NO10G02620.1, NO10G02620.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G02620.1
Unique NameNO10G02620.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4390
Alignment locationchr10:715449..719838 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:715449..719838 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO10G02620.1 vs.
Match: EWM25478.1 (tubulin-specific chaperone d [Nannochloropsis gaditana])

HSP 1 Score: 1399.4 bits (3621), Expect = 0.000e+0
Identity = 829/1480 (56.01%), Postives = 985/1480 (66.55%), Query Frame = 0
Query:    2 DDSTRTEGGGECDYEEASCESTHFVEQAEVLRRLEVLAGPTPPESITGELEWLQKVLDKYQEQSTLLDPALETMLVLTMGRARVIIMEWHSQHQPHQQRRSSSSSCSSSCCTSSPLSFRFQVFDQPQLHGLFAFVYTLCRLRGYKTIVKFFPHEATDLEPVLHALQSQDRQHHERWQTRYGLLLWLSMLVLVPFDICSIDSGLE-------NNGVTLVGALCDLAVEYLRDAGPTREAAAVCLAGLLKRPDMEAQQLAKFLTWAEGIL-TSSGEEGEDSEEGGERRAGGGAGGAGGAGGAEGRSHQSDTFLLLGVLQTLAVLLKAGHRQNLLSFLPSLLHCLARLDPRDFGSQTLNRKLKMKLLQRIGLAYLPPRVAAWRYQRGHRSLLDNLKKAKGEEGGEGGGAVATVQEQEKENEEEEGEISED----LEEIVEEILGGLRDRDTIVRWSAAKGIGRITSRLPLDYADEVVASVLMGFAEGASDSAWHGGCLALAELARRGLLLPGRLGEVVPVVAKGLQYDVRRGHTSVGAHVRDAACYVCWAFARAYSPLVMREHVPRLAEGMLMTSLFDREINCRRAASAAFQENVGRQGHENFPHGIDILTVADYFTLGNRQVAFLEVAPAVARFGPYTRVAIDHLAGVKLRHWDCSVRKLTSVALGKLVRLAPAYMSEEVLPFLLQEVDAVDLHRRHGALLGMAEVVLGLAALPFLGLGGEVGRGVVEVVPRLEQARLYRGRGGEYVRGAACRLIECVALAPVTLGVKRQLRLLDSIDENLRHPVEQVQERAVAAVRAFTRSYFGGGGGDGGGERGRGGVERPPSTPSARLQARVVDKYLGLVEKGDNVAVTRGFVRALGVLPARLLLPSLDSILGLLDELSREERKVGDEPDAETRRNALWTLVEITQTLGVQGRRKEGRKGWMNREQVQRVLGILLRSLGDYAMDKRGDIGSWVRMAALQGLASVVRVVREEGREGRREDGKIYIGERVVTAYGEGIVREVRCEGEVCMVQFEEGQAGFSFFPYGPGLGLLSRPTCQPLGKKERGTKEEGNERTGAADSMIIGNEDGENVGEAA-GAAAFSSLLIDHVLMTKIISAVLKQLCEKLDAVRECAGNALLQLLPLAHDAAAYPLLVSLFDNKNNSSTTSSNCYIIQRKQENEKKTFRGGAPSEIFPRVVRVLEIEQYHREVLAGMVVSIGGLTESVVKASLGAVVEWAQQQRQKVEEGTDEGKGGVNLVG--------KLGVSMLELFDANVGEDRVVWPLLRSVDLFYQKGVFAAEEVRERGDDGGAEGVGNVGGKEGEREEPMGLAWGLVDRLSRELNGCRDFKKMLACLNVALHLLSPLSFYPHQESVHSGAAALRLVLLLLGHRFPRVRKAAAEQLYTKFLLQDHLLASRPEAQEKVLELLTNTNWDGEDLRQVRGVRDLMCGLLVLAVPGGKGKEEGGEEDGGRGKGGT--GGEDLASYAALVKEMGY 1459
            DDS     G + D EE SCEST+FVE+ EVL RL +LAGP PP S+TGELEWLQKVLDKY EQSTLLDPA+E ML LTMGRAR+II+ W ++    Q              T+   SF FQ+F   QL  LFAFVY LCRLRG KT++ FFPHEATDLEPVLHALQSQDRQ    WQTRY LLLWLSMLVLVPF+ICSIDSG++        + VTLVGA+CD A EYLRD GPTREAAAVCLA LLKRPDME  QLA FL WAEG+L       G + EE G+R  G G GG      A G     + FL LGVLQTL+VLLKAGHRQNLL+FLPSLL CLA+    D GS TL+RKLK+KLLQR+ LAYLPPRVA+WRY+RG RSLLDNL+  +   GG   G     +E  +E E EEG+  ED    LE+IVEE+L GLRDRDT+VRWSAAKG+GRI SRLP  YADEVVASVL  F E A DSAWHGGCLALAELARRG LLPGRLG  VPVV + L+YDVRRG  SVGAHVRDAACYVCWAFARAYSP  MR +V RLA GML+T+LFDREINCRRAA+AAFQENVGRQG  NF HGI