NO09G03910.1, NO09G03910.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G03910.1
Unique Name	NO09G03910.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3692
Alignment location	chr9:1144671..1151258 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:1144671..1151258 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO09G03910.1 vs.
Match: EWM27410.1 (Zinc finger, CCCH-type [Nannochloropsis gaditana])

HSP 1 Score: 969.5 bits (2505), Expect = 8.300e-279
Identity = 638/1010 (63.17%), Postives = 694/1010 (68.71%), Query Frame = 0

Query:   67 MAAGESGLDDELAALTFEIEGGGYNNGGGQEGSGGLVPRDGRRGGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSKCVRDDDCPFKHVTEEDKTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEEGEFNVSSQKAADEAAAAAAAAAAAAATATAALAGGTELNSSFARGGPSGNAGPSVVGGMGTGRGGGMTG-EGRGAGAQQQQQLQLLALQQQQQLLQQQVQRQQQQQQQQQQESGGLPFGVGAGP--------GREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGRGAGGLYGNGAGGAGSLTGASLGGVGGMGGGAGGALFRGAGMGTGNGGMPGPLIPAPHE--IRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFFSVNESGHWQGAAVMSSLIRSQPHPQHLAPLQLLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPDIGRQLLYLIYASAEVSLALAGAEASMPPAGGDGGAGGGPFGYGGGGLMDGGGGGGGGEGGGGGGLQQQEQEQQYMSGGGGGGGGGGGVQQ-------GGETRGGALGGGGIIPSFLGVVSSSPAQSHVFTHPALLPSLPPSFPCLQEMLDECLGRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYNLERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGPLSAEQTQRLANLLAVRAGALPL-IPPSTPTFTSSSASFSSSSSSTSSSSFSSSSSLSSFLP-LRSGGGREGGREGGLFASNTSSSVSASTSPASTNSNSPGSIYRHLPSNALLQLQ--QQQQQQQRQQQQQQEGRLLLEGFGGGGLGSVKGSSTATTSSSNSSNSSSNSIASSLGGTSVG-------FSGGKAESTLGSSPGGSSSSL 1048
            MAAGES LDDELAAL+FEIE    ++G    G  GLVPR G  GGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSKCVRDDDCPFKHVTEEDKTECVFYRQGFCMYGPFCRYKHVHRNPEDAPE+GEFN+SSQKAADEAAAAAA     +              +S+  G  SG  G +VVGG G GR G M G  G  AG    QQLQLL++                QQQ Q Q     PFG+ +G         GREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFG+DCVFAHGE ELRKHPLAIAREQQQAHRA GGGRG                        G  GG G  +             P   +P P +  +RF                VIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLF+SVNESGHWQGAAVM+S IRSQ  P HL PLQ+LQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTP+IGRQLLYLIY+S+EVSLAL GAEAS+P  GG  G GGGP+G  G       GGG GG GGGGG L            GGGG GGGGG QQ       GGE  G   G GG      G+  + P    VF+    +      FPC +E LDECLGRGLFSLPAGGALE +AKEVVLPG+TLFL+NA+DRT+FGIFEA SPVAYNLERTSTST YP+QVRIRC LEAPPLTE+DP+VR +LGPLP+S+PLGRAGPLS  QTQRLA LLA RA ALPL +PPSTPTF                SS+SSSSS SSFLP LR   G+EGGRE GL   +T S+ SASTS AST SNSPG+ YR LP  A + LQ  QQQQQQQ+QQ QQQ+ RLLL G GG GL           SSS +S+SSS+SI SS+ GTS G         G      LG SP  S  S+
