NO10G01390.1, NO10G01390.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G01390.1
Unique Name	NO10G01390.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4565
Alignment location	chr10:405111..409828 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:405111..409828 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G01390.1 vs.
Match: EWM25432.1 (hypothetical protein Naga_100005g113 [Nannochloropsis gaditana])

HSP 1 Score: 344.7 bits (883), Expect = 6.700e-91
Identity = 201/422 (47.63%), Postives = 267/422 (63.27%), Query Frame = 0

Query:  201 CDLATRHQLFDNQEESITPSELVACLKAPESMDGTEPDPESFRAILFDFVTTKPEAFSLQDLATLIQA--SSTSLNQQSAILPSLLDLLLDTTTLRMRAN--PPNSLLP-TTWVHLALASNFLPPILKARPASHRFLQQLTTNLSSRLSALSPSDLVLAIRVWPREPADLDDFSCKLIQAILLQSINSLHAFDPPELTQLIQGLRRPMTPTRLSILEALDETGQETPDLNSRQRLFKAAIKTIARRHIHQLSPRELSVFIQACVTDLSFADWSKDLGVAFPRTYTTAALKHIPHMAPLQILPTLSAFLFLRSVFDFSPGSEIYHGLAKMAIEKVEEGGKEEGEEDPSVLLSLLQTFAFFASPEYDPGEVLEVLTRKVLRHLHSFSPFSLRCLVETLALPSHSYVPSFGMLTEISHHAANQLL 618
            C    RH    +   S  P+ L A L+A    +      E+F++I    VTT+  A  +QDLA ++    SSTS   +  I PSL DLLL+T T R+RAN  P +  LP +TWV L  AS+ L P +KAR A  +F Q L  +L  RLS+L+P+DL LA+++WPR PA LD FS +LIQAIL QSI+SLH F P EL QL++GLRRPMT  R + +EALD    ETPD+N+RQRL KAA K +ARR + +L P +LS F+Q CVTDL+F DW++DLGVAFPR YT A  KHIP M PLQ+LP LSAFLFL +VF FS G++ Y  L  + +   E+ G++    D   L+  + TFA  A P++DP  V+ +L+ + L+ +      + R L+E LALP+HSY+P+   L  I  HA   LL
Sbjct:  229 CQNRQRHIDIQSTLISPDPNGLFAQLRA-SWRNSESHGVENFQSI----VTTRLNALQMQDLAQIVHKTLSSTSSLSRQRIPPSLTDLLLETITARVRANSSPSSPSLPGSTWVRLLQASSSLSPAVKARLAGQQFRQALVLDLPHRLSSLAPADLALAVQIWPRPPAHLDAFSRRLIQAILAQSIDSLHRFKPLELVQLLRGLRRPMTRDRRTTIEALDAARLETPDVNNRQRLIKAATKQLARR-VEELGPDDLSAFMQMCVTDLTFEDWARDLGVAFPRAYTRAVFKHIPAMRPLQLLPVLSAFLFLHTVFHFSAGTDYYRRLENLVLASFEKNGRDVNHSD---LVLFVHTFAMLAGPDHDPATVIAMLSSRTLQRVSHLQSGAFRRLMEALALPTHSYIPTNAQLAVILKHAVRHLL 641

The following BLAST results are available for this feature:

BLAST of NO10G01390.1 vs.

