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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr10 | genome | chr10:605694..609287 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO10G02210.1 vs.
Match: EWM25418.1 (Nonaspanin (TM9SF) [Nannochloropsis gaditana]) HSP 1 Score: 723.8 bits (1867), Expect = 4.400e-205 Identity = 365/426 (85.68%), Postives = 395/426 (92.72%), Query Frame = 0
Query: 175 QIVSANVTTLYQRKVDILSPEVKEVEFSYSVDWIEEPESTWADRMLRYADSRFIPSTFEIHWLSIINSFVLVLLLTAFLAVILMRVLKNDFSRYMEMDEDDMVEEESGWKLIHGDVFRFPSNINLFSAVIGSGLQLCVTTFLLLICALSGVFRATKRGSILTSLLLIYVLTSFINGYVSARLYKQLGGKNWTWNIVTAALVFPGPLAVVWSFLNSVAWSQASTAALPAATIFIILGLFMFVSIPLSVVGGIAGRNTGGDFEAPCRTKKVAREIPQDGPSFRHPVAQMFLAGFLPFSAIYIELHYIFNSIWGHKIYTLFGILFLAFIMLFIVTCFITIASIYFQLTREDHQWWWRSFFNGGATGLFIWMYSFFYYFQRSEMDGFFQASYFFGYMAITSYAFFIMLGSLGFCSSLVFVKHIYSVIKTD 601
QIVS NVTTL QRKV+IL P +KEVEFSYSVDWIEEP+ WADRMLRYADSRFIPSTFEIHWLSIINSFVLVLLLT FL +ILMRVLKND SRYME+D D+++EEESGWKLIHGDVFRFPS+INL +A+IGSG+QLC TT LLLICALSGVFRATKRGSILT+LLLIYVLTSFI GY+SARLY+Q+GGKNWTWNI+TAALVFPGPLA+VWSFLNS+AWS ASTAALPAAT+FIILGLF+FVS PLSVVGGIAGRN+ GDF+APCRTKKVAREIP+DGP F+HPV Q LAGFLPFSAIYIELHYIFNSIWGHKIYTLFGIL LAFIMLF+VT ITIA IYFQLTREDH+WWWR+F NGGATGLFI YSFFYYFQRSEMDGFFQASYFFGYMAI SYAFFIMLGS+GF SSL FV+HIYSVIKTD
Sbjct: 47 QIVSVNVTTLNQRKVEILDPNLKEVEFSYSVDWIEEPQLAWADRMLRYADSRFIPSTFEIHWLSIINSFVLVLLLTIFLTIILMRVLKNDVSRYMEIDNDEILEEESGWKLIHGDVFRFPSHINLLAALIGSGVQLCATTALLLICALSGVFRATKRGSILTALLLIYVLTSFITGYISARLYRQMGGKNWTWNIITAALVFPGPLALVWSFLNSLAWSNASTAALPAATVFIILGLFIFVSFPLSVVGGIAGRNSAGDFDAPCRTKKVAREIPKDGPCFQHPVVQALLAGFLPFSAIYIELHYIFNSIWGHKIYTLFGILVLAFIMLFMVTSLITIALIYFQLTREDHRWWWRTFLNGGATGLFILAYSFFYYFQRSEMDGFFQASYFFGYMAIVSYAFFIMLGSVGFLSSLSFVRHIYSVIKTD 472
