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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr10 | genome | chr10:365157..367204 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO10G01230.1 vs.
Match: EWM25466.1 (aminopeptidase-like 1 [Nannochloropsis gaditana]) HSP 1 Score: 827.4 bits (2136), Expect = 2.800e-236 Identity = 419/577 (72.62%), Postives = 476/577 (82.50%), Query Frame = 0
Query: 20 MSIRFYALDSPELKAMETNGHLLLVGTKEALEFCSPNVAFYVNCAVKVSYLEHTGLDPPAPLLRSVTSKLSPTFDTHSCLDTWVDVDGTVVRVTLGCLPSGPASRHNCPSKPHAVTDIVKSVASGEGTLRILITLAAADHAVALGTAVARAFPLYNHKSGNG----KPLRKVEVVFNMTSAALATCMLVSGGITDETQKQQQQQQQRQQQQQVFDPSLTVLHKLQALSDGIQLCARLVDAPPNEMHTDAMVEEAGQVLHRLQKLKTQDNVTVTVIRGEELREKGFGGLYGVGKAAEHPPALVVLTLLPKVMGVGRGSGSSSGSISNSGKKDNTAGTSVVWVGKGIVYDTGGLSIKTKTGMPGMKRDMGGAAAILAAFEAAVRLGYHKGPLHAILCLAENSVAAKATRPDDIHEMYSGKTVEINNTDAEGRLVLGDGVAYAVKQLKPAVILDMATLTGAQGVATGKRHAALYCNNEALEEAVVAVGRATGDLAHALPYAPEFFQSEFRSAVADMKNSVANRENAQCSCAGQFVGAHIKEWVEGEGHGWVHVDMAYPVHNGERATGYGVNLLVGLLERL 593
MS+RFYALDSPEL++ME +GH L++GTK AL+ C PN+AFYVN AVKVS L+ TG DP APLL ++ + L+PTFD H C DTWVDVDGT+VRVTLGCLPSG ASRHNCP+KPHA T+IVKSVA+GEG LRIL+ L ADHAVALGTAVARAFP+Y+ KS KP R VEVVFNMT ALA+C + G + + + +Q + QVFD S+T++ +++A++ GI+L ARLVDAP NEMHTDAMVEEA QVLHRL++L QD+V++TV+RGEELREKGFGGLYGVGKAAEHPPALVVL+L+P+ +T SVVWVGKGIVYDTGGLSIKTKTGMPGMKRDMGGAAAILAAFE A RLGY K PLHAILCLAENSVAAKATRPDDIHEMYSGKTVEINNTDAEGRLVLGDGVAYAV+ L P+V++DMATLTGAQGVATG RHAALYCN+E LE A V VGRATGDL H +PYAPEFFQ EFRS+VADMKNSVANRENAQCSCAGQF+GA I EW+ G+GHGW+HVDMAYPVHNGERATGYGVNLLVGLLERL
Sbjct: 1 MSLRFYALDSPELRSMEQHGHFLMLGTKVALDLCCPNLAFYVNRAVKVSSLDATGSDPSAPLLSAMANDLTPTFDRHFCSDTWVDVDGTLVRVTLGCLPSGEASRHNCPAKPHAATEIVKSVANGEGPLRILLALTTADHAVALGTAVARAFPMYSRKSNGSSSASKPPRNVEVVFNMTMEALASCTFLGGQGVNFSSDSGSDEPGKQGEHQVFDASMTMVSRVEAMAAGIRLSARLVDAPANEMHTDAMVEEARQVLHRLRRLNLQDSVSMTVLRGEELREKGFGGLYGVGKAAEHPPALVVLSLVPRAN-------------ERPASTPDTLKPSVVWVGKGIVYDTGGLSIKTKTGMPGMKRDMGGAAAILAAFEVAARLGYRKRPLHAILCLAENSVAAKATRPDDIHEMYSGKTVEINNTDAEGRLVLGDGVAYAVQHLAPSVLVDMATLTGAQGVATGLRHAALYCNDERLEAAAVEVGRATGDLTHPVPYAPEFFQHEFRSSVADMKNSVANRENAQCSCAGQFIGAQISEWLGGKGHGWIHVDMAYPVHNGERATGYGVNLLVGLLERL 564
