NO10G00490.1, NO10G00490.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G00490.1
Unique Name	NO10G00490.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3162
Alignment location	chr10:172717..177371 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:172717..177371 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G00490.1 vs.
Match: EWM25284.1 (patatin-like serine [Nannochloropsis gaditana])

HSP 1 Score: 578.9 bits (1491), Expect = 2.900e-161
Identity = 290/338 (85.80%), Postives = 313/338 (92.60%), Query Frame = 0

Query:    1 MSSDSGSNPGILAAIDKGVQALLSSLSDGQAAIASMKDFDLHRLGHMLDHVLELLHHNLPEAERLLFSWADTIFAPKVVVRQYLLALGLELGLFVYHLASRLGTRLVNRMTVRGRQISDTRRRMAKAKNYYEWLKCAERMDELEGKNKWREVPECNLYNHRMLQEKINQLNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNYVCDVNPSLDHIGPDVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDELYAMFTDGIARLDFFKLYKRRAAAVAAAAA 339
            M+SD G+ PG+L AIDKGVQ L+SSLS+  A +  ++D D+HRLG+++D +LE LHHNLPEAERLL+SWADTIFAPKVV+RQYL+ALGLE+ LF+YHL  RLG RLVNRMTV+GRQIS+TRRRMAKAKNYYEWLKCAERMDELEGKN+WREVPE  LYNHRMLQEKINQ NNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALN+VCDVNPSLD+I  DVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDELYAMFTDGIARLDFFKLYKRR  A AAA A
Sbjct:   34 MASDRGTGPGVLFAIDKGVQQLISSLSETGARLGRVRDVDIHRLGYLVDRLLESLHHNLPEAERLLYSWADTIFAPKVVLRQYLMALGLEMTLFIYHLCYRLGARLVNRMTVKGRQISETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKINQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERYLEVVVKALNFVCDVNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDELYAMFTDGIARLDFFKLYKRRTKAAAAATA 371

The following BLAST results are available for this feature:

BLAST of NO10G00490.1 vs.

BLAST of NO10G00490.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25284.1	2.900e-161	85.80	patatin-like serine [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G00490	NO10G00490	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G00490.1	NO10G00490.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G00490.1.cds1	NO10G00490.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00490.1.cds2	NO10G00490.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00490.1.cds3	NO10G00490.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00490.1.cds4	NO10G00490.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00490.1.cds5	NO10G00490.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00490.1.cds6	NO10G00490.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00490.1.cds7	NO10G00490.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00490.1.cds8	NO10G00490.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00490.1.cds9	NO10G00490.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:172717..177371+
coding sequence from alignment at chr10:172717..177371+

