NO10G02260.2, NO10G02260.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G02260.2
Unique NameNO10G02260.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4028
Alignment locationchr10:620819..625407 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:620819..625407 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO10G02260.2 vs.
Match: EWM25429.1 (cytochrome p450 [Nannochloropsis gaditana])

HSP 1 Score: 1190.6 bits (3079), Expect = 0.000e+0
Identity = 588/864 (68.06%), Postives = 699/864 (80.90%), Query Frame = 0
Query:    1 MLTAADPQTGQRLPPDNVRDQILTFLLAGHDSTSTAITCLFMLLSQHGDVERKVMEEVERVVGNGPLTFEKLGQLQYCTCVINESLRLFPPAQASRKDAAVDTMLGPYKIPKGMAAIVSLWGLSHNPVHWPDPWKFDPDRWLPERAKNRSPFASLPFSAGHRGCLGRQLSIMEQRSVLARTVQRYHLRLHSLSKPSFTTPLFLKPHGVFISLELRQVSYLSTRLGPSLSDASLARSIPVAAAATVAGAGAPVASGAGKGVMVDATAIPPDTRLLVLYGSNMGTCETFAGELAQHAVKIGMATISMSLDAFLEKKEMTKGAAAVIIISSTYNGTPPDNASRFMKFLE-EPVEVAKVFAGVHFSVFGCGNTQWTRTYQAVPRAIDKALVAAQGKRLTADFACGNADSALDEEYETWKFALWEGLSKSLGISGAQVQPVSGAAGLVPAYVVTLLPGKRKEHQVEKAREFGDVASKWAMKNGLFIGKVLENRELQGTASDRSTRHIEIQLAPEQHYTAGDHLAVQGGNPAEVVARAAAVLEMKLDDMLHVHKASPQVATSSTIPFGVDLTVELILTWCVELQHTVPRAQLAILIDRATCPPEKKALEAMMGAYDTEVNQKKRTLIELLDAYRSTKLTLAELCTLLPPLRPRYYSISSSPLIDAEKASVTVGVVKGYTPTGRLHLGVVSNYLAGLKAGQQVRVFVKDTKSNFRLPPTGTTPIILIGPGTGVAPLRGFLYDREASKATGPAVLFFGCRQDDDFIYREEMEGFKARGVLQELEVAFSRKVPGQRVYVQQLLERKARMLFQMLEAGGHVYVCGDAKHMAPDVRAAIAKILAEGKGLPLTHGPCLVEELVTEKRYLEDVWASG 864
            MLT  DPQTG++LPPDNVRDQILTFLLAGHDSTSTA+T LFMLLSQHGDVERKV+EEVERVVG+ PLTFEKLG+LQYCTCVINESLRLFPPAQA+RKDAA DTMLGPYKI KG A+IVSLWGL+HNP +WPDPW+FDPDRWLPE+AK R+ +AS+PFS GHRGCLGRQLSIMEQR +LA TVQRYHLRLHSLSKPSFTTPLFLKPH +F+SLE R  S L T+   S          P+ +A     A     + A + +  D  ++P +TRL++LYGSNMGTCETFAGELA HAV +GM +  MSLD+FL+K ++  G AAVI+I +TYNGTPPDNA++F+  LE EP +VA++F    F+VFGCGN+QW RTYQ++PR IDK L AAQGKRLTA+F  G+ADS LD++++ WKFA+WEGLS SLG+SGA ++P  GAAGL PAYVVT    + K   +E  +  G++ SKWA++NGLF+GKVL+N+ELQ   SDRST H+EI+LA  Q Y+AGDHLAVQGGNP EVV +AA VL ++L DM H+ KAS +  +SS IP G  L+VE+IL WCVELQ T+ +AQLAIL+DRA+CP EKKALEAM  AY+ EV + KRTLIE+LD Y S ++TLAEL TLLPPLRPRYYSISSSPL  A   SVTVGVV+G +P GRLHLGV SN+LA  K GQ V  FVKDTKSNFRLP  G  PIIL+GPGTGVAP RGFLYDREASKATG AVLFFGCR DDDFIYREE+EGFK RGVL+++ VAFSRK+ G++VYVQ L+E+++  + +MLEAG ++YVCGDAKHMAPDVR A AKILAEGKGLPL+ G  L++EL  +KRY+EDVWASG
