|
|
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr9 | genome | chr9:1160667..1163301 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO09G03960.1 ID=NO09G03960.1|Name=NO09G03960.1|organism=Nannochloropsis oceanica|type=mRNA|length=2561bp
CAAGAACGAACAACGCACTCTTTCAAGCCACTGGTTGACAGGCTACATGA
AGACATGTGTACATATTCTAAACTCTAGGTTGAGTCCCTGAGCGATTGAT
AGTCCACATGCTTCGTGCTTAGAGATTATGCGTATGACGACGGTGATGAT
GTGTGTGTGCCATCTGCGTGCCATCTGGCAAAATCTGGCAAACGATGTAC
TCTTAGAGATTCCGTCCTCCTTCGTGCAGTGGACTCGCACATCGCTCCAA
GCACAGGCCTTTAAGCTCTTTGGGCCTGAGCCTTGTCACACTCAGACGGA
AGCTGCGCATTATTCATCGTTTCCTTGTCGCATGCTCGGGTTGCTCGCTC
TGGTTGCGTAGCTTACGTGAGCGACTCCAAAATGCAATAGAATTTAGAAC
CATATGGGCCCACGGAATGTACATGTTCTTTATTATCGTGCACCCCAAAA
GGACTGCTGTGGGGAGGATTATGCACTCATGTCCGTTTATAGTGCACAGT
GAACTGTATTGAGTGGTAAACGTGTCCATGTGCATTTGTGTGCGAAGAGC
GCAGGTAGACAGATTCTAGTAGAGACATGGTGGGGTTTGAGAGACGGTCA
GTGGGACAAGGACATTCCGGTAGCACACACCGTATCCCTCATGCATGCAC
ATGTTGTTTACAGTGTAAATGCGGGGTGAATTTCGACTACGCAGGGTTCT
ATTTATTCCTTACCCTTTCCATCCTCCCTCTCTCTCCTTCTCACAGAAGC
AATCCCTTCCCCCTATTCTTCGGATTCTTATTAATCAGGTAAATGTCGTG
AGTGGGGTTTATCTTGCATCTCTGAGAGTGACATTCCTAAGACAGTATCA
GCATGAATTAGCATGAATTTTATACATGTTTCCCTCTCTTACTCATCTTT
GTTTTGCTCCACTCTTTCTAAACACATCCTCTTCATCCTCACCTCCTTCT
TCTCTTCCCCTATATCACCTCCGAAAGCAATGGCACTTATCTTTCCATCT
TCACAAACAATTGTCACCTACACCCTTGACTCTGAAATTAACAACGACTT
CCTCACCCGCCTGCTACCCTTCTCTACTCATTCCATCTGCCTCCTCCTTC
CTCTAGAATGTCTAGAGTAGGAATCTAGGTCACTGAACCATTCACAACCA
CTTCAATCGGTACTGCTCACAATGTACCCAAAGCTATCTTCTGGCTCTCT
TCCATGCATATAAATCTTTGACAGCTCGCTGCCCCGTTTTAGATGAGCCG
TATCGTGGCCCCTCGTCTTCCTCTTGTCCCACCCCTCCCTCCCTCATCTC
CTTCCTGCTCTTCTCTCCTGACCTCCTCCCCCAATCCCATCTCACCACTC
CACCCTTTTTTCCCCTTATTTTGAACAGGGAAATGAACGACCATTTTTCA
AAAAGAGGTCGTGGCTTTTTCGCCCCTCACCCTCTACCGCATCATGTGCT
GCCCACATATGCATTTTCAAGTAAAAGCTTGCCAATCTCCCAGATTTTTA
CCTTTCAAAGCATCCTCCCCCCCCCCTGATGATACAGCAATGAAGCTGAG
TGGCGCCTTCTTCATCACCCTTTTCGCCTCGCTCGTGTTTCATGTCGTCG