Sbjct:    1 MAAGESSLDDELAALSFEIEASSNSDGQDGRGDAGLVPRRG--GGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGSKCVRDDDCPFKHVTEEDKTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEQGEFNISSQKAADEAAAAAAEGGNVSGE-----------GNSYPPGASSGLPG-NVVGGFGGGRVGEMAGARGGRAGVVVPQQLQLLSM---------------HQQQSQPQHGAASPFGLASGTGMGGGREGGREGGRDRRPGGALERNENYKTTLCNHWLSNKGLCPFGDDCVFAHGETELRKHPLAIAREQQQAHRA-GGGRGE---------------------TDGREGGLGRKI-----------RFPDLGLPWPDQARVRFF---------------VIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFYSVNESGHWQGAAVMTSPIRSQQQPPHLPPLQMLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPEIGRQLLYLIYSSSEVSLALGGAEASLP--GGGFGGGGGPYGSFG-----ASGGGRGGGGGGGGVLD-----------GGGGNGGGGGAQQDQHPLPRGGEGGGPQQGEGG-----EGIGQTFP----VFSGQGFI------FPCTEETLDECLGRGLFSLPAGGALETYAKEVVLPGSTLFLANATDRTLFGIFEAASPVAYNLERTSTSTMYPLQVRIRCLLEAPPLTESDPDVRSILGPLPASSPLGRAGPLSENQTQRLATLLASRAKALPLFLPPSTPTFL---------------SSYSSSSSSSSFLPLLRGPSGKEGGRERGLSLESTGST-SASTSLASTESNSPGAGYRSLPPLATMHLQQKQQQQQQQKQQLQQQQSRLLLGGIGGRGL--------LNGSSSTTSSSSSSSIVSSMSGTSTGAVVNKGFLEGLSPPRRLGLSPSLSHLSV 876

The following BLAST results are available for this feature:

BLAST of NO09G03910.1 vs.

BLAST of NO09G03910.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27410.1	8.300e-279	63.17	Zinc finger, CCCH-type [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO09G03910	NO09G03910	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO09G03910.1	NO09G03910.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO09G03910.1.cds1	NO09G03910.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds2	NO09G03910.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds3	NO09G03910.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds4	NO09G03910.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds5	NO09G03910.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds6	NO09G03910.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds7	NO09G03910.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds8	NO09G03910.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds9	NO09G03910.