IL  ADYFTLGNRQ A+L + PAVA F PYTR  I+HLA VKLRH D S+R L S AL ++  LAP+++ +++LP L+ +VDA+DL  RHGALLG+AE++LGL+ LP   L GE  + VV +VPR+EQARLYRGRGGE VR AACRLIEC+ALA V L VK QLRLLDS+DENLRHP + V+  AVAA+RAFT +YFG G  +                PSARLQARVVDKY  LVE  +NVAVTRGF+RALG LPARLL PS  ++L  ++      R+VGDEPDAETRRN +  L E+ +T                       LG+ +   G     +RG  G  +  A +  L S++     +    +R D    +G  V  A  +G+ + V               AG   FPYGPG GL  R +CQPL   + G K+    RT  A +  +G     ++G+A  G  A S+ LI   LMT I+SAVLKQLCEKLDAVRECAG  L  +LPLA DA AY  L+++F ++     +                  +GG  + ++PR VR+L +  YH  ++AG+V+S+GGLTESVVKAS+ AVVEWA+QQR    E  +E +      G        +   S+L LFDA+ G DRV+ PLLRS+DLFYQKGV  +     R    G E    VG ++G+      L+W L DRL RE+ GCR+  K+LACL VALHLLSPL+F   QE   +GAAALRL+LLLLGHRFPRVRK AA++LYT  LL DHLLA   +AQE+VLE L    W+ EDL+ + GVRD +C +LVLA  G      GG     RG GG    GE+LASYAALVKEMGY
Sbjct:    6 DDSNN---GHDRDEEETSCESTYFVERDEVLARLTLLAGPEPPASLTGELEWLQKVLDKYLEQSTLLDPAMEKMLALTMGRARLIILSWQNKRLAEQ-------------VTAPAPSFPFQIFRNAQLDALFAFVYVLCRLRGRKTVITFFPHEATDLEPVLHALQSQDRQDCGLWQTRYILLLWLSMLVLVPFNICSIDSGVDAGQSGRAQSSVTLVGAICDQATEYLRDPGPTREAAAVCLASLLKRPDMECGQLAVFLKWAEGVLGVRDPSAGAEMEERGQR--GSGGGGLEATLAAPG-----EAFLPLGVLQTLSVLLKAGHRQNLLAFLPSLLRCLAQGPSSDLGSLTLSRKLKIKLLQRVALAYLPPRVASWRYRRGQRSLLDNLRSVQEARGGRRLGPERGTEEGGEEEEVEEGKDEEDVPEALEDIVEELLLGLRDRDTVVRWSAAKGLGRIASRLPESYADEVVASVLSSFTESAPDSAWHGGCLALAELARRGSLLPGRLGLAVPVVTRALRYDVRRGQASVGAHVRDAACYVCWAFARAYSPQAMRPYVQRLATGMLLTALFDREINCRRAAAAAFQENVGRQGARNFAHGIAILAAADYFTLGNRQAAYLSIGPAVAHFPPYTRSIIEHLALVKLRHPDPSIRLLGSQALHRMAGLAPSFLLDDILPTLVAQVDALDLCCRHGALLGVAELLLGLSQLPSF-LPGETLKAVVAIVPRIEQARLYRGRGGELVREAACRLIECLALALVPLSVKTQLRLLDSLDENLRHPADAVRAHAVAAIRAFTHAYFGRGMDE----------------PSARLQARVVDKYRRLVETDENVAVTRGFLRALGALPARLLFPSFPALLDTIETQLAPNRRVGDEPDAETRRNGILALGEMAET-----------------------LGVEVSGGG-----RRGARG--MNSAQVHRLISLLLKGTGDYAMDKRGD----VGSWVRMAALQGLEKTVTL-------------AGAYLFPYGPGCGLFPRQSCQPLSVSD-GVKDA---RTDDAAATAVGTA---SIGDAGVGRFASSTSLISPELMTAIVSAVLKQLCEKLDAVRECAGRVLSTILPLARDAEAYSTLLAVFSSEAEGGLS-----------------LKGGDSAAVYPRAVRLLGVRAYHEAIVAGLVISVGGLTESVVKASVAAVVEWARQQRLSKRERQEECRSNACEDGHKMPPRLQEFFESLLGLFDAHSGNDRVIMPLLRSLDLFYQKGVLVS-----RAQAAGWE----VGSEDGKHAGKASLSWRLADRLLREVTGCRNVTKLLACLRVALHLLSPLTFRAGQEEEEAGAAALRLILLLLGHRFPRVRKLAAQELYTALLLHDHLLAGGGDAQERVLEALLGAAWEEEDLQALCGVRDEICAVLVLAPLGA-----GGTVVSRRGLGGRKGAGEELASYAALVKEMGY 1360          
The following BLAST results are available for this feature:
