NO10G00930.1, NO10G00930.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G00930.1
Unique NameNO10G00930.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1056
Alignment locationchr10:291186..292241 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:291186..292241 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G00930.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G00930NO10G00930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G00930.1NO10G00930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G00930.1.cds1NO10G00930.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G00930.1 ID=NO10G00930.1|Name=NO10G00930.1|organism=Nannochloropsis oceanica|type=mRNA|length=1056bp
ATGATGAGCGGCGCCTCCTACTACCAACAGCAGCAGCAGCAGCAGCAGCA
GCAGCACGTTGACCCGCAGCACGCTCTCCCCCACCAGCAGCCGCGGCAGC
CGCAGCCGCAGCAACACCATCAACAACAACACCAGCCACCACCACCACAA
CTACATGAGCTATCACCAGCTCGAGCACCAGCAGCAGCAGCACTAGCCCC
GACAGTAGCAGCAGGAAAACCAGGTCGCGCCGGCCTTTGGACGCCTCACC
AAACAGCAGAAGGCACTCTCTACTACTTCAATGCAGTAGGCGGGTACAGC
GTTTGGGAAAAACCACCTGGCGCCATAGAACCTCGTTTTCCTCTTCCCGT
ACCTCAACCGTTTCCTCCTCTCCCGCAGCAGCAGCACCAGCAGCAGAATG
AAAAAGAGGAGCACGCGAACGACTCTGCACAAATTCTCTTTGGTCACAAT
GGTGCACAAGTGCAACAACAGCAGCAGCCACACCACCACAACTATCAGCA
GCAGCAGCCGCAGGAACAACACCAGTATTGCAATCCGGAGCCCCCCAACT
TATCAGAGCAGCACCAGCAGCAACAACAGCAGCAACAACGCCCAACTCCA
GCATTCACTTACATGCACCAAGAAACAGTCTCTCTGCCCACTTTTGTGGC
CCAAGACCCAAAGCACCGAGATTACATGCTTTTACAACAACAAGAACAAC
AACAAGAACAACAACAAGAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAA
TCGCAGGAGCAGGAGCAGCAGCAGCAGCAGCAGCGAACGTCCAAGTGGCA
ACCATCACTATCACGACAAAATGCCATTGCTGGTGCCCCGCCCGTAATGA
AGAAATCTCGCTTCGCCATCGCCAATAGCAGTAGCAGCAGCAGCAGTAGT
AGTAGTAGTAGTGGTAGGAATGCATATCTTGATCAGGTTAGAGAGCTGCA
AGGTCGCAGCAAGGATCCAGAAGGCACGAGTGAAGGTGGGAAGTGGCTCG
TGCGATGAGCGAAAGATAAAAGAAAGAGCGAGAAAAGAAAGAATCTGTGT
TTTGAT
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protein sequence of NO10G00930.1

>NO10G00930.1-protein ID=NO10G00930.1-protein|Name=NO10G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=336bp
MMSGASYYQQQQQQQQQQHVDPQHALPHQQPRQPQPQQHHQQQHQPPPPQ
LHELSPARAPAAAALAPTVAAGKPGRAGLWTPHQTAEGTLYYFNAVGGYS
VWEKPPGAIEPRFPLPVPQPFPPLPQQQHQQQNEKEEHANDSAQILFGHN
GAQVQQQQQPHHHNYQQQQPQEQHQYCNPEPPNLSEQHQQQQQQQQRPTP
AFTYMHQETVSLPTFVAQDPKHRDYMLLQQQEQQQEQQQEQQQQQQQQQQ
SQEQEQQQQQQRTSKWQPSLSRQNAIAGAPPVMKKSRFAIANSSSSSSSS
SSSSGRNAYLDQVRELQGRSKDPEGTSEGGKWLVR*
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mRNA from alignment at chr10:291186..292241-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G00930.1 ID=NO10G00930.1|Name=NO10G00930.1|organism=Nannochloropsis oceanica|type=mRNA|length=1056bp|location=Sequence derived from alignment at chr10:291186..292241- (Nannochloropsis oceanica)