BLAST of NO10G01390.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25432.1	6.700e-91	47.63	hypothetical protein Naga_100005g113 [Nannochlorop...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G01390	NO10G01390	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G01390.1	NO10G01390.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G01390.1.cds1	NO10G01390.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G01390.1.cds2	NO10G01390.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:405111..409828-
coding sequence from alignment at chr10:405111..409828-

mRNA sequence

>NO10G01390.1 ID=NO10G01390.1|Name=NO10G01390.1|organism=Nannochloropsis oceanica|type=mRNA|length=4565bp
CCCCCCCTCCGTTCCCTCCTTCATACCCACCCATTCACCGCGCCGCGCCA
CACACCACACACCCACAGCTGATTCCCCCGCGCGTCAGCCTGGAGGAGAA
CGACAGTATCGTGGCCACACCAAAGGGACAATAAATAAAGTCAAAATACG
CTCCCATTCTTGCCGTCTTTTACCAGGACCAAGGAGGAAGATTTAAATGT
CGGGCACTTGGATCGATCGTCTTCATCGTCTGCACGTCAATTTTCTCGCT
TCGTAATCTGCACGTCATTCCCACCATTCATGCCTGAAAGGGTAATATAA
GAAAACCAAATCTTCGTAAACGCGTACCCTGGATAGTAACGGAATTCTTG
CGGTCAAAATATCCTCGCTCCTTTTTGCAAGCGCTGTACTAAAAGGATGT
TACGCTTGTTCCTGTTGCCATACACATGAATTGTCACTTGATAAAATTGC
GTCCAAGCGAATGGATCTCCAGGTATCTTGGGTACCCTTGTAAAAAACAA
AAGCGCACGAGAAGCACTCTCAATCCCGCACGGGTGCTTTTGAAGCCCTC
GTGTCCTTTGGAAGTAAATGGGCTTTGAAACAATATAGACCAAATATGCC
ACTGGTTGGTTATACTGTGGTAACTCTTCTGCTATTTATTTCCGTTCGCA
AGCACATAGTCATTCCGGGCCAAGATAATCAACCGTGGGCAAGGGCTTGA
ACATTTTTCATGGCCCTCCCTATGGTCACACCCCGTTATCCGATTTTTCA
TTTCCATTCCTACACTCCATGTCATCCCCACTCAAAGCCCCCAAATGTGA
CAACAAGTATGTCGGCAACCCCCTCCCCTTCCCTTGGCCCCCTTCCTCCT
CTTCCACCACCAAAGCCTCGACCGTGCTCGTGCAACCCGTCCCCACCAAC
ACAGTATCGCAACCTCCTACAACTCCCAGCTGTATATCCGTATCTAAGCG
ATCGCCCACGACCACCGTCCGCCTCGGGTCTAGCCCATGCATTGTCATCA
ATCGGTCCACCAGCCATTTCGAGGGTTTTCCAACAGTCACAGCCATGCGA
TTCACGCTCTGTTCCACCGCAGCGACCGCGCATCCATTCCCAGGCACATT
TCGGTCGGCTAATTTATCAAATGCATCTTTATTGGTGGCCACGAATGCTG
CCCCCGGGTTTTTTTGGAGGTGCAAGCTTGCCAAGCACAGCTTCGCATAA
TTGAATGTCAGATCCCAGCCACACACCACGGCACCCACATCAGGGTCAGC
