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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr10 | genome | chr10:614027..616238 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO10G02230.1 vs.
Match: EWM25460.1 (fructose- -bisphosphatase [Nannochloropsis gaditana]) HSP 1 Score: 717.2 bits (1850), Expect = 3.400e-203 Identity = 356/409 (87.04%), Postives = 379/409 (92.67%), Query Frame = 0
Query: 43 VLSLTMMPFATTRAFVLPRYSPRLEQLLVRSATTIPQTPAAPSSTTNSRGQFPLIEPVFDEVCEMSGVTLTRYMMEVSRANPHLKEVESLMNSIQTACKTISSLVNRACITKMTGYQDDGCSINVQGEQQKKLDVLTNDVLKKALRFTGRLTVLASEEEDAPVTMEDRERIYADKRDSDVVVEEGNKYVACFDPLDGSSNVDASIPVGTIFGIFANGDEKECLLDDEDLEGGAMDPESRAAKCLMSTLQPGTNLVAAGYCLYSSSTHLVFTLGKGVNGFTYDTHIGEFVLTHPNIRIPERGQIYSFNEANRWDWDKPMQEYVTALQMGQGESGKRYSSRYIGSMVGDVHRTLLYGGIFGYPADANNKDGKLRLLYEAAPMAFLVEQAGGLALTGKNRIMEIRPRGVHQR 452
+L L + + R FV+PR + + + ATTIP+TPA S+ +N R Q+PLIEPVFDEVCEMSGVTLTRYMME+SRANPHLKE+ESLMNSIQTACKTISSLVNRACITKMTGYQDDGCSINVQGEQQKKLDVLTNDVLKKALRFTGRLTVLASEEED PV+MEDRERIYAD R+SDVV+EEGNKYVACFDPLDGSSNVDASIPVGTIFGIFA+G+E ECLLDDEDL+G MDPESRAAKCLMSTLQPGTNLVAAGYCLYSSS HLVFTLG+GVNGFTYDTHIGEFVLTHPNIRIPERGQIYSFNEANRWDWD PMQEYVT+LQMGQG+SGKRYSSRYIGSMVGDVHRTLLYGGIFGYPADA N+DGKLRLLYEAAPMAFLVEQAGGLALTGKNRIMEIRPRGVHQR
Sbjct: 12 ILCLVALSSSACRGFVVPRSVSKHARSVQSRATTIPETPATSSTVSNQR-QYPLIEPVFDEVCEMSGVTLTRYMMEISRANPHLKEIESLMNSIQTACKTISSLVNRACITKMTGYQDDGCSINVQGEQQKKLDVLTNDVLKKALRFTGRLTVLASEEEDEPVSMEDRERIYADLRNSDVVLEEGNKYVACFDPLDGSSNVDASIPVGTIFGIFASGEETECLLDDEDLDGTPMDPESRAAKCLMSTLQPGTNLVAAGYCLYSSSAHLVFTLGRGVNGFTYDTHIGEFVLTHPNIRIPERGQIYSFNEANRWDWDSPMQEYVTSLQMGQGQSGKRYSSRYIGSMVGDVHRTLLYGGIFGYPADAQNRDGKLRLLYEAAPMAFLVEQAGGLALTGKNRIMEIRPRGVHQR 419
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO10G02230.1 ID=NO10G02230.1|Name=NO10G02230.1|organism=Nannochloropsis oceanica|type=mRNA|length=1473bp ATGTGCGTTCCGATCTTCTGCTTTTGGGAATTTGGCGAGGAAATGATCGC GATTGAAGTGCGGCTTGGACCTCGGACCAAGCTCTGTCAAGTGGCGTCTG CAAGGCCAACCATGCGAAGCTACGCGGTGCTTTCCCTCACCATGATGCCC TTCGCCACGACAAGGGCATTTGTTTTACCTCGATACAGCCCTCGTCTCGA GCAGCTGTTGGTCCGCAGTGCCACCACCATTCCGCAAACGCCAGCCGCTC CTTCCTCGACGACAAACTCACGTGGTCAATTCCCTTTGATCGAACCAGTT