NO10G03090.1, NO10G03090.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G03090.1
Unique NameNO10G03090.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1981
Alignment locationchr10:856431..858839 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:856431..858839 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO10G03090.1 vs.
Match: EWM25526.1 (kazal-type serine protease inhibitor domain protein [Nannochloropsis gaditana])

HSP 1 Score: 723.4 bits (1866), Expect = 5.500e-205
Identity = 344/574 (59.93%), Postives = 426/574 (74.22%), Query Frame = 0
Query:    1 MKCYSVLVATAGLVSVVNGAEQACGTLLAPACPDGSFCSTVAGQCPVALGGLNSKGGVCKIMPDICTYEVEPVCGCDGKDYSNECEASAMGVSIAARGECTRGDTIGDLRPG---NTKGESDLPVAVAEVTGTSTTDCGGASDIKCAPEYVCIYQPGNECGVANGLGKCELAADMMCTAEYLPVCGCDNKTYSNACVAQYQVRVDVKHKGECKEDEETATAEIAEVVDKEEEADAISSNSGLFPIRDGGIINGAESANDT--DGPFSAHACNNNKDCGFNGYCYIQEGGCSSNNPVTEGVCTKKPLMCDSPPFTTVFTAVCGCDGTTYPTECYAQHAGVSILYRGACFKKGAPAPADSCGGKGIYTTACDKEGFYCQYQQGVCSLYDSLGSCSAKPETCTEEMDPVCGCDGRTFSNPCKASMAGISIKSKGECPLLTIDDGWGGGDLPFAAFSNVTGGACKPSVDILCSEGFYCTFAPGTCGSE-TGEGICVAQPSSCVPDPSTAHPVCGCDGHSWSTACNAAMAGVSVKAEMDCQLNTATQVTSGGVSRLGIRLRGLMAVITVGGMVLGAVIL 569
            M+  S++   AGLV V  GAEQ CGT LAP CPDGSFCST  G+C   LGGLN+KGG+CK+ PD+C   V+PVCGCDG DYSNECEA+  GVS+ ++G C +   + +LRPG   N +G+ D   + A + GTSTTDCGG + IKCAP++VCIY+ GNECG A G G CE   D+MC  +Y PVCGCD  TYSNACVAQYQ  V V+  G C ED    TA+IA+    ++  +         P  D  +I+GAE   +    G F  H C  +KDCG +GYC++QEGGCSS NP+TEGVC KKPL C+SPPFTT FTAVCGCDGTTYPTEC+A+ AG+SILYRGACF++G PAPADSCGGKG+Y   C+KEG+YC YQ+GVCSL+DSLG+C++KP  CT+E+DPVCGC+G+T+ N CKA+MAG SIKSKGECP +TIDDGWGGG L     +NVTGG CKPS  + CSEG+YCT+A G CGSE T EG+CV QP SCVPDPS+AH VCGCDGHSW+TAC+AAMAGV++KAE +C L  + QVTS  + R   R+ G+M ++TV G++LGA+ +
Sbjct:   12 MRTLSLIATAAGLVGVAYGAEQTCGTRLAPECPDGSFCSTGLGECTSLLGGLNTKGGMCKLKPDMCAQFVDPVCGCDGVDYSNECEANMKGVSVQSKGNCPKSGGLNNLRPGIGGNAEGDHD---STAAIYGTSTTDCGGPTAIKCAPDHVCIYEAGNECGKAEGSGHCEPTKDIMCMTDYTPVCGCDGTTYSNACVAQYQNGVPVRGPGTC-EDASEGTADIADTSGGQDVEE---------PAND--LIDGAEEVGEEREGGLFPTHKCTADKDCGLHGYCHVQEGGCSSKNPITEGVCAKKPLRCESPPFTTAFTAVCGCDGTTYPTECHARQAGMSILYRGACFRQGTPAPADSCGGKGLYAETCNKEGYYCLYQRGVCSLHDSLGTCTSKPAMCTQEIDPVCGCNGKTYDNACKAAMAGSSIKSKGECPFVTIDDGWGGGGLTIGLLANVTGGPCKPSAGLTCSEGYYCTYAAGVCGSEATAEGLCVVQPESCVPDPSSAHSVCGCDGHSWATACDAAMAGVALKAETECPL-VSVQVTSPAMHRYRGRVGGVMVMMTVFGILLGALAI 569          