mRNA sequence

>NO10G00490.1 ID=NO10G00490.1|Name=NO10G00490.1|organism=Nannochloropsis oceanica|type=mRNA|length=3162bp
ATGTCCTCCGACAGCGGCTCCAACCCAGGCATCCTCGCCGCTATCGACAA
AGGCGTGCAGGCCCTTCTCTCCTCCCTGAGTGACGGCCAGGCTGCTATTG
CCAGTATGAAGGATTTTGACTTGCATCGCTTGGGGCATATGCTAGACCAT
GTCTTAGAGCTCCTTCATCACAACCTGCCCGAGGCTGAACGGCTGCTGTT
TTCCTGGGCAGACACCATCTTCGCGCCAAAGGTGGTGGTGAGACAGTATC
TACTTGCCTTAGGCTTAGAGTTGGGCTTATTTGTGTACCATTTGGCCTCC
AGATTGGGGACTAGGCTGGTGAACCGAATGACGGTGCGGGGGAGGCAGAT
CTCGGATACACGGAGAAGGATGGCCAAGGCCAAGAACTACTATGAATGGT
TAAAGTGCGCGGAGCGCATGGATGAGCTGGAGGGAAAGAACAAGTGGAGG
GAGGTCCCTGAGTGTAACCTTTACAATCACCGGATGCTGCAGGAGAAGAT
AAATCAATTGAACAATATGATGCAGAACGGGGACGTGTTCCAGTTGATGT
TTGTATTGAGGGGTGGAATCAGTCGAAACCAGTTTGGCTTGCTCAATGAA
GGATTGTACCAGCACGCATATTCTGGGACCAAGAAAATTGTGGAGCGCTA
TCTCGAGGTGGTCGTCAAAGCTCTAAACTATGTATGCGATGTCAATCCTA
GCTTGGACCACATAGGACCGGATGTCAAACTGGCTTTTTTTAATGAGACC
CGGCACGCGTTTGGGCGCACGGCACTCTTGCTATCGGGAGGAGCGGGACT
AGGGTTCTACCACGTTGGTTTTGTTAAGGCGCTGTTCGATCAGGGTATTC
TTCCCCGTGTTCTGTCGGGTGCTTCTGCCGGTAGTATTATTTCCTCCATG
ATTGGCGTTCGGACCGACGACGAGCTTTATGCCATGTTTACTGACGGGAT
CGCCCGACTTGACTTCTTCAAGTTGTACAAAAGAAGAGCAGCAGCAGTGG
CAGCAGCAGCAGCACAGAAAAAGAGACTGATGGCGGCGAGCATGTCGATG
TCAGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAGGGAAAGTTG
GGGAAGTAGTATTTTGAGGGCGGAACTAGAAAAGGGAGAGGGATCTTCGA
TGTCGTCATCGCAGTTTCCATCGACCGATGGGGGAGAAGGGGGAGACGGA
GGACCGGCAACATTCGAGAGCTCGTTGTATGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGGAGGGGGGGAGGGAGCGTGATGGAGCCGGCGAAGGTTTATT
TTGGAGAGGTATTGAGAGAGCTGTTCATGGAGATGTTTTGGTACGGGGAT
GGGGTGTTCTTGATGGACACGGAGCACTTTAGAAGAAGGCTGTTGAGTAA
TATTGGCAACTATACCTTCCAGGAGGCCTTCGATCGCACAGGGCGTATCC
TCAACATCATCGTCGCGCCTGCCAACAATTCCGACCCTCCCCGGCTGCTG
