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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr10 | genome | chr10:609594..613374 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO10G02220.1 vs.
Match: EWM25369.1 (Protein kinase, ATP binding site [Nannochloropsis gaditana]) HSP 1 Score: 637.9 bits (1644), Expect = 2.600e-179 Identity = 358/482 (74.27%), Postives = 391/482 (81.12%), Query Frame = 0
Query: 12 GQDDAKISTSSGSSSSSSSSSSRLHGSSGVGGSQPPANSSVGNNASSLSSTTTSSSTSGGSAATGGGGGGGGEEQTISYSAERIIGHGSFGVVFQATELETREVVAIKKVLQDKRFKNRELQIMKQLVKLPHPNIVLLKQCFYSNGEKPEELYLNLVLEYIPETVYSVARQHQKAKQPVPLLHVKLYVYQLARALAHIHGLGICHRDIKPQNLLLDPATHVLKLCDFGSAKFLVKGEPNVSYICSRYYRAPELIFGSTSYTTSIDIWSEGCVAAELLLGHPLFPGDSGVDQLVEIIKVLGTPTREEIKAMNSNYTEFKFPQIKAHPWNKVFRSRLPQEAIDVVARMLAYAPDRRIRPIESCAHAFFDELRDPATRLADARGLPPLFDFTDTELRTGPPGLVELLVPSHARMVEVPRGRKNGDALPGAAAAGGAAGGAGAGAALATAR-------GGGGEGGGGGAVGGGR---HGHAVQSPV 484
GQ+DAK S+ SS+++RL P ++ GN A++ +TT+S GG GGGG G GEEQTISYSAERIIGHGSFGVVFQATELETREVVAIKKVLQDKRFKNRELQIMKQLVKLPHPNIV+LKQCFYSNGEK EELYLNLVLEYIPETVYSV+RQHQK+KQ VPLLHVKLYVYQLARALAHIHGLGICHRDIKPQNLLLDP THVLKLCDFGSAKFLVKGEPNVSYICSRYYRAPELIFGST+YTT+IDIWSEGCVAAELLLGHPLFPGDSGVDQLVEIIKVLGTPTREEIKAMNSNYTEFKFPQIKAHPWNKVFRSRLP EAIDVVARMLAYAP+RRIRPIESCAHAFFDELRDP TRL+D R LPP+F+FT+TE+R PPGL+ L+P HA V + R+ +A + G +AL++ R GGGGEGG G G R HA+QS +
Sbjct: 96 GQEDAK--------SAPSSTTARLR--------PPELGNTAGNGATASLGSTTAS---GG----GGGGQGQGEEQTISYSAERIIGHGSFGVVFQATELETREVVAIKKVLQDKRFKNRELQIMKQLVKLPHPNIVVLKQCFYSNGEKAEELYLNLVLEYIPETVYSVSRQHQKSKQAVPLLHVKLYVYQLARALAHIHGLGICHRDIKPQNLLLDPTTHVLKLCDFGSAKFLVKGEPNVSYICSRYYRAPELIFGSTAYTTAIDIWSEGCVAAELLLGHPLFPGDSGVDQLVEIIKVLGTPTREEIKAMNSNYTEFKFPQIKAHPWNKVFRSRLPHEAIDVVARMLAYAPERRIRPIESCAHAFFDELRDPNTRLSDGRLLPPIFNFTETEMRAAPPGLLNALMPPHAGGVALSGEREKQEAGACTPSPSVTLGKESLKSALSSGRAVLAARDGGGGEGGKDGGDGSEREEDRAHALQSQI 554