The following BLAST results are available for this feature:
BLAST of NO10G03090.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25526.15.500e-20559.93kazal-type serine protease inhibitor domain protei... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G03090NO10G03090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G03090.1NO10G03090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G03090.1.cds1NO10G03090.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G03090.1.cds2NO10G03090.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G03090.1.cds3NO10G03090.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G03090.1 ID=NO10G03090.1|Name=NO10G03090.1|organism=Nannochloropsis oceanica|type=mRNA|length=1981bp
AAACACAGACAATTCTACATAAAAATGAAATGTTATTCTGTCCTGGTGGC
CACTGCTGGGCTGGTGAGCGTCGTTAATGGTGCAGAGCAAGCCTGCGGGA
CGTTGCTGGCCCCCGCTTGCCCTGATGGGTCCTTTTGCAGCACAGTGGCA
GGCCAGTGCCCAGTTGCATTGGGAGGGCTAAATAGCAAAGGAGGGGTCTG
CAAGATCATGCCGGACATATGCACATATGAAGTCGAACCCGTCTGCGGCT
GTGACGGCAAGGACTACTCTAACGAATGCGAGGCCAGCGCGATGGGTGTG
TCGATTGCGGCCAGAGGAGAATGCACAAGAGGTGACACAATCGGAGATCT
CCGTCCAGGCAATACAAAAGGCGAAAGCGACCTCCCCGTAGCTGTGGCTG
AGGTCACGGGCACGTCGACCACGGATTGCGGTGGGGCCTCTGACATCAAA
TGCGCACCTGAGTATGTTTGTATTTATCAGCCAGGAAACGAGTGTGGAGT
TGCCAATGGCCTGGGGAAGTGTGAGCTGGCTGCAGACATGATGTGCACGG
CCGAATATCTCCCCGTCTGCGGCTGTGACAACAAAACCTACAGCAACGCC
TGCGTGGCACAGTACCAAGTTAGAGTCGACGTGAAGCACAAAGGCGAATG
TAAAGAGGACGAGGAGACCGCAACCGCTGAGATTGCAGAAGTGGTAGACA
AAGAAGAAGAAGCAGACGCCATTAGCAGCAACAGCGGCCTCTTTCCTATC
CGCGACGGGGGGATTATCAATGGCGCAGAATCCGCGAATGACACGGATGG
CCCATTCTCTGCTCATGCGTGCAATAACAATAAGGACTGTGGGTTCAATG
GGTATTGCTACATCCAGGAGGGAGGATGTAGCAGCAATAATCCGGTGACT
GAAGGTGTGTGCACCAAGAAGCCTTTGATGTGCGATTCGCCACCTTTTAC
CACGGTGTTCACGGCGGTGTGTGGATGTGATGGCACAACGTACCCGACGG
AGTGCTACGCGCAGCATGCCGGCGTGAGTATTTTGTATCGGGGGGCCTGT
TTCAAGAAGGGGGCCCCGGCGCCAGCTGACAGTTGTGGGGGGAAGGGGAT
ATACACCACAGCCTGCGACAAGGAAGGGTTTTACTGTCAGTACCAGCAGG
GAGTCTGCAGCCTCTACGATAGTTTGGGCTCATGTTCGGCCAAGCCGGAG