BLAST of NO10G02620.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25478.10.000e+056.01tubulin-specific chaperone d [Nannochloropsis gadi... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02620NO10G02620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G02620.1NO10G02620.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G02620.1.cds1NO10G02620.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G02620.1 ID=NO10G02620.1|Name=NO10G02620.1|organism=Nannochloropsis oceanica|type=mRNA|length=4390bp
ACTACAGGCTAGAATGGACGATTCCACACGCACTGAAGGCGGTGGGGAAT
GCGATTATGAAGAAGCATCGTGCGAGTCCACCCACTTCGTCGAGCAGGCT
GAAGTGCTGCGCCGCCTCGAAGTCTTGGCTGGGCCGACGCCGCCCGAGTC
GATTACTGGAGAGTTGGAATGGCTGCAAAAAGTGCTCGATAAGTACCAAG
AACAAAGCACCTTGCTGGATCCAGCATTGGAAACTATGCTTGTCTTGACG
ATGGGACGGGCACGCGTCATTATCATGGAGTGGCACAGTCAACACCAACC
CCACCAGCAGCGCCGCTCCTCCTCTTCGTCCTGCTCCTCCTCCTGCTGTA
CCTCCTCTCCCCTGTCCTTCCGCTTCCAAGTCTTCGACCAACCTCAACTC
CACGGTTTGTTCGCCTTTGTCTACACCCTTTGTCGCCTGCGAGGGTACAA
AACAATCGTTAAATTCTTTCCTCACGAAGCCACAGACCTGGAACCGGTCC
TCCATGCCCTCCAATCCCAAGACCGGCAACACCACGAAAGATGGCAAACC
CGCTACGGGCTCCTCCTCTGGCTCAGCATGTTGGTCCTCGTCCCCTTCGA
TATCTGCTCCATTGATTCCGGCCTGGAAAATAACGGTGTAACACTCGTAG
GCGCGTTGTGTGATTTAGCGGTAGAGTACCTGAGAGACGCTGGTCCCACC
CGCGAGGCAGCTGCAGTCTGCCTCGCTGGTCTACTGAAACGTCCAGATAT
GGAAGCGCAGCAACTTGCCAAATTTTTAACCTGGGCAGAGGGGATTTTAA
CGTCGTCTGGGGAGGAGGGGGAGGATTCGGAGGAGGGAGGGGAGAGGAGA
GCTGGAGGAGGAGCAGGAGGAGCAGGAGGAGCAGGAGGAGCAGAAGGAAG
GTCTCATCAGAGCGACACTTTCCTATTACTGGGCGTGTTGCAAACCCTTG
CTGTGCTACTCAAAGCCGGGCATCGTCAAAACCTCCTCTCCTTCCTCCCC
TCCCTCCTTCACTGCCTCGCGCGGTTGGACCCGCGGGATTTTGGCTCCCA
AACACTTAATCGAAAATTAAAAATGAAATTATTGCAACGCATTGGCCTCG
CCTATTTACCCCCGCGAGTGGCAGCCTGGCGCTATCAGAGGGGTCATCGC
TCCTTGTTGGATAATCTGAAGAAGGCAAAGGGAGAAGAAGGAGGAGAAGG
AGGAGGAGCAGTAGCAACAGTACAGGAGCAGGAGAAGGAGAATGAGGAGG
AGGAAGGGGAGATATCGGAGGACTTGGAAGAAATCGTGGAGGAAATTTTG
GGCGGGTTGAGGGACCGAGATACGATTGTACGCTGGTCGGCGGCGAAGGG
GATAGGGAGGATTACGAGTCGGCTGCCTCTGGACTACGCGGATGAGGTGG
TGGCAAGCGTTTTGATGGGTTTCGCGGAGGGTGCATCGGATTCGGCTTGG
CATGGTGGATGTCTGGCCTTGGCCGAGTTGGCAAGGAGGGGGTTGTTGCT
GCCGGGTAGGTTGGGGGAGGTAGTGCCGGTGGTGGCCAAGGGGCTACAGT
ATGATGTGCGGAGAGGTCACACGAGCGTAGGGGCGCATGTGAGGGATGCA
GCCTGCTACGTGTGCTGGGCCTTCGCGCGGGCGTATTCTCCCTTGGTCAT
GCGTGAACATGTACCCCGCCTCGCGGAAGGCATGTTGATGACTTCCTTGT
TCGACCGCGAAATCAATTGTCGACGGGCGGCCTCGGCGGCGTTTCAAGAG
AATGTGGGGCGACAAGGCCATGAGAATTTCCCCCATGGGATCGACATATT
GACAGTGGCGGATTACTTCACCCTGGGCAACCGGCAAGTCGCTTTTTTGG
AGGTGGCTCCGGCAGTAGCACGATTCGGCCCATATACGCGGGTGGCGATA
GACCATTTGGCGGGCGTGAAGCTGCGGCATTGGGACTGCTCCGTCCGAAA
ATTAACGAGTGTGGCGTTGGGGAAGCTGGTGAGGCTGGCCCCTGCGTACA
TGAGTGAGGAGGTATTGCCTTTCTTGTTGCAGGAGGTGGATGCTGTGGAC
TTGCATAGAAGGCATGGAGCGCTTTTGGGGATGGCTGAGGTGGTGTTGGG
CCTGGCTGCTTTGCCTTTTTTGGGGTTAGGGGGGGAGGTGGGGAGGGGGG
TGGTAGAAGTGGTGCCGCGTCTCGAGCAAGCGAGGTTGTACCGAGGGAGG
GGAGGGGAGTATGTGAGGGGGGCGGCGTGTCGGCTGATCGAGTGTGTGGC
CTTGGCCCCTGTGACCCTGGGTGTGAAACGGCAGTTGAGGTTGTTGGACT
