NO10G01810.1, NO10G01810.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G01810.1
Unique NameNO10G01810.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length396
Alignment locationchr10:505017..506309 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:505017..506309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G01810.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G01810NO10G01810Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G01810.1NO10G01810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G01810.1.cds1NO10G01810.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G01810.1.cds2NO10G01810.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G01810.1.cds3NO10G01810.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G01810.1.cds4NO10G01810.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G01810.1 ID=NO10G01810.1|Name=NO10G01810.1|organism=Nannochloropsis oceanica|type=mRNA|length=396bp
ATGAGATGGCGAGTTGCCACAGAGACTCCTCCATGGCTCGAGAAATTACG
TGGGCGCAGCTACGGCACACATGCACGATTAGCAACGCACATGGAGAAAA
ATACAATGCACAAGACTCTATGCAGTCTTTTTGACGTCGTCCCGTGCATC
GCCATGCATGTTGTGGACCTGGGCGGGGGCATGAATGGTGGTGAAGACGA
CGAGAACGAGAATGGTGCTCAAGACGACGAGAACGAGAATGATGCTCAGC
AGTTGAATGCCCAGGCAACCGACGAGGCCCGAGAGAATGAAGCACCGACC
CCTTCTGATCTCCCAGAAGTCGTCCTCCGTCTTATACCTACCTCCTGGAA
AAGACGCCGAAACCCGTCAGTACAACCTCCCCACTGGTCGCTCTGA
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protein sequence of NO10G01810.1

>NO10G01810.1-protein ID=NO10G01810.1-protein|Name=NO10G01810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=132bp
MRWRVATETPPWLEKLRGRSYGTHARLATHMEKNTMHKTLCSLFDVVPCI
AMHVVDLGGGMNGGEDDENENGAQDDENENDAQQLNAQATDEARENEAPT
PSDLPEVVLRLIPTSWKRRRNPSVQPPHWSL*
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mRNA from alignment at chr10:505017..506309+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G01810.1 ID=NO10G01810.1|Name=NO10G01810.1|organism=Nannochloropsis oceanica|type=mRNA|length=1293bp|location=Sequence derived from alignment at chr10:505017..506309+ (Nannochloropsis oceanica)
ATGAGATGGCGAGGTAGGGCTTGCTTGGGTTAGAGTTGGTGGGTCGCGCG
CGCCAAAAAGTAGGACTTGGATTGTATAAGATTGCCACCACCTAGGTGAA
GATTGTGGCCATGGGTGAGAGGTAATTTTAAGTGGTGTTGGCCATAATAA
TTCAAGAGGAAACTTGAAATACGCCCCGCACGTGATGACGCCGCCTCTGC
TGCTGCCAAATCCACCTCAAACCACCCTCTTTAGAGCACGCAGGAGCAAA
GCAATGAGCCCAACCAGATAGACGTGTGCATATCATGCCTATGCCAATGC
CAATGCCAAATCATCATAGACCAGAAACGCTTTTTCGATTGCTAAAGCCA
CCCCTCTCACTCATAAATACCATAGTTGCCACAGAGACTCCTCCATGGCT
CGAGAAATTACGTGGGCGCAGCTACGGCAGTAAGTTTGGAGGGAACCTCG
GTTGGGGGAGGGTGACAGGAGGCCGAGATCAATGCCATTTATTGCATTTA
TTCGGCAACAACTTTGTTGATTTTCTAAACTAAATAGTCGCTTATTGTCT
GTCTGTCGCGCACTTAAAACAATGGTTTTCCTCGTTCTCCTCTTCCCACA
AACCACCAAAGCACATGCACGATTAGCAACGCACATGGAGAAAAATACAA
TGCACAAGACTCTATGCAGTCTTTTTGACGTCGTCCCGTGGTTTGTGTGG
CTTTGAGCTTCCCGTGCATCAAATTGGAGTGTTCCGCGGCCTGCGGGTCC
ACAAATCATCACTCTCCCTCCAACTCCCCTCGAGTCAACTTCCTCTGCCC
TCAACCCCTCACAAATGAAAAAAGCGTCATAAGGGCGCACACGTATTTGC
TGATTATGCGCTGAGTAACATTGCTCCCTTCTTTGCCCTTATATATATAT
ATGGGCATTGGCCATGGGCCTTCAAACCCTTCAAACCAAAGGGATGGGTC
CCCTTGTTCAAACACACAACCTTGCACCATGCTACTCCTCTCCCCCTCCT
CCCATGCTATCTCAAGTGGGATACACCCTCGCTCACCGCACAGCATCGCC
ATGCATGTTGTGGACCTGGGCGGGGGCATGAATGGTGGTGAAGACGACGA
GAACGAGAATGGTGCTCAAGACGACGAGAACGAGAATGATGCTCAGCAGT
TGAATGCCCAGGCAACCGACGAGGCCCGAGAGAATGAAGCACCGACCCCT
TCTGATCTCCCAGAAGTCGTCCTCCGTCTTATACCTACCTCCTGGAAAAG
ACGCCGAAACCCGTCAGTACAACCTCCCCACTGGTCGCTCTGA
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Coding sequence (CDS) from alignment at chr10:505017..506309+

>NO10G01810.1 ID=NO10G01810.1|Name=NO10G01810.1|organism=Nannochloropsis oceanica|type=CDS|length=396bp|location=Sequence derived from alignment at chr10:505017..506309+ (Nannochloropsis oceanica)
ATGAGATGGCGAGTTGCCACAGAGACTCCTCCATGGCTCGAGAAATTACG
TGGGCGCAGCTACGGCACACATGCACGATTAGCAACGCACATGGAGAAAA
ATACAATGCACAAGACTCTATGCAGTCTTTTTGACGTCGTCCCGTGCATC
GCCATGCATGTTGTGGACCTGGGCGGGGGCATGAATGGTGGTGAAGACGA
CGAGAACGAGAATGGTGCTCAAGACGACGAGAACGAGAATGATGCTCAGC
AGTTGAATGCCCAGGCAACCGACGAGGCCCGAGAGAATGAAGCACCGACC
CCTTCTGATCTCCCAGAAGTCGTCCTCCGTCTTATACCTACCTCCTGGAA
AAGACGCCGAAACCCGTCAGTACAACCTCCCCACTGGTCGCTCTGA
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Synonyms
Publications