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO10G01230.1 ID=NO10G01230.1|Name=NO10G01230.1|organism=Nannochloropsis oceanica|type=mRNA|length=2048bp
GGATGGGGTCCTTCGGTCTTGTGCACTTTAAGCGCCTCTAAGCTTGTGTG
GCCCTGACGCACCTACGCCCGTGTTGCCACATCGATCTGTTCTGAAATGG
CCGTCGAGGCGAGGCCGGGGCAAAACGTTTGAAATGATGGTGGGGTATAG
CTGAATCTCGTGTTCTTCCGTCGTCTTCTCCTTTCGCCCTCAATGCAAGC
AAACATCCTACACGCCGCCACCTTACAGACACAGTCTCCTCTTAACACCA
TGTCGATCCGCTTCTACGCGCTCGACTCCCCCGAGCTCAAGGCCATGGAG
ACAAACGGGCACCTCCTGTTGGTGGGCACCAAAGAAGCCTTGGAATTCTG
CTCTCCAAACGTAGCTTTTTATGTCAATTGCGCCGTCAAGGTCAGCTACC
TAGAGCATACGGGCCTAGACCCTCCTGCGCCTTTGCTTCGCTCCGTCACG
AGCAAGCTGAGCCCCACCTTTGATACCCATTCCTGCCTCGACACATGGGT
GGACGTCGATGGCACAGTGGTCCGTGTTACGTTGGGATGCCTTCCTTCCG
GCCCCGCGTCCCGACACAACTGTCCATCCAAGCCCCATGCCGTCACGGAT
ATTGTCAAGAGCGTGGCAAGCGGAGAAGGAACATTGCGAATTCTTATTAC
ATTGGCTGCTGCCGACCACGCCGTGGCGTTGGGCACGGCCGTGGCCAGAG
CCTTCCCGCTTTACAACCACAAGAGCGGCAACGGCAAGCCCTTGCGCAAG
GTGGAGGTGGTCTTCAACATGACCAGCGCCGCATTGGCAACTTGCATGCT
GGTGAGCGGAGGCATTACGGATGAGACGCAGAAGCAGCAGCAGCAGCAGC
AGCAGCGGCAGCAGCAACAACAAGTCTTTGATCCTTCCTTGACGGTCCTC
CACAAATTGCAGGCCTTGTCCGACGGCATCCAGCTTTGTGCCCGCCTCGT
TGACGCCCCGCCCAATGAGATGCACACGGATGCCATGGTCGAGGAAGCGG
GACAGGTCTTGCATCGCCTACAGAAGCTCAAGACTCAGGATAACGTGACT
GTTACCGTAATCCGAGGAGAAGAATTGAGAGAGAAGGGCTTTGGGGGCCT
GTACGGTGTGGGCAAGGCGGCGGAGCACCCGCCGGCACTGGTGGTGCTGA
CCTTGCTACCCAAGGTGATGGGGGTTGGACGAGGGTCGGGTAGTAGTAGC
GGCAGCATCAGCAACAGTGGCAAGAAAGATAACACCGCGGGGACCAGTGT
GGTGTGGGTGGGGAAGGGAATTGTGTATGACACGGGAGGGTTAAGTATCA
AAACCAAAACGGGCATGCCTGGTATGAAGAGGGACATGGGTGGCGCGGCT
GCCATCCTGGCGGCTTTCGAAGCTGCTGTTCGCCTTGGGTACCACAAAGG
GCCTTTGCATGCTATTTTGTGCTTGGCGGAAAATTCGGTAGCGGCGAAGG
CGACGAGGCCAGATGACATTCATGAAATGTACAGTGGCAAGACTGTGGAG
ATAAACAACACCGATGCCGAGGGAAGGTTGGTTTTGGGGGATGGCGTTGC
