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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr10 | genome | chr10:352456..355215 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO10G01190.1 vs.
Match: CBN79629.1 (hypothetical protein Esi_0283_0026 [Ectocarpus siliculosus]) HSP 1 Score: 80.9 bits (198), Expect = 2.300e-11 Identity = 89/343 (25.95%), Postives = 142/343 (41.40%), Query Frame = 0
Query: 512 LAEWT--NTHAYELNNILTQTRERSNVLSIILETLEGDAVQDGGKKSSGSKSGKVLV-ITAMSTEEAHRAKTLLELHLKNQQELLRTERRLQQVQNKFLVVEEEVAAGLRIEFGIRKELGRVVVGKKGERVKRVLAETGVSSINVGDDG------------------------------------MIRVVGPTVAAVMKARELLELVQEDVQVPLEAVAWF---------------SCAVLDNLKKKSGCVILRTDKVGTYVQQQQQQEASESRK----------VTVVRIVGTHKQVEIARLLVDTQIEYGGRHQALRSSKEQMLQMLNHAGASYSNKSGSR 791
+A+W N+ E +L R S V+S+ + ++ G K + ++ KV V I A + +A A+ LL+ H K++ ELLR E + ++ E EV+ GLR++F R E ++VGK G R++ + TG SI V D G + + GP +V +ARE +EL + + V + A C V+D L+ S C + + QQQQQQ A ++ V VR++G V+ ARLL+ +EY R + LR + L AS+ + +R
Sbjct: 78 IAQWAADNSRGGEFTKVLEAVRRDSGVVSVDTRAV----LKQGRGKGARAQIDKVHVDIRAATPAQARVARALLQTHFKSRSELLRLEHARRSMEGSLSAFEREVSQGLRVQFASRPEWIGLLVGKAGSRIRGLRKSTG-CSIEVIDGGGGGGRGGPDGSCGGGGGGGGGGHKAARGQPPAPSSCRVVICGPDAGSVQRAREQMELTEVRIAVNPQQAAVLGRLPRAKLLDLRQQSQCMVVDLLQSGSACQGRQQQQQQQQQQQQQQQNAPPTKNNSSSSGAVTGVMSVRVIGPRPTVDSARLLLGVVLEYMDRERELREGDNVVRGKLLDMQASFGHPGTAR 415
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO10G01190.1 ID=NO10G01190.1|Name=NO10G01190.1|organism=Nannochloropsis oceanica|type=mRNA|length=2760bp ATGACTGTATCGCCCTCCACACTCGCTGTGGCTTCGAGCCCTGAGGCAGC GGGTGTGCCACGCCCCGATGACGACGAGCCGTCCCTTCCCCAGGAGACAT CAAAAACACCTCTGTCGAACTCCACTTCAGACATTCCCAGGCCTTTGATA GCCACAGTTGTGGCTGCTGCTGCCGAAGAAGCCAGCCACGGGAGTGATGA CACATCTACCGCCAGTGTCGCCGTCGATGCGCCCACGCCTCTGTCCCCCC TCTCGCCGTCCGCAGCCGCTTGGGGCAGGCCCCTTCAACCCTTGCCTGCT CAAGTGAAGGTGAACGTCAACCCTGCCCTGACCACGCAACTCCAAAACAT GGCTCTTGTTAGTAACACGAGCTCGAAGTCAGCCAAGGGACAAAAGGGGC GGGAGTCCCCGGGAGATACTCCAACGTCTAGCACCCCCAAGGACAAGGAC