ACTTGTACTGAGGAAATGGACCCTGTCTGTGGCTGTGATGGGCGCACGTT
CAGCAATCCTTGCAAGGCCTCCATGGCGGGAATTTCGATTAAGAGCAAGG
GAGAATGTCCTCTCTTGACGATTGACGACGGGTGGGGAGGGGGAGATTTA
CCCTTTGCGGCGTTCAGCAATGTCACAGGCGGTGCTTGCAAGCCTAGTGT
GGACATTTTGTGCTCTGAAGGTTTTTATTGCACGTTTGCGCCGGGGACAT
GCGGATCGGAGACCGGGGAAGGAATCTGTGTCGCCCAGCCTTCATCTTGC
GTGCCAGACCCCTCCACGGCCCACCCTGTGTGTGGATGTGATGGGCATTC
ATGGAGTACTGCGTGCAATGCAGCCATGGCGGGCGTATCGGTGAAAGCCG
AGATGGATTGTCAACTTAACACTGCCACGCAAGTCACCTCCGGGGGCGTT
TCTCGATTGGGAATCCGCCTGAGGGGATTGATGGCTGTGATAACGGTGGG
TGGGATGGTGCTAGGAGCGGTCATTCTGCTCTAGAAGAGAAATTGCGATG
AGAGGGTCGGTAGCAGAGGATGAACATTGCATGTTGTATGATCATCAGTG
GGAAAGAAAAGACAAGAGTGTACTAAAAGAGGTGGGAATTTGTGAAAGGA
GAAGCAGACAGTCGAACAAGAGAAGAGGTTGGGGCAGGATTTCCATGTTG
TTTTTATAGAAGGAATGATGGTGTAAGTATCTGTTTTTTTCTCTGTTGTG
TTCGTTTGTTTTCTTCGTTTGATGGTAGGGT
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protein sequence of NO10G03090.1

>NO10G03090.1-protein ID=NO10G03090.1-protein|Name=NO10G03090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=570bp
MKCYSVLVATAGLVSVVNGAEQACGTLLAPACPDGSFCSTVAGQCPVALG
GLNSKGGVCKIMPDICTYEVEPVCGCDGKDYSNECEASAMGVSIAARGEC
TRGDTIGDLRPGNTKGESDLPVAVAEVTGTSTTDCGGASDIKCAPEYVCI
YQPGNECGVANGLGKCELAADMMCTAEYLPVCGCDNKTYSNACVAQYQVR
VDVKHKGECKEDEETATAEIAEVVDKEEEADAISSNSGLFPIRDGGIING
AESANDTDGPFSAHACNNNKDCGFNGYCYIQEGGCSSNNPVTEGVCTKKP
LMCDSPPFTTVFTAVCGCDGTTYPTECYAQHAGVSILYRGACFKKGAPAP
ADSCGGKGIYTTACDKEGFYCQYQQGVCSLYDSLGSCSAKPETCTEEMDP
VCGCDGRTFSNPCKASMAGISIKSKGECPLLTIDDGWGGGDLPFAAFSNV
TGGACKPSVDILCSEGFYCTFAPGTCGSETGEGICVAQPSSCVPDPSTAH
PVCGCDGHSWSTACNAAMAGVSVKAEMDCQLNTATQVTSGGVSRLGIRLR
GLMAVITVGGMVLGAVILL*
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mRNA from alignment at chr10:856431..858839+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G03090.1 ID=NO10G03090.1|Name=NO10G03090.1|organism=Nannochloropsis oceanica|type=mRNA|length=2409bp|location=Sequence derived from alignment at chr10:856431..858839+ (Nannochloropsis oceanica)