GGGACTGTCCGAGTTTAAGGCCATTTGCTGAGACGAGCGTGGTGAATGGC
CAAGGTGCCTTCTACAAAGTCCGAATCGCCGGGGGCTCAGAGGCCATCAA
AAATGCAACCTTTTCGATCACTCTGCCCGATGGTGTGAGTATTCGTGACT
TTGAAGTCTGGCCGAGACGTCGAGACCCCTTGCAAAACGGTACCGTATTG
ACCTGGAGTAATGTGTCCATGCGCCCATATATGCGCTCTAGTTTCCACGT
GACATTGGGCGTGAATCTGACTTCCGTAATTGGGTTGAATGGATCGACGG
GCTGCACCTCGGGCGAGATCTCCTTTCAATCTACTCTGAGCGACGGCGAT
CACTGCAATGTGGATGCGCCAGCCATAAGCACGAAGGTGGAAAATGTGAC
TTCCGGGCAGGGGGATAGATGTGGCGGTAGTTCTACTCCCTACACCGCGA
AGAACCAGTCCGTGTTCTCCTGGGGGACGTATAAACCTTTTGACGCAGCG
AACCTGCACATCAATGGTATCCAGAACTGTCTAGATGCATGCGCTGACGC
CTCTGGCTTCTTTGTGGCCTGGAAGCCTAATCCAGAGGCTGACGACTGCT
ATTGCCAGTCGAAATCTCAGTATCTTGTTGACGGTGTTGAAAAGGACACT
GCGCTTTCTGGTTACACCATCTTTGAGAATCCGGCTGAATTGCATGTGCG
ACGAAATTAATCTGGTTCCATCTGTTTTTCGTACTTTCTGCAGTTTATTT
TTGATATGTCACCTTGGAGGAAAGCGGGAGATGGCATAATGGCAGGTCCT
ATTTTCTTACTATAAAATGTATTTTACGCGTCGCTGTACATGTATTCTAT
GCGTCAAATTTAATACTCCAAAGTTTTTTGAGCTTTCAGCTGTGCGAGCG
ATAGACTGTTGCATTGTGGAAAAATAAAAGCATGAAGTGAACTCCGAGAG
AGTCTGTGGAA back to topprotein sequence of NO09G03960.1 >NO09G03960.1-protein ID=NO09G03960.1-protein|Name=NO09G03960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=289bp
MCCPHMHFQVKACQSPRFLPFKASSPPPDDTAMKLSGAFFITLFASLVFH
VVGDCPSLRPFAETSVVNGQGAFYKVRIAGGSEAIKNATFSITLPDGVSI
RDFEVWPRRRDPLQNGTVLTWSNVSMRPYMRSSFHVTLGVNLTSVIGLNG
STGCTSGEISFQSTLSDGDHCNVDAPAISTKVENVTSGQGDRCGGSSTPY
TAKNQSVFSWGTYKPFDAANLHINGIQNCLDACADASGFFVAWKPNPEAD
DCYCQSKSQYLVDGVEKDTALSGYTIFENPAELHVRRN* back to topmRNA from alignment at chr9:1160667..1163301+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO09G03960.1 ID=NO09G03960.1|Name=NO09G03960.1|organism=Nannochloropsis oceanica|type=mRNA|length=2635bp|location=Sequence derived from alignment at chr9:1160667..1163301+ (Nannochloropsis oceanica)
CAAGAACGAACAACGCACTCTTTCAAGCCACTGGTTGACAGGCTACATGA
AGACATGTGTACATATTCTAAACTCTAGGTTGAGTCCCTGAGCGATTGAT