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO10G02210.1 ID=NO10G02210.1|Name=NO10G02210.1|organism=Nannochloropsis oceanica|type=mRNA|length=2398bp ACAGGCATCCATGAAGCTGTGCCAAGCAAGCCACGGGATGGCTGTCCTGG GCGTTCTGGCAATCCTACCCGTGTTTTCATCAGCGGCGGATGGAAGAAAA TTCCAAAGCCATGACCGTGTTCCCGTGATTGTCAACAAGGTAGGGCCTTT TAACAACCCTTCCGAGACGTACCAATACTACTCTTTGCCGTATTGCAAGG AGGGGACGGGAGGGGTCTCAAAGCGGCAACGCCACGGGCTGGGAGAGCTT CTGGTGGGGGACAGGAAGGTGGTCTCCCCTTACGAGATCAACTTTTTGGA TAGTTTCACATGGCGTTCGCTGTGCAAGGTGGAGCTGACGGAGGAAGATA AACGGACGTTTGCGGATGCGATCGAGGATGAGTACTACTTCGAGATGTTC ATCGACGACCTCCCCATGTACGGCTACGTCGGCGAGCCGGAAGGCCAAGC CCCCATTCTGGGGCACACCTTTGAGGGGTCGCATACTTTCCTCTACCCTC ATCTTCATTTCGCGATTGGGTACAAGGAGGACCAGATCGTGAGTGCGAAT GTCACGACGCTTTATCAACGGAAGGTTGATATTCTCAGTCCGGAAGTGAA GGAGGTGGAGTTCTCCTACTCAGTAGATTGGATCGAGGAGCCCGAATCGA CGTGGGCGGATCGGATGTTGAGGTATGCGGACTCGCGGTTCATCCCGAGC ACGTTTGAGATCCACTGGCTCTCCATCATCAATTCATTCGTCCTCGTCCT CCTACTCACGGCTTTTCTTGCCGTCATACTGATGCGGGTGCTCAAGAACG ACTTCAGCCGTTATATGGAGATGGACGAGGATGACATGGTGGAGGAGGAG AGTGGATGGAAGCTCATTCACGGGGACGTGTTCCGCTTCCCTTCTAACAT CAATCTCTTCTCTGCGGTGATAGGCAGCGGCCTGCAGCTGTGCGTTACCA CCTTCCTCCTTCTCATCTGCGCCTTGTCGGGCGTCTTCCGCGCCACCAAG CGCGGGTCCATCCTGACCTCCTTACTCCTGATCTACGTGCTTACCTCCTT CATCAACGGTTATGTCTCCGCGCGTCTCTACAAGCAACTGGGCGGGAAAA ACTGGACGTGGAACATCGTCACTGCTGCTCTTGTCTTCCCGGGGCCCCTG GCCGTGGTGTGGTCGTTTCTAAATTCAGTGGCTTGGAGCCAGGCATCGAC GGCGGCTCTACCGGCGGCCACGATTTTCATTATTCTGGGCTTGTTTATGT TTGTCTCCATACCTCTAAGTGTGGTGGGGGGCATTGCGGGGAGGAACACG GGGGGAGACTTTGAGGCGCCGTGTCGGACGAAGAAGGTGGCGAGGGAGAT CCCGCAGGATGGTCCCTCCTTCCGGCACCCAGTGGCCCAGATGTTCCTCG CGGGCTTCCTGCCCTTCTCCGCCATCTACATCGAGCTTCATTATATTTTT AACTCCATTTGGGGTCACAAGATTTACACCTTGTTCGGTATTCTCTTCTT GGCCTTCATCATGCTCTTTATCGTGACGTGCTTTATCACAATTGCCTCTA TTTATTTCCAGCTGACTCGGGAGGATCACCAGTGGTGGTGGCGTTCCTTC TTTAATGGAGGAGCGACGGGGTTATTTATTTGGATGTACTCCTTCTTTTA CTATTTCCAACGCTCGGAGATGGATGGCTTCTTCCAGGCGAGTTATTTCT TCGGGTATATGGCGATCACGTCATATGCGTTTTTTATCATGTTGGGGAGT TTGGGCTTTTGCTCGAGCTTGGTTTTCGTGAAGCACATTTATTCGGTGAT CAAGACGGATTAGGGGGCGAGGTAATAAAGGAAAGATGGGGAAGGGGAAT