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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr10 | genome | chr10:744163..746124 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO10G02710.1 vs.
Match: EWM25484.1 (aspartyl aminopeptidase [Nannochloropsis gaditana]) HSP 1 Score: 604.4 bits (1557), Expect = 3.400e-169 Identity = 317/439 (72.21%), Postives = 355/439 (80.87%), Query Frame = 0
Query: 10 PCSTEEQDIVDGLITFLNEAWTSFHAVHASAMRLRAAGFIELQEGAPWSLAAGGKYFFTRNMTTIVAFAVGRHFNPAQQ--QSVSGFTIIGAHTDSPCPKLKPVSKLTKSGYLALSVVGYGGGLWHTWFDRDLTLAGRVLVRRPDGRTTAKLVRIDRPILRIPNLAIHLQSDEERRGFAPNLQTQFPPMLASEVKAQLLAAATTAAATTADEKKKKEEKVGDKEEKGGVESKKLKTEPQWASPDQQHHPLLLQLLAEEL--GVSVESIVDMEMQLCDIQPSVVGGALHEFIFSGRLDNLASSYQALTALIHSCQAPGALDEEVNVRLVALFDHEEIGSMSAQGAASSLLPEVLRRITATVIGAPTG-GAAALEDALAQALRRSFIVSADMAHALHPNYDSKHDPGLAPKMHGGLVLKHNVNQRYATNAVTAHVFRELGR 444
P EE+DIVDGLITFLNEAWT FHAV A+A RLR AGF EL+EG W L AGGKY+FTRNMTT++AFAVG F Q Q SGFTIIGAHTDSPCPKLKPVSKLTKSGYL+LSVVGYGGGLWHTWFDRDL+LAGRVLVR P+G T+A+LVRI+RPI+RIPNLAIHLQSDEERRGFAPNLQT FPP+LASE+KAQL A A +EK K+ EE+ QW QQHHPLLL++LAE L GV+ ESI+D E+QLCD QPSVVGGAL EF++SGRLDNLASSYQALTALIHS QA G L+ E NVRLVALFDHEE+GS+SAQGAASSLLP++LRRI AT P+G +A ED +A+ L RSFIVSADMAHALHPNY+SKHDPGLAP+MHGGLVLKHNVNQRYATNAV+AH+FREL R
Sbjct: 6 PTPAEEKDIVDGLITFLNEAWTPFHAVQAAASRLRDAGFKELREGDAWGLKAGGKYYFTRNMTTLIAFAVGNKFQICQHSGQGGSGFTIIGAHTDSPCPKLKPVSKLTKSGYLSLSVVGYGGGLWHTWFDRDLSLAGRVLVRDPEGSTSARLVRIERPIVRIPNLAIHLQSDEERRGFAPNLQTHFPPVLASEIKAQLEATTHETGAQNVEEKSKQATSAVKAEEE------------QWPPMSQQHHPLLLKMLAEALGEGVAAESILDFELQLCDTQPSVVGGALREFVYSGRLDNLASSYQALTALIHSTQAAGTLNFETNVRLVALFDHEEVGSVSAQGAASSLLPDILRRIMATY---PSGLVRSASEDEMARILHRSFIVSADMAHALHPNYESKHDPGLAPRMHGGLVLKHNVNQRYATNAVSAHIFRELAR 429
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO10G02710.1 ID=NO10G02710.1|Name=NO10G02710.1|organism=Nannochloropsis oceanica|type=mRNA|length=1962bp
TATGACCCCAGAGGCCCGAGGGGAGCCACGCTGCGTGTTATTCCATTGAA
AATTGTGTAAAGTAGACCCGAAATTCATATGTTTCAAAATTTGTTCACTT
CTGTAGTCCCGCGATGTCAGTTGGTGGATGTCTTCATCTCTGACTGTATC
CAGAGTGTTTGTCGTGAACTAGCCACCGTCCAGTCTTTTCTATTCAGTTC
TGCCGAGCCAAAATCTGAATCGTCTTTCTGTGCCCCTGCCACCCGGACGC
CTCTGCCCCACATCATCTTGTCCTCCATGTTTCTCTTTCCTACCACAGGC
AGCCGTTAAAGCATGACCTCCACCCCCGTCGCCGCCACCCCCTGCTCCAC