GTATGCCGTGAAGCAGTTGAAGCCTGCCGTTATTTTGGACATGGCGACAT
TAACGGGCGCCCAGGGGGTGGCCACGGGGAAGAGGCACGCCGCTCTCTAT
TGTAACAATGAAGCCTTGGAAGAGGCGGTGGTGGCGGTTGGGAGAGCGAC
AGGGGATCTAGCGCACGCCCTGCCATATGCCCCGGAATTCTTCCAGAGTG
AGTTCCGCTCGGCGGTGGCGGACATGAAAAACAGCGTGGCCAACCGGGAG
AACGCGCAGTGCTCGTGCGCGGGGCAGTTTGTGGGGGCTCATATTAAGGA
GTGGGTGGAAGGCGAAGGGCATGGATGGGTGCATGTGGATATGGCCTATC
CCGTGCACAATGGAGAGCGGGCGACGGGCTATGGCGTGAATTTGTTGGTT
GGCTTGTTGGAACGGCTGTAGGGCGGAGGGGAGGGAGGGAGGGCCGGAGG
AAAGAGGAGGTAATTGGAAGAAAAGAAGAAAAGAATTCAAGATCCGAT back to topprotein sequence of NO10G01230.1 >NO10G01230.1-protein ID=NO10G01230.1-protein|Name=NO10G01230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=593bp
MQANILHAATLQTQSPLNTMSIRFYALDSPELKAMETNGHLLLVGTKEAL
EFCSPNVAFYVNCAVKVSYLEHTGLDPPAPLLRSVTSKLSPTFDTHSCLD
TWVDVDGTVVRVTLGCLPSGPASRHNCPSKPHAVTDIVKSVASGEGTLRI
LITLAAADHAVALGTAVARAFPLYNHKSGNGKPLRKVEVVFNMTSAALAT
CMLVSGGITDETQKQQQQQQQRQQQQQVFDPSLTVLHKLQALSDGIQLCA
RLVDAPPNEMHTDAMVEEAGQVLHRLQKLKTQDNVTVTVIRGEELREKGF
GGLYGVGKAAEHPPALVVLTLLPKVMGVGRGSGSSSGSISNSGKKDNTAG
TSVVWVGKGIVYDTGGLSIKTKTGMPGMKRDMGGAAAILAAFEAAVRLGY
HKGPLHAILCLAENSVAAKATRPDDIHEMYSGKTVEINNTDAEGRLVLGD
GVAYAVKQLKPAVILDMATLTGAQGVATGKRHAALYCNNEALEEAVVAVG
RATGDLAHALPYAPEFFQSEFRSAVADMKNSVANRENAQCSCAGQFVGAH
IKEWVEGEGHGWVHVDMAYPVHNGERATGYGVNLLVGLLERL* back to topmRNA from alignment at chr10:365157..367204- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO10G01230.1 ID=NO10G01230.1|Name=NO10G01230.1|organism=Nannochloropsis oceanica|type=mRNA|length=2048bp|location=Sequence derived from alignment at chr10:365157..367204- (Nannochloropsis oceanica)
GGATGGGGTCCTTCGGTCTTGTGCACTTTAAGCGCCTCTAAGCTTGTGTG
GCCCTGACGCACCTACGCCCGTGTTGCCACATCGATCTGTTCTGAAATGG
CCGTCGAGGCGAGGCCGGGGCAAAACGTTTGAAATGATGGTGGGGTATAG
CTGAATCTCGTGTTCTTCCGTCGTCTTCTCCTTTCGCCCTCAATGCAAGC
AAACATCCTACACGCCGCCACCTTACAGACACAGTCTCCTCTTAACACCA
TGTCGATCCGCTTCTACGCGCTCGACTCCCCCGAGCTCAAGGCCATGGAG
ACAAACGGGCACCTCCTGTTGGTGGGCACCAAAGAAGCCTTGGAATTCTG