Sbjct:  213 MLTTKDPQTGEKLPPDNVRDQILTFLLAGHDSTSTALTVLFMLLSQHGDVERKVLEEVERVVGSEPLTFEKLGRLQYCTCVINESLRLFPPAQATRKDAAEDTMLGPYKISKGTASIVSLWGLAHNPEYWPDPWRFDPDRWLPEKAKGRNSYASIPFSVGHRGCLGRQLSIMEQRCMLAMTVQRYHLRLHSLSKPSFTTPLFLKPHNIFLSLERRACSRLQTQEAKS----------PLTSAVGDENARLNSGARAKRQISTDKASVPFNTRLVILYGSNMGTCETFAGELALHAVNLGMTSDLMSLDSFLDKTDVVNGCAAVIVICATYNGTPPDNAAKFISLLEKEPDKVAEIFTDTPFTVFGCGNSQWVRTYQSIPRFIDKTLTAAQGKRLTANFLYGDADSTLDDDFQAWKFAMWEGLSDSLGMSGASMKPDDGAAGLEPAYVVTPCQAQEK---LEAEKRIGEIRSKWAIQNGLFLGKVLKNKELQSANSDRSTHHVEIELAGAQKYSAGDHLAVQGGNPLEVVRQAAKVLGLELSDMFHIRKASLEAVSSSIIPEGAKLSVEMILMWCVELQQTMSKAQLAILMDRASCPYEKKALEAMRNAYNVEVVKSKRTLIEVLDTYNSVQVTLAELLTLLPPLRPRYYSISSSPLATAGHVSVTVGVVRGDSPAGRLHLGVASNFLASRKVGQLVGCFVKDTKSNFRLPAAGDVPIILVGPGTGVAPFRGFLYDREASKATGTAVLFFGCRNDDDFIYREELEGFKERGVLKDMHVAFSRKLSGRKVYVQHLIEQQSEEMLKMLEAGAYIYVCGDAKHMAPDVRKAFAKILAEGKGLPLSEGDALIDELTIQKRYIEDVWASG 1063          
The following BLAST results are available for this feature:
BLAST of NO10G02260.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25429.10.000e+068.06cytochrome p450 [Nannochloropsis gaditana][more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02260NO10G02260Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G02260.2NO10G02260.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G02260.2.cds1NO10G02260.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G02260.2.cds2NO10G02260.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G02260.2 ID=NO10G02260.2|Name=NO10G02260.2|organism=Nannochloropsis oceanica|type=mRNA|length=4028bp
AACCATAGATCCTTGCCTATCCAATTATGGAATCAGCATACGAGACCCCA
TGCCCTGTGTCAGGCCTGGTCTGCCCAACTACAGGCCCTACCTCCGCCGT
GATACGGACGCTCGTCGTCTACAGAGAAAAGCCTGCATCATCCACGAAGC
CTACCGGGGCACGAGGCACTTCCTCCAGCCTTGCGGCCGTGACCCTTCCC
TTGGGTGCCAGCACTACCCTTGACTCTGTCTATGAAGGCGTGCAGCGAGG
TTTTATCCCCATGTTGGACACAAGCCAGTCATTTTGCATCTGCAGCACTG
CCACCGGGCTACCTTTAAAATTGCGGGATATACACGCAGGGTGTGATCTT
ATCGCCTACGTTGAAGACGGCCGGGCCTCGCCGCACCTTGGTCAGCCTCC
