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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr10 | genome | chr10:856431..858839 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO10G03090.1 vs.
Match: EWM25526.1 (kazal-type serine protease inhibitor domain protein [Nannochloropsis gaditana]) HSP 1 Score: 723.4 bits (1866), Expect = 5.500e-205 Identity = 344/574 (59.93%), Postives = 426/574 (74.22%), Query Frame = 0
Query: 1 MKCYSVLVATAGLVSVVNGAEQACGTLLAPACPDGSFCSTVAGQCPVALGGLNSKGGVCKIMPDICTYEVEPVCGCDGKDYSNECEASAMGVSIAARGECTRGDTIGDLRPG---NTKGESDLPVAVAEVTGTSTTDCGGASDIKCAPEYVCIYQPGNECGVANGLGKCELAADMMCTAEYLPVCGCDNKTYSNACVAQYQVRVDVKHKGECKEDEETATAEIAEVVDKEEEADAISSNSGLFPIRDGGIINGAESANDT--DGPFSAHACNNNKDCGFNGYCYIQEGGCSSNNPVTEGVCTKKPLMCDSPPFTTVFTAVCGCDGTTYPTECYAQHAGVSILYRGACFKKGAPAPADSCGGKGIYTTACDKEGFYCQYQQGVCSLYDSLGSCSAKPETCTEEMDPVCGCDGRTFSNPCKASMAGISIKSKGECPLLTIDDGWGGGDLPFAAFSNVTGGACKPSVDILCSEGFYCTFAPGTCGSE-TGEGICVAQPSSCVPDPSTAHPVCGCDGHSWSTACNAAMAGVSVKAEMDCQLNTATQVTSGGVSRLGIRLRGLMAVITVGGMVLGAVIL 569
M+ S++ AGLV V GAEQ CGT LAP CPDGSFCST G+C LGGLN+KGG+CK+ PD+C V+PVCGCDG DYSNECEA+ GVS+ ++G C + + +LRPG N +G+ D + A + GTSTTDCGG + IKCAP++VCIY+ GNECG A G G CE D+MC +Y PVCGCD TYSNACVAQYQ V V+ G C ED TA+IA+ ++ + P D +I+GAE + G F H C +KDCG +GYC++QEGGCSS NP+TEGVC KKPL C+SPPFTT FTAVCGCDGTTYPTEC+A+ AG+SILYRGACF++G PAPADSCGGKG+Y C+KEG+YC YQ+GVCSL+DSLG+C++KP CT+E+DPVCGC+G+T+ N CKA+MAG SIKSKGECP +TIDDGWGGG L +NVTGG CKPS + CSEG+YCT+A G CGSE T EG+CV QP SCVPDPS+AH VCGCDGHSW+TAC+AAMAGV++KAE +C L + QVTS + R R+ G+M ++TV G++LGA+ +
Sbjct: 12 MRTLSLIATAAGLVGVAYGAEQTCGTRLAPECPDGSFCSTGLGECTSLLGGLNTKGGMCKLKPDMCAQFVDPVCGCDGVDYSNECEANMKGVSVQSKGNCPKSGGLNNLRPGIGGNAEGDHD---STAAIYGTSTTDCGGPTAIKCAPDHVCIYEAGNECGKAEGSGHCEPTKDIMCMTDYTPVCGCDGTTYSNACVAQYQNGVPVRGPGTC-EDASEGTADIADTSGGQDVEE---------PAND--LIDGAEEVGEEREGGLFPTHKCTADKDCGLHGYCHVQEGGCSSKNPITEGVCAKKPLRCESPPFTTAFTAVCGCDGTTYPTECHARQAGMSILYRGACFRQGTPAPADSCGGKGLYAETCNKEGYYCLYQRGVCSLHDSLGTCTSKPAMCTQEIDPVCGCNGKTYDNACKAAMAGSSIKSKGECPFVTIDDGWGGGGLTIGLLANVTGGPCKPSAGLTCSEGYYCTYAAGVCGSEATAEGLCVVQPESCVPDPSSAHSVCGCDGHSWATACDAAMAGVALKAETECPL-VSVQVTSPAMHRYRGRVGGVMVMMTVFGILLGALAI 569
