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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr10 | genome | chr10:100291..102160 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO10G00290.1 ID=NO10G00290.1|Name=NO10G00290.1|organism=Nannochloropsis oceanica|type=mRNA|length=1086bp ATGCCTCCTAGGGCCCGATATGGAGAGAGGGGGGAAGGAGAAGGAGGAGC AGGAGAAGGAGGAGGGGGAGATGAGCGACTGGGGAGACAAGGAAAGACAG GAGGTGGAGAGGGTAGTCATAAACCGAAGAGGAAGACATGGGACTTGGCG TCGGAAGTGAGTGAGAAGATGAAGAGGTGTCGGATTACCATGTCCCCGGG GGAGCTGCGTCTAAGGAAGGATCTCGAGGACCTCAAAGAACTTGTCGAGC CGGACCGCGCCCGTCCTTCCCCTTCATCCTCCTTCCCTTCCTCCCCCTCC TCCTTCCTCCCTTCCTCTCTCCATCCCTTCTCGGGAGAAAGAGAGAGAAT CCAGATAGTACGGACCACCGACCCTCTCACCCTCCACGTCTATTTCTTCT CCCCTTCTCCCCCCCCGCCCTCCCTCGCTGCCGCCTTCCCCTCCTCCCTC TCGACCTCGCCCTCCCGCCTCCTCCTCTCTGGCCGGCACCACAGCAGCGT CACTGCCCCCCTTCCTCCCCTCCCTCCTCGCCTCCTTGACCTCGCTGCGG CTGCGGCTGCTCCTGCTGCTTCTTCTTGCCCCGGTCCCTCCGCCTTCATC GTCAAAATTCCTCGCTTCTATCCACATCACCCTCCACTCGTCAGCGTCCT CCCCTCCTCCTCCCCCTTCGTCCCTCCCTCCTCCCCCCTCGTCCACCGTG ACGGACAAGGGCAGGTGCTGCACCCTCTGTTTGGGACGGGATGGAGCGGT GTATATTCCTTTAAAGACGTGATAGAGGCCCTGCGGGACGTCAGGGAAGG CAGAGGCGCTCGTCAGGTTCCCTTATCGTCCTCCGTAACTCCTCCTTCCC CTTCCTCCTCTCCTTCCTCCTCTCCTTCCTCCTCCCCTTCCCCCTCTCCT TCCTGCGTCCAGATGATGACGAACCACTCGCCCTGCAGCAGCAGGGGCTG GGAGGAAGGGAGGGAGGGAGGGGTGGCGGGAGGGAGAAGGAGGAATGTGG GGGTGGACGCGGCAAATGGATTGTTGGTTTGGAATGAGGAGGAGGACAGA GACGAGGAAAAGGGAGACGGAATGAATGTGTGTTAG back to topprotein sequence of NO10G00290.1 >NO10G00290.1-protein ID=NO10G00290.1-protein|Name=NO10G00290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=362bp MPPRARYGERGEGEGGAGEGGGGDERLGRQGKTGGGEGSHKPKRKTWDLA SEVSEKMKRCRITMSPGELRLRKDLEDLKELVEPDRARPSPSSSFPSSPS SFLPSSLHPFSGERERIQIVRTTDPLTLHVYFFSPSPPPPSLAAAFPSSL STSPSRLLLSGRHHSSVTAPLPPLPPRLLDLAAAAAAPAASSCPGPSAFI VKIPRFYPHHPPLVSVLPSSSPFVPPSSPLVHRDGQGQVLHPLFGTGWSG VYSFKDVIEALRDVREGRGARQVPLSSSVTPPSPSSSPSSSPSSSPSPSP SCVQMMTNHSPCSSRGWEEGREGGVAGGRRRNVGVDAANGLLVWNEEEDR DEEKGDGMNVC* back to topmRNA from alignment at chr10:100291..102160+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO10G00290.1 ID=NO10G00290.1|Name=NO10G00290.1|organism=Nannochloropsis oceanica|type=mRNA|length=1870bp|location=Sequence derived from alignment at chr10:100291..102160+ (Nannochloropsis oceanica) ATGCCTCCTAGGGCCCGATATGGAGAGAGGGGGGAAGGAGAAGGAGGAGC
AGGAGAAGGAGGAGGGGGAGATGAGCGACTGGGGAGACAAGGAAAGACAG
GAGGTGGAGAGGGTAGTCATAAACCGAAGAGGAAGACATGGGACTTGGCG
TCGGAAGTGAGTGAGAAGATGAAGAGGTGTCGGATTACCATGTCCCCGGG
GGAGCTGCGTCTAAGGAAGGTGAGAGGGAGGGAGGGAGGGAGAGAAGGAA
GGTTGAGAGTGCATGTGGGAGGTCATCCATGAGTTCGAGGCATCGTTAGA
GGGAGGGAAGGAGGTAGGGAACAACCTGAATCTTGTAAAACCCCGAAAGC
GCTTCAACAAGAAGGACGGGCTAGAGCCCCCCCACCCATCCACCTTGTTC
CTGCTGCCCGTCAGCAGGAGGAGAGCGCGAGAGCAGCCTTTCTTTCTTCC
ACGAAGAATGCGGAGGAGGAGGCCTAGGAGCTGAGACTGATGGACACACG
CTGTTCAATTGAGGTCTCAGTTTTCGGAGCGTCCTACAACTCCTCCCTCT