CGAAGAACAAGACATTGTCGACGGGCTTATCACCTTCTTGAACGAGGCGT
GGACATCGTTCCACGCCGTGCACGCCTCTGCCATGCGCTTGCGGGCGGCC
GGCTTCATCGAGCTGCAGGAGGGGGCCCCCTGGTCATTGGCTGCTGGGGG
CAAATACTTTTTTACCCGGAACATGACGACCATCGTGGCCTTCGCTGTGG
GCAGGCACTTCAATCCAGCGCAGCAGCAAAGTGTGAGTGGCTTTACCATT
ATTGGCGCTCACACAGATTCACCGTGTCCGAAGCTCAAGCCTGTGTCCAA
ACTTACTAAGAGTGGGTACCTCGCTTTGAGTGTGGTAGGGTACGGCGGGG
GGCTCTGGCACACGTGGTTCGATCGCGACTTGACCTTGGCCGGGCGCGTC
TTGGTGCGGCGACCTGATGGGCGGACGACGGCGAAATTGGTACGGATTGA
TCGACCTATCCTACGCATTCCCAACCTGGCGATACATCTGCAGTCGGATG
AGGAACGTCGTGGGTTTGCTCCGAACCTACAGACACAGTTTCCTCCCATG
CTCGCTTCGGAAGTGAAGGCGCAGCTGCTGGCAGCGGCGACGACAGCTGC
AGCAACGACGGCGGATGAAAAAAAGAAGAAGGAAGAGAAAGTTGGGGACA
AGGAGGAGAAAGGCGGTGTGGAGAGCAAGAAGCTAAAGACAGAGCCGCAG
TGGGCGTCTCCGGATCAGCAGCATCACCCGTTGCTCTTGCAGCTTCTGGC
GGAGGAATTGGGGGTGTCGGTAGAAAGTATCGTGGACATGGAGATGCAGC
TGTGTGACATCCAGCCCAGTGTCGTGGGTGGGGCATTGCATGAGTTCATT
TTCAGCGGAAGGTTGGATAACCTCGCTTCGTCTTACCAGGCATTGACGGC
ATTGATTCACAGTTGCCAAGCCCCGGGGGCACTCGACGAGGAGGTGAATG
TTCGATTGGTTGCCTTGTTTGACCACGAAGAGATTGGGAGTATGTCTGCC
CAAGGTGCAGCATCTTCATTGCTGCCTGAAGTTCTGCGCCGCATCACTGC
TACTGTCATCGGTGCCCCTACAGGAGGAGCAGCTGCTTTGGAGGACGCCC
TCGCGCAGGCCCTCCGTCGGTCCTTCATCGTTTCTGCGGATATGGCTCAT
GCCCTGCACCCTAATTATGACAGCAAGCACGATCCAGGATTGGCGCCCAA
AATGCATGGCGGGTTGGTTCTCAAACATAATGTGAATCAACGCTACGCCA
CAAATGCCGTGACTGCTCACGTGTTCCGAGAATTGGGCCGACGGTTCGCG
AAGGTGCCTTTCCAAGAGTTTGCTGTGAAGGCTGACTCGAGGTGTGGGAG
CACGATCGGGCCTTTGGTGGCGGGATTGACGGGGGTGTTGACGGTGGATG
TCGGGAGTCCACAATGGGCGATGCACAGTGTGAGAGAGACGATGGCGACC
AGTGATGTCTGGTATGGGTTTTTGCACTTCAAGGCTGTCTTGGAAAGCTT
TCCGGTGGTTGCCAAGGAGTGTGCGGAGGCAATGGAGAGGTAGATAGAGA
AGGAGAGTTGTGGAGGAGGAGGATGGGGCAACGGGACGATGGAAGAAAAA
GAAATGGTAGAA back to topprotein sequence of NO10G02710.1 >NO10G02710.1-protein ID=NO10G02710.1-protein|Name=NO10G02710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=527bp
MTSTPVAATPCSTEEQDIVDGLITFLNEAWTSFHAVHASAMRLRAAGFIE
LQEGAPWSLAAGGKYFFTRNMTTIVAFAVGRHFNPAQQQSVSGFTIIGAH
TDSPCPKLKPVSKLTKSGYLALSVVGYGGGLWHTWFDRDLTLAGRVLVRR
PDGRTTAKLVRIDRPILRIPNLAIHLQSDEERRGFAPNLQTQFPPMLASE
VKAQLLAAATTAAATTADEKKKKEEKVGDKEEKGGVESKKLKTEPQWASP
DQQHHPLLLQLLAEELGVSVESIVDMEMQLCDIQPSVVGGALHEFIFSGR
LDNLASSYQALTALIHSCQAPGALDEEVNVRLVALFDHEEIGSMSAQGAA
