NO10G00290.1, NO10G00290.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G00290.1
Unique NameNO10G00290.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1086
Alignment locationchr10:100291..102160 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:100291..102160 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G00290.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G00290NO10G00290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G00290.1NO10G00290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G00290.1.cds1NO10G00290.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00290.1.cds2NO10G00290.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00290.1.cds3NO10G00290.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00290.1.cds4NO10G00290.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G00290.1 ID=NO10G00290.1|Name=NO10G00290.1|organism=Nannochloropsis oceanica|type=mRNA|length=1086bp
ATGCCTCCTAGGGCCCGATATGGAGAGAGGGGGGAAGGAGAAGGAGGAGC
AGGAGAAGGAGGAGGGGGAGATGAGCGACTGGGGAGACAAGGAAAGACAG
GAGGTGGAGAGGGTAGTCATAAACCGAAGAGGAAGACATGGGACTTGGCG
TCGGAAGTGAGTGAGAAGATGAAGAGGTGTCGGATTACCATGTCCCCGGG
GGAGCTGCGTCTAAGGAAGGATCTCGAGGACCTCAAAGAACTTGTCGAGC
CGGACCGCGCCCGTCCTTCCCCTTCATCCTCCTTCCCTTCCTCCCCCTCC
TCCTTCCTCCCTTCCTCTCTCCATCCCTTCTCGGGAGAAAGAGAGAGAAT
CCAGATAGTACGGACCACCGACCCTCTCACCCTCCACGTCTATTTCTTCT
CCCCTTCTCCCCCCCCGCCCTCCCTCGCTGCCGCCTTCCCCTCCTCCCTC
TCGACCTCGCCCTCCCGCCTCCTCCTCTCTGGCCGGCACCACAGCAGCGT
CACTGCCCCCCTTCCTCCCCTCCCTCCTCGCCTCCTTGACCTCGCTGCGG
CTGCGGCTGCTCCTGCTGCTTCTTCTTGCCCCGGTCCCTCCGCCTTCATC
GTCAAAATTCCTCGCTTCTATCCACATCACCCTCCACTCGTCAGCGTCCT
CCCCTCCTCCTCCCCCTTCGTCCCTCCCTCCTCCCCCCTCGTCCACCGTG
ACGGACAAGGGCAGGTGCTGCACCCTCTGTTTGGGACGGGATGGAGCGGT
GTATATTCCTTTAAAGACGTGATAGAGGCCCTGCGGGACGTCAGGGAAGG
CAGAGGCGCTCGTCAGGTTCCCTTATCGTCCTCCGTAACTCCTCCTTCCC
CTTCCTCCTCTCCTTCCTCCTCTCCTTCCTCCTCCCCTTCCCCCTCTCCT
TCCTGCGTCCAGATGATGACGAACCACTCGCCCTGCAGCAGCAGGGGCTG
GGAGGAAGGGAGGGAGGGAGGGGTGGCGGGAGGGAGAAGGAGGAATGTGG
GGGTGGACGCGGCAAATGGATTGTTGGTTTGGAATGAGGAGGAGGACAGA
GACGAGGAAAAGGGAGACGGAATGAATGTGTGTTAG
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protein sequence of NO10G00290.1