TACCCTCCCTCCCTCTTACCCTCCCTCCCTCCCTTTACCCATATACACAA
CTCAAACTTTGCTCACAGCCTCCCTCCCTCTCTCCCTCCTTTCCTCCCCA
GGATCTCGAGGACCTCAAAGAACTTGTCGAGCCGGACCGCGCCCGTCCTT
CCCCTTCATCCTCCTTCCCTTCCTCCCCCTCCTCCTTCCTCCCTTCCTCT
CTCCATCCCTTCTCGGGAGAAAGAGAGAGAATCCAGATAGTACGGACCAC
CGACCCTCTCACCCTCCACGTCTATTTCTTCTCCCCTTCTCCCCCCCCGC
CCTCCCTCGCTGCCGCCTTCCCCTCCTCCCTCTCGACCTCGCCCTCCCGC
CTCCTCCTCTCTGGCCGGCACCACAGCAGCGTCACTGCCCCCCTTCCTCC
CCTCCCTCCTCGCCTCCTTGACCTCGCTGCGGCTGCGGCTGCTCCTGCTG
CTTCTTCTTGCCCCGGTCCCTCCGCCTTCATCGTCAAAATTCCTCGCTTC
TATCCACATCACGTAAAAAAGGAGGGGGGAGGGTTGCAGGGAGGAAGAGA
GGAAGGGAGGGAGGGATACAGAGGTTGAAAACACACTCAACTCCTCCCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCTTCCCTT
CCTCCTAAATTTTATAGCCTCCACTCGTCAGCGTCCTCCCCTCCTCCTCC
CCCTTCGTCCCTCCCTCCTCCCCCCTCGTCCACCGTGACGGACAAGGGCA
GGTGCTGCACCCTCTGTTTGGGACGGGATGGAGCGGTGTATATTCCTTTA
AAGACGTGATAGAGGCCCTGCGGGACGTCAGGGAAGGCAGAGGCGCTCGT
CAGGTAGAAAAAGCCCCCCTCCCCCTCCTCGTCCTCCTCCCCCTTCTCCT
CCTCATCCTGTTCCTCCTCCTCTTCACCTGTTGCTCCGTCGATTTTCCAC
TTTCCTTCTATCGTTCCAATAAGAGCAGGCAGCCCACTTACTAAACCCCT
CCTTTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCTCTGTCAG
GTTCCCTTATCGTCCTCCGTAACTCCTCCTTCCCCTTCCTCCTCTCCTTC
CTCCTCTCCTTCCTCCTCCCCTTCCCCCTCTCCTTCCTGCGTCCAGATGA
TGACGAACCACTCGCCCTGCAGCAGCAGGGGCTGGGAGGAAGGGAGGGAG
GGAGGGGTGGCGGGAGGGAGAAGGAGGAATGTGGGGGTGGACGCGGCAAA
TGGATTGTTGGTTTGGAATGAGGAGGAGGACAGAGACGAGGAAAAGGGAG
ACGGAATGAATGTGTGTTAG back to topCoding sequence (CDS) from alignment at chr10:100291..102160+ >NO10G00290.1 ID=NO10G00290.1|Name=NO10G00290.1|organism=Nannochloropsis oceanica|type=CDS|length=1086bp|location=Sequence derived from alignment at chr10:100291..102160+ (Nannochloropsis oceanica) ATGCCTCCTAGGGCCCGATATGGAGAGAGGGGGGAAGGAGAAGGAGGAGC AGGAGAAGGAGGAGGGGGAGATGAGCGACTGGGGAGACAAGGAAAGACAG GAGGTGGAGAGGGTAGTCATAAACCGAAGAGGAAGACATGGGACTTGGCG TCGGAAGTGAGTGAGAAGATGAAGAGGTGTCGGATTACCATGTCCCCGGG GGAGCTGCGTCTAAGGAAGGATCTCGAGGACCTCAAAGAACTTGTCGAGC CGGACCGCGCCCGTCCTTCCCCTTCATCCTCCTTCCCTTCCTCCCCCTCC TCCTTCCTCCCTTCCTCTCTCCATCCCTTCTCGGGAGAAAGAGAGAGAAT CCAGATAGTACGGACCACCGACCCTCTCACCCTCCACGTCTATTTCTTCT CCCCTTCTCCCCCCCCGCCCTCCCTCGCTGCCGCCTTCCCCTCCTCCCTC TCGACCTCGCCCTCCCGCCTCCTCCTCTCTGGCCGGCACCACAGCAGCGT CACTGCCCCCCTTCCTCCCCTCCCTCCTCGCCTCCTTGACCTCGCTGCGG CTGCGGCTGCTCCTGCTGCTTCTTCTTGCCCCGGTCCCTCCGCCTTCATC GTCAAAATTCCTCGCTTCTATCCACATCACCCTCCACTCGTCAGCGTCCT CCCCTCCTCCTCCCCCTTCGTCCCTCCCTCCTCCCCCCTCGTCCACCGTG ACGGACAAGGGCAGGTGCTGCACCCTCTGTTTGGGACGGGATGGAGCGGT GTATATTCCTTTAAAGACGTGATAGAGGCCCTGCGGGACGTCAGGGAAGG CAGAGGCGCTCGTCAGGTTCCCTTATCGTCCTCCGTAACTCCTCCTTCCC CTTCCTCCTCTCCTTCCTCCTCTCCTTCCTCCTCCCCTTCCCCCTCTCCT TCCTGCGTCCAGATGATGACGAACCACTCGCCCTGCAGCAGCAGGGGCTG GGAGGAAGGGAGGGAGGGAGGGGTGGCGGGAGGGAGAAGGAGGAATGTGG GGGTGGACGCGGCAAATGGATTGTTGGTTTGGAATGAGGAGGAGGACAGA GACGAGGAAAAGGGAGACGGAATGAATGTGTGTTAG back to top
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