ACGTCGAAGCCGCACGAGCAGCAGGAGCAACAGGGTACCGCGTCTCCCAC CGTACCGGCACCCGCTGCTGTTATGGCCCAGTCCTCTCCCGACAATGAAA CCAAGAAGAGTCAGGCCATGGACGAGAGCAAGAGCACCCTTAAAGCGATG GATTTACCCGCTGTGGTGGTGGAGGAGGAAGAAGCAGGGAAGGAAGAAAA GGAGATCTCGACTCTCAAGTCAGCGACGATGCAAAGAGATCAGCATGACG CGGCGACAAAAAAAGAAGGAACCAACAGGAGGGAGTTGATGGATAAAAAG GTCCCCGGAGATGAATCGCCTTCCCCGCCGGCGCAACAACCACCCATACA AGCCCAGCAGTGTAAGCAGGAGCAGGAGCATCTGAAAAAGCAGGAGTCTG CCGCTTCAGAACAAGCCTTTCCTGTCGTCGTGGAAAGAGGAGCTACCAAG CAAGCACAGCAGCAGCAGCAGCAGCAAAAACAGAAACATGAAGAAATTGA AATGACTGTGTCGATGAACGCTCCATCCGCCGCAGTCATGGTGCAACAGC CCTGGGAAGCAACGAAACAGAAGCGGCAGAAGCGAAGGAGCCAGGGAAAG CAGGAGTTTGACAATCTGGAACAAATCCCTACTCCTTCCTTGGAAGGAGG GCCTTCTAAGCAAGTACAGCAGCAGCAGCCTAACGCACTTGTGCAGCATC AGCACCATCACCATAACGGGCAGCAACATGAGGAGAAGGGAGGGACCGAA TCGCAGCAGCCCCTTTTGACTGCCGGAGAAAGGCACCCGCCCACACAACA TCAGCAGCCACAGCAACAAGAGAGAGAATCAATTGCAATGCAGTATATCG GCTCTACTGCTGGGCAACGGCAGCAAGAACGACAAGGCAAGGAGCAACAA AATCAGCTGCCACCTGCTCCAGCGCCTTCATCGACCTCCCTCCCTCGCAA CCCTGTCCCCGGCCTCACTATTGCGCTAGCTCATCATCCTTCCGCTCCTT TAGTCGAGCGAGTCCGAACGCATCTTGCAGCACTGGAGCGGAGCGGCACC GTGGTTATGGAGTGTCTGCCTGTCCCTCTGGCCCTTGCCGAGTGGACAAA CACGCACGCCTATGAGCTCAACAATATTCTGACTCAGACTAGGGAGAGAA GTAATGTTCTGTCCATTATTTTGGAGACGCTAGAAGGAGATGCAGTACAG GATGGAGGAAAAAAATCCTCAGGCTCGAAGTCGGGGAAGGTGCTTGTGAT TACAGCCATGTCGACAGAGGAAGCGCATAGGGCCAAGACGTTGCTTGAGT TGCATTTGAAAAACCAACAGGAGCTCCTTAGGACCGAACGACGGTTACAA CAAGTACAGAATAAATTCTTGGTGGTGGAGGAAGAGGTGGCTGCGGGGTT GCGAATAGAGTTTGGGATTCGGAAGGAGTTGGGAAGGGTTGTAGTGGGGA AGAAGGGGGAGCGTGTCAAAAGAGTGTTAGCTGAGACGGGCGTCTCGTCG ATCAACGTTGGAGATGATGGCATGATTCGGGTTGTGGGACCGACAGTCGC GGCGGTGATGAAAGCGAGGGAGCTGCTGGAATTGGTACAAGAGGATGTAC AGGTGCCGCTTGAGGCGGTGGCATGGTTTTCCTGCGCTGTACTTGACAAT TTGAAGAAAAAGTCGGGCTGTGTCATACTACGGACTGATAAGGTTGGTAC TTACGTGCAGCAGCAGCAGCAGCAGGAGGCTTCGGAGAGTCGAAAAGTGA CCGTAGTGCGAATTGTGGGCACGCATAAGCAAGTGGAAATTGCCCGCCTT CTTGTAGACACCCAGATTGAGTACGGGGGCCGGCACCAGGCCTTACGCTC TTCCAAGGAGCAGATGCTGCAGATGTTAAACCATGCTGGCGCCTCTTACA