GTCAATAGCTAGAAAATCGGCTTCTGTTGCATATATTCGTGTGGCGTACT
CTTTGTCCGCACCGCAAATGGAATCAATCCCTACCAACGCCAGCTCGTCC
ACCAAGCCTTGGCAGCCAATTACGAATGCTTTTTTCACATCGGGACGCTC
CACGCGCAAATACTCGGCCGCCGCCCAAGATGAAGGAATAATCTCCGAGA
CATCCACTGAAATCTTTAGCTTTGTGAACTTGGCGACGTACTCGGCGCGG
CTTTTGCTGCTGTTGTTAGTCACGAAAAAGACGCGCTTGCCACGGGTGCG
GAGCAGGGCAAGGGTACGGGCCGATCCAGGTAGGAGCTCGGCACCGCGCC
ACAACACGCCGTCACAGTCAAATACAAAAATGTCGTATTTATCTGTGCAT
GGACGATAGGCACATTGGGATAGGAAGCAAAGAATAGTGTCAGAGTAGAA
GTTTGTAGGGGACCCGAAGTGTCCAAGCCGCCCGTCCGTCCACTTTAGAA
GAGAGCCCTTTTTTTTTGGGGAAAACCAGCAAAGCCAACAGGGCCAGTGG
AGCCGCCCCCTCCAAGTAAGCCAGCACTAATCTTCCAGAGAAACATTTGG
ATCCAACGCTACTCTTACCGAGGACGCTGCGTAGCGCGGATGCGTCGTGG
TCTTGTAGGATCTTTAGGGCTTGGAGGGAGGAGGTTTTTGTTGCCCCGTC
GTCTTGTCGCGCCTTAGCTGCCGCCACAAAGGCCTGTGCGTCGCTGATAA
CGGTGGCCCCGTATGTTGACTTCATTGCCTTGCTTGCATTTGTGTGTTCA
CTGATGTAAGTGGGTGTCGTGTGCACCTCGACGACACTTGTTTTGGCGAG
CGGGGGCTGTCGCGGGGCTGCGCTGGCCCAGCACATGGCCACAACAACAC
ATTTTATTCCTCTCCTACAACTACACAAGCACAGGATCGAAACAAAAAGT
GGGCAACCAATGCTGCCGCTGGCATGGAGCCGACGGTACGGCCCCCTGGC
CTTCCCTCCCCTCTTTTCCCTTCTTTGGCAACCAGCCCGCCTGGTAGCCT
CCCCTTTGCCGTTACTGCGCACACACGCCTTGTCGTGCCTCCGTCAAGGC
CAAGGACGCAGTGGTGTGGCTGATGTCGCTACAAACATACGTGCACCAAC
TTTGTATCGCTATAGACATGCTTTCTCTGTGATTGTTCCAATCTTCCTAT
TCCTGCTAGGCTCTCCTACGTACGCCTTTCGAGCTGTCCCCATGCGGGCA
CGCGTTAGCTCTGAGTCCATTTCGTCCTCGACAATGGTGGAAAGAAATTT
GAAAAAATTTCGGGCAGTCACACGCTCAGACTCTGGGCTTTGTTTGTTGA
GCCTAACAGGCTCCTCATCGTCAAGTCCGGCCGCCTACCCTACCACCTCT
GAGATATCCTCCAATCCTGTTGCTGCCGCGGAGAAGGACCCACCCAGTTT
ATTGACCCCTCTTGCAGATAAAGGATTGTTACTTTGTGATTTGGCGACTA
GGCATCAATTATTTGATAATCAGGAGGAATCTATCACCCCTAGTGAGTTG
GTGGCATGCCTAAAAGCGCCGGAATCAATGGACGGTACGGAGCCAGACCC
GGAGAGCTTCCGGGCCATCTTATTCGACTTTGTGACGACCAAGCCCGAGG
CCTTTAGTTTACAAGATCTGGCCACGCTCATCCAAGCGTCATCAACTTCA
CTCAATCAGCAATCAGCCATCCTTCCATCTCTCCTCGACCTCCTTCTCGA
CACCACTACCCTCCGCATGCGTGCAAACCCCCCTAACTCCCTCCTTCCAA
CCACCTGGGTCCACCTGGCCCTCGCTTCCAACTTCCTGCCTCCTATCCTC
AAAGCCCGTCCTGCCTCTCATCGTTTTCTACAACAACTGACCACAAATCT
CTCTTCGCGTCTATCTGCCCTCTCTCCATCTGATCTTGTCCTGGCCATAA