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO10G02220.1 ID=NO10G02220.1|Name=NO10G02220.1|organism=Nannochloropsis oceanica|type=mRNA|length=2934bp TACGGATGCCTCCTCCCGCCGGTGCCAACAGAAACACGAGGCAGAAATAG CCTACAACGATGGTAGTTCTACCCCGGTTCATTTCCTGCCCGCGTGTTCG CTTTCGAAAGTTTAGTTTCGAAACAGCGTGCATGATTTGCACGCAAGCGA CGAAGGAGCGTCATGCTGCTTGAGCAAGGCTCTCTCCTAAGACCTCCCTT GCACTTCTTCCGGTCACAACACAGGCGCTCATTTACACGCCCTCTCCCCC TCCCCTACCTCATCAACACAGGCTAGCCACCAGCAGCCAGAATAACACGG CACCCTGCCGGCATTGCGGCTGTGCGGTGGGTAGCTGCTTGTTGGGAGGA GTGGGGCTCTTGACGTCTAACTAAGCCTAGGAGAACGGGCGAGCGTGAGC TGAAGGCCTGAACGCCAGCTTCAAAAGAGGACGCGTCTATGGGGCTCGCA GTCGTGCCAAGATAAGTCCTTCCTATCCAGATTTCGTGAGAGCAAGCAGC AGCAGCATCAGCAGCAGCACTTGCGTCACGGGTAGATAAGATGCAGGTTG GAGACCCCAAAAACGTCATGGGCGGACAAGACGACGCCAAGATCTCCACC AGCAGCGGCAGCAGCAGCAGCAGTAGCTCCTCCTCCTCACGCTTACATGG CAGCAGTGGAGTGGGAGGCAGCCAACCCCCAGCCAACAGCAGCGTAGGGA ACAATGCCTCCTCTCTCAGTTCCACTACCACCAGCAGCAGCACCAGCGGT GGCAGTGCTGCCACTGGAGGAGGGGGAGGAGGGGGAGGGGAGGAGCAGAC GATTTCTTACTCGGCGGAGAGGATTATAGGACATGGATCGTTCGGGGTAG TCTTTCAGGCGACGGAGTTGGAGACGAGGGAAGTTGTGGCGATCAAGAAG GTGCTCCAAGATAAACGATTCAAGAATCGGGAGTTGCAGATCATGAAGCA GCTGGTGAAGCTGCCGCACCCCAACATAGTCTTGCTCAAGCAATGCTTCT ATTCCAACGGGGAGAAGCCCGAAGAGCTCTACTTGAACCTCGTCTTGGAG TACATCCCCGAGACCGTCTACTCCGTGGCCAGGCAGCACCAGAAGGCCAA GCAGCCGGTGCCCCTCCTCCACGTCAAGCTCTACGTCTACCAGCTCGCCC GAGCCCTGGCACACATCCACGGCCTGGGCATCTGCCACCGGGACATCAAG CCGCAAAACCTCCTTCTCGATCCCGCCACGCATGTCCTGAAGCTTTGCGA TTTTGGAAGCGCCAAATTTCTGGTAAAAGGCGAACCCAACGTCTCATACA TTTGCAGCCGGTACTACCGCGCGCCCGAGCTCATCTTCGGGTCGACGTCG TACACCACATCGATCGATATCTGGAGCGAAGGCTGCGTGGCTGCGGAGCT GCTGTTGGGGCACCCACTGTTTCCGGGGGACAGCGGCGTGGACCAGTTGG TGGAAATCATCAAGGTGCTGGGCACGCCCACAAGGGAGGAGATCAAAGCT ATGAACAGCAATTACACCGAGTTCAAGTTTCCGCAGATCAAGGCACACCC CTGGAACAAGGTTTTCCGCTCCCGCCTCCCGCAAGAGGCCATCGACGTGG TAGCGCGCATGCTGGCCTACGCCCCGGACCGAAGAATACGGCCCATCGAG AGCTGTGCACACGCCTTTTTCGACGAACTCCGAGACCCGGCCACGCGCCT GGCGGATGCCCGTGGCTTGCCTCCTTTGTTTGATTTCACGGACACAGAAC TTCGGACTGGTCCGCCGGGTTTGGTTGAATTGCTCGTTCCTTCCCATGCA CGAATGGTGGAGGTGCCGAGGGGGAGGAAGAACGGGGATGCTCTTCCAGG