GCAACAAAAGTGGTTCCCGACGCCTCCAGCTAGAGCAGCAGAAACTCCGC CCCCAGCAGCAGCCACGGTTTCAAACCGATGCTCTCTTGCACGCTGGTAG TGGAAAGGGCCGTAGTATTGCGCATAGAGGTGGCGGTGGAGAGAAAGCGG CCGAGACTCTGGGAGTGCGACCGCAGAAACAGCAGCAGCAGCAGCAGCAA CGTAAGCCGTTGTCGGCGTTTGAAGCAGCGAGCGTCCAGGAAAGCAGCAG CAGCGACATGCTCCCAAGCGCGTCGAGGACCAGGGGCCGTGGCAAGGCTG CCCGCATCAGCAGTAAAAATGGCGGCGCCAGTGGCGATGATGCTACAAGC GCAAGCGCTGCAATGGCACCGTCGCTGCCTGCAAAAAACGAGGACAACCG CACCAAATAA back to topprotein sequence of NO10G01190.1 >NO10G01190.1-protein ID=NO10G01190.1-protein|Name=NO10G01190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=920bp MTVSPSTLAVASSPEAAGVPRPDDDEPSLPQETSKTPLSNSTSDIPRPLI ATVVAAAAEEASHGSDDTSTASVAVDAPTPLSPLSPSAAAWGRPLQPLPA QVKVNVNPALTTQLQNMALVSNTSSKSAKGQKGRESPGDTPTSSTPKDKD TSKPHEQQEQQGTASPTVPAPAAVMAQSSPDNETKKSQAMDESKSTLKAM DLPAVVVEEEEAGKEEKEISTLKSATMQRDQHDAATKKEGTNRRELMDKK VPGDESPSPPAQQPPIQAQQCKQEQEHLKKQESAASEQAFPVVVERGATK QAQQQQQQQKQKHEEIEMTVSMNAPSAAVMVQQPWEATKQKRQKRRSQGK QEFDNLEQIPTPSLEGGPSKQVQQQQPNALVQHQHHHHNGQQHEEKGGTE SQQPLLTAGERHPPTQHQQPQQQERESIAMQYIGSTAGQRQQERQGKEQQ NQLPPAPAPSSTSLPRNPVPGLTIALAHHPSAPLVERVRTHLAALERSGT VVMECLPVPLALAEWTNTHAYELNNILTQTRERSNVLSIILETLEGDAVQ DGGKKSSGSKSGKVLVITAMSTEEAHRAKTLLELHLKNQQELLRTERRLQ QVQNKFLVVEEEVAAGLRIEFGIRKELGRVVVGKKGERVKRVLAETGVSS INVGDDGMIRVVGPTVAAVMKARELLELVQEDVQVPLEAVAWFSCAVLDN LKKKSGCVILRTDKVGTYVQQQQQQEASESRKVTVVRIVGTHKQVEIARL LVDTQIEYGGRHQALRSSKEQMLQMLNHAGASYSNKSGSRRLQLEQQKLR PQQQPRFQTDALLHAGSGKGRSIAHRGGGGEKAAETLGVRPQKQQQQQQQ RKPLSAFEAASVQESSSSDMLPSASRTRGRGKAARISSKNGGASGDDATS ASAAMAPSLPAKNEDNRTK* back to topmRNA from alignment at chr10:352456..355215+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO10G01190.1 ID=NO10G01190.1|Name=NO10G01190.1|organism=Nannochloropsis oceanica|type=mRNA|length=2760bp|location=Sequence derived from alignment at chr10:352456..355215+ (Nannochloropsis oceanica) ATGACTGTATCGCCCTCCACACTCGCTGTGGCTTCGAGCCCTGAGGCAGC
GGGTGTGCCACGCCCCGATGACGACGAGCCGTCCCTTCCCCAGGAGACAT