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO10G03090.1 ID=NO10G03090.1|Name=NO10G03090.1|organism=Nannochloropsis oceanica|type=mRNA|length=1981bp AAACACAGACAATTCTACATAAAAATGAAATGTTATTCTGTCCTGGTGGC CACTGCTGGGCTGGTGAGCGTCGTTAATGGTGCAGAGCAAGCCTGCGGGA CGTTGCTGGCCCCCGCTTGCCCTGATGGGTCCTTTTGCAGCACAGTGGCA GGCCAGTGCCCAGTTGCATTGGGAGGGCTAAATAGCAAAGGAGGGGTCTG CAAGATCATGCCGGACATATGCACATATGAAGTCGAACCCGTCTGCGGCT GTGACGGCAAGGACTACTCTAACGAATGCGAGGCCAGCGCGATGGGTGTG TCGATTGCGGCCAGAGGAGAATGCACAAGAGGTGACACAATCGGAGATCT CCGTCCAGGCAATACAAAAGGCGAAAGCGACCTCCCCGTAGCTGTGGCTG AGGTCACGGGCACGTCGACCACGGATTGCGGTGGGGCCTCTGACATCAAA TGCGCACCTGAGTATGTTTGTATTTATCAGCCAGGAAACGAGTGTGGAGT TGCCAATGGCCTGGGGAAGTGTGAGCTGGCTGCAGACATGATGTGCACGG CCGAATATCTCCCCGTCTGCGGCTGTGACAACAAAACCTACAGCAACGCC TGCGTGGCACAGTACCAAGTTAGAGTCGACGTGAAGCACAAAGGCGAATG TAAAGAGGACGAGGAGACCGCAACCGCTGAGATTGCAGAAGTGGTAGACA AAGAAGAAGAAGCAGACGCCATTAGCAGCAACAGCGGCCTCTTTCCTATC CGCGACGGGGGGATTATCAATGGCGCAGAATCCGCGAATGACACGGATGG CCCATTCTCTGCTCATGCGTGCAATAACAATAAGGACTGTGGGTTCAATG GGTATTGCTACATCCAGGAGGGAGGATGTAGCAGCAATAATCCGGTGACT GAAGGTGTGTGCACCAAGAAGCCTTTGATGTGCGATTCGCCACCTTTTAC CACGGTGTTCACGGCGGTGTGTGGATGTGATGGCACAACGTACCCGACGG AGTGCTACGCGCAGCATGCCGGCGTGAGTATTTTGTATCGGGGGGCCTGT TTCAAGAAGGGGGCCCCGGCGCCAGCTGACAGTTGTGGGGGGAAGGGGAT ATACACCACAGCCTGCGACAAGGAAGGGTTTTACTGTCAGTACCAGCAGG GAGTCTGCAGCCTCTACGATAGTTTGGGCTCATGTTCGGCCAAGCCGGAG ACTTGTACTGAGGAAATGGACCCTGTCTGTGGCTGTGATGGGCGCACGTT CAGCAATCCTTGCAAGGCCTCCATGGCGGGAATTTCGATTAAGAGCAAGG GAGAATGTCCTCTCTTGACGATTGACGACGGGTGGGGAGGGGGAGATTTA CCCTTTGCGGCGTTCAGCAATGTCACAGGCGGTGCTTGCAAGCCTAGTGT GGACATTTTGTGCTCTGAAGGTTTTTATTGCACGTTTGCGCCGGGGACAT GCGGATCGGAGACCGGGGAAGGAATCTGTGTCGCCCAGCCTTCATCTTGC GTGCCAGACCCCTCCACGGCCCACCCTGTGTGTGGATGTGATGGGCATTC ATGGAGTACTGCGTGCAATGCAGCCATGGCGGGCGTATCGGTGAAAGCCG AGATGGATTGTCAACTTAACACTGCCACGCAAGTCACCTCCGGGGGCGTT