AAACACAGACAATTCTACATAAAAATGAAATGTTATTCTGTCCTGGTGGC CACTGCTGGGCTGGTGAGCGTCGTTAATGGTGCAGAGCAAGCGTAAGTGC TGGAGTAGAAATCGTGTGTATGAGGAAGGCAGGGCGGAGGACGAGGAACT TACTCACCGTAGTACCACGTCTTGGCGTGAAGTTTTCTTTAGCGTAAACC AAAGCTATTTTTGACTCTAGGAGGACCCCGAGAGCAGTGATAAGTTCGGA AGATAGAGTCTATGCACTCACCCTCTCTTTTATCTACCCTATGTCACATT ACAGCTGCGGGACGTTGCTGGCCCCCGCTTGCCCTGATGGGTCCTTTTGC AGCACAGTGGCAGGCCAGTGCCCAGTTGCATTGGGAGGGCTAAATAGCAA AGGAGGGGTCTGCAAGATCATGCCGGACATATGCACATATGAAGTCGAAC CCGTCTGCGGCTGTGACGGCAAGGACTACTCTAACGAATGCGAGGCCAGC GCGATGGGTGTGTCGATTGCGGCCAGAGGAGAATGCACAAGAGGTGACAC AATCGGAGATCTCCGTCCAGGCAATACAAAAGGCGAAAGCGACCTCCCCG TAGCTGTGGCTGAGGTCACGGGCACGTCGACCACGGATTGCGGTGGGGCC TCTGACATCAAATGCGCACCTGAGTATGTTTGTATTTATCAGCCAGGAAA CGAGTGTGGAGTTGCCAATGGCCTGGGGAAGTGTGAGCTGGCTGCAGACA TGATGTGCACGGTAAGTGCTATTTGTGGGGGGAGGGAGAGTTGGAAATGG AAAGGAAGGTTTGCGTGTATGCATCGGTAAAAGCAGGCTCAAAATTTCAC CAATTAATACGAGTTTCATCCTTTTGAGCCTTACTCGTCTTTCTCCTTTC ATTCTCGAAATACGGATCTACTCATCCTCCTCCTTCCAATTCTCTATTTC TCCACTTCTCCCTCCCCCCTTGCCTAGGCCGAATATCTCCCCGTCTGCGG CTGTGACAACAAAACCTACAGCAACGCCTGCGTGGCACAGTACCAAGTTA GAGTCGACGTGAAGCACAAAGGCGAATGTAAAGAGGACGAGGAGACCGCA ACCGCTGAGATTGCAGAAGTGGTAGACAAAGAAGAAGAAGCAGACGCCAT TAGCAGCAACAGCGGCCTCTTTCCTATCCGCGACGGGGGGATTATCAATG GCGCAGAATCCGCGAATGACACGGATGGCCCATTCTCTGCTCATGCGTGC AATAACAATAAGGACTGTGGGTTCAATGGGTATTGCTACATCCAGGAGGG AGGATGTAGCAGCAATAATCCGGTGACTGAAGGTGTGTGCACCAAGAAGC CTTTGATGTGCGATTCGCCACCTTTTACCACGGTGTTCACGGCGGTGTGT GGATGTGATGGCACAACGTACCCGACGGAGTGCTACGCGCAGCATGCCGG CGTGAGTATTTTGTATCGGGGGGCCTGTTTCAAGAAGGGGGCCCCGGCGC CAGCTGACAGTTGTGGGGGGAAGGGGATATACACCACAGCCTGCGACAAG GAAGGGTTTTACTGTCAGTACCAGCAGGGAGTCTGCAGCCTCTACGATAG TTTGGGCTCATGTTCGGCCAAGCCGGAGACTTGTACTGAGGAAATGGACC CTGTCTGTGGCTGTGATGGGCGCACGTTCAGCAATCCTTGCAAGGCCTCC ATGGCGGGAATTTCGATTAAGAGCAAGGGAGAATGTCCTCTCTTGACGAT TGACGACGGGTGGGGAGGGGGAGATTTACCCTTTGCGGCGTTCAGCAATG TCACAGGCGGTGCTTGCAAGCCTAGTGTGGACATTTTGTGCTCTGAAGGT TTTTATTGCACGTTTGCGCCGGGGACATGCGGATCGGAGACCGGGGAAGG AATCTGTGTCGCCCAGCCTTCATCTTGCGTGCCAGACCCCTCCACGGCCC ACCCTGTGTGTGGATGTGATGGGCATTCATGGAGTACTGCGTGCAATGCA GCCATGGCGGGCGTATCGGTGAAAGCCGAGATGGATTGTCAACTTAACAC TGCCACGCAAGTCACCTCCGGGGGCGTTTCTCGATTGGGAATCCGCCTGA GGGGATTGATGGCTGTGATAACGGTGGGTGGGATGGTGCTAGGAGCGGTC ATTCTGCTCTAGAAGAGAAATTGCGATGAGAGGGTCGGTAGCAGAGGATG AACATTGCATGTTGTATGATCATCAGTGGGAAAGAAAAGACAAGAGTGTA CTAAAAGAGGTGGGAATTTGTGAAAGGAGAAGCAGACAGTCGAACAAGAG AAGAGGTTGGGGCAGGATTTCCATGTTGTTTTTATAGAAGGAATGATGGT GTAAGTATCTGTTTTTTTCTCTGTTGTGTTCGTTTGTTTTCTTCGTTTGA TGGTAGGGT