CAAAAACACCTCTGTCGAACTCCACTTCAGACATTCCCAGGCCTTTGATA
GCCACAGTTGTGGCTGCTGCTGCCGAAGAAGCCAGCCACGGGAGTGATGA
CACATCTACCGCCAGTGTCGCCGTCGATGCGCCCACGCCTCTGTCCCCCC
TCTCGCCGTCCGCAGCCGCTTGGGGCAGGCCCCTTCAACCCTTGCCTGCT
CAAGTGAAGGTGAACGTCAACCCTGCCCTGACCACGCAACTCCAAAACAT
GGCTCTTGTTAGTAACACGAGCTCGAAGTCAGCCAAGGGACAAAAGGGGC
GGGAGTCCCCGGGAGATACTCCAACGTCTAGCACCCCCAAGGACAAGGAC
ACGTCGAAGCCGCACGAGCAGCAGGAGCAACAGGGTACCGCGTCTCCCAC
CGTACCGGCACCCGCTGCTGTTATGGCCCAGTCCTCTCCCGACAATGAAA
CCAAGAAGAGTCAGGCCATGGACGAGAGCAAGAGCACCCTTAAAGCGATG
GATTTACCCGCTGTGGTGGTGGAGGAGGAAGAAGCAGGGAAGGAAGAAAA
GGAGATCTCGACTCTCAAGTCAGCGACGATGCAAAGAGATCAGCATGACG
CGGCGACAAAAAAAGAAGGAACCAACAGGAGGGAGTTGATGGATAAAAAG
GTCCCCGGAGATGAATCGCCTTCCCCGCCGGCGCAACAACCACCCATACA
AGCCCAGCAGTGTAAGCAGGAGCAGGAGCATCTGAAAAAGCAGGAGTCTG
CCGCTTCAGAACAAGCCTTTCCTGTCGTCGTGGAAAGAGGAGCTACCAAG
CAAGCACAGCAGCAGCAGCAGCAGCAAAAACAGAAACATGAAGAAATTGA
AATGACTGTGTCGATGAACGCTCCATCCGCCGCAGTCATGGTGCAACAGC
CCTGGGAAGCAACGAAACAGAAGCGGCAGAAGCGAAGGAGCCAGGGAAAG
CAGGAGTTTGACAATCTGGAACAAATCCCTACTCCTTCCTTGGAAGGAGG
GCCTTCTAAGCAAGTACAGCAGCAGCAGCCTAACGCACTTGTGCAGCATC
AGCACCATCACCATAACGGGCAGCAACATGAGGAGAAGGGAGGGACCGAA
TCGCAGCAGCCCCTTTTGACTGCCGGAGAAAGGCACCCGCCCACACAACA
TCAGCAGCCACAGCAACAAGAGAGAGAATCAATTGCAATGCAGTATATCG
GCTCTACTGCTGGGCAACGGCAGCAAGAACGACAAGGCAAGGAGCAACAA
AATCAGCTGCCACCTGCTCCAGCGCCTTCATCGACCTCCCTCCCTCGCAA
CCCTGTCCCCGGCCTCACTATTGCGCTAGCTCATCATCCTTCCGCTCCTT
TAGTCGAGCGAGTCCGAACGCATCTTGCAGCACTGGAGCGGAGCGGCACC
GTGGTTATGGAGTGTCTGCCTGTCCCTCTGGCCCTTGCCGAGTGGACAAA
CACGCACGCCTATGAGCTCAACAATATTCTGACTCAGACTAGGGAGAGAA
GTAATGTTCTGTCCATTATTTTGGAGACGCTAGAAGGAGATGCAGTACAG
GATGGAGGAAAAAAATCCTCAGGCTCGAAGTCGGGGAAGGTGCTTGTGAT
TACAGCCATGTCGACAGAGGAAGCGCATAGGGCCAAGACGTTGCTTGAGT
TGCATTTGAAAAACCAACAGGAGCTCCTTAGGACCGAACGACGGTTACAA
CAAGTACAGAATAAATTCTTGGTGGTGGAGGAAGAGGTGGCTGCGGGGTT
GCGAATAGAGTTTGGGATTCGGAAGGAGTTGGGAAGGGTTGTAGTGGGGA
AGAAGGGGGAGCGTGTCAAAAGAGTGTTAGCTGAGACGGGCGTCTCGTCG
ATCAACGTTGGAGATGATGGCATGATTCGGGTTGTGGGACCGACAGTCGC
GGCGGTGATGAAAGCGAGGGAGCTGCTGGAATTGGTACAAGAGGATGTAC