CGAGAGCCTCCCCATCCCTGCTGGCCCTAGGCATAAGCTTTTGGGCAAGA
ATTTCGCGGACTTACGGCCGTTGATTTGCTCGGCACACTTGAGGTTGATG
CATCAATACGGCCCGATTTTCCGGATTACGATGCCACCGAATACGGAGGC
GGTAGTGATATGCGACCCAGACTTGGCCGGGCAAGTGATAGAGAAACCCG
AGGTCTGGCCCAAGACGCATTTTAAGCATAATAAGATGGTGCGGACGTGG
GTGAATAGGGGGCTGTTTACTGCCGATGATGACGAGGAGATTTGGGGGAT
TGCCCATCGGATCCTCTTGCCAGCCTTCAGTAACCAGGGGATGAAGCAGT
ACTTCAATGTGGTTCAGCAATGTATTGAGCGGTTGTTTGTGAATTGGGAT
GGGATGGCCGAGAGGAATCAGCCGGTGGATCTGACCAAGTGCACGGAAAT
GTTCACATTTGATGTGATTGGGCGGGTGGGCTTTGGACACGATTTCAAGG
CACAGGAGACGGGTACCCATCCGTATTTGGAGCAGCTGCAGAAGGCAAGC
AATTACAGCGACGCTCGGTGGGGGCGGGGGTTTCTTCGAACTGTACGTAG
TGGCTGAACTATGGGGGCATGTCATCCTCTTTCTCTTTTCATGTCTATTT
GGGGAGCTTGATTCCAGGCCTGCTCACGTTTTCTACTCATTTCGGCTTCC
TCTTCCACTCTCCCCTCCCCCCAGGTGCTGACCCAAGCTAAATCTTTGAG
GGAGTGGTCCGCCCTCAACCAGCCGAACGTGAAATTCGTCGATACAATCG
TGGCGGAACGACAAGCAGAGCTAGAGAAGGGTATCCGAACAGATGAGAAA
GACGTCCTCACCCTCATGCTTACGGCCGCGGACCCGCAGACGGGCCAGAG
GCTCCCTCCCGACAATGTGCGTGATCAGATCTTGACCTTTCTACTCGCAG
GCCACGATTCGACCTCCACGGCTATCACCTGCCTATTCATGCTCCTGAGT
CAACACGGAGACGTCGAACGCAAAGTTATGGAGGAGGTCGAGCGCGTGGT
AGGGAATGGCCCCCTCACATTCGAAAAACTCGGCCAGCTCCAATACTGCA
CCTGTGTGATCAACGAATCCCTCCGTCTCTTCCCTCCCGCCCAAGCCAGC
CGCAAAGACGCTGCCGTGGACACCATGCTAGGGCCGTACAAAATTCCTAA
AGGCATGGCCGCTATTGTCTCCCTCTGGGGGCTCTCTCACAATCCAGTCC
ACTGGCCAGACCCCTGGAAATTTGACCCCGATCGCTGGCTGCCTGAGCGC
GCCAAAAATCGCAGCCCCTTCGCTTCCCTTCCCTTCTCCGCCGGTCACCG
TGGGTGCTTAGGGCGACAGCTCTCAATAATGGAGCAGCGATCAGTCCTCG
CCCGCACCGTGCAGCGGTACCATCTGCGTCTGCATAGTCTATCAAAGCCC
TCCTTCACCACCCCCCTCTTCCTCAAGCCCCATGGTGTCTTTATCTCCCT
TGAACTCCGGCAGGTGTCATACCTGAGCACACGACTAGGACCTTCTTTGT
CTGATGCCTCTCTTGCTCGCTCTATCCCTGTAGCTGCTGCTGCTACCGTT
GCTGGTGCTGGTGCACCTGTTGCGTCCGGGGCGGGGAAGGGAGTGATGGT
GGACGCGACTGCTATTCCGCCCGATACCCGACTGCTGGTCTTGTATGGAA
GTAACATGGGCACGTGCGAGACTTTCGCGGGTGAGCTGGCACAACACGCA
GTGAAGATTGGGATGGCTACAATTTCGATGAGCCTCGATGCATTCTTGGA
GAAGAAGGAAATGACAAAGGGCGCGGCTGCTGTGATAATCATTTCGTCGA
CGTACAATGGGACCCCTCCTGATAATGCCAGTCGCTTCATGAAGTTCCTG
GAGGAGCCCGTGGAGGTAGCCAAGGTGTTTGCCGGGGTGCATTTCTCTGT
TTTCGGGTGCGGGAACACCCAGTGGACTCGCACGTATCAGGCCGTCCCCC
GCGCAATCGATAAGGCTTTGGTGGCCGCTCAGGGGAAGAGACTAACAGCA