AGTCCACATGCTTCGTGCTTAGAGATTATGCGTATGACGACGGTGATGAT
GTGTGTGTGCCATCTGCGTGCCATCTGGCAAAATCTGGCAAACGATGTAC
TCTTAGAGATTCCGTCCTCCTTCGTGCAGTGGACTCGCACATCGCTCCAA
GCACAGGCCTTTAAGCTCTTTGGGCCTGAGCCTTGTCACACTCAGACGGA
AGCTGCGCATTATTCATCGTTTCCTTGTCGCATGCTCGGGTTGCTCGCTC
TGGTTGCGTAGCTTACGTGAGCGACTCCAAAATGCAATAGAATTTAGAAC
CATATGGGCCCACGGAATGTACATGTTCTTTATTATCGTGCACCCCAAAA
GGACTGCTGTGGGGAGGATTATGCACTCATGTCCGTTTATAGTGCACAGT
GAACTGTATTGAGTGGTAAACGTGTCCATGTGCATTTGTGTGCGAAGAGC
GCAGGTAGACAGATTCTAGTAGAGACATGGTGGGGTTTGAGAGACGGTCA
GTGGGACAAGGACATTCCGGTAGCACACACCGTATCCCTCATGCATGCAC
ATGTTGTTTACAGTGTAAATGCGGGGTGAATTTCGACTACGCAGGGTTCT
ATTTATTCCTTACCCTTTCCATCCTCCCTCTCTCTCCTTCTCACAGAAGC
AATCCCTTCCCCCTATTCTTCGGATTCTTATTAATCAGGTAAATGTCGTG
AGTGGGGTTTATCTTGCATCTCTGAGAGTGACATTCCTAAGACAGTATCA
GCATGAATTAGCATGAATTTTATACATGTTTCCCTCTCTTACTCATCTTT
GTTTTGCTCCACTCTTTCTAAACACATCCTCTTCATCCTCACCTCCTTCT
TCTCTTCCCCTATATCACCTCCGAAAGCAATGGCACTTATCTTTCCATCT
TCACAAACAATTGTCACCTACACCCTTGACTCTGAAATTAACAACGACTT
CCTCACCCGCCTGCTACCCTTCTCTACTCATTCCATCTGCCTCCTCCTTC
CTCTAGAATGTCTAGAGTAGGAATCTAGGTCACTGAACCATTCACAACCA
CTTCAATCGGTACTGCTCACAATGTACCCAAAGCTATCTTCTGGCTCTCT
TCCATGCATATAAATCTTTGACAGCTCGCTGCCCCGTTTTAGATGAGCCG
TATCGTGGCCCCTCGTCTTCCTCTTGTCCCACCCCTCCCTCCCTCATCTC
CTTCCTGCTCTTCTCTCCTGACCTCCTCCCCCAATCCCATCTCACCACTC
CACCCTTTTTTCCCCTTATTTTGAACAGGGAAATGAACGACCATTTTTCA
AAAAGAGGTCGTGGCTTTTTCGCCCCTCACCCTCTACCGCATCATGTGCT
GCCCACATATGCATTTTCAAGTAAAAGCTTGCCAATCTCCCAGATTTTTA
CCTTTCAAAGCATCCTCCCCCCCCCCTGATGATACAGCAATGAAGCTGAG
TGGCGCCTTCTTCATCACCCTTTTCGCCTCGCTCGTGTTTCATGTCGTCG
GGGACTGTCCGAGTTTAAGGCCATTTGCTGAGACGAGCGTGGTGAATGGC
CAAGGTGCCTTCTACAAAGTCCGAATCGCCGGGGGCTCAGAGGCCATCAA
AAATGCAACCTTTTCGGTAAGAATATTTCAAGTCACGTGGCAGCACGCAC
GGCCAAGTGACTCATACACTTTTCATGCTTTCATATGTAGATCACTCTGC
CCGATGGTGTGAGTATTCGTGACTTTGAAGTCTGGCCGAGACGTCGAGAC
CCCTTGCAAAACGGTACCGTATTGACCTGGAGTAATGTGTCCATGCGCCC
ATATATGCGCTCTAGTTTCCACGTGACATTGGGCGTGAATCTGACTTCCG