AATTACCTGACCTCCCCTCACGTACTCGTGTGGTCGGCAGCCGCGGTCTC
CTCCGCCGCTCCGGGTATCTTCGAGCCAGGCTACCTGTACGTCCGGCAAG
CGGATGGATCGGAACGGCCGGAATCGTCTTGCAAATGGTACGACGGCTCG
GTCGAGAAGGACCTGCCCATGGAACAGCTTGCCGAGCTCTTTAACATCAA
TCACTTCCTCGTCTCCCAAGTCAACCCGCAAGCCACGCTCTTCTCCTCCG
TCACCTTGCCTCAGACTATCCTTTCGTCCCCCCTCCTCACGGTCTTCGCC
CACATTATGCAATTCTGCAAAAGGCAGTTCCGGTCCTGGTGTCGAAATTT
CTTCAAGCTCATCGAAGCCAGTCGACGGCAAGGCGCCTGGTCCGTTCGTG
GGATAGGTTTAATGTTCACTCAGGATTACGAGGGCCGCGACTGCGACATC
ACCATTATGCCCTGGGCAGGCCATATAGGGCTGATTGGCGTCTGCTCCCG
CATTCTCTCCAACCCCTCCTTCCAAGAATACCTCGAAATGCTGGCCTACG
GCGAGAGGAAGACATGGCCGCTGCTCCACGCCATCAGGAGTCACTGTGTG
GTCGAGATGTGTCTGGAGAAGTGCGTCCAACGCCTCCGCCGAACCGTCGC
TAAGGAAAGTCAGGCCAAAAAAGCTTCCTCCGCCAGCAACTCCGCCACCT
CCTCGGCTGTACCCTACCGCGCATGCCTCCCTCCCTCCCCCCCTCTACCC
GCCCTTGACGGGGAAGTTTCCCTCCATCGGAGCTTCCCTGTCGGCGATGG
GGGGGGGGAAGCAGGAGGAAATGGAAGGGAGAGTCCGTGCAGCAGTGGGA
TGAACAGGCAGTCGTTGCACTTGCAGCCTGCGCCTGGCCCATCGGAGAGC
GGGGAGGAGGAGGGGGGGGAAGAGGAAGAAGGGGAGGGAGGGGGAGGATT
TTTGAGCAGCGGGGGGGGAGGGATGGGGGGAGGAAGTGGAAGCAACTTCA
ACTTCATCGAGGGATCCGATGATGAGGTGGGACAGCTGTCGCCCCCCCTC
GCTCAATTGCCAACGTCTGCTTCTCATCATCAACAAGGGCAAGAGCCGGG
TACATACTCGTTCTATACTTCGCTCTCCCCCTCTCCCTCCCTCCCTCCGC
CACTACATGTGGCGGTAGCTGCTGGTGTTGCTGGAGGAGGAGGAGGAGGA
AAAGGAGGGGGAGGAGGAGGGGGAGGAGGAGGAGGAGGGGGAGGAGAGGG
GAATGGTGTCAGTCGCAGGTCTGGAGGGCGGATAGCCGCCGATGGAGAGG
AAGGGGGGCCGAAGGAAGGGAGGGAGGAGGAAGAGGGAGATGATGGGGCT
GGGGGGCAGGGATTGGTGAAGAGCACGACCATGGCAAGGTTTTACTACAG
GAAAAGCAAGAGCTCTACGCAGCTGGCGAAGGGAGGGCCGGGCGGGCCGG
TGGCCCAGCCGGGAGATGCGGATGCGGGGGCTACAGATCAGAGTTAGAGG
GTAGTAATAATATTTATAGTGCAATGCCTCCCTCCCTTCCTCCCTCCTTC
GCTTCCCCTTTCTCGCACCTGACTTCCTGTGCTTGGCTGGAAAAAAAAGG
GAGAGAGGGAAGAAAGGAGAAAAACAAGGGAGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGA

protein sequence of NO10G00490.1

>NO10G00490.1-protein ID=NO10G00490.1-protein|Name=NO10G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=999bp
MSSDSGSNPGILAAIDKGVQALLSSLSDGQAAIASMKDFDLHRLGHMLDH
VLELLHHNLPEAERLLFSWADTIFAPKVVVRQYLLALGLELGLFVYHLAS
RLGTRLVNRMTVRGRQISDTRRRMAKAKNYYEWLKCAERMDELEGKNKWR
EVPECNLYNHRMLQEKINQLNNMMQNGDVFQLMFVLRGGISRNQFGLLNE
GLYQHAYSGTKKIVERYLEVVVKALNYVCDVNPSLDHIGPDVKLAFFNET
RHAFGRTALLLSGGAGLGFYHVGFVKALFDQGILPRVLSGASAGSIISSM
IGVRTDDELYAMFTDGIARLDFFKLYKRRAAAVAAAAAQKKRLMAASMSM
SEGGREGGREGGRRESWGSSILRAELEKGEGSSMSSSQFPSTDGGEGGDG
GPATFESSLYGGGGGGGGGGRGGGSVMEPAKVYFGEVLRELFMEMFWYGD
GVFLMDTEHFRRRLLSNIGNYTFQEAFDRTGRILNIIVAPANNSDPPRLL
NYLTSPHVLVWSAAAVSSAAPGIFEPGYLYVRQADGSERPESSCKWYDGS
VEKDLPMEQLAELFNINHFLVSQVNPQATLFSSVTLPQTILSSPLLTVFA
HIMQFCKRQFRSWCRNFFKLIEASRRQGAWSVRGIGLMFTQDYEGRDCDI
TIMPWAGHIGLIGVCSRILSNPSFQEYLEMLAYGERKTWPLLHAIRSHCV
VEMCLEKCVQRLRRTVAKESQAKKASSASNSATSSAVPYRACLPPSPPLP
ALDGEVSLHRSFPVGDGGGEAGGNGRESPCSSGMNRQSLHLQPAPGPSES
GEEEGGEEEEGEGGGGFLSSGGGGMGGGSGSNFNFIEGSDDEVGQLSPPL
AQLPTSASHHQQGQEPGTYSFYTSLSPSPSLPPPLHVAVAAGVAGGGGGG
KGGGGGGGGGGGGGGEGNGVSRRSGGRIAADGEEGGPKEGREEEEGDDGA
GGQGLVKSTTMARFYYRKSKSSTQLAKGGPGGPVAQPGDADAGATDQS*