CGCAGCAGCAGCAGGAGGGGCAGCAGGAGGAGCTGGAGCAGGGGCCGCAC TAGCAACCGCTCGGGGAGGGGGTGGCGAGGGTGGAGGAGGCGGAGCAGTT GGAGGAGGGAGGCATGGGCATGCGGTGCAAAGTCCAGTTGTAGGAGCAAC GGGAGGAGGGGCAACGTGATGGAGGGAAGGAAGGTAGAAGGGAGGGAGGG GAGGCGAAGAGAAGGGGGAGAGGGACCGATACCTCAGACAAGGAGATAAA CGGGGTTTTATATACATAGAGATGAGGTGGGAGAGAGAGAGACTGAAGGG GTGAGGGAGGGGAAGAGCAAGCGACGTCTGTGTGTGTTTGGGGAGGGGAA GGAGGGAGGAGGGAGGGAGAGGGAGAATGGGAGCAAGCAAGCGACGGTCG TGTGTTTGGAGAAAAGGAAGGGAGCGTAAAGGGTGACTCTTTCATGTGTG GTGTTGGTTTTTCTTATTTCGTGTTTTTATTGTTTAGAAAAATTGAGAGG AGGCGAGAGCGCGCACCTGGAGGGTATGGCGAGGAGTGGTGTGCTATTGG CTTGAAGACAAGGGATTGGAGGAAGATTAAAGGGAAGGATAAAGGGGAAT CGATAATGCGGAGGAGGGGGAGAGAAAATGAAGCAGAAGTAGCCGCAGAC AGACGTACATAAGTAACAATCACCGAGATAGGAGAGGAAGGAAAGGCTAT CTCGCGACAGCGGGGAAGTAGAGGGGAACGTTCTAGGCACCGGAAAGAGC GGCAAACACACAGGGTGTTAGAATGCTTTTATGTGAGAGATACTGGTAGG CAAGAGGCTTTTCTGCCCCTCCCCTCTTCTTGCTCTTTCTGCCCATTGCA ATGCAAAGGAAGAACAGGACCAAGATCAGTAGCCGTGGCACCAGCAACGA CGGGATACCGCAGCAGAGGAAGAAAGAGAGAGTGAGAGGGAGAAAAAGAG AAAAAGAAGAAAGTAGAGGAAGAGAGAAGAAAGAGAGAGATTGAAGGGAG GCAGCTTCCCTGAATAAGACATCTCTTCGTGTGTGTTGTGCAGCAGACTT CAGAAGCAAGCAATCAAAAAAGGAATACCTCATA back to topprotein sequence of NO10G02220.1 >NO10G02220.1-protein ID=NO10G02220.1-protein|Name=NO10G02220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=493bp MQVGDPKNVMGGQDDAKISTSSGSSSSSSSSSSRLHGSSGVGGSQPPANS SVGNNASSLSSTTTSSSTSGGSAATGGGGGGGGEEQTISYSAERIIGHGS FGVVFQATELETREVVAIKKVLQDKRFKNRELQIMKQLVKLPHPNIVLLK QCFYSNGEKPEELYLNLVLEYIPETVYSVARQHQKAKQPVPLLHVKLYVY QLARALAHIHGLGICHRDIKPQNLLLDPATHVLKLCDFGSAKFLVKGEPN VSYICSRYYRAPELIFGSTSYTTSIDIWSEGCVAAELLLGHPLFPGDSGV DQLVEIIKVLGTPTREEIKAMNSNYTEFKFPQIKAHPWNKVFRSRLPQEA IDVVARMLAYAPDRRIRPIESCAHAFFDELRDPATRLADARGLPPLFDFT DTELRTGPPGLVELLVPSHARMVEVPRGRKNGDALPGAAAAGGAAGGAGA GAALATARGGGGEGGGGGAVGGGRHGHAVQSPVVGATGGGAT* back to topmRNA from alignment at chr10:609594..613374+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO10G02220.1 ID=NO10G02220.1|Name=NO10G02220.1|organism=Nannochloropsis oceanica|type=mRNA|length=3781bp|location=Sequence derived from alignment at chr10:609594..613374+ (Nannochloropsis oceanica) TACGGATGCCTCCTCCCGCCGGTGCCAACAGAAACACGAGGCAGAAATAG