GATTTTGCATGTGGTAATGCGGACTCGGCGTTGGACGAAGAATATGAGAC
ATGGAAATTTGCGCTGTGGGAGGGGCTGAGCAAAAGTCTGGGGATTTCGG
GAGCGCAGGTGCAACCGGTGTCGGGGGCGGCGGGATTGGTGCCTGCTTAT
GTCGTCACGCTGCTTCCGGGCAAGCGGAAGGAGCACCAGGTGGAAAAGGC
ACGTGAATTCGGTGACGTGGCTAGTAAATGGGCTATGAAGAATGGATTGT
TTATTGGAAAGGTGCTTGAAAATCGGGAGCTGCAGGGCACGGCTTCGGAT
CGTTCCACACGTCATATCGAGATTCAATTAGCGCCTGAGCAGCATTATAC
AGCGGGCGATCATTTGGCGGTACAGGGGGGAAACCCCGCCGAGGTGGTGG
CCCGCGCAGCGGCCGTGCTGGAGATGAAGTTGGATGATATGCTGCACGTG
CATAAGGCTAGTCCGCAAGTAGCAACTTCTTCAACCATCCCTTTTGGTGT
CGACTTGACTGTGGAGCTCATTTTGACTTGGTGCGTAGAATTGCAACACA
CGGTGCCTCGGGCGCAACTGGCCATTTTGATCGACCGTGCCACGTGCCCT
CCAGAGAAGAAGGCATTGGAGGCCATGATGGGGGCTTATGACACGGAAGT
TAACCAGAAGAAGAGGACGCTGATTGAGCTCTTAGATGCTTATCGTTCTA
CCAAGCTGACCCTTGCGGAGCTGTGCACGCTGCTGCCACCTCTGCGCCCC
CGCTACTACTCCATTTCCTCCTCCCCGCTCATCGATGCTGAGAAGGCTTC
GGTCACCGTGGGAGTTGTCAAGGGATATACCCCTACCGGTCGCTTGCATC
TGGGTGTGGTTTCGAATTATCTGGCAGGGCTGAAGGCAGGGCAGCAAGTG
CGAGTATTTGTGAAGGACACGAAGAGCAACTTCCGTTTGCCACCAACTGG
GACCACGCCTATAATCTTGATCGGCCCCGGCACGGGCGTGGCACCATTAA
GGGGATTCTTGTATGATCGCGAGGCGAGCAAGGCCACGGGACCTGCTGTT
CTCTTCTTTGGGTGCCGGCAAGACGACGATTTCATCTATCGGGAGGAGAT
GGAGGGATTCAAAGCACGGGGAGTGCTGCAAGAGTTGGAGGTGGCTTTTT
CGAGGAAGGTCCCGGGGCAGCGCGTGTATGTGCAGCAGTTGTTGGAGAGA
AAGGCGAGAATGCTGTTTCAGATGCTCGAGGCGGGGGGACATGTGTATGT
GTGTGGGGATGCCAAGCACATGGCGCCCGATGTGCGAGCTGCCATCGCAA
AAATATTGGCTGAGGGTAAGGGGTTGCCATTGACTCATGGACCTTGTCTG
GTGGAAGAGCTCGTCACCGAGAAAAGGTATCTGGAGGATGTGTGGGCTTC
AGGGTAGATTTCAGTTAAAGAGAAGCAAGAGAAGTTGAAAATTCTATGTA
TGATGGTCATACAAAAATTGTGTGAGAGTCTTCGTAAGGCAGCAAAAACA
AAGTCTCAGGAAGCGATGACGGCATACACACAGCTAGCGCACAGGCTGTC
AAAAAAAAAGGTGGAAACTTCAATTTTT
back to top

protein sequence of NO10G02260.2

>NO10G02260.2-protein ID=NO10G02260.2-protein|Name=NO10G02260.2|organism=Nannochloropsis oceanica|type=polypeptide|length=864bp
MLTAADPQTGQRLPPDNVRDQILTFLLAGHDSTSTAITCLFMLLSQHGDV
ERKVMEEVERVVGNGPLTFEKLGQLQYCTCVINESLRLFPPAQASRKDAA
VDTMLGPYKIPKGMAAIVSLWGLSHNPVHWPDPWKFDPDRWLPERAKNRS
PFASLPFSAGHRGCLGRQLSIMEQRSVLARTVQRYHLRLHSLSKPSFTTP
LFLKPHGVFISLELRQVSYLSTRLGPSLSDASLARSIPVAAAATVAGAGA
PVASGAGKGVMVDATAIPPDTRLLVLYGSNMGTCETFAGELAQHAVKIGM
ATISMSLDAFLEKKEMTKGAAAVIIISSTYNGTPPDNASRFMKFLEEPVE
