NO10G02330.1, NO10G02330.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G02330.1
Unique NameNO10G02330.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length522
Alignment locationchr10:640010..640912 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:640010..640912 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G02330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02330NO10G02330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G02330.1NO10G02330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G02330.1.cds1NO10G02330.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G02330.1.cds2NO10G02330.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G02330.1.cds3NO10G02330.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G02330.1.cds4NO10G02330.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G02330.1 ID=NO10G02330.1|Name=NO10G02330.1|organism=Nannochloropsis oceanica|type=mRNA|length=522bp
ATGACGTGCAATGCCACCGCCACATTCATCGACGTAATCCGAGCCCAGCA
GAACAATGACCTCCAACGCATCGAGGCCGAGCAGATGATGCGGGGGGAGA
AGGCATACATGAACGGCAAAGAGCGCGAGATGGAGGTCCTACAGACCGCA
ATCAAGACCGCGACAGCCAAGCGGGACTCAGCAAGAGCGACATACGACCG
CCTTCGGGCTGACAATATTGTGCAAGCCCACAAGAACAAGGCCAAGCGAG
CAGGCATGCTGCAAGTCGCCAACATTGTCGATGTGACCAACAAAGAGAAC
GACCGCAGCCTCGAGCAGCATAACAAAGAGGTTGAAGAGCTTCACAGACA
GCTTCTCTTTCATATTGAATCAGCGCGGAAACGGGCCCGATTCCTTTGTC
TGACCCTAAAGGTCGATCCCGATGATCCCCGCGTGGTGGAGAAAGGGAAT
GTCCGAGTGGAGGAGGTGGAGGGGGAAGAAGGGGGGGGGGGGAGGGGAGG
ACTTTGCCCTTGCCCTCAGTAG
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protein sequence of NO10G02330.1

>NO10G02330.1-protein ID=NO10G02330.1-protein|Name=NO10G02330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=174bp
MTCNATATFIDVIRAQQNNDLQRIEAEQMMRGEKAYMNGKEREMEVLQTA
IKTATAKRDSARATYDRLRADNIVQAHKNKAKRAGMLQVANIVDVTNKEN
DRSLEQHNKEVEELHRQLLFHIESARKRARFLCLTLKVDPDDPRVVEKGN
VRVEEVEGEEGGGGRGGLCPCPQ*
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mRNA from alignment at chr10:640010..640912-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G02330.1 ID=NO10G02330.1|Name=NO10G02330.1|organism=Nannochloropsis oceanica|type=mRNA|length=903bp|location=Sequence derived from alignment at chr10:640010..640912- (Nannochloropsis oceanica)
ATGACGTGCAATGCCACCGCCACATTCATCGACGTAATCCGAGCCCAGCA
GAACAATGACCTCCAACGCATCGAGGCCGAGCAGATGATGCGGGGGGAGA
AGGCATACATGAACGGCAAAGGTGCGTGAGTGATGGTGGAGATGAGGAGG
AGGGAGGGAAGGAGGGAAGCCAAGACAAGACCAGCGCCCTCCGTCATCGT
CGTGACAAAGGGGGAATATTGTCCGAAAGGGGTCCAGAGCACGAGAAGCA
GGCTCTCCTCCATTCCTCTTACTCTCCTGGCAGCTTTCTTTACTTCCTGG
TCTTTCCCACTTCCTGCAAAACAAAACAGAGCGCGAGATGGAGGTCCTAC
AGACCGCAATCAAGACCGCGACAGCCAAGCGGGACTCAGCAAGAGCGGTA
CGCACTTCATATCCTCCGTCCCCCTTCCTCATCCTCACCCTCCCCATCGA
CTTACTTCCACCCCCTCTCTCCTGTACTCCAACAGACATACGACCGCCTT
CGGGCTGACAATATTGTGCAAGCCCACAAGAACAAGGCCAAGCGAGCAGG
CATGCTGCAAGTCGCCAACATTGTCGATGTAAAGCTCGTTTGCCTCGTCG
CTCCCTTTCTCCTGCCTCCTCACTTGACCTTCTTCCTTCCTCCTTCCATT
ACTCCCTCACCAGGTGACCAACAAAGAGAACGACCGCAGCCTCGAGCAGC
ATAACAAAGAGGTTGAAGAGCTTCACAGACAGCTTCTCTTTCATATTGAA
TCAGCGCGGAAACGGGCCCGATTCCTTTGTCTGACCCTAAAGGTCGATCC
CGATGATCCCCGCGTGGTGGAGAAAGGGAATGTCCGAGTGGAGGAGGTGG
AGGGGGAAGAAGGGGGGGGGGGGAGGGGAGGACTTTGCCCTTGCCCTCAG
TAG
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Coding sequence (CDS) from alignment at chr10:640010..640912-

>NO10G02330.1 ID=NO10G02330.1|Name=NO10G02330.1|organism=Nannochloropsis oceanica|type=CDS|length=522bp|location=Sequence derived from alignment at chr10:640010..640912- (Nannochloropsis oceanica)
ATGACGTGCAATGCCACCGCCACATTCATCGACGTAATCCGAGCCCAGCA
GAACAATGACCTCCAACGCATCGAGGCCGAGCAGATGATGCGGGGGGAGA
AGGCATACATGAACGGCAAAGAGCGCGAGATGGAGGTCCTACAGACCGCA
ATCAAGACCGCGACAGCCAAGCGGGACTCAGCAAGAGCGACATACGACCG
CCTTCGGGCTGACAATATTGTGCAAGCCCACAAGAACAAGGCCAAGCGAG
CAGGCATGCTGCAAGTCGCCAACATTGTCGATGTGACCAACAAAGAGAAC
GACCGCAGCCTCGAGCAGCATAACAAAGAGGTTGAAGAGCTTCACAGACA
GCTTCTCTTTCATATTGAATCAGCGCGGAAACGGGCCCGATTCCTTTGTC
TGACCCTAAAGGTCGATCCCGATGATCCCCGCGTGGTGGAGAAAGGGAAT
GTCCGAGTGGAGGAGGTGGAGGGGGAAGAAGGGGGGGGGGGGAGGGGAGG
ACTTTGCCCTTGCCCTCAGTAG
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Synonyms
Publications