CTCTCCAAACGTAGCTTTTTATGTCAATTGCGCCGTCAAGGTCAGCTACC
TAGAGCATACGGGCCTAGACCCTCCTGCGCCTTTGCTTCGCTCCGTCACG
AGCAAGCTGAGCCCCACCTTTGATACCCATTCCTGCCTCGACACATGGGT
GGACGTCGATGGCACAGTGGTCCGTGTTACGTTGGGATGCCTTCCTTCCG
GCCCCGCGTCCCGACACAACTGTCCATCCAAGCCCCATGCCGTCACGGAT
ATTGTCAAGAGCGTGGCAAGCGGAGAAGGAACATTGCGAATTCTTATTAC
ATTGGCTGCTGCCGACCACGCCGTGGCGTTGGGCACGGCCGTGGCCAGAG
CCTTCCCGCTTTACAACCACAAGAGCGGCAACGGCAAGCCCTTGCGCAAG
GTGGAGGTGGTCTTCAACATGACCAGCGCCGCATTGGCAACTTGCATGCT
GGTGAGCGGAGGCATTACGGATGAGACGCAGAAGCAGCAGCAGCAGCAGC
AGCAGCGGCAGCAGCAACAACAAGTCTTTGATCCTTCCTTGACGGTCCTC
CACAAATTGCAGGCCTTGTCCGACGGCATCCAGCTTTGTGCCCGCCTCGT
TGACGCCCCGCCCAATGAGATGCACACGGATGCCATGGTCGAGGAAGCGG
GACAGGTCTTGCATCGCCTACAGAAGCTCAAGACTCAGGATAACGTGACT
GTTACCGTAATCCGAGGAGAAGAATTGAGAGAGAAGGGCTTTGGGGGCCT
GTACGGTGTGGGCAAGGCGGCGGAGCACCCGCCGGCACTGGTGGTGCTGA
CCTTGCTACCCAAGGTGATGGGGGTTGGACGAGGGTCGGGTAGTAGTAGC
GGCAGCATCAGCAACAGTGGCAAGAAAGATAACACCGCGGGGACCAGTGT
GGTGTGGGTGGGGAAGGGAATTGTGTATGACACGGGAGGGTTAAGTATCA
AAACCAAAACGGGCATGCCTGGTATGAAGAGGGACATGGGTGGCGCGGCT
GCCATCCTGGCGGCTTTCGAAGCTGCTGTTCGCCTTGGGTACCACAAAGG
GCCTTTGCATGCTATTTTGTGCTTGGCGGAAAATTCGGTAGCGGCGAAGG
CGACGAGGCCAGATGACATTCATGAAATGTACAGTGGCAAGACTGTGGAG
ATAAACAACACCGATGCCGAGGGAAGGTTGGTTTTGGGGGATGGCGTTGC
GTATGCCGTGAAGCAGTTGAAGCCTGCCGTTATTTTGGACATGGCGACAT
TAACGGGCGCCCAGGGGGTGGCCACGGGGAAGAGGCACGCCGCTCTCTAT
TGTAACAATGAAGCCTTGGAAGAGGCGGTGGTGGCGGTTGGGAGAGCGAC
AGGGGATCTAGCGCACGCCCTGCCATATGCCCCGGAATTCTTCCAGAGTG
AGTTCCGCTCGGCGGTGGCGGACATGAAAAACAGCGTGGCCAACCGGGAG
AACGCGCAGTGCTCGTGCGCGGGGCAGTTTGTGGGGGCTCATATTAAGGA
GTGGGTGGAAGGCGAAGGGCATGGATGGGTGCATGTGGATATGGCCTATC
CCGTGCACAATGGAGAGCGGGCGACGGGCTATGGCGTGAATTTGTTGGTT
GGCTTGTTGGAACGGCTGTAGGGCGGAGGGGAGGGAGGGAGGGCCGGAGG
AAAGAGGAGGTAATTGGAAGAAAAGAAGAAAAGAATTCAAGATCCGAT back to topCoding sequence (CDS) from alignment at chr10:365157..367204- >NO10G01230.1 ID=NO10G01230.1|Name=NO10G01230.1|organism=Nannochloropsis oceanica|type=CDS|length=1779bp|location=Sequence derived from alignment at chr10:365157..367204- (Nannochloropsis oceanica)