CTCTAAATCTTTACATAGCGTGATTGGGATACTCGCAGCAAGTGCTTGAG GGTGTAGCTGTGATTTGGGATGAGGGTTGGATGGGTTGGAGGAATTGCTA TCGGCGGTGACTGAATTGTGTTCGGGCGTAGGAGGACGGTAAGCGAAATT TGGAAATAAATAATTTTCTCTTGTGGAACCTGGCTTAAAATGGAATCGCA TGACAGTGCGGTGAAACAAGACCATCGCTGAGTAGGAGGCAAGCAAGCTG GAAAAAGGACGAAGCGGATGAGTGGAAAGCCGAACTCGTACTATTATTAT GGAACAGAGGAGAAAGGAAAAAACAAAAATGTGTGATGACGTGAGAGTGC GTTGGACATGCTTATCCTCGCGACGCGACACAGCGTTGCCTGTAAGGCGT GTGCGCCCCAACACGTGCATGCTCCAAGGTCGATTTGCGCTCCCTAGGGC CTGAATGTGCAAGCACTGTGAGTTAATAACCAATACACGGAGTACTCGTT GGATGTATTTTCAAATGCACTGAGGCAATCTTTTCTACCCAAACATTT back to topprotein sequence of NO10G02210.1 >NO10G02210.1-protein ID=NO10G02210.1-protein|Name=NO10G02210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=601bp MKLCQASHGMAVLGVLAILPVFSSAADGRKFQSHDRVPVIVNKVGPFNNP SETYQYYSLPYCKEGTGGVSKRQRHGLGELLVGDRKVVSPYEINFLDSFT WRSLCKVELTEEDKRTFADAIEDEYYFEMFIDDLPMYGYVGEPEGQAPIL GHTFEGSHTFLYPHLHFAIGYKEDQIVSANVTTLYQRKVDILSPEVKEVE FSYSVDWIEEPESTWADRMLRYADSRFIPSTFEIHWLSIINSFVLVLLLT AFLAVILMRVLKNDFSRYMEMDEDDMVEEESGWKLIHGDVFRFPSNINLF SAVIGSGLQLCVTTFLLLICALSGVFRATKRGSILTSLLLIYVLTSFING YVSARLYKQLGGKNWTWNIVTAALVFPGPLAVVWSFLNSVAWSQASTAAL PAATIFIILGLFMFVSIPLSVVGGIAGRNTGGDFEAPCRTKKVAREIPQD GPSFRHPVAQMFLAGFLPFSAIYIELHYIFNSIWGHKIYTLFGILFLAFI MLFIVTCFITIASIYFQLTREDHQWWWRSFFNGGATGLFIWMYSFFYYFQ RSEMDGFFQASYFFGYMAITSYAFFIMLGSLGFCSSLVFVKHIYSVIKTD * back to topmRNA from alignment at chr10:605694..609287- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO10G02210.1 ID=NO10G02210.1|Name=NO10G02210.1|organism=Nannochloropsis oceanica|type=mRNA|length=3594bp|location=Sequence derived from alignment at chr10:605694..609287- (Nannochloropsis oceanica) ACAGGCATCCATGAAGCTGTGCCAAGCAAGCCACGGGATGGCTGTCCTGG
GCGTTCTGGCAATCCTACCCGTGTTTTCATCAGGTACGTCCTCAAGCAAC
GTGACCCGCCCGGAAAGGGGGGGGAGCGGGTTGTATGTAATGCGGCTGAG
GGGGATGGGATAGCGCGGGGATGTTGGTGGAGGACGGATGTGTGTGCGGG