mRNA from alignment at chr10:172717..177371+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G00490.1 ID=NO10G00490.1|Name=NO10G00490.1|organism=Nannochloropsis oceanica|type=mRNA|length=4655bp|location=Sequence derived from alignment at chr10:172717..177371+ (Nannochloropsis oceanica)
ATGTCCTCCGACAGCGGCTCCAACCCAGGCATCCTCGCCGCTATCGACAA
AGGCGTGCAGGCCCTTCTCTCCTCCCTGAGTGACGGCCAGGCTGCTATTG
CCAGTATGAAGGATTTTGACTTGCATCGCTTGGGGCATATGCTAGACCAT
GTCTTAGAGCTCCTTCATCACAACCTGCCCGAGGCTGAACGGCTGCTGTT
TTCCTGGGCAGACACCATCTTCGCGCCAAAGGTGGTGGTGAGACAGTATC
TACTTGCCTTAGGCTTAGAGTTGGGCTTATTTGTGTACCATTTGGCCTCC
AGATTGGGGACTAGGCTGGTGAACCGAATGACGGTGCGGGGGAGGCAGAT
CTCGGATACACGGAGAAGGATGGCCAAGGCCAAGAACTACTATGAATGGT
TAAAGTGCGCGGAGCGCATGGATGAGCTGGAGGGAAAGAACAAGTGGAGG
GAGGTCCCTGAGTGTAACCTTTACAATCACCGGATGCTGCAGGAGAAGAT
AAATCAATTGAACAATATGATGCAGAACGGGGACGTGTTCCAGTTGATGT
TTGTATTGAGGGGTGGAATCAGTCGAAACCAGTTTGGCTTGCTCAATGAA
GGATTGTACCAGCACGCATATTCTGGGACCAAGAAAATTGTGGAGCGCTA
TCTCGAGGTAAGTCTTAGTCTAATCTACGAGTGTGTGCCTGGGCCAATTA
GATTGCCAGCCAAAGAGGGATTTACCGGGTGTGGGCCCTGCGAGCGCGTC
TCGTCCCGGTGTGTGTAGCATAGTATGTGTTCATACTCTGACGGCCACAT
GCCCGGGCTTTAATCGTTTTCCGCGGACTGCCTCTTTTGTTTGTGCGGCC
GTCTTTATGGCGTTCTTTTTTCACCGCAGGATTCCATCCCCAAAATTGGA
CGGATCAAGCGAAAAATGCCATTTTGTTTTTTTTTTCCTGGGAACTCATA
TCTTTACGATCATTCATACTGACTGCTTCCTTTATTTTCTGAATCACCAG
GTGGTCGTCAAAGCTCTAAACTATGTATGCGATGTCAATCCTAGCTTGGA
CCACATAGGACCGGATGTCAAACTGGCTTTTTTTAATGAGACCCGGCACG
CGTTTGGGCGCACGGCACTCTTGCTATCGGGAGGAGCGGGACTAGGGTTC
TACCACGTTGGTTTTGTTAAGGCGCTGTTCGATCAGGTAAGAGAGCGTCT
TGGGACGGCGGGAGAGATGGAGGGCACTCAGTGATATCTCCATATCAGGT
GGGTGTTTGGTGCTCTTGCTCCGGGGGATCGTGCCATGCTGGTGGAACTT
CAAGGAAGATGTTGACATTTTCATCCTCACACAGCGGGTGCTAGCATGTA
CGCTTTGTGCAAATTCCCTTGTTTAGTTTATCACACACAACTAAGATCTG
ATTGCATTTTCCATCATGACAGGGTATTCTTCCCCGTGTTCTGTCGGGTG
CTTCTGCCGGTAGTATTATTTCCTCCATGATTGGCGTTCGGACCGACGAC
GAGCTTTATGCCATGTTTACTGACGGGATCGCCCGACTTGACTTCTTCAA
GTTGTACAAAAGAAGAGCAGCAGCAGTGGCAGCAGCAGCAGCACAGAAAA
AGAGACTGATGGCGGCGAGCATGTCGATGTCAGAGGGAGGGAGGGAGGGA
GGAAGGGAGGGAGGGAGGAGGGAAAGTTGGGGAAGTAGTATTTTGAGGGC
GGAACTAGAAAAGGGAGAGGGATCTTCGATGTCGTCATCGCAGTTTCCAT
CGACCGATGGGGGAGAAGGGGGAGACGGAGGACCGGCAACATTCGAGAGC
TCGTTGTATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGGGGGGGAGG
GAGCGTGATGGAGCCGGCGAAGGTTTATTTTGGAGAGGTATTGAGAGAGC
TGTTCATGGAGATGTTTTGGTACGGGGATGGGGTGTTCTTGATGGACACG
GAGCACTTTAGAAGAAGGCTGTTGAGTAATATTGGTAAGTATAGGGGAAA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGATTGGGCCAGAATTCG
TTTTATTGGGGGAGACATTCTGAATCCCCCCCCCCCCCTGTCTTCTTCCT
TTCCCCCAGGCAACTATACCTTCCAGGAGGCCTTCGATCGCACAGGGCGT
ATCCTCAACATCATCGTCGCGCCTGCCAACAATTCCGACCCTCCCCGGCT