ATGCAAGCAAACATCCTACACGCCGCCACCTTACAGACACAGTCTCCTCT
TAACACCATGTCGATCCGCTTCTACGCGCTCGACTCCCCCGAGCTCAAGG
CCATGGAGACAAACGGGCACCTCCTGTTGGTGGGCACCAAAGAAGCCTTG
GAATTCTGCTCTCCAAACGTAGCTTTTTATGTCAATTGCGCCGTCAAGGT
CAGCTACCTAGAGCATACGGGCCTAGACCCTCCTGCGCCTTTGCTTCGCT
CCGTCACGAGCAAGCTGAGCCCCACCTTTGATACCCATTCCTGCCTCGAC
ACATGGGTGGACGTCGATGGCACAGTGGTCCGTGTTACGTTGGGATGCCT
TCCTTCCGGCCCCGCGTCCCGACACAACTGTCCATCCAAGCCCCATGCCG
TCACGGATATTGTCAAGAGCGTGGCAAGCGGAGAAGGAACATTGCGAATT
CTTATTACATTGGCTGCTGCCGACCACGCCGTGGCGTTGGGCACGGCCGT
GGCCAGAGCCTTCCCGCTTTACAACCACAAGAGCGGCAACGGCAAGCCCT
TGCGCAAGGTGGAGGTGGTCTTCAACATGACCAGCGCCGCATTGGCAACT
TGCATGCTGGTGAGCGGAGGCATTACGGATGAGACGCAGAAGCAGCAGCA
GCAGCAGCAGCAGCGGCAGCAGCAACAACAAGTCTTTGATCCTTCCTTGA
CGGTCCTCCACAAATTGCAGGCCTTGTCCGACGGCATCCAGCTTTGTGCC
CGCCTCGTTGACGCCCCGCCCAATGAGATGCACACGGATGCCATGGTCGA
GGAAGCGGGACAGGTCTTGCATCGCCTACAGAAGCTCAAGACTCAGGATA
ACGTGACTGTTACCGTAATCCGAGGAGAAGAATTGAGAGAGAAGGGCTTT
GGGGGCCTGTACGGTGTGGGCAAGGCGGCGGAGCACCCGCCGGCACTGGT
GGTGCTGACCTTGCTACCCAAGGTGATGGGGGTTGGACGAGGGTCGGGTA
GTAGTAGCGGCAGCATCAGCAACAGTGGCAAGAAAGATAACACCGCGGGG
ACCAGTGTGGTGTGGGTGGGGAAGGGAATTGTGTATGACACGGGAGGGTT
AAGTATCAAAACCAAAACGGGCATGCCTGGTATGAAGAGGGACATGGGTG
GCGCGGCTGCCATCCTGGCGGCTTTCGAAGCTGCTGTTCGCCTTGGGTAC
CACAAAGGGCCTTTGCATGCTATTTTGTGCTTGGCGGAAAATTCGGTAGC
GGCGAAGGCGACGAGGCCAGATGACATTCATGAAATGTACAGTGGCAAGA
CTGTGGAGATAAACAACACCGATGCCGAGGGAAGGTTGGTTTTGGGGGAT
GGCGTTGCGTATGCCGTGAAGCAGTTGAAGCCTGCCGTTATTTTGGACAT
GGCGACATTAACGGGCGCCCAGGGGGTGGCCACGGGGAAGAGGCACGCCG
CTCTCTATTGTAACAATGAAGCCTTGGAAGAGGCGGTGGTGGCGGTTGGG
AGAGCGACAGGGGATCTAGCGCACGCCCTGCCATATGCCCCGGAATTCTT
CCAGAGTGAGTTCCGCTCGGCGGTGGCGGACATGAAAAACAGCGTGGCCA
ACCGGGAGAACGCGCAGTGCTCGTGCGCGGGGCAGTTTGTGGGGGCTCAT
ATTAAGGAGTGGGTGGAAGGCGAAGGGCATGGATGGGTGCATGTGGATAT
GGCCTATCCCGTGCACAATGGAGAGCGGGCGACGGGCTATGGCGTGAATT
TGTTGGTTGGCTTGTTGGAACGGCTGTAG back to top
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