CATTGGTAAATGTGTTTCTCAAAGCATGTGTACGTGCGTGGTTGAACATA
TCTATAGTTTGCGTCCCACCTGCGCCTCGCTCCGCTGGCTTCCCCCGGAC
TCACTCCATCCGTCATTTTTCCCTCATCCCCCTATCCATCCCTCAACTGC
AGCGGCGGATGGAAGAAAATTCCAAAGCCATGACCGTGTTCCCGTGATTG
TCAACAAGGTAGGGCCTTTTAACAACCCTTCCGAGACGTACCAATACTAC
TCTTTGCCGTATTGCAAGGAGGGGACGGGAGGGGTCTCAAAGCGGCAACG
CCACGGGCTGGGAGAGCTTCTGGTGGGGGACAGGAAGGTGGTCTCCCCTT
ACGAGATCAACTTTTTGGATAGTTTCACATGGCGTTCGCTGTGCAAGGTG
GAGCTGACGGAGGAAGATGTACGTGTTGTGGGCGGGACGGAAAGAGATAG
GGACCAGTATGGAAGGTTGGGATGGGAAGGGAGGAACAGCTGAGACCCGA
AGCCGCGTGTGAATCATGAAGACTCACCTTAATTCAACTTTTCCGTTGTT
GACCGATTGGACAGAAACGGACGTTTGCGGATGCGATCGAGGATGAGTAC
TACTTCGAGATGTTCATCGACGACCTCCCCATGTACGGCTACGTCGGCGA
GGTAAGTGCAGGGACGTCAATTGTTTTGCATGTTTATCCAACCCTATCTG
CGTCAAGGAAACAAAGACAGGAGATGGATGAAATTCTCGTCTTCTATGAG
TTCACTTTGGCTGCGGGATGGCGGTGATGATATGTATATACATGATAATG
TTTGAATTTCAAATGCTAAAAAAAAAACTCCCTCCCTCCCTTCTTTCCTC
CCTCCCTCCCTCCAAAAAGCCGGAAGGCCAAGCCCCCATTCTGGGGCACA
CCTTTGAGGGGTCGCATACTTTCCTCTACCCTCATCTTCATTTCGCGATT
GGGTACAAGGAGGACCAGATCGTGAGTGCGAATGTCACGACGCTTTATCA
ACGGAAGGTTGATATTCTCAGTCCGGAAGTGAAGGAGGTGGAGTTCTCCT
ACTCAGTAGATTGGATCGAGGAGCCCGAATCGACGTGGGCGGATCGGATG
TTGAGGTATGCGGACTCGCGGTTCATCCCGAGCACGTTTGAGGTGCGTGT
TGAGGAGATGGGATGGAGGAAGGGTGGGAAGGAGGCAGGGAAAGGAAAAC
GGGGAAGAGGTAGCCACCCATGGTTTTTCTTGTCCTTGTTTTCTTGAGGG
ATGGGAAGGAGGGAGGCGCAGCAGTTACGGTTTATCCCTCCATTGGTAGA
TATTTTTCCTGTCTGCGGCTCGGCGAGACCCTAGCCGTGAGTTGCCGTTC
TCTCTCTTTGGAGTCCGTCCCTCCCTTCGCATTTATTTCTCCCTCCGCTG
TTTCACTTGTTACTTACCGAATCCCCTCCTTTTCTCCCACCCCTTTTCCC
CTCCCTCCAGATCCACTGGCTCTCCATCATCAATTCATTCGTCCTCGTCC
TCCTACTCACGGCTTTTCTTGCCGTCATACTGATGCGGGTGCTCAAGAAC
GACTTCAGCCGTTATATGGAGATGGACGAGGATGACATGGTGGAGGAGGA
GAGTGGATGGAAGCTCATTCACGGGGACGTGTTCCGCTTCCCTTCTAACA
TCAATCTCTTCTCTGCGGTGATAGGCAGCGGCCTGCAGGTACGATTCGGT
TGGGAAGGGAAATGTATGGGGCGTATGTGTATCTACCTATCTACCTACCT
ATGTTCCTATTTTTTCACCCACCAACATTAGCTGTGCGTTACCACCTTCC
TCCTTCTCATCTGCGCCTTGTCGGGCGTCTTCCGCGCCACCAAGCGCGGG