CTATTGACGAGAATTTGAGGCATCCGGTGGAGCAGGTGCAGGAAAGAGCA
GTGGCAGCAGTGCGTGCGTTTACCCGCAGCTATTTCGGTGGTGGTGGTGG
CGATGGTGGTGGAGAAAGAGGACGAGGAGGGGTGGAAAGGCCTCCGTCCA
CGCCTTCAGCAAGGCTGCAGGCCAGGGTGGTAGACAAGTATCTAGGGCTG
GTCGAGAAAGGTGACAACGTAGCAGTGACCAGGGGGTTTGTTCGGGCTCT
GGGAGTATTGCCGGCGCGGCTCCTCCTTCCCTCTCTTGATTCGATCTTGG
GGCTTTTGGACGAGTTGTCGAGGGAGGAGAGGAAGGTCGGTGACGAGCCT
GATGCAGAGACAAGGCGGAATGCCCTGTGGACTTTGGTGGAGATCACACA
AACGTTAGGAGTGCAAGGAAGACGGAAGGAAGGGAGGAAGGGGTGGATGA
ACCGAGAGCAGGTCCAGCGGGTGCTTGGGATTTTATTGAGGAGTTTGGGG
GATTATGCCATGGACAAGAGGGGGGACATAGGGTCTTGGGTTCGGATGGC
GGCTTTGCAGGGATTGGCGTCGGTTGTAAGGGTGGTGAGGGAGGAAGGGA
GGGAAGGAAGGAGGGAGGATGGGAAGATATATATCGGAGAGAGGGTCGTC
ACTGCTTATGGTGAGGGGATTGTGAGGGAGGTGAGATGTGAGGGGGAAGT
GTGTATGGTGCAGTTCGAGGAAGGGCAAGCCGGATTTTCCTTCTTTCCGT
ATGGACCTGGGTTAGGGCTGTTGTCACGGCCGACGTGTCAGCCTTTGGGG
AAGAAGGAGAGAGGGACAAAGGAGGAAGGAAATGAGAGGACAGGAGCAGC
GGATTCGATGATCATTGGTAATGAAGATGGGGAGAATGTAGGAGAAGCAG
CAGGAGCAGCAGCTTTCTCGTCCTTACTGATAGACCATGTTTTGATGACA
AAGATCATCTCTGCTGTCTTGAAGCAGCTCTGTGAGAAACTTGATGCTGT
ACGTGAGTGCGCGGGCAATGCCCTCCTTCAGCTCCTGCCCCTCGCCCATG
ATGCGGCTGCATACCCGTTGCTCGTGTCGCTCTTTGATAACAAGAACAAT
AGTAGCACCACCAGCAGCAACTGCTACATCATCCAGAGGAAGCAGGAAAA
CGAAAAAAAAACATTCCGAGGCGGAGCTCCGTCTGAGATCTTCCCCCGCG
TCGTCCGCGTCTTGGAGATCGAGCAATACCACAGGGAGGTGCTTGCGGGG
ATGGTCGTGAGCATTGGAGGATTGACAGAGTCGGTGGTGAAGGCGAGTTT
GGGGGCAGTGGTGGAGTGGGCGCAGCAGCAGCGGCAGAAGGTGGAGGAGG
GAACGGACGAAGGAAAAGGTGGCGTGAATTTGGTGGGTAAACTAGGAGTT
AGCATGCTGGAACTATTTGATGCCAACGTTGGGGAGGATCGAGTCGTCTG
GCCTTTGCTCCGCTCCGTGGATTTATTCTACCAAAAGGGAGTATTTGCGG
CGGAGGAGGTCAGGGAGAGGGGAGATGATGGAGGGGCGGAAGGTGTTGGA
AACGTAGGGGGGAAGGAGGGAGAGAGGGAGGAACCGATGGGACTCGCCTG
GGGGTTGGTCGATCGGCTCAGCCGGGAATTGAACGGCTGTCGCGACTTCA
AAAAAATGCTCGCCTGCCTCAACGTTGCCTTGCACCTCCTCTCTCCTCTC
TCCTTTTACCCTCACCAAGAATCTGTCCATTCAGGCGCGGCTGCTTTGCG
TCTTGTTTTGCTTTTACTCGGGCATCGTTTTCCTCGAGTCCGAAAGGCCG
CAGCGGAGCAATTGTATACGAAGTTTTTGTTGCAGGATCATCTACTTGCC
TCCCGGCCTGAGGCTCAAGAGAAGGTGTTGGAGCTATTGACAAACACAAA
TTGGGATGGTGAGGATCTGAGGCAAGTCCGCGGTGTCCGTGATTTGATGT
GTGGACTGTTGGTGCTGGCCGTGCCGGGAGGAAAAGGGAAGGAAGAGGGA
GGGGAGGAGGATGGGGGGAGGGGAAAGGGAGGGACAGGGGGGGAGGACTT
GGCGTCCTATGCGGCGTTGGTGAAGGAGATGGGGTATTAG
back to top

protein sequence of NO10G02620.1

>NO10G02620.1-protein ID=NO10G02620.1-protein|Name=NO10G02620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1459bp
MDDSTRTEGGGECDYEEASCESTHFVEQAEVLRRLEVLAGPTPPESITGE
LEWLQKVLDKYQEQSTLLDPALETMLVLTMGRARVIIMEWHSQHQPHQQR
RSSSSSCSSSCCTSSPLSFRFQVFDQPQLHGLFAFVYTLCRLRGYKTIVK
FFPHEATDLEPVLHALQSQDRQHHERWQTRYGLLLWLSMLVLVPFDICSI
DSGLENNGVTLVGALCDLAVEYLRDAGPTREAAAVCLAGLLKRPDMEAQQ
LAKFLTWAEGILTSSGEEGEDSEEGGERRAGGGAGGAGGAGGAEGRSHQS
DTFLLLGVLQTLAVLLKAGHRQNLLSFLPSLLHCLARLDPRDFGSQTLNR
KLKMKLLQRIGLAYLPPRVAAWRYQRGHRSLLDNLKKAKGEEGGEGGGAV