CCTACAACGATGGTAGTTCTACCCCGGTTCATTTCCTGCCCGCGTGTTCG
CTTTCGAAAGTTTAGTTTCGAAACAGCGTGCATGATTTGCACGCAAGCGA
CGAAGGAGCGTCATGCTGCTTGAGCAAGGCTCTCTCCTAAGACCTCCCTT
GCACTTCTTCCGGTCACAACACAGGCGCTCATTTACACGCCCTCTCCCCC
TCCCCTACCTCATCAACACAGGCTAGCCACCAGCAGCCAGAATAACACGG
CACCCTGCCGGCATTGCGGCTGTGCGGTGGGTAGCTGCTTGTTGGGAGGA
GTGGGGCTCTTGACGTCTAACTAAGCCTAGGAGAACGGGCGAGCGTGAGC
TGAAGGCCTGAACGCCAGCTTCAAAAGAGGACGCGTCTATGGGGCTCGCA
GTCGTGCCAAGATAAGTCCTTCCTATCCAGGTGAGTTCCCGCCCCGCCAA
GTCCTTCCGCATCACTGCCCGTTCCCTTCTCCATCCTCCACACTGTTCTT
CATTCGCAATTTGCTCTCCCAACACACACCCTACATACACAGATTTCGTG
AGAGCAAGCAGCAGCAGCATCAGCAGCAGCACTTGCGTCACGGGTAGATA
AGATGCAGGTTGGAGACCCCAAAAACGTCATGGTGAGTGGGAAGGAAGGA
TGGCGGGGGGGGAAATATGTATAATAGCGTTATGCTCTGCAGTGAAGGCA
GGAGCTCAAGAAGCAGGTAAGTAAAGCCGTGCATGCCGCAGTATTGCCCT
TGATAGCAATGTATTGCTCGCAACGCGCGGACATATCTTCAGAATGTATG
CTGTTGTTGCCGGTGCTGCTGTAGCTGTAGCTGCTGCTACTCCTGCTACT
ACTGCTGCTACTACTGCTGCTGCTTCTCCCCTTCCTCCTTTTCCTCCTCC
TCCGCCCTCCTCTCTTCCTCCTTTTTGCATATGGATTTACCCACTTCTAG
AGATTTATTACATCCTTGACTGTCTCCCCAACACAGGGCGGACAAGACGA
CGCCAAGATCTCCACCAGCAGCGGCAGCAGCAGCAGCAGTAGCTCCTCCT
CCTCACGCTTACATGGCAGCAGTGGAGTGGGAGGCAGCCAACCCCCAGCC
AACAGCAGCGTAGGGAACAATGCCTCCTCTCTCAGTTCCACTACCACCAG
CAGCAGCACCAGCGGTGGCAGTGCTGCCACTGGAGGAGGGGGAGGAGGGG
GAGGGGAGGAGCAGACGATTTCTTACTCGGCGGAGAGGATTATAGGACAT
GGATCGTTCGGGGTAGTCTTTCAGGCGACGGAGTTGGAGACGAGGGAAGT
TGTGGCGATCAAGAAGGTGCTCCAAGATAAACGATTCAAGAATCGGGAGT
TGCAGATCATGAAGCAGCTGGTGAAGCTGCCGCACCCCAACATAGTCTTG
CTCAAGCAATGCTTCTATTCCAACGGGGAGAAGCCCGAAGAGCTCTACTT
GAACCTCGTCTTGGAGTACATCCCCGAGACCGTCTACTCCGTGGCCAGGC
AGCACCAGAAGGCCAAGCAGCCGGTGCCCCTCCTCCACGTCAAGCTCTAC
GTCTACCAGCTCGCCCGAGCCCTGGCACACATCCACGGCCTGGGCATCTG
CCACCGGGACATCAAGCCGCAAAACCTCCTTCTCGATCCCGCCACGCATG
TCCTGAAGCTTTGCGATTTTGGAAGCGCCAAATTTCTGGTAAAAGGTAAG
TTTGCGTCCACCCAGCTGCCCCTCTCTCCCGCCCTTCCTCCCTCCCTCCC