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds10	NO09G03910.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds11	NO09G03910.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds12	NO09G03910.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds13	NO09G03910.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds14	NO09G03910.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds15	NO09G03910.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds16	NO09G03910.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds17	NO09G03910.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03910.1.cds18	NO09G03910.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr9:1144671..1151258+
coding sequence from alignment at chr9:1144671..1151258+

mRNA sequence

>NO09G03910.1 ID=NO09G03910.1|Name=NO09G03910.1|organism=Nannochloropsis oceanica|type=mRNA|length=3692bp
TTTCCCATATGTCCCAAGCCATCGGTATGCAAGCATCATGGCAGGCATGG
ACAGACAGATTATCCAGGCAAATGAAAAGGACAGGGCCTCCTCGGCCCAC
ACGATCCAGGCAAAGTGCGAACATTTTTTCTGTTCTCAGTACTCTCAGTC
GCCGTCGGACGAACGACTCATCGCTGGGGACACTCCTTGGAGCAGCACTT
ACTACCGCCTGGGCCAACAACTCCTCCAGCGCAACACCGCGCTCCGCGCC
CGTCAATAAATGCATGCATGACACTTTGTGATATTTTGCTTGGGCGCGAC
TTTCGCGGTTCCCGCTGGCGGCTTCACGAAAGGCGCCCTAACACGACAGA
CGGATGGACGACGCATGTCTTCTTCATTCCCAAAAAAGCAACTGGGACAT
GCAACGCCGGGCACACGCACACGAAGGTCTTTAAAGGCCCCGTCTTTCCG
TCCTTTATGAACTTTCGCACCACTTAATCATGTTTAAATGCACAAGATGC
TGGCATGTCTGTCCAGGGCGCTTAGCCAGGGTGCGAGGTTCAGCAATCCC
CGCCCCACCCCCCTCAGAGAAATCGTTGACTGAGAGGCAGATGCTTCACA
ATGACAATTCTTGGAGACCCTTTGGTGGAGCATACCTGCTGATTCTCACC
ACCCCCTCCTCCCTTCCCTACACAGCCATGGCAGCCGGCGAAAGTGGCCT
GGATGATGAGCTAGCCGCGCTCACATTTGAGATCGAGGGCGGCGGCTACA
ACAACGGAGGGGGGCAAGAAGGCAGCGGAGGCCTTGTTCCGCGAGATGGG
AGAAGGGGGGGGCGGTCCATGGCCCCGGGTAGCAAGAACGTCGTCTGCAT
CCACTACCTAGTGGGCATGTGTGCCTTGGACAAAGACTGTCCCTATTTGC
ACCAGTATGACCTGGACCGGGTGCCAATCTGCCCGTTTGGCAGCAAATGC
GTGCGCGACGACGACTGCCCTTTCAAGCATGTCACCGAGGAGGACAAGAC
GGAGTGCGTATTCTACAGGCAGGGTTTTTGCATGTACGGGCCCTTCTGCC
GCTATAAGCACGTGCACCGCAATCCGGAAGACGCTCCAGAGGAAGGCGAA
TTCAATGTTTCTTCGCAAAAGGCAGCGGATGAAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCGACAGCGACAGCTGCTCTAGCAGGAGGAA
CGGAGCTGAACAGCAGCTTTGCCCGCGGAGGGCCATCAGGCAACGCAGGC
CCGTCGGTCGTTGGCGGTATGGGCACGGGGAGGGGGGGAGGGATGACAGG
CGAGGGACGAGGGGCAGGCGCGCAGCAGCAGCAGCAGCTACAGCTCCTCG