ATVQEQEKENEEEEGEISEDLEEIVEEILGGLRDRDTIVRWSAAKGIGRI
TSRLPLDYADEVVASVLMGFAEGASDSAWHGGCLALAELARRGLLLPGRL
GEVVPVVAKGLQYDVRRGHTSVGAHVRDAACYVCWAFARAYSPLVMREHV
PRLAEGMLMTSLFDREINCRRAASAAFQENVGRQGHENFPHGIDILTVAD
YFTLGNRQVAFLEVAPAVARFGPYTRVAIDHLAGVKLRHWDCSVRKLTSV
ALGKLVRLAPAYMSEEVLPFLLQEVDAVDLHRRHGALLGMAEVVLGLAAL
PFLGLGGEVGRGVVEVVPRLEQARLYRGRGGEYVRGAACRLIECVALAPV
TLGVKRQLRLLDSIDENLRHPVEQVQERAVAAVRAFTRSYFGGGGGDGGG
ERGRGGVERPPSTPSARLQARVVDKYLGLVEKGDNVAVTRGFVRALGVLP
ARLLLPSLDSILGLLDELSREERKVGDEPDAETRRNALWTLVEITQTLGV
QGRRKEGRKGWMNREQVQRVLGILLRSLGDYAMDKRGDIGSWVRMAALQG
LASVVRVVREEGREGRREDGKIYIGERVVTAYGEGIVREVRCEGEVCMVQ
FEEGQAGFSFFPYGPGLGLLSRPTCQPLGKKERGTKEEGNERTGAADSMI
IGNEDGENVGEAAGAAAFSSLLIDHVLMTKIISAVLKQLCEKLDAVRECA
GNALLQLLPLAHDAAAYPLLVSLFDNKNNSSTTSSNCYIIQRKQENEKKT
FRGGAPSEIFPRVVRVLEIEQYHREVLAGMVVSIGGLTESVVKASLGAVV
EWAQQQRQKVEEGTDEGKGGVNLVGKLGVSMLELFDANVGEDRVVWPLLR
SVDLFYQKGVFAAEEVRERGDDGGAEGVGNVGGKEGEREEPMGLAWGLVD
RLSRELNGCRDFKKMLACLNVALHLLSPLSFYPHQESVHSGAAALRLVLL
LLGHRFPRVRKAAAEQLYTKFLLQDHLLASRPEAQEKVLELLTNTNWDGE
DLRQVRGVRDLMCGLLVLAVPGGKGKEEGGEEDGGRGKGGTGGEDLASYA
ALVKEMGY*
back to top

mRNA from alignment at chr10:715449..719838+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G02620.1 ID=NO10G02620.1|Name=NO10G02620.1|organism=Nannochloropsis oceanica|type=mRNA|length=4390bp|location=Sequence derived from alignment at chr10:715449..719838+ (Nannochloropsis oceanica)
ACTACAGGCTAGAATGGACGATTCCACACGCACTGAAGGCGGTGGGGAAT GCGATTATGAAGAAGCATCGTGCGAGTCCACCCACTTCGTCGAGCAGGCT GAAGTGCTGCGCCGCCTCGAAGTCTTGGCTGGGCCGACGCCGCCCGAGTC GATTACTGGAGAGTTGGAATGGCTGCAAAAAGTGCTCGATAAGTACCAAG AACAAAGCACCTTGCTGGATCCAGCATTGGAAACTATGCTTGTCTTGACG ATGGGACGGGCACGCGTCATTATCATGGAGTGGCACAGTCAACACCAACC CCACCAGCAGCGCCGCTCCTCCTCTTCGTCCTGCTCCTCCTCCTGCTGTA CCTCCTCTCCCCTGTCCTTCCGCTTCCAAGTCTTCGACCAACCTCAACTC CACGGTTTGTTCGCCTTTGTCTACACCCTTTGTCGCCTGCGAGGGTACAA AACAATCGTTAAATTCTTTCCTCACGAAGCCACAGACCTGGAACCGGTCC TCCATGCCCTCCAATCCCAAGACCGGCAACACCACGAAAGATGGCAAACC CGCTACGGGCTCCTCCTCTGGCTCAGCATGTTGGTCCTCGTCCCCTTCGA TATCTGCTCCATTGATTCCGGCCTGGAAAATAACGGTGTAACACTCGTAG GCGCGTTGTGTGATTTAGCGGTAGAGTACCTGAGAGACGCTGGTCCCACC CGCGAGGCAGCTGCAGTCTGCCTCGCTGGTCTACTGAAACGTCCAGATAT GGAAGCGCAGCAACTTGCCAAATTTTTAACCTGGGCAGAGGGGATTTTAA CGTCGTCTGGGGAGGAGGGGGAGGATTCGGAGGAGGGAGGGGAGAGGAGA GCTGGAGGAGGAGCAGGAGGAGCAGGAGGAGCAGGAGGAGCAGAAGGAAG GTCTCATCAGAGCGACACTTTCCTATTACTGGGCGTGTTGCAAACCCTTG CTGTGCTACTCAAAGCCGGGCATCGTCAAAACCTCCTCTCCTTCCTCCCC TCCCTCCTTCACTGCCTCGCGCGGTTGGACCCGCGGGATTTTGGCTCCCA AACACTTAATCGAAAATTAAAAATGAAATTATTGCAACGCATTGGCCTCG CCTATTTACCCCCGCGAGTGGCAGCCTGGCGCTATCAGAGGGGTCATCGC TCCTTGTTGGATAATCTGAAGAAGGCAAAGGGAGAAGAAGGAGGAGAAGG AGGAGGAGCAGTAGCAACAGTACAGGAGCAGGAGAAGGAGAATGAGGAGG