GGGTATGGCCCAGAGAGCCAGCCGACTTGGACGATTTCAGCTGTAAGCTC
ATCCAGGCGATCTTGCTGCAGAGTATCAACAGCCTGCATGCCTTCGATCC
ACCTGAATTAACCCAGCTGATACAGGGGCTGAGAAGACCAATGACGCCCA
CACGGTTATCAATTTTGGAAGCACTCGACGAAACAGGGCAAGAAACCCCC
GATCTGAACAGCAGACAACGGCTATTCAAAGCAGCAATCAAAACAATTGC
TCGTCGTCACATCCACCAACTCTCCCCCCGCGAGCTCTCCGTATTCATAC
AAGCCTGCGTCACGGACCTGAGCTTCGCAGATTGGTCGAAAGACCTCGGA
GTCGCCTTCCCTCGTACCTATACCACTGCAGCCTTGAAGCATATCCCACA
CATGGCTCCCCTCCAAATCCTCCCCACTCTCTCCGCCTTCCTCTTCCTCC
GCTCCGTCTTCGATTTCTCCCCTGGCAGTGAAATCTACCATGGGCTAGCC
AAGATGGCAATAGAAAAGGTGGAGGAGGGAGGAAAGGAGGAAGGTGAAGA
GGATCCTTCTGTCCTCTTGTCCCTCCTTCAGACATTCGCTTTTTTTGCCA
GCCCTGAGTATGATCCCGGGGAGGTGTTGGAAGTTTTGACTCGCAAGGTA
TTGAGACATCTGCACTCCTTCTCTCCCTTCTCCCTTCGGTGTCTGGTGGA
AACGTTGGCGTTGCCGAGCCATTCGTACGTGCCTTCTTTCGGGATGCTCA
CAGAGATATCACATCACGCAGCGAATCAGCTCCTTAGACAGGATGGTGCT
GCTGCTCCTGCTGCAGCTGCTGCTATTACTGTTGCGAATGGTTCGCCGGT
TATAGTTGACTATGTCTACATTGTACGGAGTCTGGCCATGATTGTTGTGA
GGAAAGGGGCTGCAAGCTGGGGCTTACGGACGGGCATGGCAAAGGTTGGG
CAGAAGGAGGAGGAGATTGAGGGGTGGAGGGAAGAGAGGGAGAAAGGAGA
GAAAGAAGGAGGGGAAGGACCGGCGGCAGAGGGGATGTTTAGAAAGATGC
AGGAGTTTTCCCGGTATTTTTAGAAGGATAGGAGCGGCGTGTGTGTGTGT
GTGTGTGTTTGTGAGGAAGGTTTGACCATGAACTCCTGTATAGGCATCGG
GGCATTTATGTGCATTGGCCGTGTGTAAGTGATTAAGGTTTGGACGCAAA
TATGTAGGATATAAGGCTGACCGGTCAGAGACAAGAAAGATGGGAGTAGC
AGAGTGGGAGCTGATCAATTTAAGAAGGGAGCCACACACAAACACCAAGC
GACGACGAGGATGACGGGCAGCAAATGCCCGACGGAAAAAATATTGACCA
AATAATGATCACAAA

protein sequence of NO10G01390.1

>NO10G01390.1-protein ID=NO10G01390.1-protein|Name=NO10G01390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=713bp
MATTTHFIPLLQLHKHRIETKSGQPMLPLAWSRRYGPLAFPPLFSLLWQP
ARLVASPLPLLRTHALSCLRQGQGRSGVADVATNIRAPTLYRYRHAFSVI
VPIFLFLLGSPTYAFRAVPMRARVSSESISSSTMVERNLKKFRAVTRSDS
GLCLLSLTGSSSSSPAAYPTTSEISSNPVAAAEKDPPSLLTPLADKGLLL
CDLATRHQLFDNQEESITPSELVACLKAPESMDGTEPDPESFRAILFDFV
TTKPEAFSLQDLATLIQASSTSLNQQSAILPSLLDLLLDTTTLRMRANPP
NSLLPTTWVHLALASNFLPPILKARPASHRFLQQLTTNLSSRLSALSPSD
LVLAIRVWPREPADLDDFSCKLIQAILLQSINSLHAFDPPELTQLIQGLR
