NO10G02670.1, NO10G02670.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G02670.1
Unique NameNO10G02670.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2083
Alignment locationchr10:729940..732339 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:729940..732339 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G02670.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02670NO10G02670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G02670.1NO10G02670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G02670.1.cds1NO10G02670.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G02670.1.cds2NO10G02670.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G02670.1.cds3NO10G02670.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G02670.1 ID=NO10G02670.1|Name=NO10G02670.1|organism=Nannochloropsis oceanica|type=mRNA|length=2083bp
ATGCGGTGGGCTACGGGGAGTGTGTGGGAGCGTGTGTGTTTCCCTGTGGC
CTTGCTTCCATCGTCTATCGTCCACCCAAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCCGCTGCCGCATTAGCAGCACTAGCCTCGAC
CATACAGAACCTTATTACTCTGTCATTCCTCCCTTACACGGCACGCCTTT
ACGAATGGCATTGAGCTTTTACGGTGCCAAGGTGAAGGTCGGTCAACCGG
CCAGCTGGAAAACTCCCCAAGGATACGTTTGCACACTCAGCAACGTGGCC
TTGGAGGTCGAAAGCAACAAAACTGATGGCCTCGATGGGATCGGCGTGCC
GCATCGCGTGTATTTAACCACGAAGGACTGGGAAGACAAAGAAATGAAAT
GCCTGATTGCTTCCTTGCGGGCTCGGCAGACCGAGCAGATTCATTTAGAG
GTGGTGTTAGGGTGGGATAGCCCCTTTGAATTATCGGTGGAGGGAGGGAA
GGGCGTTGTGCATATCACGGGATTCGTGCAGCCAGGACCGTCGTTTGGAG
GGGATGAGGATGAGGATGAGGATGACGAGGATTTGGGGGCGTTGCTCGAA
GACGAAGACGAAGAGGATGATGATGATGATGACGATGATGATGGTGAAGA
TGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATG
GTGATGAAGAGGAGGAAGAAAGCGTGGCTGGTGAGGAGGAGGAGGGAGAG
GATGAAGAAGAGGAGGGGGAGGGGGAGGCGCTCGACGCGTTGAAAAGGAA
GGCCGAAAGTAGCAGCGAAGATGAGGAGGAGGACGAAGGGGAGGAGATGG
AAGACGCGGACTTGCTCAAATTGAAAGGTCTGCAGAAGCGCATAGCAGCA
GCTGCTTCTGCGAATCCCAAGAAAAAGGAGAAAATGGGGGGAAAGAAAGT
GAGTAATAGTAGCGGCAGCAGCAGCAGCAGCAGTGAGGACGAGGGGGAGG
AGGTGGAGACGAAGTTGCCGAAATCAAGACTTGCACCGAAGCTTGCGGCG
AGAAAAAAGCAGGGGGAAGGTGGGAAGAAGGGAAGCATCAGCAGCAGCGG
CAGCAGCAGTACGACTGGAGGAGAGAGCGATGATGAAGAGGGGAAGGATG
GGAGAGATACAATGGATGTGGAGGGAGGAGATGGGGATATGGTCAAAAAC