AGGAAGGGGAGATATCGGAGGACTTGGAAGAAATCGTGGAGGAAATTTTG GGCGGGTTGAGGGACCGAGATACGATTGTACGCTGGTCGGCGGCGAAGGG GATAGGGAGGATTACGAGTCGGCTGCCTCTGGACTACGCGGATGAGGTGG TGGCAAGCGTTTTGATGGGTTTCGCGGAGGGTGCATCGGATTCGGCTTGG CATGGTGGATGTCTGGCCTTGGCCGAGTTGGCAAGGAGGGGGTTGTTGCT GCCGGGTAGGTTGGGGGAGGTAGTGCCGGTGGTGGCCAAGGGGCTACAGT ATGATGTGCGGAGAGGTCACACGAGCGTAGGGGCGCATGTGAGGGATGCA GCCTGCTACGTGTGCTGGGCCTTCGCGCGGGCGTATTCTCCCTTGGTCAT GCGTGAACATGTACCCCGCCTCGCGGAAGGCATGTTGATGACTTCCTTGT TCGACCGCGAAATCAATTGTCGACGGGCGGCCTCGGCGGCGTTTCAAGAG AATGTGGGGCGACAAGGCCATGAGAATTTCCCCCATGGGATCGACATATT GACAGTGGCGGATTACTTCACCCTGGGCAACCGGCAAGTCGCTTTTTTGG AGGTGGCTCCGGCAGTAGCACGATTCGGCCCATATACGCGGGTGGCGATA GACCATTTGGCGGGCGTGAAGCTGCGGCATTGGGACTGCTCCGTCCGAAA ATTAACGAGTGTGGCGTTGGGGAAGCTGGTGAGGCTGGCCCCTGCGTACA TGAGTGAGGAGGTATTGCCTTTCTTGTTGCAGGAGGTGGATGCTGTGGAC TTGCATAGAAGGCATGGAGCGCTTTTGGGGATGGCTGAGGTGGTGTTGGG CCTGGCTGCTTTGCCTTTTTTGGGGTTAGGGGGGGAGGTGGGGAGGGGGG TGGTAGAAGTGGTGCCGCGTCTCGAGCAAGCGAGGTTGTACCGAGGGAGG GGAGGGGAGTATGTGAGGGGGGCGGCGTGTCGGCTGATCGAGTGTGTGGC CTTGGCCCCTGTGACCCTGGGTGTGAAACGGCAGTTGAGGTTGTTGGACT CTATTGACGAGAATTTGAGGCATCCGGTGGAGCAGGTGCAGGAAAGAGCA GTGGCAGCAGTGCGTGCGTTTACCCGCAGCTATTTCGGTGGTGGTGGTGG CGATGGTGGTGGAGAAAGAGGACGAGGAGGGGTGGAAAGGCCTCCGTCCA CGCCTTCAGCAAGGCTGCAGGCCAGGGTGGTAGACAAGTATCTAGGGCTG GTCGAGAAAGGTGACAACGTAGCAGTGACCAGGGGGTTTGTTCGGGCTCT GGGAGTATTGCCGGCGCGGCTCCTCCTTCCCTCTCTTGATTCGATCTTGG GGCTTTTGGACGAGTTGTCGAGGGAGGAGAGGAAGGTCGGTGACGAGCCT GATGCAGAGACAAGGCGGAATGCCCTGTGGACTTTGGTGGAGATCACACA AACGTTAGGAGTGCAAGGAAGACGGAAGGAAGGGAGGAAGGGGTGGATGA ACCGAGAGCAGGTCCAGCGGGTGCTTGGGATTTTATTGAGGAGTTTGGGG GATTATGCCATGGACAAGAGGGGGGACATAGGGTCTTGGGTTCGGATGGC GGCTTTGCAGGGATTGGCGTCGGTTGTAAGGGTGGTGAGGGAGGAAGGGA GGGAAGGAAGGAGGGAGGATGGGAAGATATATATCGGAGAGAGGGTCGTC ACTGCTTATGGTGAGGGGATTGTGAGGGAGGTGAGATGTGAGGGGGAAGT GTGTATGGTGCAGTTCGAGGAAGGGCAAGCCGGATTTTCCTTCTTTCCGT ATGGACCTGGGTTAGGGCTGTTGTCACGGCCGACGTGTCAGCCTTTGGGG AAGAAGGAGAGAGGGACAAAGGAGGAAGGAAATGAGAGGACAGGAGCAGC GGATTCGATGATCATTGGTAATGAAGATGGGGAGAATGTAGGAGAAGCAG CAGGAGCAGCAGCTTTCTCGTCCTTACTGATAGACCATGTTTTGATGACA AAGATCATCTCTGCTGTCTTGAAGCAGCTCTGTGAGAAACTTGATGCTGT ACGTGAGTGCGCGGGCAATGCCCTCCTTCAGCTCCTGCCCCTCGCCCATG ATGCGGCTGCATACCCGTTGCTCGTGTCGCTCTTTGATAACAAGAACAAT AGTAGCACCACCAGCAGCAACTGCTACATCATCCAGAGGAAGCAGGAAAA CGAAAAAAAAACATTCCGAGGCGGAGCTCCGTCTGAGATCTTCCCCCGCG TCGTCCGCGTCTTGGAGATCGAGCAATACCACAGGGAGGTGCTTGCGGGG ATGGTCGTGAGCATTGGAGGATTGACAGAGTCGGTGGTGAAGGCGAGTTT GGGGGCAGTGGTGGAGTGGGCGCAGCAGCAGCGGCAGAAGGTGGAGGAGG GAACGGACGAAGGAAAAGGTGGCGTGAATTTGGTGGGTAAACTAGGAGTT AGCATGCTGGAACTATTTGATGCCAACGTTGGGGAGGATCGAGTCGTCTG GCCTTTGCTCCGCTCCGTGGATTTATTCTACCAAAAGGGAGTATTTGCGG CGGAGGAGGTCAGGGAGAGGGGAGATGATGGAGGGGCGGAAGGTGTTGGA