TCGGCAGGGTACAGCTCCAAGCATGACGCCGTCAGAATTCTCGTTTCTTT
CCACCCTCTCTCCTTCCCTTTCCCCCAGACGAATTCCGAGTCTCGGATAT
CTGCAGCCGGTCCTACCGATCGCTCAATCTCACCCCTCACCCCTCCCTTC
CTCCCTCCCTCCCTCCCTCCCCCCCCAGGCGAACCCAACGTCTCATACAT
TTGCAGCCGGTACTACCGCGCGCCCGAGCTCATCTTCGGGTCGACGTCGT
ACACCACATCGATCGATATCTGGAGCGAAGGCTGCGTGGCTGCGGAGCTG
CTGTTGGGGCACCCACTGTTTCCGGGGGACAGCGGCGTGGACCAGTTGGT
GGAAATCATCAAGGTGCTGGGCACGCCCACAAGGGAGGAGATCAAAGCTA
TGAACAGCAATTACACCGAGTTCAAGTTTCCGCAGATCAAGGCACACCCC
TGGAACAAGGTAGAAAGCCCCCCTTCTTCCCTCCCTCCCTCCCTCCCTCT
CTCGCCCTCATGCTGAGAGATTCCGGAATGTCACTAGGGGCTATTTCCTG
AAATCTCGACCTTTCTTTGCCCCCCTCCCTTACTTCCTTTCCCTCTTTCC
CTCCCAGGTTTTCCGCTCCCGCCTCCCGCAAGAGGCCATCGACGTGGTAG
CGCGCATGCTGGCCTACGCCCCGGACCGAAGAATACGGCCCATCGAGAGC
TGTGCACACGCCTTTTTCGACGAACTCCGAGACCCGGCCACGCGCCTGGC
GGATGCCCGTGGCTTGCCTCCTTTGTTTGATTTCACGGACACAGAACTTC
GGACTGGTCCGCCGGGTTTGGTTGAATTGCTCGTTCCTTCCCATGCACGA
ATGGTGGAGGTGCCGAGGGGGAGGAAGAACGGGGATGCTCTTCCAGGCGC
AGCAGCAGCAGGAGGGGCAGCAGGAGGAGCTGGAGCAGGGGCCGCACTAG
CAACCGCTCGGGGAGGGGGTGGCGAGGGTGGAGGAGGCGGAGCAGTTGGA
GGAGGGAGGCATGGGCATGCGGTGCAAAGTCCAGTTGTAGGAGCAACGGG
AGGAGGGGCAACGTGATGGAGGGAAGGAAGGTAGAAGGGAGGGAGGGGAG
GCGAAGAGAAGGGGGAGAGGGACCGATACCTCAGACAAGGAGATAAACGG
GGTTTTATATACATAGAGATGAGGTGGGAGAGAGAGAGACTGAAGGGGTG
AGGGAGGGGAAGAGCAAGCGACGTCTGTGTGTGTTTGGGGAGGGGAAGGA
GGGAGGAGGGAGGGAGAGGGAGAATGGGAGCAAGCAAGCGACGGTCGTGT
GTTTGGAGAAAAGGAAGGGAGCGTAAAGGGTGACTCTTTCATGTGTGGTG
TTGGTTTTTCTTATTTCGTGTTTTTATTGTTTAGAAAAATTGAGAGGAGG
CGAGAGCGCGCACCTGGAGGGTATGGCGAGGAGTGGTGTGCTATTGGCTT
GAAGACAAGGGATTGGAGGAAGATTAAAGGGAAGGATAAAGGGGAATCGA
TAATGCGGAGGAGGGGGAGAGAAAATGAAGCAGAAGTAGCCGCAGACAGA
CGTACATAAGTAACAATCACCGAGATAGGAGAGGAAGGAAAGGCTATCTC
GCGACAGCGGGGAAGTAGAGGGGAACGTTCTAGGCACCGGAAAGAGCGGC
AAACACACAGGGTGTTAGAATGCTTTTATGTGAGAGATACTGGTAGGCAA
GAGGCTTTTCTGCCCCTCCCCTCTTCTTGCTCTTTCTGCCCATTGCAATG
CAAAGGAAGAACAGGACCAAGATCAGTAGCCGTGGCACCAGCAACGACGG
GATACCGCAGCAGAGGAAGAAAGAGAGAGTGAGAGGGAGAAAAAGAGAAA
AAGAAGAAAGTAGAGGAAGAGAGAAGAAAGAGAGAGATTGAAGGGAGGCA