CCCTCCAGCAGCAGCAGCAGCTACTGCAACAGCAAGTACAGCGGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAAGAGTCAGGAGGTCTCCCTTTCGGCGT
TGGGGCGGGGCCTGGAAGGGAGGGAGGGAGGGACCGGCGGCCGGGGGGGG
CGTTGGAGCGGAACGAGAATTATAAGACGACCCTATGCAATCACTGGCTG
AGCAATAAAGGCCTGTGCCCGTTTGGCGAGGACTGCGTGTTTGCCCACGG
CGAGGCGGAGTTAAGGAAGCACCCTCTGGCCATTGCGCGCGAGCAGCAGC
AGGCGCACAGGGCCGTAGGGGGGGGACGAGGTGCTGGGGGTCTCTACGGC
AACGGCGCCGGTGGAGCTGGCAGCCTGACCGGAGCCTCCCTCGGAGGAGT
GGGGGGGATGGGAGGAGGGGCGGGGGGAGCACTGTTTAGGGGGGCGGGCA
TGGGCACGGGGAATGGAGGGATGCCTGGACCGCTTATTCCGGCGCCGCAT
GAGATCCGGTTCGTGGACCTGGGCATTCCCTGGCCGGAGCAAGCCCGCGT
CCGTTTCTTCGTCATTAAGAGCCTCAACTACAAAAATTTGGCGCAGAGTG
TACGGAGGGGCGTTTGGCGCACGCACCGCAACAACGAGCGGACATTGAAC
GAGGCCTTCCGCACCTGCGACAAGGTCGTCCTCTTCTTCTCGGTCAACGA
GTCGGGCCACTGGCAGGGTGCCGCCGTCATGTCCTCCCTCATCCGCTCCC
AGCCACACCCGCAACATTTGGCTCCCCTGCAGCTCCTCCAACACCACCAG
GACGGCTGGACTGCAGAGTTCTCCCTGGAGTGGCTGCGGCTGGTGTCCTT
GCCCTTCCCCCACACGCGGCCCCTCCGGAACCCCCTCAACGACAACCTCC
CCATCTCCCGCTCACGCGATTGCCAGGAGCTGACCCCCGACATCGGTCGA
CAACTGCTTTATCTCATCTACGCCTCCGCTGAGGTTTCTCTGGCCTTGGC
CGGCGCCGAGGCCAGCATGCCGCCTGCCGGAGGTGACGGTGGTGCGGGTG
GAGGTCCCTTTGGTTATGGCGGCGGCGGACTGATGGATGGGGGAGGAGGA
GGAGGCGGAGGTGAAGGAGGGGGAGGGGGTGGGTTGCAGCAGCAGGAGCA
GGAGCAGCAGTACATGAGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGGAG
GAGTGCAACAAGGAGGGGAGACGCGGGGAGGGGCCTTGGGAGGGGGCGGA
ATTATCCCGTCTTTCCTGGGCGTGGTTTCATCTTCCCCTGCACAGAGTCA
TGTTTTCACCCACCCTGCCCTCCTTCCTTCCCTCCCTCCCTCCTTCCCTT
GTCTCCAGGAGATGCTGGACGAGTGCTTGGGCCGTGGTCTCTTCTCTCTG
CCGGCCGGCGGGGCCTTGGAAAACTTTGCGAAAGAGGTGGTGCTCCCCGG
CACGACGCTCTTCCTGTCCAACGCCTCGGACCGGACCATCTTCGGCATCT
TCGAAGCCGTCTCCCCCGTGGCGTACAATCTAGAGCGGACAAGCACCAGC
ACCTCATACCCCGTGCAGGTTCGCATCCGCTGCGCCCTGGAAGCCCCTCC
TCTAACGGAAGCCGACCCGGAAGTACGCTATCTCCTCGGTCCTCTCCCTT
CCTCCGCTCCACTCGGCCGCGCCGGCCCCTTGAGCGCCGAACAGACGCAA
CGCCTTGCCAATCTCCTCGCGGTGCGTGCCGGGGCCCTTCCTCTCATCCC
TCCCTCCACTCCTACATTCACTTCCTCCTCCGCCTCGTTTTCGTCCTCCT
CCTCTTCCACCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCCTCTCCTCC
TTCCTCCCCCTCCGAAGCGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GCTGTTCGCGTCCAACACCTCTTCCTCCGTCAGCGCCTCGACGAGTCCCG
CCTCAACGAATTCCAACAGCCCCGGCAGCATCTACCGGCACCTCCCCTCC
AACGCCCTCCTTCAGCTACAGCAGCAGCAGCAGCAACAGCAGCGCCAGCA
GCAGCAGCAACAGGAAGGTCGCTTGTTGCTGGAGGGTTTTGGTGGGGGAG
GGCTCGGCAGTGTGAAGGGGTCGTCCACCGCGACTACCAGCAGCAGCAAC
AGCAGCAACAGCAGCAGCAACAGCATTGCGTCCTCCCTCGGTGGCACCTC
CGTCGGCTTTTCAGGAGGAAAAGCCGAATCTACCCTCGGCAGCAGCCCGG
