTCCCCACAGCGTCAAA
GGCAGCGCCTGCTCAGGGCACTGGTGACCTCACATTTGCTCAGGAGCTCC
TCGAAACCGGCACGGTGGGAGGCGTTACACTCGGCGCGGCACTGGGTGCT
TTGCCCGGAGCTTCGACTGTGAATGGAGCCTTTAACGAATTAGCGAGCGA
TTTGGCCAACCTGGCAGGCCTTCGCACTTGCTCCCCCGTGGATGGTCCTG
ATCTGGAGCGAATGGTGGCGGGCTCGAGCACTTGCGGCGTCATTCTCCTG
ACGAAGGGCTCTATGGTCCCGTACCATACAGAGAAGACGATGGTTGTGTC
AACCCGCAAGATTATCGTGGGCCACCCTATTGATCTTCCCCAAATCATCA
CGGCCAGGAAAGTAGAGCGGGTCTTTGACGTGGTGTCGGGGGGCTCCTTG
GACATTCGTTTCGTGACCATCTTCCGCGCATTCGGCTATGAACCGACAGA
TGAACTCCGCATCATCACCGGCGGTGTTGCGTTGGTGCGCTTGGGAGGCT
TCTTCCGCGGTACGGCCGTGATTTTCCGCGACCCCACTCAGAATCTCGCC
GGTTTTCAAGGCTCGCTGGCGCGCCCCTATCAGCGTCGCCGCACGTACGG
CGGGCACGTCCTAGTGATGGGGGGCTCCTTCTTTTGTTACGGATGTCAGG
TAATCCGGTGGGCCCCTTACGGGCTGGTTCTTTTGAACGTGTTCCAAGTT
GGCCGTGATTTCTTGGTTGTTGCCGGGACGAGCGTCATGGTCGGCATGTA
TCATTTGTTCTTCACGCCTTTCCTCAGTGGTATCAGCGTCGGGAATGCTA
TCGCTGTCCTGGGCGGCGTCAGTGTTCGCATTGGTGGCGGAACAGAGGGG
GTTGCGGTTCTTGTTGGACAATTTGGTGCGGGCCAGAATATATTTGTGGG
CGGCGGGGTGCTCGTGAATGTGGGCCATCAGCAGCAGACCGCCTTTGTGT
GCCTTATGCGTGCGGGCTACGGCATGACTGCTCTTGGTGCTGGGGTGTTT
ATTCACATTGCGGAACTTGAGAATCGTGCGTGGGGTGCGGCTGCCATCGT
CGGTGCCGGGCAGGTGTACTCCAATGGCGCGGGCGTTTTCGACAAGACTG
GTGGAGAGGTCGTCAACAGTGCTATTTCGGCCTTCCAAGCCCTGGTCGGC
GGGTCCGCCTATTTTGGCACGGGCGACATGAACATTGTGGGCGAGCAATT
TGCGCGACTTGTTCTAACCCTCGACCAGAATGGCGTTGGCATGACATGGT
TCAACGGAGCCGGAAGTGGGACACTGATCTTAACGCCCAGTATGGTGATT
GCCCTGGTCCGTTCTCAGAAGATTCTTGGTGCCGAGGTCTTTCAAGGAGC
CGGCTTTTTCACAGAGGTCAACGGTACGCGGTGGACATTTCAGTTGGTGA
ACGCGCAAATTCCGGGGTATGAAGGCTGGATCGGGCTAGGCGCCGCCCTG
CTTGTCCGCACCCGGACCACTGTCAGGCGTCTGGTAAACTACCGCGCTGG
CAAGAAAGTGGCGTGGGTGGTGAATGGGGTCGGTGTCAACGAATCGCTGC
GAAACAACTTCAACATTCTCGCCACCAAGAACGGCACTCAAGCCCTCAAG
CCGCAGCCTACTAAGCCTGGCAAGCACCGACTCCTGGAAGCTGTGGATGA
TCTTGTGAGCAGCGCTGTCACCAGAGCCGGCAGAGGCAAGGGCCGGGCCC
TTATGAGAGGTTTTAGTCGTCCTGCTTTGAGCATGGCTGACAGTGTGATG
GACTCGAAGAAGATCCAGCCTCCCAATCCCGGGATTCTGGCCGAAAAACT
GCAGGCCCTGGTGTCGGGTTTGAAGAATAAACGCCGCCTCCAAGGCCAGC
CCGCGGTCAACCCCACCCGTATCATGAACATGTTCAATGGCCTGTCGCCA
GCCTCGCTCATGAAAGCTTGGCAAGAGGCCGTGGATGAAGCCAACAGCAG
CCCAGACGATCGTGCCTTGGCTGCAGGAAACGATGCCGACGAGGTGGACG
CCGACGGCCGGTGGGGCGAACAGGTGTACGTGGGCGGCGGTGATGCCTCG
CAGTGTGTGCTGTGCGGGGTCGGTCCCGGGACGACCGAGTCCCACTGGAA
CAGGGACGCAGGCGACGACCCAGCCACCTGCCATATCACGGAGGCATGCA
CTCCTGCAGATTCAGTCCAAGGCATCATGGGGAAGCTCAGAGGAGCCTTG
CCGGACGGGGAAGACTTAGTAGTGCCGCCCGTGGCGAAGGGCTGGGCCAA
GACGGTGGGCTCCAAGTACACGGCGCGTATCTTGCAGGATATGGACGATC
ACCAGGCGGAGAATCCGGGGGCGGATGTCAAGCTGCCGGACACGAACATT
TTGACCTACGACATTTTCCTGTACTGCCCCGTGGCCGATGCGGAGTGTGA
GTATAGCCAGGCAGACATGAAGACGGCATTCCAAGACTATCTGGACGATG
TGGCGCAGGAGGAGACTGCGTTCAGGATTTCGTCGGCGACTGCAGCGGTG
CATCCGGCTATCTTCAAATCTGTCAATGATGCTGATGAAAGCTTCGTGTC
GGCCATTGGGGCGCCGGCGCTAGAGGGGTGTGGGAAGGGCCTCTCGTTTT
CTCTTTTCGTGACGACGCCCGACAAATCTTCGGTGACGGATGTGAAGACT
ATCCTGGAAAAAGCAGGTACCGACAGTGATGAACTTCTGGCCTTCATCAA
CGACCAAGGGGAGCAGGAAGCATCCTTCTGCAGCGTGAGCGTGACGAAGC
GCTCAGCAATGTTTTTCCCGTCCGTGGACACGGCGGCAGGGAAGAGCTTC
TATCAGAAGCTTTACACGGGCAACGCGCTGGATTCCGGGAGCCTCTGGCC
CGACATCACGGTGGTGTCGGCGCACGAGGTGGCCCCCGTTCAGCACGCAG
TGGCGGATCAGTCCTACACACTTTTGTTGGAGGGCTTTGCCATGAAGGCG
GAAGTGGTGGTGGAGCTGTTCCAGGGCACGCAGAGCAGCGGGGTGGAGGT
GGCCAGGGTCCCTGGTGGCATGGGCATCGGCGAGACACGCGAGGTGGCTT
GGACGGCTCCTGCGCCCATGAATGGGGACGGTGGGAATCGGGCTTACGTG
CGCGCCTACCACGTTGGGATGCCGGGCATCTTTGCACAGAGCGAGGTCTT
TGATCTCTTGCCCTTGTCTGTGCTGGATGACTAA
back to top
Synonyms
Publications