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Coding sequence (CDS) from alignment at chr10:856431..858839+

>NO10G03090.1 ID=NO10G03090.1|Name=NO10G03090.1|organism=Nannochloropsis oceanica|type=CDS|length=1710bp|location=Sequence derived from alignment at chr10:856431..858839+ (Nannochloropsis oceanica)
ATGAAATGTTATTCTGTCCTGGTGGCCACTGCTGGGCTGGTGAGCGTCGT
TAATGGTGCAGAGCAAGCCTGCGGGACGTTGCTGGCCCCCGCTTGCCCTG
ATGGGTCCTTTTGCAGCACAGTGGCAGGCCAGTGCCCAGTTGCATTGGGA
GGGCTAAATAGCAAAGGAGGGGTCTGCAAGATCATGCCGGACATATGCAC
ATATGAAGTCGAACCCGTCTGCGGCTGTGACGGCAAGGACTACTCTAACG
AATGCGAGGCCAGCGCGATGGGTGTGTCGATTGCGGCCAGAGGAGAATGC
ACAAGAGGTGACACAATCGGAGATCTCCGTCCAGGCAATACAAAAGGCGA
AAGCGACCTCCCCGTAGCTGTGGCTGAGGTCACGGGCACGTCGACCACGG
ATTGCGGTGGGGCCTCTGACATCAAATGCGCACCTGAGTATGTTTGTATT
TATCAGCCAGGAAACGAGTGTGGAGTTGCCAATGGCCTGGGGAAGTGTGA
GCTGGCTGCAGACATGATGTGCACGGCCGAATATCTCCCCGTCTGCGGCT
GTGACAACAAAACCTACAGCAACGCCTGCGTGGCACAGTACCAAGTTAGA
GTCGACGTGAAGCACAAAGGCGAATGTAAAGAGGACGAGGAGACCGCAAC
CGCTGAGATTGCAGAAGTGGTAGACAAAGAAGAAGAAGCAGACGCCATTA
GCAGCAACAGCGGCCTCTTTCCTATCCGCGACGGGGGGATTATCAATGGC
GCAGAATCCGCGAATGACACGGATGGCCCATTCTCTGCTCATGCGTGCAA
TAACAATAAGGACTGTGGGTTCAATGGGTATTGCTACATCCAGGAGGGAG
GATGTAGCAGCAATAATCCGGTGACTGAAGGTGTGTGCACCAAGAAGCCT
TTGATGTGCGATTCGCCACCTTTTACCACGGTGTTCACGGCGGTGTGTGG
ATGTGATGGCACAACGTACCCGACGGAGTGCTACGCGCAGCATGCCGGCG
TGAGTATTTTGTATCGGGGGGCCTGTTTCAAGAAGGGGGCCCCGGCGCCA
GCTGACAGTTGTGGGGGGAAGGGGATATACACCACAGCCTGCGACAAGGA
AGGGTTTTACTGTCAGTACCAGCAGGGAGTCTGCAGCCTCTACGATAGTT
TGGGCTCATGTTCGGCCAAGCCGGAGACTTGTACTGAGGAAATGGACCCT
GTCTGTGGCTGTGATGGGCGCACGTTCAGCAATCCTTGCAAGGCCTCCAT
GGCGGGAATTTCGATTAAGAGCAAGGGAGAATGTCCTCTCTTGACGATTG
ACGACGGGTGGGGAGGGGGAGATTTACCCTTTGCGGCGTTCAGCAATGTC
ACAGGCGGTGCTTGCAAGCCTAGTGTGGACATTTTGTGCTCTGAAGGTTT
TTATTGCACGTTTGCGCCGGGGACATGCGGATCGGAGACCGGGGAAGGAA
TCTGTGTCGCCCAGCCTTCATCTTGCGTGCCAGACCCCTCCACGGCCCAC
CCTGTGTGTGGATGTGATGGGCATTCATGGAGTACTGCGTGCAATGCAGC
CATGGCGGGCGTATCGGTGAAAGCCGAGATGGATTGTCAACTTAACACTG
CCACGCAAGTCACCTCCGGGGGCGTTTCTCGATTGGGAATCCGCCTGAGG
GGATTGATGGCTGTGATAACGGTGGGTGGGATGGTGCTAGGAGCGGTCAT
TCTGCTCTAG
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Synonyms
Publications