TTTGACGAAGTCTGCGAGATGAGCGGCGTGACTCTTACTCGATATATGAT GGAAGTAAGCCGCGCCAATCCCCACCTCAAGGAGGTTGAGTCCTTGATGA ACAGCATCCAAACGGCTTGTAAGACCATTTCCAGCCTGGTCAACCGCGCA TGCATCACTAAAATGACCGGGTACCAAGACGATGGCTGCTCCATCAACGT TCAAGGCGAGCAACAGAAGAAGCTCGATGTCCTGACGAATGATGTGCTCA AGAAAGCACTCCGGTTCACAGGCAGGCTCACCGTGCTCGCCTCCGAAGAG GAAGATGCGCCTGTCACCATGGAGGACCGCGAGCGGATCTATGCGGACAA GCGCGATTCTGACGTGGTGGTGGAGGAGGGCAATAAATACGTCGCCTGCT TCGATCCCTTGGATGGCAGCTCGAACGTTGACGCCTCAATCCCGGTCGGG ACAATCTTTGGCATCTTCGCCAATGGCGATGAGAAGGAGTGTTTGCTCGA TGATGAAGACTTGGAAGGAGGTGCCATGGATCCTGAATCCCGTGCGGCCA AGTGTCTGATGAGCACGCTTCAGCCGGGAACGAATCTAGTGGCGGCAGGC TATTGCCTATACAGTTCCTCGACCCATTTGGTGTTTACCCTCGGGAAAGG CGTGAATGGTTTTACCTACGACACGCACATTGGCGAGTTCGTTTTGACGC ACCCCAATATTCGGATTCCCGAACGAGGGCAGATATACAGCTTTAATGAA GCGAATCGATGGGATTGGGATAAGCCCATGCAGGAATACGTCACCGCCCT CCAAATGGGCCAGGGCGAATCGGGCAAACGCTATTCCTCGCGTTACATCG GTTCCATGGTCGGGGACGTCCACCGCACCCTCCTCTACGGCGGCATTTTT GGATACCCCGCTGACGCGAACAACAAAGACGGGAAACTCCGTCTGCTCTA CGAGGCAGCACCAATGGCCTTCCTGGTCGAGCAAGCAGGAGGTTTGGCAT TGACGGGGAAGAACCGAATCATGGAAATCAGGCCAAGAGGAGTCCATCAG CGGGTGCCGTGTATTTTGGGGTCAAGGGAGGATGTAGAGGAATTGCGAAG TTTTTACAACGCGAGCAAGGACCCGGATCTCATCCGTCGGTGCATTGAGC GTTTGAATTCGGCGTCTTCATAA back to topprotein sequence of NO10G02230.1 >NO10G02230.1-protein ID=NO10G02230.1-protein|Name=NO10G02230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=491bp MCVPIFCFWEFGEEMIAIEVRLGPRTKLCQVASARPTMRSYAVLSLTMMP FATTRAFVLPRYSPRLEQLLVRSATTIPQTPAAPSSTTNSRGQFPLIEPV FDEVCEMSGVTLTRYMMEVSRANPHLKEVESLMNSIQTACKTISSLVNRA CITKMTGYQDDGCSINVQGEQQKKLDVLTNDVLKKALRFTGRLTVLASEE EDAPVTMEDRERIYADKRDSDVVVEEGNKYVACFDPLDGSSNVDASIPVG TIFGIFANGDEKECLLDDEDLEGGAMDPESRAAKCLMSTLQPGTNLVAAG YCLYSSSTHLVFTLGKGVNGFTYDTHIGEFVLTHPNIRIPERGQIYSFNE ANRWDWDKPMQEYVTALQMGQGESGKRYSSRYIGSMVGDVHRTLLYGGIF GYPADANNKDGKLRLLYEAAPMAFLVEQAGGLALTGKNRIMEIRPRGVHQ RVPCILGSREDVEELRSFYNASKDPDLIRRCIERLNSASS* back to topmRNA from alignment at chr10:614027..616238- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO10G02230.1 ID=NO10G02230.1|Name=NO10G02230.1|organism=Nannochloropsis oceanica|type=mRNA|length=2212bp|location=Sequence derived from alignment at chr10:614027..616238- (Nannochloropsis oceanica) ATGTGCGTTCCGATCTTCTGCTTTTGGGAATTTGGCGAGGAAATGATCGC