VAKVFAGVHFSVFGCGNTQWTRTYQAVPRAIDKALVAAQGKRLTADFACG
NADSALDEEYETWKFALWEGLSKSLGISGAQVQPVSGAAGLVPAYVVTLL
PGKRKEHQVEKAREFGDVASKWAMKNGLFIGKVLENRELQGTASDRSTRH
IEIQLAPEQHYTAGDHLAVQGGNPAEVVARAAAVLEMKLDDMLHVHKASP
QVATSSTIPFGVDLTVELILTWCVELQHTVPRAQLAILIDRATCPPEKKA
LEAMMGAYDTEVNQKKRTLIELLDAYRSTKLTLAELCTLLPPLRPRYYSI
SSSPLIDAEKASVTVGVVKGYTPTGRLHLGVVSNYLAGLKAGQQVRVFVK
DTKSNFRLPPTGTTPIILIGPGTGVAPLRGFLYDREASKATGPAVLFFGC
RQDDDFIYREEMEGFKARGVLQELEVAFSRKVPGQRVYVQQLLERKARML
FQMLEAGGHVYVCGDAKHMAPDVRAAIAKILAEGKGLPLTHGPCLVEELV
TEKRYLEDVWASG*
back to top

mRNA from alignment at chr10:620819..625407+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G02260.2 ID=NO10G02260.2|Name=NO10G02260.2|organism=Nannochloropsis oceanica|type=mRNA|length=4589bp|location=Sequence derived from alignment at chr10:620819..625407+ (Nannochloropsis oceanica)
AACCATAGATCCTTGCCTATCCAATTATGGAATCAGCATACGAGACCCCA TGCCCTGTGTCAGGCCTGGTCTGCCCAACTACAGGCCCTACCTCCGCCGT GATACGGACGCTCGTCGTCTACAGTAAGTCCCCATCGATCTGATCTCCCT GTCCCTCGCCGACTTTCTTCACCTCTCAGCAGCATGTCTGGAGTGCGCCG TGAGAAATTTCAAAGCCGCACTTTGTCCTTGGCTACACTCCTGCGAGCTC AATGTCAAGTCCCCTTCCATTTTGCCGAAACGCTGCTGGGGTGGGTCAAG AACCTTTCACACCCACAGATCATCGACGGTAGTCCATCACAAACGACGAC GGACTTCTTACCACAAGAAAATACCTGTCAAAATCCCTTCGACTCGCACA CAAACACCTATACCCATACACTCAAACCCACACCCACCCACCCACCCACC CACCCACCCACCCACACAAACACACCCTCATTACTCTCCCTTTTCACACT TCAACCAAACAACAGGAGAAAAGCCTGCATCATCCACGAAGCCTACCGGG GCACGAGGCACTTCCTCCAGCCTTGCGGCCGTGACCCTTCCCTTGGGTGC CAGCACTACCCTTGACTCTGTCTATGAAGGCGTGCAGCGAGGTTTTATCC CCATGTTGGACACAAGCCAGTCATTTTGCATCTGCAGCACTGCCACCGGG CTACCTTTAAAATTGCGGGATATACACGCAGGGTGTGATCTTATCGCCTA CGTTGAAGACGGCCGGGCCTCGCCGCACCTTGGTCAGCCTCCCGAGAGCC TCCCCATCCCTGCTGGCCCTAGGCATAAGCTTTTGGGCAAGAATTTCGCG GACTTACGGCCGTTGATTTGCTCGGCACACTTGAGGTTGATGCATCAATA CGGCCCGATTTTCCGGATTACGATGCCACCGAATACGGAGGCGGTAGTGA TATGCGACCCAGACTTGGCCGGGCAAGTGATAGAGAAACCCGAGGTCTGG CCCAAGACGCATTTTAAGCATAATAAGATGGTGCGGACGTGGGTGAATAG GGGGCTGTTTACTGCCGATGATGACGAGGAGATTTGGGGGATTGCCCATC GGATCCTCTTGCCAGCCTTCAGTAACCAGGGGATGAAGCAGTACTTCAAT GTGGTTCAGCAATGTATTGAGCGGTTGTTTGTGAATTGGGATGGGATGGC CGAGAGGAATCAGCCGGTGGATCTGACCAAGTGCACGGAAATGTTCACAT