TCCATCCTGACCTCCTTACTCCTGATCTACGTGCTTACCTCCTTCATCAA
CGGTTATGTCTCCGCGCGTCTCTACAAGCAACTGGGCGGGAAAAACTGGA
CGTGGAACATCGTCACTGCTGCTCTTGTCTTCCCGGGGCCCCTGGCCGTG
GTGTGGTCGTTTCTAAATTCAGTGGCTTGGAGCCAGGCATCGACGGCGGC
TCTACCGGCGGCCACGATTTTCATTATTCTGGGCTTGTTTATGTTTGTCT
CCATACCTCTAAGTGTGGTGGGGGGCATTGCGGGGAGGAACACGGGGGGA
GACTTTGAGGCGCCGTGTCGGACGAAGAAGGTGGCGAGGGAGGTGAGCAA
TGAGAGAAAATACTGTGGGAGGGAGGGAGGATGCCAGACTTGCAACCACT
TCTGGCCAAGCTGCCTCACGCTCTCCGCATTTTTCTAACACTCATCCTCT
TTTTCTCCCTCCCTCCTTTCCTTGTTCCCTTTCCCCTCTCACAGATCCCG
CAGGATGGTCCCTCCTTCCGGCACCCAGTGGCCCAGATGTTCCTCGCGGG
CTTCCTGCCCTTCTCCGCCATCTACATCGAGCTTCATTATATTTTTAACT
CCATTTGGGGTCACAAGATTTACACCTTGTTCGGTATTCTCTTCTTGGCC
TTCATCATGCTCTTTATCGTGACGTGCTTTATCACAATTGCCTCTATTTA
TTTCCAGCTGACTCGGGAGGATCACCAGTGGTGGTGGCGTTCCTTCTTTA
ATGGAGGAGCGACGGGGTTATTTATTTGGATGTACTCCTTCTTTTACTAT
TTCCAACGCTCGGAGATGGATGGCTTCTTCCAGGCGAGTTATTTCTTCGG
GTATATGGCGATCACGTCATATGCGTTTTTTATCATGTTGGGGAGTTTGG
GCTTTTGCTCGAGCTTGGTTTTCGTGAAGCACATTTATTCGGTGATCAAG
ACGGATTAGGGGGCGAGGTAATAAAGGAAAGATGGGGAAGGGGAATCTCT
AAATCTTTACATAGCGTGATTGGGATACTCGCAGCAAGTGCTTGAGGGTG
TAGCTGTGATTTGGGATGAGGGTTGGATGGGTTGGAGGAATTGCTATCGG
CGGTGACTGAATTGTGTTCGGGCGTAGGAGGACGGTAAGCGAAATTTGGA
AATAAATAATTTTCTCTTGTGGAACCTGGCTTAAAATGGAATCGCATGAC
AGTGCGGTGAAACAAGACCATCGCTGAGTAGGAGGCAAGCAAGCTGGAAA
AAGGACGAAGCGGATGAGTGGAAAGCCGAACTCGTACTATTATTATGGAA
CAGAGGAGAAAGGAAAAAACAAAAATGTGTGATGACGTGAGAGTGCGTTG
GACATGCTTATCCTCGCGACGCGACACAGCGTTGCCTGTAAGGCGTGTGC
GCCCCAACACGTGCATGCTCCAAGGTCGATTTGCGCTCCCTAGGGCCTGA
ATGTGCAAGCACTGTGAGTTAATAACCAATACACGGAGTACTCGTTGGAT
GTATTTTCAAATGCACTGAGGCAATCTTTTCTACCCAAACATTT back to topCoding sequence (CDS) from alignment at chr10:605694..609287- >NO10G02210.1 ID=NO10G02210.1|Name=NO10G02210.1|organism=Nannochloropsis oceanica|type=CDS|length=1803bp|location=Sequence derived from alignment at chr10:605694..609287- (Nannochloropsis oceanica) ATGAAGCTGTGCCAAGCAAGCCACGGGATGGCTGTCCTGGGCGTTCTGGC