GTTTCGTCAAAGAAGCAATTTGGAGTAGGAGTAGGAGGAGGAGGAGGAGG
AGGAGGATTAGAGGGAGGGAACAAGCGCAAGCTTCCTATCCCTAGCCCTA
GTGGCTCTCCGCACAATGGCGGTGGAGGAAGAGAAGGGAAAGGTGGAGGG
GAAAGGGGCTCACCTGGAGGGTGGGGGGGGCATGGAGGAGAAGGAGGAGG
TCGCAGAGGAAGAGGAGGAGGGAGAGGGGTGGGGGCAGGAGGGTTTGAGA
GAGGGAGGGGTGGAGGACGAGGGGGAGGACGAGGACGAGGGAGGGAGGGG
TTTGGTAAGAGGCAGAGGAATTAGAAATTGATAATGAGCGGGGGGGAAGT
GAGGGAGGACAGGGAAAGTGCAGAGGAGTATATTGATTAGAGATAGCAAT
AGCATAAGATGACCGAGGAGGAGAAGGAGAAGGTAATTAGCAACAGGTCG
GCTGTACGGCCAATATTTTTCTAGAGTGGTATACATATATTTTCTCGGGA
GAAGGAAGAAGGATTAGTAGAAGGTAGAAAAGAAGAAGGTGGCGCCTTTA
GTGGCTTACTTTAATTCGGAAAGACGCCCTTTTGCGTGTATTTGTTTAAT
TCTGTGTGTCTGTCTGTCTCTCTGTCTCTCTGTCTCTGTGACTCTCTATG
TGTTGTGTCTGTGTGTGTGTCTGTCTGTGTGTGTCTGTTTGTGTCTGTGA
CTGTGTGTGTGTTCCTTCGTGATTGTGTTTGTGTCTGTGTCTACATATCT
GTCTGTCTGATAGTGGGATAGGTAGGAGGAAGAGAAAAAGAACAGGGAGG
AGATAGGGACAACAGCCAATATTTTGCTTATAGAAAACATTTCAACAGAC
ACCTTTTGCCCAGGCATGCACAGAAAGCCAAAG
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protein sequence of NO10G02670.1

>NO10G02670.1-protein ID=NO10G02670.1-protein|Name=NO10G02670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=508bp
MRWATGSVWERVCFPVALLPSSIVHPSSSSSSSSSSSSSSRCRISSTSLD
HTEPYYSVIPPLHGTPLRMALSFYGAKVKVGQPASWKTPQGYVCTLSNVA
LEVESNKTDGLDGIGVPHRVYLTTKDWEDKEMKCLIASLRARQTEQIHLE
VVLGWDSPFELSVEGGKGVVHITGFVQPGPSFGGDEDEDEDDEDLGALLE
DEDEEDDDDDDDDDGEDEEEEEEEEEEEEEEEDGDEEEEESVAGEEEEGE
DEEEEGEGEALDALKRKAESSSEDEEEDEGEEMEDADLLKLKGLQKRIAA
AASANPKKKEKMGGKKVSNSSGSSSSSSEDEGEEVETKLPKSRLAPKLAA
RKKQGEGGKKGSISSSGSSSTTGGESDDEEGKDGRDTMDVEGGDGDMVKN
VSSKKQFGVGVGGGGGGGGLEGGNKRKLPIPSPSGSPHNGGGGREGKGGG
ERGSPGGWGGHGGEGGGRRGRGGGRGVGAGGFERGRGGGRGGGRGRGREG
FGKRQRN*
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mRNA from alignment at chr10:729940..732339-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G02670.1 ID=NO10G02670.1|Name=NO10G02670.1|organism=Nannochloropsis oceanica|type=mRNA|length=2400bp|location=Sequence derived from alignment at chr10:729940..732339- (Nannochloropsis oceanica)
ATGCGGTGGGCTACGGGGAGTGTGTGGGAGCGTGTGTGGTATCAGAGGCT
GGGTGGATAATTAATGTGAATGACAGGAAACAAAGCAAAGGAGACGGCCA
GCCGCACAGACCGCGCCGTTGGTTATTCGCCTCCCCACCCCTCCTCTTCC
TTCGCAGCCATGTCCGCCTGACCAAATGAATTATGGGCACAAACCCACAC