RPMTPTRLSILEALDETGQETPDLNSRQRLFKAAIKTIARRHIHQLSPRE
LSVFIQACVTDLSFADWSKDLGVAFPRTYTTAALKHIPHMAPLQILPTLS
AFLFLRSVFDFSPGSEIYHGLAKMAIEKVEEGGKEEGEEDPSVLLSLLQT
FAFFASPEYDPGEVLEVLTRKVLRHLHSFSPFSLRCLVETLALPSHSYVP
SFGMLTEISHHAANQLLRQDGAAAPAAAAAITVANGSPVIVDYVYIVRSL
AMIVVRKGAASWGLRTGMAKVGQKEEEIEGWREEREKGEKEGGEGPAAEG
MFRKMQEFSRYF*

mRNA from alignment at chr10:405111..409828-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G01390.1 ID=NO10G01390.1|Name=NO10G01390.1|organism=Nannochloropsis oceanica|type=mRNA|length=4718bp|location=Sequence derived from alignment at chr10:405111..409828- (Nannochloropsis oceanica)
CCCCCCCTCCGTTCCCTCCTTCATACCCACCCATTCACCGCGCCGCGCCA
CACACCACACACCCACAGCTGATTCCCCCGCGCGTCAGCCTGGAGGAGAA
CGACAGTATCGTGGCCACACCAAAGGGACAATAAATAAAGTCAAAATACG
CTCCCATTCTTGCCGTCTTTTACCAGGACCAAGGAGGAAGATTTAAATGT
CGGGCACTTGGATCGATCGTCTTCATCGTCTGCACGTCAATTTTCTCGCT
TCGTAATCTGCACGTCATTCCCACCATTCATGCCTGAAAGGGTAATATAA
GAAAACCAAATCTTCGTAAACGCGTACCCTGGATAGTAACGGAATTCTTG
CGGTCAAAATATCCTCGCTCCTTTTTGCAAGCGCTGTACTAAAAGGATGT
TACGCTTGTTCCTGTTGCCATACACATGAATTGTCACTTGATAAAATTGC
GTCCAAGCGAATGGATCTCCAGGTATCTTGGGTACCCTTGTAAAAAACAA
AAGCGCACGAGAAGCACTCTCAATCCCGCACGGGTGCTTTTGAAGCCCTC
GTGTCCTTTGGAAGTAAATGGGCTTTGAAACAATATAGACCAAATATGCC
ACTGGTTGGTTATACTGTGGTAACTCTTCTGCTATTTATTTCCGTTCGCA
AGCACATAGTCATTCCGGGCCAAGATAATCAACCGTGGGCAAGGGCTTGA
ACATTTTTCATGGCCCTCCCTATGGTCACACCCCGTTATCCGATTTTTCA
TTTCCATTCCTACACTCCATGTCATCCCCACTCAAAGCCCCCAAATGTGA
CAACAAGTATGTCGGCAACCCCCTCCCCTTCCCTTGGCCCCCTTCCTCCT
CTTCCACCACCAAAGCCTCGACCGTGCTCGTGCAACCCGTCCCCACCAAC
ACAGTATCGCAACCTCCTACAACTCCCAGCTGTATATCCGTATCTAAGCG
ATCGCCCACGACCACCGTCCGCCTCGGGTCTAGCCCATGCATTGTCATCA
ATCGGTCCACCAGCCATTTCGAGGGTTTTCCAACAGTCACAGCCATGCGA
TTCACGCTCTGTTCCACCGCAGCGACCGCGCATCCATTCCCAGGCACATT
TCGGTCGGCTAATTTATCAAATGCATCTTTATTGGTGGCCACGAATGCTG
CCCCCGGGTTTTTTTGGAGGTGCAAGCTTGCCAAGCACAGCTTCGCATAA
TTGAATGTCAGATCCCAGCCACACACCACGGCACCCACATCAGGGTCAGC
GTCAATAGCTAGAAAATCGGCTTCTGTTGCATATATTCGTGTGGCGTACT
CTTTGTCCGCACCGCAAATGGAATCAATCCCTACCAACGCCAGCTCGTCC