>NO10G00290.1-protein ID=NO10G00290.1-protein|Name=NO10G00290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=362bp
MPPRARYGERGEGEGGAGEGGGGDERLGRQGKTGGGEGSHKPKRKTWDLA
SEVSEKMKRCRITMSPGELRLRKDLEDLKELVEPDRARPSPSSSFPSSPS
SFLPSSLHPFSGERERIQIVRTTDPLTLHVYFFSPSPPPPSLAAAFPSSL
STSPSRLLLSGRHHSSVTAPLPPLPPRLLDLAAAAAAPAASSCPGPSAFI
VKIPRFYPHHPPLVSVLPSSSPFVPPSSPLVHRDGQGQVLHPLFGTGWSG
VYSFKDVIEALRDVREGRGARQVPLSSSVTPPSPSSSPSSSPSSSPSPSP
SCVQMMTNHSPCSSRGWEEGREGGVAGGRRRNVGVDAANGLLVWNEEEDR
DEEKGDGMNVC*
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mRNA from alignment at chr10:100291..102160+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G00290.1 ID=NO10G00290.1|Name=NO10G00290.1|organism=Nannochloropsis oceanica|type=mRNA|length=1870bp|location=Sequence derived from alignment at chr10:100291..102160+ (Nannochloropsis oceanica)
ATGCCTCCTAGGGCCCGATATGGAGAGAGGGGGGAAGGAGAAGGAGGAGC AGGAGAAGGAGGAGGGGGAGATGAGCGACTGGGGAGACAAGGAAAGACAG GAGGTGGAGAGGGTAGTCATAAACCGAAGAGGAAGACATGGGACTTGGCG TCGGAAGTGAGTGAGAAGATGAAGAGGTGTCGGATTACCATGTCCCCGGG GGAGCTGCGTCTAAGGAAGGTGAGAGGGAGGGAGGGAGGGAGAGAAGGAA GGTTGAGAGTGCATGTGGGAGGTCATCCATGAGTTCGAGGCATCGTTAGA GGGAGGGAAGGAGGTAGGGAACAACCTGAATCTTGTAAAACCCCGAAAGC GCTTCAACAAGAAGGACGGGCTAGAGCCCCCCCACCCATCCACCTTGTTC CTGCTGCCCGTCAGCAGGAGGAGAGCGCGAGAGCAGCCTTTCTTTCTTCC ACGAAGAATGCGGAGGAGGAGGCCTAGGAGCTGAGACTGATGGACACACG CTGTTCAATTGAGGTCTCAGTTTTCGGAGCGTCCTACAACTCCTCCCTCT TACCCTCCCTCCCTCTTACCCTCCCTCCCTCCCTTTACCCATATACACAA CTCAAACTTTGCTCACAGCCTCCCTCCCTCTCTCCCTCCTTTCCTCCCCA GGATCTCGAGGACCTCAAAGAACTTGTCGAGCCGGACCGCGCCCGTCCTT CCCCTTCATCCTCCTTCCCTTCCTCCCCCTCCTCCTTCCTCCCTTCCTCT CTCCATCCCTTCTCGGGAGAAAGAGAGAGAATCCAGATAGTACGGACCAC CGACCCTCTCACCCTCCACGTCTATTTCTTCTCCCCTTCTCCCCCCCCGC CCTCCCTCGCTGCCGCCTTCCCCTCCTCCCTCTCGACCTCGCCCTCCCGC CTCCTCCTCTCTGGCCGGCACCACAGCAGCGTCACTGCCCCCCTTCCTCC CCTCCCTCCTCGCCTCCTTGACCTCGCTGCGGCTGCGGCTGCTCCTGCTG CTTCTTCTTGCCCCGGTCCCTCCGCCTTCATCGTCAAAATTCCTCGCTTC TATCCACATCACGTAAAAAAGGAGGGGGGAGGGTTGCAGGGAGGAAGAGA GGAAGGGAGGGAGGGATACAGAGGTTGAAAACACACTCAACTCCTCCCCC TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCTTCCCTT CCTCCTAAATTTTATAGCCTCCACTCGTCAGCGTCCTCCCCTCCTCCTCC