TGTCCACACAGCACCTCGACAGGAAAGTTCTTTCGTCAAACGAGCGACTT
TCTGGAAGCGGTGCAGTTTCCCTGTGGCCTTGCTTCCATCGTCTATCGTC
CACCCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCG
CTGCCGCATTAGCAGCACTAGCCTCGACCATACAGAACCTTATTACTCTG
TCATTCCTCCCTTACACGGCACGCCTTTACGAATGGCATTGAGCTTTTAC
GGTACGTTCTCTCCTACCCCCCTTCTTTGGCCCCTTGTTGTCCTGTCCGT
CGTCCTCGTCCCCTGAACGCCTTTCCTGCTCCTCTTCCAGGTGCCAAGGT
GAAGGTCGGTCAACCGGCCAGCTGGAAAACTCCCCAAGGATACGTTTGCA
CACTCAGCAACGTGGCCTTGGAGGTCGAAAGCAACAAAACTGATGGCCTC
GATGGGATCGGCGTGCCGCATCGCGTGTATTTAACCACGAAGGACTGGGA
AGACAAAGAAATGAAATGCCTGATTGCTTCCTTGCGGGCTCGGCAGACCG
AGCAGATTCATTTAGAGGTGGTGTTAGGGTGGGATAGCCCCTTTGAATTA
TCGGTGGAGGGAGGGAAGGGCGTTGTGCATATCACGGGATTCGTGCAGCC
AGGACCGTCGTTTGGAGGGGATGAGGATGAGGATGAGGATGACGAGGATT
TGGGGGCGTTGCTCGAAGACGAAGACGAAGAGGATGATGATGATGATGAC
GATGATGATGGTGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA
AGAAGAAGAAGAAGATGGTGATGAAGAGGAGGAAGAAAGCGTGGCTGGTG
AGGAGGAGGAGGGAGAGGATGAAGAAGAGGAGGGGGAGGGGGAGGCGCTC
GACGCGTTGAAAAGGAAGGCCGAAAGTAGCAGCGAAGATGAGGAGGAGGA
CGAAGGGGAGGAGATGGAAGACGCGGACTTGCTCAAATTGAAAGGTCTGC
AGAAGCGCATAGCAGCAGCTGCTTCTGCGAATCCCAAGAAAAAGGAGAAA
ATGGGGGGAAAGAAAGTGAGTAATAGTAGCGGCAGCAGCAGCAGCAGCAG
TGAGGACGAGGGGGAGGAGGTGGAGACGAAGTTGCCGAAATCAAGACTTG
CACCGAAGCTTGCGGCGAGAAAAAAGCAGGGGGAAGGTGGGAAGAAGGGA
AGCATCAGCAGCAGCGGCAGCAGCAGTACGACTGGAGGAGAGAGCGATGA
TGAAGAGGGGAAGGATGGGAGAGATACAATGGATGTGGAGGGAGGAGATG
GGGATATGGTCAAAAACGTTTCGTCAAAGAAGCAATTTGGAGTAGGAGTA
GGAGGAGGAGGAGGAGGAGGAGGATTAGAGGGAGGGAACAAGCGCAAGCT
TCCTATCCCTAGCCCTAGTGGCTCTCCGCACAATGGCGGTGGAGGAAGAG
AAGGGAAAGGTGGAGGGGAAAGGGGCTCACCTGGAGGGTGGGGGGGGCAT
GGAGGAGAAGGAGGAGGTCGCAGAGGAAGAGGAGGAGGGAGAGGGGTGGG
GGCAGGAGGGTTTGAGAGAGGGAGGGGTGGAGGACGAGGGGGAGGACGAG
GACGAGGGAGGGAGGGGTTTGGTAAGAGGCAGAGGAATTAGAAATTGATA
ATGAGCGGGGGGGAAGTGAGGGAGGACAGGGAAAGTGCAGAGGAGTATAT
TGATTAGAGATAGCAATAGCATAAGATGACCGAGGAGGAGAAGGAGAAGG
TAATTAGCAACAGGTCGGCTGTACGGCCAATATTTTTCTAGAGTGGTATA
CATATATTTTCTCGGGAGAAGGAAGAAGGATTAGTAGAAGGTAGAAAAGA
AGAAGGTGGCGCCTTTAGTGGCTTACTTTAATTCGGAAAGACGCCCTTTT
GCGTGTATTTGTTTAATTCTGTGTGTCTGTCTGTCTCTCTGTCTCTCTGT
CTCTGTGACTCTCTATGTGTTGTGTCTGTGTGTGTGTCTGTCTGTGTGTG
TCTGTTTGTGTCTGTGACTGTGTGTGTGTTCCTTCGTGATTGTGTTTGTG