ACCAAGCCTTGGCAGCCAATTACGAATGCTTTTTTCACATCGGGACGCTC
CACGCGCAAATACTCGGCCGCCGCCCAAGATGAAGGAATAATCTCCGAGA
CATCCACTGAAATCTTTAGCTTTGTGAACTTGGCGACGTACTCGGCGCGG
CTTTTGCTGCTGTTGTTAGTCACGAAAAAGACGCGCTTGCCACGGGTGCG
GAGCAGGGCAAGGGTACGGGCCGATCCAGGTAGGAGCTCGGCACCGCGCC
ACAACACGCCGTCACAGTCAAATACAAAAATGTCGTATTTATCTGTGCAT
GGACGATAGGCACATTGGGATAGGAAGCAAAGAATAGTGTCAGAGTAGAA
GTTTGTAGGGGACCCGAAGTGTCCAAGCCGCCCGTCCGTCCACTTTAGAA
GAGAGCCCTTTTTTTTTGGGGAAAACCAGCAAAGCCAACAGGGCCAGTGG
AGCCGCCCCCTCCAAGTAAGCCAGCACTAATCTTCCAGAGAAACATTTGG
ATCCAACGCTACTCTTACCGAGGACGCTGCGTAGCGCGGATGCGTCGTGG
TCTTGTAGGATCTTTAGGGCTTGGAGGGAGGAGGTTTTTGTTGCCCCGTC
GTCTTGTCGCGCCTTAGCTGCCGCCACAAAGGCCTGTGCGTCGCTGATAA
CGGTGGCCCCGTATGTTGACTTCATTGCCTTGCTTGCATTTGTGTGTTCA
CTGATGTAAGTGGGTGTCGTGTGCACCTCGACGACACTTGTTTTGGCGAG
CGGGGGCTGTCGCGGGGCTGCGCTGGCCCAGCACATGGCCACAACAACAC
ATTTTATTCCTCTCCTACAACTACACAAGCACAGGATCGAAACAAAAAGT
GGGCAACCAATGCTGCCGCTGGCATGGAGCCGACGGTACGGCCCCCTGGC
CTTCCCTCCCCTCTTTTCCCTTCTTTGGCAACCAGCCCGCCTGGTAGCCT
CCCCTTTGCCGTTACTGCGCACACACGCCTTGTCGTGCCTCCGTCAAGGC
CAAGGACGCAGTGGTGTGGCTGATGTCGCTACAAACATACGTGCACCAAC
TTTGTATCGCTATAGACATGCTTTCTCTGTGATTGTTCCAATCTTCCTAT
TCCTGCTAGGCTCTCCTACGTACGCCTTTCGAGCTGTCCCCATGCGGGCA
CGCGTTAGCTCTGAGTCCATTTCGTCCTCGACAATGGTGGAAAGAAATTT
GAAAAAATTTCGGGCAGTCACACGCTCAGACTCTGGGCTTTGTTTGTTGA
GCCTAACAGGCTCCTCATCGTCAAGTCCGGCCGCCTACCCTACCACCTCT
GAGATATCCTCCAATCCTGTTGCTGCCGCGGAGAAGGACCCACCCAGTTT
ATTGACCCCTCTTGCAGATAAAGGATTGTTACTTTGTGATTTGGCGACTA
GGCATCAATTATTTGATAATCAGGAGGAATCTATCACCCCTAGTGAGTTG
GTGGCATGCCTAAAAGCGCCGGAATCAATGGACGGTACGGAGCCAGACCC
GGAGAGCTTCCGGGTACGTTAGGGTCGGTGTTTGACCCAAATTTTAATGA
TGATTAAAATTGCTTTCACCACTTATGTCTTCAGGACTGCATTAATCTTT
TAAATGTCTTCGTCACAAATTCTCCTACTGTTACCTCCATCCATCCCTTC
CCACCACCACCCACAGGCCATCTTATTCGACTTTGTGACGACCAAGCCCG
AGGCCTTTAGTTTACAAGATCTGGCCACGCTCATCCAAGCGTCATCAACT
TCACTCAATCAGCAATCAGCCATCCTTCCATCTCTCCTCGACCTCCTTCT
CGACACCACTACCCTCCGCATGCGTGCAAACCCCCCTAACTCCCTCCTTC
CAACCACCTGGGTCCACCTGGCCCTCGCTTCCAACTTCCTGCCTCCTATC