TCTCGATTGGGAATCCGCCTGAGGGGATTGATGGCTGTGATAACGGTGGG TGGGATGGTGCTAGGAGCGGTCATTCTGCTCTAGAAGAGAAATTGCGATG AGAGGGTCGGTAGCAGAGGATGAACATTGCATGTTGTATGATCATCAGTG GGAAAGAAAAGACAAGAGTGTACTAAAAGAGGTGGGAATTTGTGAAAGGA GAAGCAGACAGTCGAACAAGAGAAGAGGTTGGGGCAGGATTTCCATGTTG TTTTTATAGAAGGAATGATGGTGTAAGTATCTGTTTTTTTCTCTGTTGTG TTCGTTTGTTTTCTTCGTTTGATGGTAGGGT back to topprotein sequence of NO10G03090.1 >NO10G03090.1-protein ID=NO10G03090.1-protein|Name=NO10G03090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=570bp MKCYSVLVATAGLVSVVNGAEQACGTLLAPACPDGSFCSTVAGQCPVALG GLNSKGGVCKIMPDICTYEVEPVCGCDGKDYSNECEASAMGVSIAARGEC TRGDTIGDLRPGNTKGESDLPVAVAEVTGTSTTDCGGASDIKCAPEYVCI YQPGNECGVANGLGKCELAADMMCTAEYLPVCGCDNKTYSNACVAQYQVR VDVKHKGECKEDEETATAEIAEVVDKEEEADAISSNSGLFPIRDGGIING AESANDTDGPFSAHACNNNKDCGFNGYCYIQEGGCSSNNPVTEGVCTKKP LMCDSPPFTTVFTAVCGCDGTTYPTECYAQHAGVSILYRGACFKKGAPAP ADSCGGKGIYTTACDKEGFYCQYQQGVCSLYDSLGSCSAKPETCTEEMDP VCGCDGRTFSNPCKASMAGISIKSKGECPLLTIDDGWGGGDLPFAAFSNV TGGACKPSVDILCSEGFYCTFAPGTCGSETGEGICVAQPSSCVPDPSTAH PVCGCDGHSWSTACNAAMAGVSVKAEMDCQLNTATQVTSGGVSRLGIRLR GLMAVITVGGMVLGAVILL* back to topmRNA from alignment at chr10:856431..858839+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO10G03090.1 ID=NO10G03090.1|Name=NO10G03090.1|organism=Nannochloropsis oceanica|type=mRNA|length=2409bp|location=Sequence derived from alignment at chr10:856431..858839+ (Nannochloropsis oceanica) AAACACAGACAATTCTACATAAAAATGAAATGTTATTCTGTCCTGGTGGC
CACTGCTGGGCTGGTGAGCGTCGTTAATGGTGCAGAGCAAGCGTAAGTGC
TGGAGTAGAAATCGTGTGTATGAGGAAGGCAGGGCGGAGGACGAGGAACT
TACTCACCGTAGTACCACGTCTTGGCGTGAAGTTTTCTTTAGCGTAAACC
AAAGCTATTTTTGACTCTAGGAGGACCCCGAGAGCAGTGATAAGTTCGGA
AGATAGAGTCTATGCACTCACCCTCTCTTTTATCTACCCTATGTCACATT
ACAGCTGCGGGACGTTGCTGGCCCCCGCTTGCCCTGATGGGTCCTTTTGC
AGCACAGTGGCAGGCCAGTGCCCAGTTGCATTGGGAGGGCTAAATAGCAA
AGGAGGGGTCTGCAAGATCATGCCGGACATATGCACATATGAAGTCGAAC
CCGTCTGCGGCTGTGACGGCAAGGACTACTCTAACGAATGCGAGGCCAGC
GCGATGGGTGTGTCGATTGCGGCCAGAGGAGAATGCACAAGAGGTGACAC