TAATTGGGTTGAATGGATCGACGGGCTGCACCTCGGGCGAGATCTCCTTT
CAATCTACTCTGAGCGACGGCGATCACTGCAATGTGGATGCGCCAGCCAT
AAGCACGAAGGTGGAAAATGTGACTTCCGGGCAGGGGGATAGATGTGGCG
GTAGTTCTACTCCCTACACCGCGAAGAACCAGTCCGTGTTCTCCTGGGGG
ACGTATAAACCTTTTGACGCAGCGAACCTGCACATCAATGGTATCCAGAA
CTGTCTAGATGCATGCGCTGACGCCTCTGGCTTCTTTGTGGCCTGGAAGC
CTAATCCAGAGGCTGACGACTGCTATTGCCAGTCGAAATCTCAGTATCTT
GTTGACGGTGTTGAAAAGGACACTGCGCTTTCTGGTTACACCATCTTTGA
GAATCCGGCTGAATTGCATGTGCGACGAAATTAATCTGGTTCCATCTGTT
TTTCGTACTTTCTGCAGTTTATTTTTGATATGTCACCTTGGAGGAAAGCG
GGAGATGGCATAATGGCAGGTCCTATTTTCTTACTATAAAATGTATTTTA
CGCGTCGCTGTACATGTATTCTATGCGTCAAATTTAATACTCCAAAGTTT
TTTGAGCTTTCAGCTGTGCGAGCGATAGACTGTTGCATTGTGGAAAAATA
AAAGCATGAAGTGAACTCCGAGAGAGTCTGTGGAA back to topCoding sequence (CDS) from alignment at chr9:1160667..1163301+ >NO09G03960.1 ID=NO09G03960.1|Name=NO09G03960.1|organism=Nannochloropsis oceanica|type=CDS|length=867bp|location=Sequence derived from alignment at chr9:1160667..1163301+ (Nannochloropsis oceanica)
ATGTGCTGCCCACATATGCATTTTCAAGTAAAAGCTTGCCAATCTCCCAG
ATTTTTACCTTTCAAAGCATCCTCCCCCCCCCCTGATGATACAGCAATGA
AGCTGAGTGGCGCCTTCTTCATCACCCTTTTCGCCTCGCTCGTGTTTCAT
GTCGTCGGGGACTGTCCGAGTTTAAGGCCATTTGCTGAGACGAGCGTGGT
GAATGGCCAAGGTGCCTTCTACAAAGTCCGAATCGCCGGGGGCTCAGAGG
CCATCAAAAATGCAACCTTTTCGATCACTCTGCCCGATGGTGTGAGTATT
CGTGACTTTGAAGTCTGGCCGAGACGTCGAGACCCCTTGCAAAACGGTAC
CGTATTGACCTGGAGTAATGTGTCCATGCGCCCATATATGCGCTCTAGTT
TCCACGTGACATTGGGCGTGAATCTGACTTCCGTAATTGGGTTGAATGGA
TCGACGGGCTGCACCTCGGGCGAGATCTCCTTTCAATCTACTCTGAGCGA
CGGCGATCACTGCAATGTGGATGCGCCAGCCATAAGCACGAAGGTGGAAA
ATGTGACTTCCGGGCAGGGGGATAGATGTGGCGGTAGTTCTACTCCCTAC
ACCGCGAAGAACCAGTCCGTGTTCTCCTGGGGGACGTATAAACCTTTTGA
CGCAGCGAACCTGCACATCAATGGTATCCAGAACTGTCTAGATGCATGCG
CTGACGCCTCTGGCTTCTTTGTGGCCTGGAAGCCTAATCCAGAGGCTGAC
GACTGCTATTGCCAGTCGAAATCTCAGTATCTTGTTGACGGTGTTGAAAA
GGACACTGCGCTTTCTGGTTACACCATCTTTGAGAATCCGGCTGAATTGC
ATGTGCGACGAAATTAA back to top
|