GATTGAAGTGCGGCTTGGACCTCGGACCAAGCTCTGGTAAGCACTCCCTC
CCACCCAAAAACACTCTCAATGTCCCTCACGTATACAGCAAGGTGCCCAG
GACATGCTGGCTCTACTCAGCGCAACAATTCATGGCCTCACATTCTTGTC
CAACCCCGCCCGTTCCTCACCCGCCTTCCCGCGTCACACACCATACGGCA
TACATACAGTCAAGTGGCGTCTGCAAGGCCAACCATGCGAAGCTACGCGG
TGCTTTCCCTCACCATGATGCCCTTCGCCACGACAAGGGCATTTGTTTTA
CCTCGATACAGCCCTCGTCTCGAGCAGCTGTTGGTCCGCAGGTACGTCGT
GTGCTCGTCGCCTTGCACATTTATATGGGGCATGTCCCGCGCATGCATTA
TGTTCAGTCCCTAATTTGACGTGTCACAAATGCTTGTATGGTCGTCTCAA
TCTTGTAGACGACCAAATATCTTCGCATTTTTCACCTTGCAAGGACCACT
CATGGAACTTGACCACTCTACTCCCGTTTGCAGTGCCACCACCATTCCGC
AAACGCCAGCCGCTCCTTCCTCGACGACAAACTCACGTGGTCAATTCCCT
TTGATCGAACCAGTTTTTGACGAAGTCTGCGAGATGAGCGGCGTGACTCT
TACTCGATATATGATGGAAGTAAGCCGCGCCAATCCCCACCTCAAGGAGG
TTGAGTCCTTGATGAACAGCATCCAAACGGCTTGTAAGGTGCGTTACATG
AGTGGGTTAAGGGTTGGGATGATTGCGACATCTTTTTGATCAGCAAGCTC
TGTCTTTCATGTCGTCAAATCATATTGATCCCCATGCCCTCACAAACACC
ATCGACCCACTCCATCCTCCATCACCCGCCACCCCTCACCCCTCAAAAGA
CCATTTCCAGCCTGGTCAACCGCGCATGCATCACTAAAATGACCGGGTAC
CAAGACGATGGCTGCTCCATCAACGTTCAAGGCGAGCAACAGAAGAAGCT
CGATGTCCTGACGAATGATGTGCTCAAGAAAGCACTCCGGTTCACAGGCA
GGCTCACCGTGCTCGCCTCCGAAGAGGAAGATGCGCCTGTCACCATGGAG
GACCGCGAGCGGATCTATGCGGACAAGCGCGATTCTGACGTGGTGGTGGA
GGAGGGCAATAAATACGTCGCCTGCTTCGATCCCTTGGATGGCAGCTCGA
ACGTTGACGCCTCAATCCCGGTCGGGACAATCTTTGGCATCTTCGCCAAT
GGCGATGAGAAGGAGTGTTTGCTCGATGATGAAGACTTGGAAGGAGGTGC
CATGGATCCTGAATCCCGTGCGGCCAAGTGTCTGATGAGCACGCTTCAGC
CGGGAACGAATCTAGTGGTACGGATTGGTGCCGTTTGTGGTGATGCGGTT
AATACTTCTACATCGGCATTTTCTTCCTTCCCTTTCGCCCTCCCTTCTTC
CTCCTTTCTCACGCATACATCTTATATTCTTCCCCTTCCCCTTCACTCAT
GACCAGGCGGCAGGCTATTGCCTATACAGTTCCTCGACCCATTTGGTGTT
TACCCTCGGGAAAGGCGTGAATGGTTTTACCTACGACACGCACATTGGCG
AGTTCGTTTTGACGCACCCCAATATTCGGATTCCCGAACGAGGGCAGATA
TACAGCTTTAATGAAGCGAATCGATGGGATTGGGATAAGCCCATGCAGGT
AAGAATAGATCCAAATCTATCGGAAATCCAACGCATGTATGCTCCCTCTC
TGATTCATCTCCCTCCCAATAGGAATACGTCACCGCCCTCCAAATGGGCC
AGGGCGAATCGGGCAAACGCTATTCCTCGCGTTACATCGGTTCCATGGTC
GGGGACGTCCACCGCACCCTCCTCTACGGCGGCATTTTTGGATACCCCGC