AATCGGAGATCTCCGTCCAGGCAATACAAAAGGCGAAAGCGACCTCCCCG
TAGCTGTGGCTGAGGTCACGGGCACGTCGACCACGGATTGCGGTGGGGCC
TCTGACATCAAATGCGCACCTGAGTATGTTTGTATTTATCAGCCAGGAAA
CGAGTGTGGAGTTGCCAATGGCCTGGGGAAGTGTGAGCTGGCTGCAGACA
TGATGTGCACGGTAAGTGCTATTTGTGGGGGGAGGGAGAGTTGGAAATGG
AAAGGAAGGTTTGCGTGTATGCATCGGTAAAAGCAGGCTCAAAATTTCAC
CAATTAATACGAGTTTCATCCTTTTGAGCCTTACTCGTCTTTCTCCTTTC
ATTCTCGAAATACGGATCTACTCATCCTCCTCCTTCCAATTCTCTATTTC
TCCACTTCTCCCTCCCCCCTTGCCTAGGCCGAATATCTCCCCGTCTGCGG
CTGTGACAACAAAACCTACAGCAACGCCTGCGTGGCACAGTACCAAGTTA
GAGTCGACGTGAAGCACAAAGGCGAATGTAAAGAGGACGAGGAGACCGCA
ACCGCTGAGATTGCAGAAGTGGTAGACAAAGAAGAAGAAGCAGACGCCAT
TAGCAGCAACAGCGGCCTCTTTCCTATCCGCGACGGGGGGATTATCAATG
GCGCAGAATCCGCGAATGACACGGATGGCCCATTCTCTGCTCATGCGTGC
AATAACAATAAGGACTGTGGGTTCAATGGGTATTGCTACATCCAGGAGGG
AGGATGTAGCAGCAATAATCCGGTGACTGAAGGTGTGTGCACCAAGAAGC
CTTTGATGTGCGATTCGCCACCTTTTACCACGGTGTTCACGGCGGTGTGT
GGATGTGATGGCACAACGTACCCGACGGAGTGCTACGCGCAGCATGCCGG
CGTGAGTATTTTGTATCGGGGGGCCTGTTTCAAGAAGGGGGCCCCGGCGC
CAGCTGACAGTTGTGGGGGGAAGGGGATATACACCACAGCCTGCGACAAG
GAAGGGTTTTACTGTCAGTACCAGCAGGGAGTCTGCAGCCTCTACGATAG
TTTGGGCTCATGTTCGGCCAAGCCGGAGACTTGTACTGAGGAAATGGACC
CTGTCTGTGGCTGTGATGGGCGCACGTTCAGCAATCCTTGCAAGGCCTCC
ATGGCGGGAATTTCGATTAAGAGCAAGGGAGAATGTCCTCTCTTGACGAT
TGACGACGGGTGGGGAGGGGGAGATTTACCCTTTGCGGCGTTCAGCAATG
TCACAGGCGGTGCTTGCAAGCCTAGTGTGGACATTTTGTGCTCTGAAGGT
TTTTATTGCACGTTTGCGCCGGGGACATGCGGATCGGAGACCGGGGAAGG
AATCTGTGTCGCCCAGCCTTCATCTTGCGTGCCAGACCCCTCCACGGCCC
ACCCTGTGTGTGGATGTGATGGGCATTCATGGAGTACTGCGTGCAATGCA
GCCATGGCGGGCGTATCGGTGAAAGCCGAGATGGATTGTCAACTTAACAC
TGCCACGCAAGTCACCTCCGGGGGCGTTTCTCGATTGGGAATCCGCCTGA
GGGGATTGATGGCTGTGATAACGGTGGGTGGGATGGTGCTAGGAGCGGTC
ATTCTGCTCTAGAAGAGAAATTGCGATGAGAGGGTCGGTAGCAGAGGATG
AACATTGCATGTTGTATGATCATCAGTGGGAAAGAAAAGACAAGAGTGTA
CTAAAAGAGGTGGGAATTTGTGAAAGGAGAAGCAGACAGTCGAACAAGAG
AAGAGGTTGGGGCAGGATTTCCATGTTGTTTTTATAGAAGGAATGATGGT
GTAAGTATCTGTTTTTTTCTCTGTTGTGTTCGTTTGTTTTCTTCGTTTGA