TTGATGTGATTGGGCGGGTGGGCTTTGGACACGATTTCAAGGCACAGGAG ACGGGTACCCATCCGTATTTGGAGCAGCTGCAGAAGGCAAGCAATTACAG CGACGCTCGGTGGGGGCGGGGGTTTCTTCGAACTGTACGTAGTGGCTGAA CTATGGGGGCATGTCATCCTCTTTCTCTTTTCATGTCTATTTGGGGAGCT TGATTCCAGGCCTGCTCACGTTTTCTACTCATTTCGGCTTCCTCTTCCAC TCTCCCCTCCCCCCAGGTGCTGACCCAAGCTAAATCTTTGAGGGAGTGGT CCGCCCTCAACCAGCCGAACGTGAAATTCGTCGATACAATCGTGGCGGAA CGACAAGCAGAGCTAGAGAAGGGTATCCGAACAGATGAGAAAGACGTCCT CACCCTCATGCTTACGGCCGCGGACCCGCAGACGGGCCAGAGGCTCCCTC CCGACAATGTGCGTGATCAGATCTTGACCTTTCTACTCGCAGGCCACGAT TCGGTACGTCACAAATTATCTCTTTATCCCTACTCTTCTTCCCTTCCTCT CTTCATGATTTCTCCCCACTTTGTGTTTTTTGTATGTCCTGAAAGTCAGC ACAATTCGTCCAGCATCTGCCTTTCTCACATTTCCTCTTGCCCTCCTTCC CTCTTTCTCGCCCTCTCGCTAGACCTCCACGGCTATCACCTGCCTATTCA TGCTCCTGAGTCAACACGGAGACGTCGAACGCAAAGTTATGGAGGAGGTC GAGCGCGTGGTAGGGAATGGCCCCCTCACATTCGAAAAACTCGGCCAGCT CCAATACTGCACCTGTGTGATCAACGAATCCCTCCGTCTCTTCCCTCCCG CCCAAGCCAGCCGCAAAGACGCTGCCGTGGACACCATGCTAGGGCCGTAC AAAATTCCTAAAGGCATGGCCGCTATTGTCTCCCTCTGGGGGCTCTCTCA CAATCCAGTCCACTGGCCAGACCCCTGGAAATTTGACCCCGATCGCTGGC TGCCTGAGCGCGCCAAAAATCGCAGCCCCTTCGCTTCCCTTCCCTTCTCC GCCGGTCACCGTGGGTGCTTAGGGCGACAGCTCTCAATAATGGAGCAGCG ATCAGTCCTCGCCCGCACCGTGCAGCGGTACCATCTGCGTCTGCATAGTC TATCAAAGCCCTCCTTCACCACCCCCCTCTTCCTCAAGCCCCATGGTGTC TTTATCTCCCTTGAACTCCGGCAGGTGTCATACCTGAGCACACGACTAGG ACCTTCTTTGTCTGATGCCTCTCTTGCTCGCTCTATCCCTGTAGCTGCTG CTGCTACCGTTGCTGGTGCTGGTGCACCTGTTGCGTCCGGGGCGGGGAAG GGAGTGATGGTGGACGCGACTGCTATTCCGCCCGATACCCGACTGCTGGT CTTGTATGGAAGTAACATGGGCACGTGCGAGACTTTCGCGGGTGAGCTGG CACAACACGCAGTGAAGATTGGGATGGCTACAATTTCGATGAGCCTCGAT GCATTCTTGGAGAAGAAGGAAATGACAAAGGGCGCGGCTGCTGTGATAAT CATTTCGTCGACGTACAATGGGACCCCTCCTGATAATGCCAGTCGCTTCA TGAAGTTCCTGGAGGAGCCCGTGGAGGTAGCCAAGGTGTTTGCCGGGGTG CATTTCTCTGTTTTCGGGTGCGGGAACACCCAGTGGACTCGCACGTATCA GGCCGTCCCCCGCGCAATCGATAAGGCTTTGGTGGCCGCTCAGGGGAAGA GACTAACAGCAGATTTTGCATGTGGTAATGCGGACTCGGCGTTGGACGAA GAATATGAGACATGGAAATTTGCGCTGTGGGAGGGGCTGAGCAAAAGTCT GGGGATTTCGGGAGCGCAGGTGCAACCGGTGTCGGGGGCGGCGGGATTGG TGCCTGCTTATGTCGTCACGCTGCTTCCGGGCAAGCGGAAGGAGCACCAG GTGGAAAAGGCACGTGAATTCGGTGACGTGGCTAGTAAATGGGCTATGAA GAATGGATTGTTTATTGGAAAGGTGCTTGAAAATCGGGAGCTGCAGGGCA CGGCTTCGGATCGTTCCACACGTCATATCGAGATTCAATTAGCGCCTGAG