AGGTGCCGCTTGAGGCGGTGGCATGGTTTTCCTGCGCTGTACTTGACAAT
TTGAAGAAAAAGTCGGGCTGTGTCATACTACGGACTGATAAGGTTGGTAC
TTACGTGCAGCAGCAGCAGCAGCAGGAGGCTTCGGAGAGTCGAAAAGTGA
CCGTAGTGCGAATTGTGGGCACGCATAAGCAAGTGGAAATTGCCCGCCTT
CTTGTAGACACCCAGATTGAGTACGGGGGCCGGCACCAGGCCTTACGCTC
TTCCAAGGAGCAGATGCTGCAGATGTTAAACCATGCTGGCGCCTCTTACA
GCAACAAAAGTGGTTCCCGACGCCTCCAGCTAGAGCAGCAGAAACTCCGC
CCCCAGCAGCAGCCACGGTTTCAAACCGATGCTCTCTTGCACGCTGGTAG
TGGAAAGGGCCGTAGTATTGCGCATAGAGGTGGCGGTGGAGAGAAAGCGG
CCGAGACTCTGGGAGTGCGACCGCAGAAACAGCAGCAGCAGCAGCAGCAA
CGTAAGCCGTTGTCGGCGTTTGAAGCAGCGAGCGTCCAGGAAAGCAGCAG
CAGCGACATGCTCCCAAGCGCGTCGAGGACCAGGGGCCGTGGCAAGGCTG
CCCGCATCAGCAGTAAAAATGGCGGCGCCAGTGGCGATGATGCTACAAGC
GCAAGCGCTGCAATGGCACCGTCGCTGCCTGCAAAAAACGAGGACAACCG
CACCAAATAA back to topCoding sequence (CDS) from alignment at chr10:352456..355215+ >NO10G01190.1 ID=NO10G01190.1|Name=NO10G01190.1|organism=Nannochloropsis oceanica|type=CDS|length=2760bp|location=Sequence derived from alignment at chr10:352456..355215+ (Nannochloropsis oceanica) ATGACTGTATCGCCCTCCACACTCGCTGTGGCTTCGAGCCCTGAGGCAGC GGGTGTGCCACGCCCCGATGACGACGAGCCGTCCCTTCCCCAGGAGACAT CAAAAACACCTCTGTCGAACTCCACTTCAGACATTCCCAGGCCTTTGATA GCCACAGTTGTGGCTGCTGCTGCCGAAGAAGCCAGCCACGGGAGTGATGA CACATCTACCGCCAGTGTCGCCGTCGATGCGCCCACGCCTCTGTCCCCCC TCTCGCCGTCCGCAGCCGCTTGGGGCAGGCCCCTTCAACCCTTGCCTGCT CAAGTGAAGGTGAACGTCAACCCTGCCCTGACCACGCAACTCCAAAACAT GGCTCTTGTTAGTAACACGAGCTCGAAGTCAGCCAAGGGACAAAAGGGGC GGGAGTCCCCGGGAGATACTCCAACGTCTAGCACCCCCAAGGACAAGGAC ACGTCGAAGCCGCACGAGCAGCAGGAGCAACAGGGTACCGCGTCTCCCAC CGTACCGGCACCCGCTGCTGTTATGGCCCAGTCCTCTCCCGACAATGAAA CCAAGAAGAGTCAGGCCATGGACGAGAGCAAGAGCACCCTTAAAGCGATG GATTTACCCGCTGTGGTGGTGGAGGAGGAAGAAGCAGGGAAGGAAGAAAA GGAGATCTCGACTCTCAAGTCAGCGACGATGCAAAGAGATCAGCATGACG CGGCGACAAAAAAAGAAGGAACCAACAGGAGGGAGTTGATGGATAAAAAG GTCCCCGGAGATGAATCGCCTTCCCCGCCGGCGCAACAACCACCCATACA AGCCCAGCAGTGTAAGCAGGAGCAGGAGCATCTGAAAAAGCAGGAGTCTG CCGCTTCAGAACAAGCCTTTCCTGTCGTCGTGGAAAGAGGAGCTACCAAG