TGGTAGGGT back to topCoding sequence (CDS) from alignment at chr10:856431..858839+ >NO10G03090.1 ID=NO10G03090.1|Name=NO10G03090.1|organism=Nannochloropsis oceanica|type=CDS|length=1710bp|location=Sequence derived from alignment at chr10:856431..858839+ (Nannochloropsis oceanica) ATGAAATGTTATTCTGTCCTGGTGGCCACTGCTGGGCTGGTGAGCGTCGT TAATGGTGCAGAGCAAGCCTGCGGGACGTTGCTGGCCCCCGCTTGCCCTG ATGGGTCCTTTTGCAGCACAGTGGCAGGCCAGTGCCCAGTTGCATTGGGA GGGCTAAATAGCAAAGGAGGGGTCTGCAAGATCATGCCGGACATATGCAC ATATGAAGTCGAACCCGTCTGCGGCTGTGACGGCAAGGACTACTCTAACG AATGCGAGGCCAGCGCGATGGGTGTGTCGATTGCGGCCAGAGGAGAATGC ACAAGAGGTGACACAATCGGAGATCTCCGTCCAGGCAATACAAAAGGCGA AAGCGACCTCCCCGTAGCTGTGGCTGAGGTCACGGGCACGTCGACCACGG ATTGCGGTGGGGCCTCTGACATCAAATGCGCACCTGAGTATGTTTGTATT TATCAGCCAGGAAACGAGTGTGGAGTTGCCAATGGCCTGGGGAAGTGTGA GCTGGCTGCAGACATGATGTGCACGGCCGAATATCTCCCCGTCTGCGGCT GTGACAACAAAACCTACAGCAACGCCTGCGTGGCACAGTACCAAGTTAGA GTCGACGTGAAGCACAAAGGCGAATGTAAAGAGGACGAGGAGACCGCAAC CGCTGAGATTGCAGAAGTGGTAGACAAAGAAGAAGAAGCAGACGCCATTA GCAGCAACAGCGGCCTCTTTCCTATCCGCGACGGGGGGATTATCAATGGC GCAGAATCCGCGAATGACACGGATGGCCCATTCTCTGCTCATGCGTGCAA TAACAATAAGGACTGTGGGTTCAATGGGTATTGCTACATCCAGGAGGGAG GATGTAGCAGCAATAATCCGGTGACTGAAGGTGTGTGCACCAAGAAGCCT TTGATGTGCGATTCGCCACCTTTTACCACGGTGTTCACGGCGGTGTGTGG ATGTGATGGCACAACGTACCCGACGGAGTGCTACGCGCAGCATGCCGGCG TGAGTATTTTGTATCGGGGGGCCTGTTTCAAGAAGGGGGCCCCGGCGCCA GCTGACAGTTGTGGGGGGAAGGGGATATACACCACAGCCTGCGACAAGGA AGGGTTTTACTGTCAGTACCAGCAGGGAGTCTGCAGCCTCTACGATAGTT TGGGCTCATGTTCGGCCAAGCCGGAGACTTGTACTGAGGAAATGGACCCT GTCTGTGGCTGTGATGGGCGCACGTTCAGCAATCCTTGCAAGGCCTCCAT GGCGGGAATTTCGATTAAGAGCAAGGGAGAATGTCCTCTCTTGACGATTG ACGACGGGTGGGGAGGGGGAGATTTACCCTTTGCGGCGTTCAGCAATGTC ACAGGCGGTGCTTGCAAGCCTAGTGTGGACATTTTGTGCTCTGAAGGTTT TTATTGCACGTTTGCGCCGGGGACATGCGGATCGGAGACCGGGGAAGGAA TCTGTGTCGCCCAGCCTTCATCTTGCGTGCCAGACCCCTCCACGGCCCAC CCTGTGTGTGGATGTGATGGGCATTCATGGAGTACTGCGTGCAATGCAGC CATGGCGGGCGTATCGGTGAAAGCCGAGATGGATTGTCAACTTAACACTG CCACGCAAGTCACCTCCGGGGGCGTTTCTCGATTGGGAATCCGCCTGAGG GGATTGATGGCTGTGATAACGGTGGGTGGGATGGTGCTAGGAGCGGTCAT TCTGCTCTAG back to top
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