SSLLPEVLRRITATVIGAPTGGAAALEDALAQALRRSFIVSADMAHALHP
NYDSKHDPGLAPKMHGGLVLKHNVNQRYATNAVTAHVFRELGRRFAKVPF
QEFAVKADSRCGSTIGPLVAGLTGVLTVDVGSPQWAMHSVRETMATSDVW
YGFLHFKAVLESFPVVAKECAEAMER* back to topmRNA from alignment at chr10:744163..746124- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO10G02710.1 ID=NO10G02710.1|Name=NO10G02710.1|organism=Nannochloropsis oceanica|type=mRNA|length=1962bp|location=Sequence derived from alignment at chr10:744163..746124- (Nannochloropsis oceanica)
TATGACCCCAGAGGCCCGAGGGGAGCCACGCTGCGTGTTATTCCATTGAA
AATTGTGTAAAGTAGACCCGAAATTCATATGTTTCAAAATTTGTTCACTT
CTGTAGTCCCGCGATGTCAGTTGGTGGATGTCTTCATCTCTGACTGTATC
CAGAGTGTTTGTCGTGAACTAGCCACCGTCCAGTCTTTTCTATTCAGTTC
TGCCGAGCCAAAATCTGAATCGTCTTTCTGTGCCCCTGCCACCCGGACGC
CTCTGCCCCACATCATCTTGTCCTCCATGTTTCTCTTTCCTACCACAGGC
AGCCGTTAAAGCATGACCTCCACCCCCGTCGCCGCCACCCCCTGCTCCAC
CGAAGAACAAGACATTGTCGACGGGCTTATCACCTTCTTGAACGAGGCGT
GGACATCGTTCCACGCCGTGCACGCCTCTGCCATGCGCTTGCGGGCGGCC
GGCTTCATCGAGCTGCAGGAGGGGGCCCCCTGGTCATTGGCTGCTGGGGG
CAAATACTTTTTTACCCGGAACATGACGACCATCGTGGCCTTCGCTGTGG
GCAGGCACTTCAATCCAGCGCAGCAGCAAAGTGTGAGTGGCTTTACCATT
ATTGGCGCTCACACAGATTCACCGTGTCCGAAGCTCAAGCCTGTGTCCAA
ACTTACTAAGAGTGGGTACCTCGCTTTGAGTGTGGTAGGGTACGGCGGGG
GGCTCTGGCACACGTGGTTCGATCGCGACTTGACCTTGGCCGGGCGCGTC
TTGGTGCGGCGACCTGATGGGCGGACGACGGCGAAATTGGTACGGATTGA
TCGACCTATCCTACGCATTCCCAACCTGGCGATACATCTGCAGTCGGATG
AGGAACGTCGTGGGTTTGCTCCGAACCTACAGACACAGTTTCCTCCCATG
CTCGCTTCGGAAGTGAAGGCGCAGCTGCTGGCAGCGGCGACGACAGCTGC
AGCAACGACGGCGGATGAAAAAAAGAAGAAGGAAGAGAAAGTTGGGGACA
AGGAGGAGAAAGGCGGTGTGGAGAGCAAGAAGCTAAAGACAGAGCCGCAG
TGGGCGTCTCCGGATCAGCAGCATCACCCGTTGCTCTTGCAGCTTCTGGC
GGAGGAATTGGGGGTGTCGGTAGAAAGTATCGTGGACATGGAGATGCAGC
TGTGTGACATCCAGCCCAGTGTCGTGGGTGGGGCATTGCATGAGTTCATT
TTCAGCGGAAGGTTGGATAACCTCGCTTCGTCTTACCAGGCATTGACGGC
ATTGATTCACAGTTGCCAAGCCCCGGGGGCACTCGACGAGGAGGTGAATG
TTCGATTGGTTGCCTTGTTTGACCACGAAGAGATTGGGAGTATGTCTGCC
CAAGGTGCAGCATCTTCATTGCTGCCTGAAGTTCTGCGCCGCATCACTGC
TACTGTCATCGGTGCCCCTACAGGAGGAGCAGCTGCTTTGGAGGACGCCC
TCGCGCAGGCCCTCCGTCGGTCCTTCATCGTTTCTGCGGATATGGCTCAT
GCCCTGCACCCTAATTATGACAGCAAGCACGATCCAGGATTGGCGCCCAA
AATGCATGGCGGGTTGGTTCTCAAACATAATGTGAATCAACGCTACGCCA
CAAATGCCGTGACTGCTCACGTGTTCCGAGAATTGGGCCGACGGTTCGCG
AAGGTGCCTTTCCAAGAGTTTGCTGTGAAGGCTGACTCGAGGTGTGGGAG