AATCCTACCCGTGTTTTCATCAGCGGCGGATGGAAGAAAATTCCAAAGCC ATGACCGTGTTCCCGTGATTGTCAACAAGGTAGGGCCTTTTAACAACCCT TCCGAGACGTACCAATACTACTCTTTGCCGTATTGCAAGGAGGGGACGGG AGGGGTCTCAAAGCGGCAACGCCACGGGCTGGGAGAGCTTCTGGTGGGGG ACAGGAAGGTGGTCTCCCCTTACGAGATCAACTTTTTGGATAGTTTCACA TGGCGTTCGCTGTGCAAGGTGGAGCTGACGGAGGAAGATAAACGGACGTT TGCGGATGCGATCGAGGATGAGTACTACTTCGAGATGTTCATCGACGACC TCCCCATGTACGGCTACGTCGGCGAGCCGGAAGGCCAAGCCCCCATTCTG GGGCACACCTTTGAGGGGTCGCATACTTTCCTCTACCCTCATCTTCATTT CGCGATTGGGTACAAGGAGGACCAGATCGTGAGTGCGAATGTCACGACGC TTTATCAACGGAAGGTTGATATTCTCAGTCCGGAAGTGAAGGAGGTGGAG TTCTCCTACTCAGTAGATTGGATCGAGGAGCCCGAATCGACGTGGGCGGA TCGGATGTTGAGGTATGCGGACTCGCGGTTCATCCCGAGCACGTTTGAGA TCCACTGGCTCTCCATCATCAATTCATTCGTCCTCGTCCTCCTACTCACG GCTTTTCTTGCCGTCATACTGATGCGGGTGCTCAAGAACGACTTCAGCCG TTATATGGAGATGGACGAGGATGACATGGTGGAGGAGGAGAGTGGATGGA AGCTCATTCACGGGGACGTGTTCCGCTTCCCTTCTAACATCAATCTCTTC TCTGCGGTGATAGGCAGCGGCCTGCAGCTGTGCGTTACCACCTTCCTCCT TCTCATCTGCGCCTTGTCGGGCGTCTTCCGCGCCACCAAGCGCGGGTCCA TCCTGACCTCCTTACTCCTGATCTACGTGCTTACCTCCTTCATCAACGGT TATGTCTCCGCGCGTCTCTACAAGCAACTGGGCGGGAAAAACTGGACGTG GAACATCGTCACTGCTGCTCTTGTCTTCCCGGGGCCCCTGGCCGTGGTGT GGTCGTTTCTAAATTCAGTGGCTTGGAGCCAGGCATCGACGGCGGCTCTA CCGGCGGCCACGATTTTCATTATTCTGGGCTTGTTTATGTTTGTCTCCAT ACCTCTAAGTGTGGTGGGGGGCATTGCGGGGAGGAACACGGGGGGAGACT TTGAGGCGCCGTGTCGGACGAAGAAGGTGGCGAGGGAGATCCCGCAGGAT GGTCCCTCCTTCCGGCACCCAGTGGCCCAGATGTTCCTCGCGGGCTTCCT GCCCTTCTCCGCCATCTACATCGAGCTTCATTATATTTTTAACTCCATTT GGGGTCACAAGATTTACACCTTGTTCGGTATTCTCTTCTTGGCCTTCATC ATGCTCTTTATCGTGACGTGCTTTATCACAATTGCCTCTATTTATTTCCA GCTGACTCGGGAGGATCACCAGTGGTGGTGGCGTTCCTTCTTTAATGGAG GAGCGACGGGGTTATTTATTTGGATGTACTCCTTCTTTTACTATTTCCAA CGCTCGGAGATGGATGGCTTCTTCCAGGCGAGTTATTTCTTCGGGTATAT GGCGATCACGTCATATGCGTTTTTTATCATGTTGGGGAGTTTGGGCTTTT GCTCGAGCTTGGTTTTCGTGAAGCACATTTATTCGGTGATCAAGACGGAT TAG back to top
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