GCTTCCCTGAATAAGACATCTCTTCGTGTGTGTTGTGCAGCAGACTTCAG
AAGCAAGCAATCAAAAAAGGAATACCTCATA back to topCoding sequence (CDS) from alignment at chr10:609594..613374+ >NO10G02220.1 ID=NO10G02220.1|Name=NO10G02220.1|organism=Nannochloropsis oceanica|type=CDS|length=1479bp|location=Sequence derived from alignment at chr10:609594..613374+ (Nannochloropsis oceanica) ATGCAGGTTGGAGACCCCAAAAACGTCATGGGCGGACAAGACGACGCCAA GATCTCCACCAGCAGCGGCAGCAGCAGCAGCAGTAGCTCCTCCTCCTCAC GCTTACATGGCAGCAGTGGAGTGGGAGGCAGCCAACCCCCAGCCAACAGC AGCGTAGGGAACAATGCCTCCTCTCTCAGTTCCACTACCACCAGCAGCAG CACCAGCGGTGGCAGTGCTGCCACTGGAGGAGGGGGAGGAGGGGGAGGGG AGGAGCAGACGATTTCTTACTCGGCGGAGAGGATTATAGGACATGGATCG TTCGGGGTAGTCTTTCAGGCGACGGAGTTGGAGACGAGGGAAGTTGTGGC GATCAAGAAGGTGCTCCAAGATAAACGATTCAAGAATCGGGAGTTGCAGA TCATGAAGCAGCTGGTGAAGCTGCCGCACCCCAACATAGTCTTGCTCAAG CAATGCTTCTATTCCAACGGGGAGAAGCCCGAAGAGCTCTACTTGAACCT CGTCTTGGAGTACATCCCCGAGACCGTCTACTCCGTGGCCAGGCAGCACC AGAAGGCCAAGCAGCCGGTGCCCCTCCTCCACGTCAAGCTCTACGTCTAC CAGCTCGCCCGAGCCCTGGCACACATCCACGGCCTGGGCATCTGCCACCG GGACATCAAGCCGCAAAACCTCCTTCTCGATCCCGCCACGCATGTCCTGA AGCTTTGCGATTTTGGAAGCGCCAAATTTCTGGTAAAAGGCGAACCCAAC GTCTCATACATTTGCAGCCGGTACTACCGCGCGCCCGAGCTCATCTTCGG GTCGACGTCGTACACCACATCGATCGATATCTGGAGCGAAGGCTGCGTGG CTGCGGAGCTGCTGTTGGGGCACCCACTGTTTCCGGGGGACAGCGGCGTG GACCAGTTGGTGGAAATCATCAAGGTGCTGGGCACGCCCACAAGGGAGGA GATCAAAGCTATGAACAGCAATTACACCGAGTTCAAGTTTCCGCAGATCA AGGCACACCCCTGGAACAAGGTTTTCCGCTCCCGCCTCCCGCAAGAGGCC ATCGACGTGGTAGCGCGCATGCTGGCCTACGCCCCGGACCGAAGAATACG GCCCATCGAGAGCTGTGCACACGCCTTTTTCGACGAACTCCGAGACCCGG CCACGCGCCTGGCGGATGCCCGTGGCTTGCCTCCTTTGTTTGATTTCACG GACACAGAACTTCGGACTGGTCCGCCGGGTTTGGTTGAATTGCTCGTTCC TTCCCATGCACGAATGGTGGAGGTGCCGAGGGGGAGGAAGAACGGGGATG CTCTTCCAGGCGCAGCAGCAGCAGGAGGGGCAGCAGGAGGAGCTGGAGCA GGGGCCGCACTAGCAACCGCTCGGGGAGGGGGTGGCGAGGGTGGAGGAGG CGGAGCAGTTGGAGGAGGGAGGCATGGGCATGCGGTGCAAAGTCCAGTTG TAGGAGCAACGGGAGGAGGGGCAACGTGA back to top
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