GCGGCAGCAGCAGCTCCCTCATCCTCCCCCCTCCCTTCGCGGGCGGGGCT
CCTCCGGGTATTCAGCTGCCAGCGTCGTGGCGACCGCTCTGA

protein sequence of NO09G03910.1

>NO09G03910.1-protein ID=NO09G03910.1-protein|Name=NO09G03910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1071bp
MFKCTRCWHVCPGRLARVRGSAIPAPPPSEKSLTERQMLHNDNSWRPFGG
AYLLILTTPSSLPYTAMAAGESGLDDELAALTFEIEGGGYNNGGGQEGSG
GLVPRDGRRGGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPI
CPFGSKCVRDDDCPFKHVTEEDKTECVFYRQGFCMYGPFCRYKHVHRNPE
DAPEEGEFNVSSQKAADEAAAAAAAAAAAAATATAALAGGTELNSSFARG
GPSGNAGPSVVGGMGTGRGGGMTGEGRGAGAQQQQQLQLLALQQQQQLLQ
QQVQRQQQQQQQQQQESGGLPFGVGAGPGREGGRDRRPGGALERNENYKT
TLCNHWLSNKGLCPFGEDCVFAHGEAELRKHPLAIAREQQQAHRAVGGGR
GAGGLYGNGAGGAGSLTGASLGGVGGMGGGAGGALFRGAGMGTGNGGMPG
PLIPAPHEIRFVDLGIPWPEQARVRFFVIKSLNYKNLAQSVRRGVWRTHR
NNERTLNEAFRTCDKVVLFFSVNESGHWQGAAVMSSLIRSQPHPQHLAPL
QLLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQE
LTPDIGRQLLYLIYASAEVSLALAGAEASMPPAGGDGGAGGGPFGYGGGG
LMDGGGGGGGGEGGGGGGLQQQEQEQQYMSGGGGGGGGGGGVQQGGETRG
GALGGGGIIPSFLGVVSSSPAQSHVFTHPALLPSLPPSFPCLQEMLDECL
GRGLFSLPAGGALENFAKEVVLPGTTLFLSNASDRTIFGIFEAVSPVAYN
LERTSTSTSYPVQVRIRCALEAPPLTEADPEVRYLLGPLPSSAPLGRAGP
LSAEQTQRLANLLAVRAGALPLIPPSTPTFTSSSASFSSSSSSTSSSSFS
SSSSLSSFLPLRSGGGREGGREGGLFASNTSSSVSASTSPASTNSNSPGS
IYRHLPSNALLQLQQQQQQQQRQQQQQQEGRLLLEGFGGGGLGSVKGSST
ATTSSSNSSNSSSNSIASSLGGTSVGFSGGKAESTLGSSPGGSSSSLILP
PPFAGGAPPGIQLPASWRPL*

mRNA from alignment at chr9:1144671..1151258+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO09G03910.1 ID=NO09G03910.1|Name=NO09G03910.1|organism=Nannochloropsis oceanica|type=mRNA|length=6588bp|location=Sequence derived from alignment at chr9:1144671..1151258+ (Nannochloropsis oceanica)
TTTCCCATATGTCCCAAGCCATCGGTATGCAAGCATCATGGCAGGCATGG
ACAGACAGATTATCCAGGCAAATGAAAAGGACAGGGCCTCCTCGGCCCAC
ACGATCCAGGCAAAGTGCGAACATTTTTTCTGTTCTCAGTACTCTCAGTC
GCCGTCGGACGAACGACTCATCGCTGGGGACACTCCTTGGAGCAGCACTT
ACTACCGCCTGGGCCAACAACTCCTCCAGCGCAACACCGCGCTCCGCGCC
CGTCAATAAATGCATGCATGACACTTTGTGATATTTTGCTTGGGCGCGAC
TTTCGCGGTTCCCGCTGGCGGCTTCACGAAAGGCGCCCTAACACGACAGA
CGGATGGACGACGCATGTCTTCTTCATTCCCAAAAAAGCAACTGGGACAT
GCAACGCCGGGCACACGCACACGAAGGTCTTTAAAGGCCCCGTCTTTCCG
TCCTTTATGAACTTTCGCACCACTTAATCATGTTTAAATGCACAAGATGC
TGGCATGTCTGTCCAGGGCGCTTAGCCAGGGTGCGAGGTTCAGCAATCCC
CGCCCCACCCCCCTCAGAGAAATCGTTGACTGAGAGGCAGATGCTTCACA
ATGACAATTCTTGGAGACCCTTTGGTGGAGCATACCTGCTGATTCTCACC
ACCCCCTCCTCCCTTCCCTACACAGCCATGGCAGCCGGCGAAAGTGGCCT