AACGTAGGGGGGAAGGAGGGAGAGAGGGAGGAACCGATGGGACTCGCCTG GGGGTTGGTCGATCGGCTCAGCCGGGAATTGAACGGCTGTCGCGACTTCA AAAAAATGCTCGCCTGCCTCAACGTTGCCTTGCACCTCCTCTCTCCTCTC TCCTTTTACCCTCACCAAGAATCTGTCCATTCAGGCGCGGCTGCTTTGCG TCTTGTTTTGCTTTTACTCGGGCATCGTTTTCCTCGAGTCCGAAAGGCCG CAGCGGAGCAATTGTATACGAAGTTTTTGTTGCAGGATCATCTACTTGCC TCCCGGCCTGAGGCTCAAGAGAAGGTGTTGGAGCTATTGACAAACACAAA TTGGGATGGTGAGGATCTGAGGCAAGTCCGCGGTGTCCGTGATTTGATGT GTGGACTGTTGGTGCTGGCCGTGCCGGGAGGAAAAGGGAAGGAAGAGGGA GGGGAGGAGGATGGGGGGAGGGGAAAGGGAGGGACAGGGGGGGAGGACTT GGCGTCCTATGCGGCGTTGGTGAAGGAGATGGGGTATTAG
back to top

Coding sequence (CDS) from alignment at chr10:715449..719838+

>NO10G02620.1 ID=NO10G02620.1|Name=NO10G02620.1|organism=Nannochloropsis oceanica|type=CDS|length=4377bp|location=Sequence derived from alignment at chr10:715449..719838+ (Nannochloropsis oceanica)
ATGGACGATTCCACACGCACTGAAGGCGGTGGGGAATGCGATTATGAAGA
AGCATCGTGCGAGTCCACCCACTTCGTCGAGCAGGCTGAAGTGCTGCGCC
GCCTCGAAGTCTTGGCTGGGCCGACGCCGCCCGAGTCGATTACTGGAGAG
TTGGAATGGCTGCAAAAAGTGCTCGATAAGTACCAAGAACAAAGCACCTT
GCTGGATCCAGCATTGGAAACTATGCTTGTCTTGACGATGGGACGGGCAC
GCGTCATTATCATGGAGTGGCACAGTCAACACCAACCCCACCAGCAGCGC
CGCTCCTCCTCTTCGTCCTGCTCCTCCTCCTGCTGTACCTCCTCTCCCCT
GTCCTTCCGCTTCCAAGTCTTCGACCAACCTCAACTCCACGGTTTGTTCG
CCTTTGTCTACACCCTTTGTCGCCTGCGAGGGTACAAAACAATCGTTAAA
TTCTTTCCTCACGAAGCCACAGACCTGGAACCGGTCCTCCATGCCCTCCA
ATCCCAAGACCGGCAACACCACGAAAGATGGCAAACCCGCTACGGGCTCC
TCCTCTGGCTCAGCATGTTGGTCCTCGTCCCCTTCGATATCTGCTCCATT
GATTCCGGCCTGGAAAATAACGGTGTAACACTCGTAGGCGCGTTGTGTGA
TTTAGCGGTAGAGTACCTGAGAGACGCTGGTCCCACCCGCGAGGCAGCTG
CAGTCTGCCTCGCTGGTCTACTGAAACGTCCAGATATGGAAGCGCAGCAA
CTTGCCAAATTTTTAACCTGGGCAGAGGGGATTTTAACGTCGTCTGGGGA
GGAGGGGGAGGATTCGGAGGAGGGAGGGGAGAGGAGAGCTGGAGGAGGAG
CAGGAGGAGCAGGAGGAGCAGGAGGAGCAGAAGGAAGGTCTCATCAGAGC
GACACTTTCCTATTACTGGGCGTGTTGCAAACCCTTGCTGTGCTACTCAA
AGCCGGGCATCGTCAAAACCTCCTCTCCTTCCTCCCCTCCCTCCTTCACT
GCCTCGCGCGGTTGGACCCGCGGGATTTTGGCTCCCAAACACTTAATCGA
AAATTAAAAATGAAATTATTGCAACGCATTGGCCTCGCCTATTTACCCCC
GCGAGTGGCAGCCTGGCGCTATCAGAGGGGTCATCGCTCCTTGTTGGATA
ATCTGAAGAAGGCAAAGGGAGAAGAAGGAGGAGAAGGAGGAGGAGCAGTA
GCAACAGTACAGGAGCAGGAGAAGGAGAATGAGGAGGAGGAAGGGGAGAT
ATCGGAGGACTTGGAAGAAATCGTGGAGGAAATTTTGGGCGGGTTGAGGG
ACCGAGATACGATTGTACGCTGGTCGGCGGCGAAGGGGATAGGGAGGATT
ACGAGTCGGCTGCCTCTGGACTACGCGGATGAGGTGGTGGCAAGCGTTTT
GATGGGTTTCGCGGAGGGTGCATCGGATTCGGCTTGGCATGGTGGATGTC
TGGCCTTGGCCGAGTTGGCAAGGAGGGGGTTGTTGCTGCCGGGTAGGTTG
GGGGAGGTAGTGCCGGTGGTGGCCAAGGGGCTACAGTATGATGTGCGGAG
AGGTCACACGAGCGTAGGGGCGCATGTGAGGGATGCAGCCTGCTACGTGT
GCTGGGCCTTCGCGCGGGCGTATTCTCCCTTGGTCATGCGTGAACATGTA
CCCCGCCTCGCGGAAGGCATGTTGATGACTTCCTTGTTCGACCGCGAAAT
CAATTGTCGACGGGCGGCCTCGGCGGCGTTTCAAGAGAATGTGGGGCGAC
AAGGCCATGAGAATTTCCCCCATGGGATCGACATATTGACAGTGGCGGAT