ATGATGAGCGGCGCCTCCTACTACCAACAGCAGCAGCAGCAGCAGCAGCA
GCAGCACGTTGACCCGCAGCACGCTCTCCCCCACCAGCAGCCGCGGCAGC
CGCAGCCGCAGCAACACCATCAACAACAACACCAGCCACCACCACCACAA
CTACATGAGCTATCACCAGCTCGAGCACCAGCAGCAGCAGCACTAGCCCC
GACAGTAGCAGCAGGAAAACCAGGTCGCGCCGGCCTTTGGACGCCTCACC
AAACAGCAGAAGGCACTCTCTACTACTTCAATGCAGTAGGCGGGTACAGC
GTTTGGGAAAAACCACCTGGCGCCATAGAACCTCGTTTTCCTCTTCCCGT
ACCTCAACCGTTTCCTCCTCTCCCGCAGCAGCAGCACCAGCAGCAGAATG
AAAAAGAGGAGCACGCGAACGACTCTGCACAAATTCTCTTTGGTCACAAT
GGTGCACAAGTGCAACAACAGCAGCAGCCACACCACCACAACTATCAGCA
GCAGCAGCCGCAGGAACAACACCAGTATTGCAATCCGGAGCCCCCCAACT
TATCAGAGCAGCACCAGCAGCAACAACAGCAGCAACAACGCCCAACTCCA
GCATTCACTTACATGCACCAAGAAACAGTCTCTCTGCCCACTTTTGTGGC
CCAAGACCCAAAGCACCGAGATTACATGCTTTTACAACAACAAGAACAAC
AACAAGAACAACAACAAGAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAA
TCGCAGGAGCAGGAGCAGCAGCAGCAGCAGCAGCGAACGTCCAAGTGGCA
ACCATCACTATCACGACAAAATGCCATTGCTGGTGCCCCGCCCGTAATGA
AGAAATCTCGCTTCGCCATCGCCAATAGCAGTAGCAGCAGCAGCAGTAGT
AGTAGTAGTAGTGGTAGGAATGCATATCTTGATCAGGTTAGAGAGCTGCA
AGGTCGCAGCAAGGATCCAGAAGGCACGAGTGAAGGTGGGAAGTGGCTCG
TGCGATGAGCGAAAGATAAAAGAAAGAGCGAGAAAAGAAAGAATCTGTGT
TTTGAT
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Coding sequence (CDS) from alignment at chr10:291186..292241-

>NO10G00930.1 ID=NO10G00930.1|Name=NO10G00930.1|organism=Nannochloropsis oceanica|type=CDS|length=1008bp|location=Sequence derived from alignment at chr10:291186..292241- (Nannochloropsis oceanica)
ATGATGAGCGGCGCCTCCTACTACCAACAGCAGCAGCAGCAGCAGCAGCA
GCAGCACGTTGACCCGCAGCACGCTCTCCCCCACCAGCAGCCGCGGCAGC
CGCAGCCGCAGCAACACCATCAACAACAACACCAGCCACCACCACCACAA
CTACATGAGCTATCACCAGCTCGAGCACCAGCAGCAGCAGCACTAGCCCC
GACAGTAGCAGCAGGAAAACCAGGTCGCGCCGGCCTTTGGACGCCTCACC
AAACAGCAGAAGGCACTCTCTACTACTTCAATGCAGTAGGCGGGTACAGC
GTTTGGGAAAAACCACCTGGCGCCATAGAACCTCGTTTTCCTCTTCCCGT
ACCTCAACCGTTTCCTCCTCTCCCGCAGCAGCAGCACCAGCAGCAGAATG
AAAAAGAGGAGCACGCGAACGACTCTGCACAAATTCTCTTTGGTCACAAT
GGTGCACAAGTGCAACAACAGCAGCAGCCACACCACCACAACTATCAGCA
GCAGCAGCCGCAGGAACAACACCAGTATTGCAATCCGGAGCCCCCCAACT
TATCAGAGCAGCACCAGCAGCAACAACAGCAGCAACAACGCCCAACTCCA
GCATTCACTTACATGCACCAAGAAACAGTCTCTCTGCCCACTTTTGTGGC
CCAAGACCCAAAGCACCGAGATTACATGCTTTTACAACAACAAGAACAAC
AACAAGAACAACAACAAGAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAA
TCGCAGGAGCAGGAGCAGCAGCAGCAGCAGCAGCGAACGTCCAAGTGGCA
ACCATCACTATCACGACAAAATGCCATTGCTGGTGCCCCGCCCGTAATGA
AGAAATCTCGCTTCGCCATCGCCAATAGCAGTAGCAGCAGCAGCAGTAGT
AGTAGTAGTAGTGGTAGGAATGCATATCTTGATCAGGTTAGAGAGCTGCA
AGGTCGCAGCAAGGATCCAGAAGGCACGAGTGAAGGTGGGAAGTGGCTCG
TGCGATGA
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Synonyms
Publications