CACGATCGGGCCTTTGGTGGCGGGATTGACGGGGGTGTTGACGGTGGATG
TCGGGAGTCCACAATGGGCGATGCACAGTGTGAGAGAGACGATGGCGACC
AGTGATGTCTGGTATGGGTTTTTGCACTTCAAGGCTGTCTTGGAAAGCTT
TCCGGTGGTTGCCAAGGAGTGTGCGGAGGCAATGGAGAGGTAGATAGAGA
AGGAGAGTTGTGGAGGAGGAGGATGGGGCAACGGGACGATGGAAGAAAAA
GAAATGGTAGAA back to topCoding sequence (CDS) from alignment at chr10:744163..746124- >NO10G02710.1 ID=NO10G02710.1|Name=NO10G02710.1|organism=Nannochloropsis oceanica|type=CDS|length=1581bp|location=Sequence derived from alignment at chr10:744163..746124- (Nannochloropsis oceanica)
ATGACCTCCACCCCCGTCGCCGCCACCCCCTGCTCCACCGAAGAACAAGA
CATTGTCGACGGGCTTATCACCTTCTTGAACGAGGCGTGGACATCGTTCC
ACGCCGTGCACGCCTCTGCCATGCGCTTGCGGGCGGCCGGCTTCATCGAG
CTGCAGGAGGGGGCCCCCTGGTCATTGGCTGCTGGGGGCAAATACTTTTT
TACCCGGAACATGACGACCATCGTGGCCTTCGCTGTGGGCAGGCACTTCA
ATCCAGCGCAGCAGCAAAGTGTGAGTGGCTTTACCATTATTGGCGCTCAC
ACAGATTCACCGTGTCCGAAGCTCAAGCCTGTGTCCAAACTTACTAAGAG
TGGGTACCTCGCTTTGAGTGTGGTAGGGTACGGCGGGGGGCTCTGGCACA
CGTGGTTCGATCGCGACTTGACCTTGGCCGGGCGCGTCTTGGTGCGGCGA
CCTGATGGGCGGACGACGGCGAAATTGGTACGGATTGATCGACCTATCCT
ACGCATTCCCAACCTGGCGATACATCTGCAGTCGGATGAGGAACGTCGTG
GGTTTGCTCCGAACCTACAGACACAGTTTCCTCCCATGCTCGCTTCGGAA
GTGAAGGCGCAGCTGCTGGCAGCGGCGACGACAGCTGCAGCAACGACGGC
GGATGAAAAAAAGAAGAAGGAAGAGAAAGTTGGGGACAAGGAGGAGAAAG
GCGGTGTGGAGAGCAAGAAGCTAAAGACAGAGCCGCAGTGGGCGTCTCCG
GATCAGCAGCATCACCCGTTGCTCTTGCAGCTTCTGGCGGAGGAATTGGG
GGTGTCGGTAGAAAGTATCGTGGACATGGAGATGCAGCTGTGTGACATCC
AGCCCAGTGTCGTGGGTGGGGCATTGCATGAGTTCATTTTCAGCGGAAGG
TTGGATAACCTCGCTTCGTCTTACCAGGCATTGACGGCATTGATTCACAG
TTGCCAAGCCCCGGGGGCACTCGACGAGGAGGTGAATGTTCGATTGGTTG
CCTTGTTTGACCACGAAGAGATTGGGAGTATGTCTGCCCAAGGTGCAGCA
TCTTCATTGCTGCCTGAAGTTCTGCGCCGCATCACTGCTACTGTCATCGG
TGCCCCTACAGGAGGAGCAGCTGCTTTGGAGGACGCCCTCGCGCAGGCCC
TCCGTCGGTCCTTCATCGTTTCTGCGGATATGGCTCATGCCCTGCACCCT
AATTATGACAGCAAGCACGATCCAGGATTGGCGCCCAAAATGCATGGCGG
GTTGGTTCTCAAACATAATGTGAATCAACGCTACGCCACAAATGCCGTGA
CTGCTCACGTGTTCCGAGAATTGGGCCGACGGTTCGCGAAGGTGCCTTTC
CAAGAGTTTGCTGTGAAGGCTGACTCGAGGTGTGGGAGCACGATCGGGCC
TTTGGTGGCGGGATTGACGGGGGTGTTGACGGTGGATGTCGGGAGTCCAC
AATGGGCGATGCACAGTGTGAGAGAGACGATGGCGACCAGTGATGTCTGG
TATGGGTTTTTGCACTTCAAGGCTGTCTTGGAAAGCTTTCCGGTGGTTGC
CAAGGAGTGTGCGGAGGCAATGGAGAGGTAG back to top
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