TACTTCACCCTGGGCAACCGGCAAGTCGCTTTTTTGGAGGTGGCTCCGGC
AGTAGCACGATTCGGCCCATATACGCGGGTGGCGATAGACCATTTGGCGG
GCGTGAAGCTGCGGCATTGGGACTGCTCCGTCCGAAAATTAACGAGTGTG
GCGTTGGGGAAGCTGGTGAGGCTGGCCCCTGCGTACATGAGTGAGGAGGT
ATTGCCTTTCTTGTTGCAGGAGGTGGATGCTGTGGACTTGCATAGAAGGC
ATGGAGCGCTTTTGGGGATGGCTGAGGTGGTGTTGGGCCTGGCTGCTTTG
CCTTTTTTGGGGTTAGGGGGGGAGGTGGGGAGGGGGGTGGTAGAAGTGGT
GCCGCGTCTCGAGCAAGCGAGGTTGTACCGAGGGAGGGGAGGGGAGTATG
TGAGGGGGGCGGCGTGTCGGCTGATCGAGTGTGTGGCCTTGGCCCCTGTG
ACCCTGGGTGTGAAACGGCAGTTGAGGTTGTTGGACTCTATTGACGAGAA
TTTGAGGCATCCGGTGGAGCAGGTGCAGGAAAGAGCAGTGGCAGCAGTGC
GTGCGTTTACCCGCAGCTATTTCGGTGGTGGTGGTGGCGATGGTGGTGGA
GAAAGAGGACGAGGAGGGGTGGAAAGGCCTCCGTCCACGCCTTCAGCAAG
GCTGCAGGCCAGGGTGGTAGACAAGTATCTAGGGCTGGTCGAGAAAGGTG
ACAACGTAGCAGTGACCAGGGGGTTTGTTCGGGCTCTGGGAGTATTGCCG
GCGCGGCTCCTCCTTCCCTCTCTTGATTCGATCTTGGGGCTTTTGGACGA
GTTGTCGAGGGAGGAGAGGAAGGTCGGTGACGAGCCTGATGCAGAGACAA
GGCGGAATGCCCTGTGGACTTTGGTGGAGATCACACAAACGTTAGGAGTG
CAAGGAAGACGGAAGGAAGGGAGGAAGGGGTGGATGAACCGAGAGCAGGT
CCAGCGGGTGCTTGGGATTTTATTGAGGAGTTTGGGGGATTATGCCATGG
ACAAGAGGGGGGACATAGGGTCTTGGGTTCGGATGGCGGCTTTGCAGGGA
TTGGCGTCGGTTGTAAGGGTGGTGAGGGAGGAAGGGAGGGAAGGAAGGAG
GGAGGATGGGAAGATATATATCGGAGAGAGGGTCGTCACTGCTTATGGTG
AGGGGATTGTGAGGGAGGTGAGATGTGAGGGGGAAGTGTGTATGGTGCAG
TTCGAGGAAGGGCAAGCCGGATTTTCCTTCTTTCCGTATGGACCTGGGTT
AGGGCTGTTGTCACGGCCGACGTGTCAGCCTTTGGGGAAGAAGGAGAGAG
GGACAAAGGAGGAAGGAAATGAGAGGACAGGAGCAGCGGATTCGATGATC
ATTGGTAATGAAGATGGGGAGAATGTAGGAGAAGCAGCAGGAGCAGCAGC
TTTCTCGTCCTTACTGATAGACCATGTTTTGATGACAAAGATCATCTCTG
CTGTCTTGAAGCAGCTCTGTGAGAAACTTGATGCTGTACGTGAGTGCGCG
GGCAATGCCCTCCTTCAGCTCCTGCCCCTCGCCCATGATGCGGCTGCATA
CCCGTTGCTCGTGTCGCTCTTTGATAACAAGAACAATAGTAGCACCACCA
GCAGCAACTGCTACATCATCCAGAGGAAGCAGGAAAACGAAAAAAAAACA
TTCCGAGGCGGAGCTCCGTCTGAGATCTTCCCCCGCGTCGTCCGCGTCTT
GGAGATCGAGCAATACCACAGGGAGGTGCTTGCGGGGATGGTCGTGAGCA
TTGGAGGATTGACAGAGTCGGTGGTGAAGGCGAGTTTGGGGGCAGTGGTG
GAGTGGGCGCAGCAGCAGCGGCAGAAGGTGGAGGAGGGAACGGACGAAGG
AAAAGGTGGCGTGAATTTGGTGGGTAAACTAGGAGTTAGCATGCTGGAAC
TATTTGATGCCAACGTTGGGGAGGATCGAGTCGTCTGGCCTTTGCTCCGC
TCCGTGGATTTATTCTACCAAAAGGGAGTATTTGCGGCGGAGGAGGTCAG
GGAGAGGGGAGATGATGGAGGGGCGGAAGGTGTTGGAAACGTAGGGGGGA
AGGAGGGAGAGAGGGAGGAACCGATGGGACTCGCCTGGGGGTTGGTCGAT
CGGCTCAGCCGGGAATTGAACGGCTGTCGCGACTTCAAAAAAATGCTCGC
CTGCCTCAACGTTGCCTTGCACCTCCTCTCTCCTCTCTCCTTTTACCCTC
ACCAAGAATCTGTCCATTCAGGCGCGGCTGCTTTGCGTCTTGTTTTGCTT
TTACTCGGGCATCGTTTTCCTCGAGTCCGAAAGGCCGCAGCGGAGCAATT
GTATACGAAGTTTTTGTTGCAGGATCATCTACTTGCCTCCCGGCCTGAGG
CTCAAGAGAAGGTGTTGGAGCTATTGACAAACACAAATTGGGATGGTGAG
GATCTGAGGCAAGTCCGCGGTGTCCGTGATTTGATGTGTGGACTGTTGGT
GCTGGCCGTGCCGGGAGGAAAAGGGAAGGAAGAGGGAGGGGAGGAGGATG
GGGGGAGGGGAAAGGGAGGGACAGGGGGGGAGGACTTGGCGTCCTATGCG
GCGTTGGTGAAGGAGATGGGGTATTAG
back to top
Synonyms
Publications