GCTGAATTACCTGACCTCCCCTCACGTACTCGTGTGGTCGGCAGCCGCGG
TCTCCTCCGCCGCTCCGGGTATCTTCGAGCCAGGTGCGTGCGTATATATC
TTCATATATATATATATGTATATATATGTGTGTGTGTCTGTATGTCTTCG
TGTGTGTATATGTACATATGTATGTGGGAATGTGGAGGATTGTGCGTCCC
CTCCTTCAAAAAAGGGAACAAAATCAACTCCATCCAACCACCAACACCTC
GTCGATTCCTCCTCTCTCTTCTCTCATCCCCCTAAGGCTACCTGTACGTC
CGGCAAGCGGATGGATCGGAACGGCCGGAATCGTCTTGCAAATGGTACGA
CGGCTCGGTCGAGAAGGACCTGCCCATGGAACAGCTTGCCGAGCTCTTTA
ACATCAATCACTTCCTCGTCTCCCAAGTCAACCCGCAAGCCACGCTCTTC
TCCTCCGTCACCTTGCCTCAGACTATCCTTTCGTCCCCCCTCCTCACGGT
CTTCGCCCACATTATGCAATTCTGCAAAAGGCAGTTCCGGTCCTGGTGTC
GAAATTTCTTCAAGCTCATCGAAGCCAGTCGACGGCAAGGTGAACTCTCC
CTCCCGCCCGCCCTCCCTTTCTCCCTCCCTCCTCACCCCTCCTGCCCTTG
TGCCTGACCGACGCAATCAACGTGTGCATGTTTTCCGCCGTCTTATCCTT
GTTCCTCATCCTCTCGTGCATACCGACAATCCCTCTCTCCCTCTCACACA
CATTCATTCCAACAAAACATACACTCTTCCTCCTTCCCTCATTCCCTTCA
TCCCCCGTTCAGGCGCCTGGTCCGTTCGTGGGATAGGTTTAATGTTCACT
CAGGATTACGAGGGCCGCGACTGCGACATCACCATTATGCCCTGGGCAGG
CCATATAGGTAGGGAGGGAGGGAGGAAGGGACGGAGGCAGGGAGGCATGG
CCATGGATGGAGTAATTTATAGAATCCAGAATCCGATGATCGAACCTAAT
CCTCGTAACCCTTTCCCTCCCCCCTCCCTCCCTCCCCCTCCCCAGGGCTG
ATTGGCGTCTGCTCCCGCATTCTCTCCAACCCCTCCTTCCAAGAATACCT
CGAAATGCTGGCCTACGGCGAGAGGAAGACATGGCCGCTGCTCCACGCCA
TCAGGAGTCACTGTGTGGTCGAGATGTGTCTGGAGAAGGTACCTCCCTCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTGTCCTACCCTACAT
GCCCTCCCCACTCACCCACCACCCCCCCTCCTCACTCTTCCCTCCCTCCA
ACCCTGCCAGTGCGTCCAACGCCTCCGCCGAACCGTCGCTAAGGAAAGTC
AGGCCAAAAAAGCTTCCTCCGCCAGCAACTCCGCCACCTCCTCGGCTGTA
GTCCCCAAGAGCCTCGGAGAACGCGGACGAGCGCCCTCTTTCTACACAGT
CCCCTCACTGGCCAATCTATCGGGTCTTTCGGTCACGGACCCTGCGATTC
AAAGCCCTACCGCGCATGCCTCCCTCCCTCCCCCCCTCTACCCGCCCTTG
ACGGGGAAGTTTCCCTCCATCGGAGCTTCCCTGTCGGCGATGGGGGGGGG
GAAGCAGGAGGAAATGGAAGGGAGAGTCCGTGCAGCAGTGGGATGAACAG
GCAGTCGTTGCACTTGCAGCCTGCGCCTGGCCCATCGGAGAGCGGGGAGG
AGGAGGGGGGGGAAGAGGAAGAAGGGGAGGGAGGGGGAGGATTTTTGAGC
AGCGGGGGGGGAGGGATGGGGGGAGGAAGTGGAAGCAACTTCAACTTCAT
CGAGGGATCCGATGATGAGGTGGGACAGCTGTCGCCCCCCCTCGCTCAAT
TGCCAACGTCTGCTTCTCATCATCAACAAGGGCAAGAGCCGGGTACATAC
TCGTTCTATACTTCGCTCTCCCCCTCTCCCTCCCTCCCTCCGCCACTACA
TGTGGCGGTAGCTGCTGGTGTTGCTGGAGGAGGAGGAGGAGGAAAAGGAG
GGGGAGGAGGAGGGGGAGGAGGAGGAGGAGGGGGAGGAGAGGGGAATGGT
GTCAGTCGCAGGTCTGGAGGGCGGATAGCCGCCGATGGAGAGGAAGGGGG
GCCGAAGGAAGGGAGGGAGGAGGAAGAGGGAGATGATGGGGCTGGGGGGC
AGGGATTGGTGAAGAGCACGACCATGGCAAGGTTTTACTACAGGAAAAGC
AAGAGCTCTACGCAGCTGGCGAAGGGAGGGCCGGGCGGGCCGGTGGCCCA
GCCGGGAGATGCGGATGCGGGGGCTACAGATCAGAGTTAGAGGGTAGTAA
TAATATTTATAGTGCAATGCCTCCCTCCCTTCCTCCCTCCTTCGCTTCCC
CTTTCTCGCACCTGACTTCCTGTGCTTGGCTGGAAAAAAAAGGGAGAGAG
GGAAGAAAGGAGAAAAACAAGGGAGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGA

Coding sequence (CDS) from alignment at chr10:172717..177371+

>NO10G00490.1 ID=NO10G00490.1|Name=NO10G00490.1|organism=Nannochloropsis oceanica|type=CDS|length=2997bp|location=Sequence derived from alignment at chr10:172717..177371+ (Nannochloropsis oceanica)
ATGTCCTCCGACAGCGGCTCCAACCCAGGCATCCTCGCCGCTATCGACAA
AGGCGTGCAGGCCCTTCTCTCCTCCCTGAGTGACGGCCAGGCTGCTATTG
CCAGTATGAAGGATTTTGACTTGCATCGCTTGGGGCATATGCTAGACCAT
GTCTTAGAGCTCCTTCATCACAACCTGCCCGAGGCTGAACGGCTGCTGTT
TTCCTGGGCAGACACCATCTTCGCGCCAAAGGTGGTGGTGAGACAGTATC
TACTTGCCTTAGGCTTAGAGTTGGGCTTATTTGTGTACCATTTGGCCTCC
AGATTGGGGACTAGGCTGGTGAACCGAATGACGGTGCGGGGGAGGCAGAT
CTCGGATACACGGAGAAGGATGGCCAAGGCCAAGAACTACTATGAATGGT
TAAAGTGCGCGGAGCGCATGGATGAGCTGGAGGGAAAGAACAAGTGGAGG
GAGGTCCCTGAGTGTAACCTTTACAATCACCGGATGCTGCAGGAGAAGAT
AAATCAATTGAACAATATGATGCAGAACGGGGACGTGTTCCAGTTGATGT
TTGTATTGAGGGGTGGAATCAGTCGAAACCAGTTTGGCTTGCTCAATGAA
GGATTGTACCAGCACGCATATTCTGGGACCAAGAAAATTGTGGAGCGCTA
TCTCGAGGTGGTCGTCAAAGCTCTAAACTATGTATGCGATGTCAATCCTA
GCTTGGACCACATAGGACCGGATGTCAAACTGGCTTTTTTTAATGAGACC
CGGCACGCGTTTGGGCGCACGGCACTCTTGCTATCGGGAGGAGCGGGACT
AGGGTTCTACCACGTTGGTTTTGTTAAGGCGCTGTTCGATCAGGGTATTC
TTCCCCGTGTTCTGTCGGGTGCTTCTGCCGGTAGTATTATTTCCTCCATG
ATTGGCGTTCGGACCGACGACGAGCTTTATGCCATGTTTACTGACGGGAT
CGCCCGACTTGACTTCTTCAAGTTGTACAAAAGAAGAGCAGCAGCAGTGG
CAGCAGCAGCAGCACAGAAAAAGAGACTGATGGCGGCGAGCATGTCGATG
TCAGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAGGGAAAGTTG
GGGAAGTAGTATTTTGAGGGCGGAACTAGAAAAGGGAGAGGGATCTTCGA
TGTCGTCATCGCAGTTTCCATCGACCGATGGGGGAGAAGGGGGAGACGGA
GGACCGGCAACATTCGAGAGCTCGTTGTATGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGGAGGGGGGGAGGGAGCGTGATGGAGCCGGCGAAGGTTTATT
TTGGAGAGGTATTGAGAGAGCTGTTCATGGAGATGTTTTGGTACGGGGAT
GGGGTGTTCTTGATGGACACGGAGCACTTTAGAAGAAGGCTGTTGAGTAA
TATTGGCAACTATACCTTCCAGGAGGCCTTCGATCGCACAGGGCGTATCC
TCAACATCATCGTCGCGCCTGCCAACAATTCCGACCCTCCCCGGCTGCTG
AATTACCTGACCTCCCCTCACGTACTCGTGTGGTCGGCAGCCGCGGTCTC
CTCCGCCGCTCCGGGTATCTTCGAGCCAGGCTACCTGTACGTCCGGCAAG
CGGATGGATCGGAACGGCCGGAATCGTCTTGCAAATGGTACGACGGCTCG
GTCGAGAAGGACCTGCCCATGGAACAGCTTGCCGAGCTCTTTAACATCAA
TCACTTCCTCGTCTCCCAAGTCAACCCGCAAGCCACGCTCTTCTCCTCCG
TCACCTTGCCTCAGACTATCCTTTCGTCCCCCCTCCTCACGGTCTTCGCC
CACATTATGCAATTCTGCAAAAGGCAGTTCCGGTCCTGGTGTCGAAATTT
CTTCAAGCTCATCGAAGCCAGTCGACGGCAAGGCGCCTGGTCCGTTCGTG
GGATAGGTTTAATGTTCACTCAGGATTACGAGGGCCGCGACTGCGACATC
ACCATTATGCCCTGGGCAGGCCATATAGGGCTGATTGGCGTCTGCTCCCG
CATTCTCTCCAACCCCTCCTTCCAAGAATACCTCGAAATGCTGGCCTACG
GCGAGAGGAAGACATGGCCGCTGCTCCACGCCATCAGGAGTCACTGTGTG
GTCGAGATGTGTCTGGAGAAGTGCGTCCAACGCCTCCGCCGAACCGTCGC
TAAGGAAAGTCAGGCCAAAAAAGCTTCCTCCGCCAGCAACTCCGCCACCT
CCTCGGCTGTACCCTACCGCGCATGCCTCCCTCCCTCCCCCCCTCTACCC
GCCCTTGACGGGGAAGTTTCCCTCCATCGGAGCTTCCCTGTCGGCGATGG
GGGGGGGGAAGCAGGAGGAAATGGAAGGGAGAGTCCGTGCAGCAGTGGGA
TGAACAGGCAGTCGTTGCACTTGCAGCCTGCGCCTGGCCCATCGGAGAGC
GGGGAGGAGGAGGGGGGGGAAGAGGAAGAAGGGGAGGGAGGGGGAGGATT
TTTGAGCAGCGGGGGGGGAGGGATGGGGGGAGGAAGTGGAAGCAACTTCA
ACTTCATCGAGGGATCCGATGATGAGGTGGGACAGCTGTCGCCCCCCCTC
GCTCAATTGCCAACGTCTGCTTCTCATCATCAACAAGGGCAAGAGCCGGG
TACATACTCGTTCTATACTTCGCTCTCCCCCTCTCCCTCCCTCCCTCCGC
CACTACATGTGGCGGTAGCTGCTGGTGTTGCTGGAGGAGGAGGAGGAGGA
AAAGGAGGGGGAGGAGGAGGGGGAGGAGGAGGAGGAGGGGGAGGAGAGGG
GAATGGTGTCAGTCGCAGGTCTGGAGGGCGGATAGCCGCCGATGGAGAGG
AAGGGGGGCCGAAGGAAGGGAGGGAGGAGGAAGAGGGAGATGATGGGGCT
GGGGGGCAGGGATTGGTGAAGAGCACGACCATGGCAAGGTTTTACTACAG
GAAAAGCAAGAGCTCTACGCAGCTGGCGAAGGGAGGGCCGGGCGGGCCGG
TGGCCCAGCCGGGAGATGCGGATGCGGGGGCTACAGATCAGAGTTAG

Synonyms

Publications