CCCTTCGTCCCTCCCTCCTCCCCCCTCGTCCACCGTGACGGACAAGGGCA GGTGCTGCACCCTCTGTTTGGGACGGGATGGAGCGGTGTATATTCCTTTA AAGACGTGATAGAGGCCCTGCGGGACGTCAGGGAAGGCAGAGGCGCTCGT CAGGTAGAAAAAGCCCCCCTCCCCCTCCTCGTCCTCCTCCCCCTTCTCCT CCTCATCCTGTTCCTCCTCCTCTTCACCTGTTGCTCCGTCGATTTTCCAC TTTCCTTCTATCGTTCCAATAAGAGCAGGCAGCCCACTTACTAAACCCCT CCTTTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCTCTGTCAG GTTCCCTTATCGTCCTCCGTAACTCCTCCTTCCCCTTCCTCCTCTCCTTC CTCCTCTCCTTCCTCCTCCCCTTCCCCCTCTCCTTCCTGCGTCCAGATGA TGACGAACCACTCGCCCTGCAGCAGCAGGGGCTGGGAGGAAGGGAGGGAG GGAGGGGTGGCGGGAGGGAGAAGGAGGAATGTGGGGGTGGACGCGGCAAA TGGATTGTTGGTTTGGAATGAGGAGGAGGACAGAGACGAGGAAAAGGGAG ACGGAATGAATGTGTGTTAG
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Coding sequence (CDS) from alignment at chr10:100291..102160+

>NO10G00290.1 ID=NO10G00290.1|Name=NO10G00290.1|organism=Nannochloropsis oceanica|type=CDS|length=1086bp|location=Sequence derived from alignment at chr10:100291..102160+ (Nannochloropsis oceanica)
ATGCCTCCTAGGGCCCGATATGGAGAGAGGGGGGAAGGAGAAGGAGGAGC
AGGAGAAGGAGGAGGGGGAGATGAGCGACTGGGGAGACAAGGAAAGACAG
GAGGTGGAGAGGGTAGTCATAAACCGAAGAGGAAGACATGGGACTTGGCG
TCGGAAGTGAGTGAGAAGATGAAGAGGTGTCGGATTACCATGTCCCCGGG
GGAGCTGCGTCTAAGGAAGGATCTCGAGGACCTCAAAGAACTTGTCGAGC
CGGACCGCGCCCGTCCTTCCCCTTCATCCTCCTTCCCTTCCTCCCCCTCC
TCCTTCCTCCCTTCCTCTCTCCATCCCTTCTCGGGAGAAAGAGAGAGAAT
CCAGATAGTACGGACCACCGACCCTCTCACCCTCCACGTCTATTTCTTCT
CCCCTTCTCCCCCCCCGCCCTCCCTCGCTGCCGCCTTCCCCTCCTCCCTC
TCGACCTCGCCCTCCCGCCTCCTCCTCTCTGGCCGGCACCACAGCAGCGT
CACTGCCCCCCTTCCTCCCCTCCCTCCTCGCCTCCTTGACCTCGCTGCGG
CTGCGGCTGCTCCTGCTGCTTCTTCTTGCCCCGGTCCCTCCGCCTTCATC
GTCAAAATTCCTCGCTTCTATCCACATCACCCTCCACTCGTCAGCGTCCT
CCCCTCCTCCTCCCCCTTCGTCCCTCCCTCCTCCCCCCTCGTCCACCGTG
ACGGACAAGGGCAGGTGCTGCACCCTCTGTTTGGGACGGGATGGAGCGGT
GTATATTCCTTTAAAGACGTGATAGAGGCCCTGCGGGACGTCAGGGAAGG
CAGAGGCGCTCGTCAGGTTCCCTTATCGTCCTCCGTAACTCCTCCTTCCC
CTTCCTCCTCTCCTTCCTCCTCTCCTTCCTCCTCCCCTTCCCCCTCTCCT
TCCTGCGTCCAGATGATGACGAACCACTCGCCCTGCAGCAGCAGGGGCTG
GGAGGAAGGGAGGGAGGGAGGGGTGGCGGGAGGGAGAAGGAGGAATGTGG
GGGTGGACGCGGCAAATGGATTGTTGGTTTGGAATGAGGAGGAGGACAGA
GACGAGGAAAAGGGAGACGGAATGAATGTGTGTTAG
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Synonyms
Publications