CTCAAAGCCCGTCCTGCCTCTCATCGTTTTCTACAACAACTGACCACAAA
TCTCTCTTCGCGTCTATCTGCCCTCTCTCCATCTGATCTTGTCCTGGCCA
TAAGGGTATGGCCCAGAGAGCCAGCCGACTTGGACGATTTCAGCTGTAAG
CTCATCCAGGCGATCTTGCTGCAGAGTATCAACAGCCTGCATGCCTTCGA
TCCACCTGAATTAACCCAGCTGATACAGGGGCTGAGAAGACCAATGACGC
CCACACGGTTATCAATTTTGGAAGCACTCGACGAAACAGGGCAAGAAACC
CCCGATCTGAACAGCAGACAACGGCTATTCAAAGCAGCAATCAAAACAAT
TGCTCGTCGTCACATCCACCAACTCTCCCCCCGCGAGCTCTCCGTATTCA
TACAAGCCTGCGTCACGGACCTGAGCTTCGCAGATTGGTCGAAAGACCTC
GGAGTCGCCTTCCCTCGTACCTATACCACTGCAGCCTTGAAGCATATCCC
ACACATGGCTCCCCTCCAAATCCTCCCCACTCTCTCCGCCTTCCTCTTCC
TCCGCTCCGTCTTCGATTTCTCCCCTGGCAGTGAAATCTACCATGGGCTA
GCCAAGATGGCAATAGAAAAGGTGGAGGAGGGAGGAAAGGAGGAAGGTGA
AGAGGATCCTTCTGTCCTCTTGTCCCTCCTTCAGACATTCGCTTTTTTTG
CCAGCCCTGAGTATGATCCCGGGGAGGTGTTGGAAGTTTTGACTCGCAAG
GTATTGAGACATCTGCACTCCTTCTCTCCCTTCTCCCTTCGGTGTCTGGT
GGAAACGTTGGCGTTGCCGAGCCATTCGTACGTGCCTTCTTTCGGGATGC
TCACAGAGATATCACATCACGCAGCGAATCAGCTCCTTAGACAGGATGGT
GCTGCTGCTCCTGCTGCAGCTGCTGCTATTACTGTTGCGAATGGTTCGCC
GGTTATAGTTGACTATGTCTACATTGTACGGAGTCTGGCCATGATTGTTG
TGAGGAAAGGGGCTGCAAGCTGGGGCTTACGGACGGGCATGGCAAAGGTT
GGGCAGAAGGAGGAGGAGATTGAGGGGTGGAGGGAAGAGAGGGAGAAAGG
AGAGAAAGAAGGAGGGGAAGGACCGGCGGCAGAGGGGATGTTTAGAAAGA
TGCAGGAGTTTTCCCGGTATTTTTAGAAGGATAGGAGCGGCGTGTGTGTG
TGTGTGTGTGTTTGTGAGGAAGGTTTGACCATGAACTCCTGTATAGGCAT
CGGGGCATTTATGTGCATTGGCCGTGTGTAAGTGATTAAGGTTTGGACGC
AAATATGTAGGATATAAGGCTGACCGGTCAGAGACAAGAAAGATGGGAGT
AGCAGAGTGGGAGCTGATCAATTTAAGAAGGGAGCCACACACAAACACCA
AGCGACGACGAGGATGACGGGCAGCAAATGCCCGACGGAAAAAATATTGA
CCAAATAATGATCACAAA

Coding sequence (CDS) from alignment at chr10:405111..409828-

>NO10G01390.1 ID=NO10G01390.1|Name=NO10G01390.1|organism=Nannochloropsis oceanica|type=CDS|length=2139bp|location=Sequence derived from alignment at chr10:405111..409828- (Nannochloropsis oceanica)
ATGGCCACAACAACACATTTTATTCCTCTCCTACAACTACACAAGCACAG
GATCGAAACAAAAAGTGGGCAACCAATGCTGCCGCTGGCATGGAGCCGAC
GGTACGGCCCCCTGGCCTTCCCTCCCCTCTTTTCCCTTCTTTGGCAACCA
GCCCGCCTGGTAGCCTCCCCTTTGCCGTTACTGCGCACACACGCCTTGTC
GTGCCTCCGTCAAGGCCAAGGACGCAGTGGTGTGGCTGATGTCGCTACAA