CAGCATTATACAGCGGGCGATCATTTGGCGGTACAGGGGGGAAACCCCGC CGAGGTGGTGGCCCGCGCAGCGGCCGTGCTGGAGATGAAGTTGGATGATA TGCTGCACGTGCATAAGGCTAGTCCGCAAGTAGCAACTTCTTCAACCATC CCTTTTGGTGTCGACTTGACTGTGGAGCTCATTTTGACTTGGTGCGTAGA ATTGCAACACACGGTGCCTCGGGCGCAACTGGCCATTTTGATCGACCGTG CCACGTGCCCTCCAGAGAAGAAGGCATTGGAGGCCATGATGGGGGCTTAT GACACGGAAGTTAACCAGAAGAAGAGGACGCTGATTGAGCTCTTAGATGC TTATCGTTCTACCAAGCTGACCCTTGCGGAGCTGTGCACGCTGCTGCCAC CTCTGCGCCCCCGCTACTACTCCATTTCCTCCTCCCCGCTCATCGATGCT GAGAAGGCTTCGGTCACCGTGGGAGTTGTCAAGGGATATACCCCTACCGG TCGCTTGCATCTGGGTGTGGTTTCGAATTATCTGGCAGGGCTGAAGGCAG GGCAGCAAGTGCGAGTATTTGTGAAGGACACGAAGAGCAACTTCCGTTTG CCACCAACTGGGACCACGCCTATAATCTTGATCGGCCCCGGCACGGGCGT GGCACCATTAAGGGGATTCTTGTATGATCGCGAGGCGAGCAAGGCCACGG GACCTGCTGTTCTCTTCTTTGGGTGCCGGCAAGACGACGATTTCATCTAT CGGGAGGAGATGGAGGGATTCAAAGCACGGGGAGTGCTGCAAGAGTTGGA GGTGGCTTTTTCGAGGAAGGTCCCGGGGCAGCGCGTGTATGTGCAGCAGT TGTTGGAGAGAAAGGCGAGAATGCTGTTTCAGATGCTCGAGGCGGGGGGA CATGTGTATGTGTGTGGGGATGCCAAGCACATGGCGCCCGATGTGCGAGC TGCCATCGCAAAAATATTGGCTGAGGGTAAGGGGTTGCCATTGACTCATG GACCTTGTCTGGTGGAAGAGCTCGTCACCGAGAAAAGGTATCTGGAGGAT GTGTGGGCTTCAGGGTAGATTTCAGTTAAAGAGAAGCAAGAGAAGTTGAA AATTCTATGTATGATGGTCATACAAAAATTGTGTGAGAGTCTTCGTAAGG CAGCAAAAACAAAGTCTCAGGAAGCGATGACGGCATACACACAGCTAGCG CACAGGCTGTCAAAAAAAAAGGTGGAAACTTCAATTTTT
back to top

Coding sequence (CDS) from alignment at chr10:620819..625407+

>NO10G02260.2 ID=NO10G02260.2|Name=NO10G02260.2|organism=Nannochloropsis oceanica|type=CDS|length=2592bp|location=Sequence derived from alignment at chr10:620819..625407+ (Nannochloropsis oceanica)
ATGCTTACGGCCGCGGACCCGCAGACGGGCCAGAGGCTCCCTCCCGACAA
TGTGCGTGATCAGATCTTGACCTTTCTACTCGCAGGCCACGATTCGACCT
CCACGGCTATCACCTGCCTATTCATGCTCCTGAGTCAACACGGAGACGTC
GAACGCAAAGTTATGGAGGAGGTCGAGCGCGTGGTAGGGAATGGCCCCCT
CACATTCGAAAAACTCGGCCAGCTCCAATACTGCACCTGTGTGATCAACG
AATCCCTCCGTCTCTTCCCTCCCGCCCAAGCCAGCCGCAAAGACGCTGCC
GTGGACACCATGCTAGGGCCGTACAAAATTCCTAAAGGCATGGCCGCTAT
TGTCTCCCTCTGGGGGCTCTCTCACAATCCAGTCCACTGGCCAGACCCCT
GGAAATTTGACCCCGATCGCTGGCTGCCTGAGCGCGCCAAAAATCGCAGC
CCCTTCGCTTCCCTTCCCTTCTCCGCCGGTCACCGTGGGTGCTTAGGGCG
ACAGCTCTCAATAATGGAGCAGCGATCAGTCCTCGCCCGCACCGTGCAGC