CAAGCACAGCAGCAGCAGCAGCAGCAAAAACAGAAACATGAAGAAATTGA AATGACTGTGTCGATGAACGCTCCATCCGCCGCAGTCATGGTGCAACAGC CCTGGGAAGCAACGAAACAGAAGCGGCAGAAGCGAAGGAGCCAGGGAAAG CAGGAGTTTGACAATCTGGAACAAATCCCTACTCCTTCCTTGGAAGGAGG GCCTTCTAAGCAAGTACAGCAGCAGCAGCCTAACGCACTTGTGCAGCATC AGCACCATCACCATAACGGGCAGCAACATGAGGAGAAGGGAGGGACCGAA TCGCAGCAGCCCCTTTTGACTGCCGGAGAAAGGCACCCGCCCACACAACA TCAGCAGCCACAGCAACAAGAGAGAGAATCAATTGCAATGCAGTATATCG GCTCTACTGCTGGGCAACGGCAGCAAGAACGACAAGGCAAGGAGCAACAA AATCAGCTGCCACCTGCTCCAGCGCCTTCATCGACCTCCCTCCCTCGCAA CCCTGTCCCCGGCCTCACTATTGCGCTAGCTCATCATCCTTCCGCTCCTT TAGTCGAGCGAGTCCGAACGCATCTTGCAGCACTGGAGCGGAGCGGCACC GTGGTTATGGAGTGTCTGCCTGTCCCTCTGGCCCTTGCCGAGTGGACAAA CACGCACGCCTATGAGCTCAACAATATTCTGACTCAGACTAGGGAGAGAA GTAATGTTCTGTCCATTATTTTGGAGACGCTAGAAGGAGATGCAGTACAG GATGGAGGAAAAAAATCCTCAGGCTCGAAGTCGGGGAAGGTGCTTGTGAT TACAGCCATGTCGACAGAGGAAGCGCATAGGGCCAAGACGTTGCTTGAGT TGCATTTGAAAAACCAACAGGAGCTCCTTAGGACCGAACGACGGTTACAA CAAGTACAGAATAAATTCTTGGTGGTGGAGGAAGAGGTGGCTGCGGGGTT GCGAATAGAGTTTGGGATTCGGAAGGAGTTGGGAAGGGTTGTAGTGGGGA AGAAGGGGGAGCGTGTCAAAAGAGTGTTAGCTGAGACGGGCGTCTCGTCG ATCAACGTTGGAGATGATGGCATGATTCGGGTTGTGGGACCGACAGTCGC GGCGGTGATGAAAGCGAGGGAGCTGCTGGAATTGGTACAAGAGGATGTAC AGGTGCCGCTTGAGGCGGTGGCATGGTTTTCCTGCGCTGTACTTGACAAT TTGAAGAAAAAGTCGGGCTGTGTCATACTACGGACTGATAAGGTTGGTAC TTACGTGCAGCAGCAGCAGCAGCAGGAGGCTTCGGAGAGTCGAAAAGTGA CCGTAGTGCGAATTGTGGGCACGCATAAGCAAGTGGAAATTGCCCGCCTT CTTGTAGACACCCAGATTGAGTACGGGGGCCGGCACCAGGCCTTACGCTC TTCCAAGGAGCAGATGCTGCAGATGTTAAACCATGCTGGCGCCTCTTACA GCAACAAAAGTGGTTCCCGACGCCTCCAGCTAGAGCAGCAGAAACTCCGC CCCCAGCAGCAGCCACGGTTTCAAACCGATGCTCTCTTGCACGCTGGTAG TGGAAAGGGCCGTAGTATTGCGCATAGAGGTGGCGGTGGAGAGAAAGCGG CCGAGACTCTGGGAGTGCGACCGCAGAAACAGCAGCAGCAGCAGCAGCAA CGTAAGCCGTTGTCGGCGTTTGAAGCAGCGAGCGTCCAGGAAAGCAGCAG CAGCGACATGCTCCCAAGCGCGTCGAGGACCAGGGGCCGTGGCAAGGCTG CCCGCATCAGCAGTAAAAATGGCGGCGCCAGTGGCGATGATGCTACAAGC GCAAGCGCTGCAATGGCACCGTCGCTGCCTGCAAAAAACGAGGACAACCG CACCAAATAA back to top
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