TCTGTGTCTACATATCTGTCTGTCTGATAGTGGGATAGGTAGGAGGAAGA
GAAAAAGAACAGGGAGGAGATAGGGACAACAGCCAATATTTTGCTTATAG
AAAACATTTCAACAGACACCTTTTGCCCAGGCATGCACAGAAAGCCAAAG
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Coding sequence (CDS) from alignment at chr10:729940..732339-

>NO10G02670.1 ID=NO10G02670.1|Name=NO10G02670.1|organism=Nannochloropsis oceanica|type=CDS|length=1524bp|location=Sequence derived from alignment at chr10:729940..732339- (Nannochloropsis oceanica)
ATGCGGTGGGCTACGGGGAGTGTGTGGGAGCGTGTGTGTTTCCCTGTGGC
CTTGCTTCCATCGTCTATCGTCCACCCAAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCCGCTGCCGCATTAGCAGCACTAGCCTCGAC
CATACAGAACCTTATTACTCTGTCATTCCTCCCTTACACGGCACGCCTTT
ACGAATGGCATTGAGCTTTTACGGTGCCAAGGTGAAGGTCGGTCAACCGG
CCAGCTGGAAAACTCCCCAAGGATACGTTTGCACACTCAGCAACGTGGCC
TTGGAGGTCGAAAGCAACAAAACTGATGGCCTCGATGGGATCGGCGTGCC
GCATCGCGTGTATTTAACCACGAAGGACTGGGAAGACAAAGAAATGAAAT
GCCTGATTGCTTCCTTGCGGGCTCGGCAGACCGAGCAGATTCATTTAGAG
GTGGTGTTAGGGTGGGATAGCCCCTTTGAATTATCGGTGGAGGGAGGGAA
GGGCGTTGTGCATATCACGGGATTCGTGCAGCCAGGACCGTCGTTTGGAG
GGGATGAGGATGAGGATGAGGATGACGAGGATTTGGGGGCGTTGCTCGAA
GACGAAGACGAAGAGGATGATGATGATGATGACGATGATGATGGTGAAGA
TGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATG
GTGATGAAGAGGAGGAAGAAAGCGTGGCTGGTGAGGAGGAGGAGGGAGAG
GATGAAGAAGAGGAGGGGGAGGGGGAGGCGCTCGACGCGTTGAAAAGGAA
GGCCGAAAGTAGCAGCGAAGATGAGGAGGAGGACGAAGGGGAGGAGATGG
AAGACGCGGACTTGCTCAAATTGAAAGGTCTGCAGAAGCGCATAGCAGCA
GCTGCTTCTGCGAATCCCAAGAAAAAGGAGAAAATGGGGGGAAAGAAAGT
GAGTAATAGTAGCGGCAGCAGCAGCAGCAGCAGTGAGGACGAGGGGGAGG
AGGTGGAGACGAAGTTGCCGAAATCAAGACTTGCACCGAAGCTTGCGGCG
AGAAAAAAGCAGGGGGAAGGTGGGAAGAAGGGAAGCATCAGCAGCAGCGG
CAGCAGCAGTACGACTGGAGGAGAGAGCGATGATGAAGAGGGGAAGGATG
GGAGAGATACAATGGATGTGGAGGGAGGAGATGGGGATATGGTCAAAAAC
GTTTCGTCAAAGAAGCAATTTGGAGTAGGAGTAGGAGGAGGAGGAGGAGG
AGGAGGATTAGAGGGAGGGAACAAGCGCAAGCTTCCTATCCCTAGCCCTA
GTGGCTCTCCGCACAATGGCGGTGGAGGAAGAGAAGGGAAAGGTGGAGGG
GAAAGGGGCTCACCTGGAGGGTGGGGGGGGCATGGAGGAGAAGGAGGAGG
TCGCAGAGGAAGAGGAGGAGGGAGAGGGGTGGGGGCAGGAGGGTTTGAGA
GAGGGAGGGGTGGAGGACGAGGGGGAGGACGAGGACGAGGGAGGGAGGGG
TTTGGTAAGAGGCAGAGGAATTAG
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Synonyms
Publications