GGTACCATCTGCGTCTGCATAGTCTATCAAAGCCCTCCTTCACCACCCCC
CTCTTCCTCAAGCCCCATGGTGTCTTTATCTCCCTTGAACTCCGGCAGGT
GTCATACCTGAGCACACGACTAGGACCTTCTTTGTCTGATGCCTCTCTTG
CTCGCTCTATCCCTGTAGCTGCTGCTGCTACCGTTGCTGGTGCTGGTGCA
CCTGTTGCGTCCGGGGCGGGGAAGGGAGTGATGGTGGACGCGACTGCTAT
TCCGCCCGATACCCGACTGCTGGTCTTGTATGGAAGTAACATGGGCACGT
GCGAGACTTTCGCGGGTGAGCTGGCACAACACGCAGTGAAGATTGGGATG
GCTACAATTTCGATGAGCCTCGATGCATTCTTGGAGAAGAAGGAAATGAC
AAAGGGCGCGGCTGCTGTGATAATCATTTCGTCGACGTACAATGGGACCC
CTCCTGATAATGCCAGTCGCTTCATGAAGTTCCTGGAGGAGCCCGTGGAG
GTAGCCAAGGTGTTTGCCGGGGTGCATTTCTCTGTTTTCGGGTGCGGGAA
CACCCAGTGGACTCGCACGTATCAGGCCGTCCCCCGCGCAATCGATAAGG
CTTTGGTGGCCGCTCAGGGGAAGAGACTAACAGCAGATTTTGCATGTGGT
AATGCGGACTCGGCGTTGGACGAAGAATATGAGACATGGAAATTTGCGCT
GTGGGAGGGGCTGAGCAAAAGTCTGGGGATTTCGGGAGCGCAGGTGCAAC
CGGTGTCGGGGGCGGCGGGATTGGTGCCTGCTTATGTCGTCACGCTGCTT
CCGGGCAAGCGGAAGGAGCACCAGGTGGAAAAGGCACGTGAATTCGGTGA
CGTGGCTAGTAAATGGGCTATGAAGAATGGATTGTTTATTGGAAAGGTGC
TTGAAAATCGGGAGCTGCAGGGCACGGCTTCGGATCGTTCCACACGTCAT
ATCGAGATTCAATTAGCGCCTGAGCAGCATTATACAGCGGGCGATCATTT
GGCGGTACAGGGGGGAAACCCCGCCGAGGTGGTGGCCCGCGCAGCGGCCG
TGCTGGAGATGAAGTTGGATGATATGCTGCACGTGCATAAGGCTAGTCCG
CAAGTAGCAACTTCTTCAACCATCCCTTTTGGTGTCGACTTGACTGTGGA
GCTCATTTTGACTTGGTGCGTAGAATTGCAACACACGGTGCCTCGGGCGC
AACTGGCCATTTTGATCGACCGTGCCACGTGCCCTCCAGAGAAGAAGGCA
TTGGAGGCCATGATGGGGGCTTATGACACGGAAGTTAACCAGAAGAAGAG
GACGCTGATTGAGCTCTTAGATGCTTATCGTTCTACCAAGCTGACCCTTG
CGGAGCTGTGCACGCTGCTGCCACCTCTGCGCCCCCGCTACTACTCCATT
TCCTCCTCCCCGCTCATCGATGCTGAGAAGGCTTCGGTCACCGTGGGAGT
TGTCAAGGGATATACCCCTACCGGTCGCTTGCATCTGGGTGTGGTTTCGA
ATTATCTGGCAGGGCTGAAGGCAGGGCAGCAAGTGCGAGTATTTGTGAAG
GACACGAAGAGCAACTTCCGTTTGCCACCAACTGGGACCACGCCTATAAT
CTTGATCGGCCCCGGCACGGGCGTGGCACCATTAAGGGGATTCTTGTATG
ATCGCGAGGCGAGCAAGGCCACGGGACCTGCTGTTCTCTTCTTTGGGTGC
CGGCAAGACGACGATTTCATCTATCGGGAGGAGATGGAGGGATTCAAAGC
ACGGGGAGTGCTGCAAGAGTTGGAGGTGGCTTTTTCGAGGAAGGTCCCGG
GGCAGCGCGTGTATGTGCAGCAGTTGTTGGAGAGAAAGGCGAGAATGCTG
TTTCAGATGCTCGAGGCGGGGGGACATGTGTATGTGTGTGGGGATGCCAA
GCACATGGCGCCCGATGTGCGAGCTGCCATCGCAAAAATATTGGCTGAGG
GTAAGGGGTTGCCATTGACTCATGGACCTTGTCTGGTGGAAGAGCTCGTC
ACCGAGAAAAGGTATCTGGAGGATGTGTGGGCTTCAGGGTAG
back to top
Synonyms
Publications