TGACGCGAACAACAAAGACGGGAAACTCCGTCTGCTCTACGAGGCAGCAC
CAATGGCCTTCCTGGTCGAGCAAGCAGGAGGTTTGGCATTGACGGGGAAG
AACCGAATCATGGAAATCAGGCCAAGAGGAGTCCATCAGCGGGTGCCGTG
TATTTTGGGGTCAAGGGAGGATGTAGAGGAATTGCGAAGTTTTTACAACG
CGAGCAAGGACCCGGATCTCATCCGTCGGTGCATTGAGCGTTTGAATTCG
GCGTCTTCATAA back to topCoding sequence (CDS) from alignment at chr10:614027..616238- >NO10G02230.1 ID=NO10G02230.1|Name=NO10G02230.1|organism=Nannochloropsis oceanica|type=CDS|length=1473bp|location=Sequence derived from alignment at chr10:614027..616238- (Nannochloropsis oceanica) ATGTGCGTTCCGATCTTCTGCTTTTGGGAATTTGGCGAGGAAATGATCGC GATTGAAGTGCGGCTTGGACCTCGGACCAAGCTCTGTCAAGTGGCGTCTG CAAGGCCAACCATGCGAAGCTACGCGGTGCTTTCCCTCACCATGATGCCC TTCGCCACGACAAGGGCATTTGTTTTACCTCGATACAGCCCTCGTCTCGA GCAGCTGTTGGTCCGCAGTGCCACCACCATTCCGCAAACGCCAGCCGCTC CTTCCTCGACGACAAACTCACGTGGTCAATTCCCTTTGATCGAACCAGTT TTTGACGAAGTCTGCGAGATGAGCGGCGTGACTCTTACTCGATATATGAT GGAAGTAAGCCGCGCCAATCCCCACCTCAAGGAGGTTGAGTCCTTGATGA ACAGCATCCAAACGGCTTGTAAGACCATTTCCAGCCTGGTCAACCGCGCA TGCATCACTAAAATGACCGGGTACCAAGACGATGGCTGCTCCATCAACGT TCAAGGCGAGCAACAGAAGAAGCTCGATGTCCTGACGAATGATGTGCTCA AGAAAGCACTCCGGTTCACAGGCAGGCTCACCGTGCTCGCCTCCGAAGAG GAAGATGCGCCTGTCACCATGGAGGACCGCGAGCGGATCTATGCGGACAA GCGCGATTCTGACGTGGTGGTGGAGGAGGGCAATAAATACGTCGCCTGCT TCGATCCCTTGGATGGCAGCTCGAACGTTGACGCCTCAATCCCGGTCGGG ACAATCTTTGGCATCTTCGCCAATGGCGATGAGAAGGAGTGTTTGCTCGA TGATGAAGACTTGGAAGGAGGTGCCATGGATCCTGAATCCCGTGCGGCCA AGTGTCTGATGAGCACGCTTCAGCCGGGAACGAATCTAGTGGCGGCAGGC TATTGCCTATACAGTTCCTCGACCCATTTGGTGTTTACCCTCGGGAAAGG CGTGAATGGTTTTACCTACGACACGCACATTGGCGAGTTCGTTTTGACGC ACCCCAATATTCGGATTCCCGAACGAGGGCAGATATACAGCTTTAATGAA GCGAATCGATGGGATTGGGATAAGCCCATGCAGGAATACGTCACCGCCCT CCAAATGGGCCAGGGCGAATCGGGCAAACGCTATTCCTCGCGTTACATCG GTTCCATGGTCGGGGACGTCCACCGCACCCTCCTCTACGGCGGCATTTTT GGATACCCCGCTGACGCGAACAACAAAGACGGGAAACTCCGTCTGCTCTA CGAGGCAGCACCAATGGCCTTCCTGGTCGAGCAAGCAGGAGGTTTGGCAT TGACGGGGAAGAACCGAATCATGGAAATCAGGCCAAGAGGAGTCCATCAG CGGGTGCCGTGTATTTTGGGGTCAAGGGAGGATGTAGAGGAATTGCGAAG TTTTTACAACGCGAGCAAGGACCCGGATCTCATCCGTCGGTGCATTGAGC GTTTGAATTCGGCGTCTTCATAA back to top
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