ACATACGTGCACCAACTTTGTATCGCTATAGACATGCTTTCTCTGTGATT
GTTCCAATCTTCCTATTCCTGCTAGGCTCTCCTACGTACGCCTTTCGAGC
TGTCCCCATGCGGGCACGCGTTAGCTCTGAGTCCATTTCGTCCTCGACAA
TGGTGGAAAGAAATTTGAAAAAATTTCGGGCAGTCACACGCTCAGACTCT
GGGCTTTGTTTGTTGAGCCTAACAGGCTCCTCATCGTCAAGTCCGGCCGC
CTACCCTACCACCTCTGAGATATCCTCCAATCCTGTTGCTGCCGCGGAGA
AGGACCCACCCAGTTTATTGACCCCTCTTGCAGATAAAGGATTGTTACTT
TGTGATTTGGCGACTAGGCATCAATTATTTGATAATCAGGAGGAATCTAT
CACCCCTAGTGAGTTGGTGGCATGCCTAAAAGCGCCGGAATCAATGGACG
GTACGGAGCCAGACCCGGAGAGCTTCCGGGCCATCTTATTCGACTTTGTG
ACGACCAAGCCCGAGGCCTTTAGTTTACAAGATCTGGCCACGCTCATCCA
AGCGTCATCAACTTCACTCAATCAGCAATCAGCCATCCTTCCATCTCTCC
TCGACCTCCTTCTCGACACCACTACCCTCCGCATGCGTGCAAACCCCCCT
AACTCCCTCCTTCCAACCACCTGGGTCCACCTGGCCCTCGCTTCCAACTT
CCTGCCTCCTATCCTCAAAGCCCGTCCTGCCTCTCATCGTTTTCTACAAC
AACTGACCACAAATCTCTCTTCGCGTCTATCTGCCCTCTCTCCATCTGAT
CTTGTCCTGGCCATAAGGGTATGGCCCAGAGAGCCAGCCGACTTGGACGA
TTTCAGCTGTAAGCTCATCCAGGCGATCTTGCTGCAGAGTATCAACAGCC
TGCATGCCTTCGATCCACCTGAATTAACCCAGCTGATACAGGGGCTGAGA
AGACCAATGACGCCCACACGGTTATCAATTTTGGAAGCACTCGACGAAAC
AGGGCAAGAAACCCCCGATCTGAACAGCAGACAACGGCTATTCAAAGCAG
CAATCAAAACAATTGCTCGTCGTCACATCCACCAACTCTCCCCCCGCGAG
CTCTCCGTATTCATACAAGCCTGCGTCACGGACCTGAGCTTCGCAGATTG
GTCGAAAGACCTCGGAGTCGCCTTCCCTCGTACCTATACCACTGCAGCCT
TGAAGCATATCCCACACATGGCTCCCCTCCAAATCCTCCCCACTCTCTCC
GCCTTCCTCTTCCTCCGCTCCGTCTTCGATTTCTCCCCTGGCAGTGAAAT
CTACCATGGGCTAGCCAAGATGGCAATAGAAAAGGTGGAGGAGGGAGGAA
AGGAGGAAGGTGAAGAGGATCCTTCTGTCCTCTTGTCCCTCCTTCAGACA
TTCGCTTTTTTTGCCAGCCCTGAGTATGATCCCGGGGAGGTGTTGGAAGT
TTTGACTCGCAAGGTATTGAGACATCTGCACTCCTTCTCTCCCTTCTCCC
TTCGGTGTCTGGTGGAAACGTTGGCGTTGCCGAGCCATTCGTACGTGCCT
TCTTTCGGGATGCTCACAGAGATATCACATCACGCAGCGAATCAGCTCCT
TAGACAGGATGGTGCTGCTGCTCCTGCTGCAGCTGCTGCTATTACTGTTG
CGAATGGTTCGCCGGTTATAGTTGACTATGTCTACATTGTACGGAGTCTG
GCCATGATTGTTGTGAGGAAAGGGGCTGCAAGCTGGGGCTTACGGACGGG
CATGGCAAAGGTTGGGCAGAAGGAGGAGGAGATTGAGGGGTGGAGGGAAG
AGAGGGAGAAAGGAGAGAAAGAAGGAGGGGAAGGACCGGCGGCAGAGGGG
ATGTTTAGAAAGATGCAGGAGTTTTCCCGGTATTTTTAG

Synonyms

Publications