GGATGATGAGCTAGCCGCGCTCACATTTGAGATCGAGGGCGGCGGCTACA
ACAACGGAGGGGGGCAAGAAGGCAGCGGAGGCCTTGTTCCGCGAGATGGG
AGAAGGGGGGGGCGGTCCATGGCCCCGGGTAGCAAGAACGTCGTCTGCAT
CCACTACCTAGTGGGCATGTGTGCCTTGGACAAAGACTGTCCCTATTTGC
ACCAGTATGACCTGGACCGGGTGCCAATCTGCCCGTACGTGCTTGGGAGG
GAGGACGGAGGGGACGCGTGTCATACCGATGATGACGGACATCTATCTGA
CCTTGCTTTCCTACTTCCACACTTTCCTAGGTTTGGCAGCAAATGCGTGC
GCGACGACGACTGCCCTTTCAAGCATGTCACCGAGGTAAGGGTGGCGGGG
AGAGTGTATAGGAGGGAAGCCGGGCGGGACGGGGGGGATGGAATCTCGTC
CTGAATTTGGAAGTGGAATCGAATGAAAACGATTCGTCGCCCACTCGGAA
GAAGCATGAGGGACGAAGAGAGAATGGAGCGAAGATGAAGTAAGGCTAGA
GAGGGGACAAGAAAGACAGTAGGACCAACAAAGAGGGAGGGAAGGAGGAA
GGGAGGGAGGATTCAATGCGGGGAGGTGGCTTACAGTCCTGGACGGCGGC
AATATTGAGCTTTGTGATTTTCTCACTGAACTCCCTCTTTCCCCTCTCTT
CCTTTTATCTCTTTTGCATGCACTCAGGAGGACAAGACGGAGTGCGTATT
CTACAGGCAGGGTTTTTGCATGTACGGGCCCTTCTGCCGGTACGAGGAAT
GAAGGAGAGGGAGAGAGGGAGGAAGATGTGAATGCATACCTGGATGATGG
ATGGATGAAGCAGTTGGTGGTATGCTTTCCTTAGCCCGAGAATGATTTAT
TGCACGCGCGTTGCGGCGTGTCATGAATGTAGGGCGGCGTGTAAAGGGAT
TAGGGTCATTTTCATTCCCACCCTGGGCGCTCTTAGATTCCGCCCCTCAC
CCTCTCCACTGCCTACGACCCTCACCTGCTCCGAGCCCTCCTCCTCCTCT
TTTACCTCATCTTCTCTCTTCAGCTCTGCTCCCCCCACCCATTTTGTCAT
CATTGCCATCCTCAACCCATCCCGAGGTGCCAGCCCCCAATTTTTATGTC
CCAACACTCACCGCCCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCCAGCT
ATAAGCACGTGCACCGCAATCCGGAAGACGCTCCAGAGGAAGGCGAATTC
AATGTTTCTTCGCAAAAGGCAGCGGATGAAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCGACAGCGACAGCTGCTCTAGCAGGAGGAACGG
AGCTGAACAGCAGCTTTGCCCGCGGAGGGCCATCAGGTATGTTTGTCCTC
GAGCCCTTCCGCCCTTCCTTCCTCCCTCTTCCCCCCCTTTCTTTCCTCTT
ACTTCCTCCTTTTACTCTCCTTCGAATCGCCAGTGTGGAAAAGGCTCTCC
TTCCCTCCCTCTTTCCATCCCTGCCTCGCTCTCTCTTCCTCACGCCGCAG
TCATTTTCAAACACCGCCATCTTTCCACCCCTCCAACTCCGTATCTCCCT
CCCTCCCTCCCTCCCTCCCTCCTCACTTCCTTACTCTCAGGCAACGCAGG
CCCGTCGGTCGTTGGCGGTATGGGCACGGGGAGGGGGGGAGGGATGACAG
GCGAGGGACGAGGGGCAGGCGCGCAGCAGCAGCAGCAGCTACAGCTCCTC
GCCCTCCAGCAGCAGCAGCAGCTACTGCAACAGCAAGTACAGCGGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAAGAGTCAGGAGGTCTCCCTTTCGGCG
TTGGGGCGGGGCCTGGAAGGGAGGGAGGGAGGGACCGGCGGCCGGGGGGG
GCGTTGGAGCGGAACGAGAATTATAAGACGACCCTATGCAATCACTGGCT
GAGCAATAAAGTGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAATCTCACACGTCCGGTGGGTATCCGACTGGG
ACGGACAAGACATATCCACTCCTCACCTCCCTCCCCTCCCTCCCTCCCCT
CCCTTGCGCAGGGCCTGTGCCCGTTTGGCGAGGACTGCGTGTTTGCCCAC
GGCGAGGCGGAGTTAAGGAAGCACCCTCTGGCCATTGCGCGCGAGCAGCA
GCAGGCGCACAGGGCCGTAGGGGGGGGACGAGGTAAGGAGGGGAGGGAGG
GAGGGAGAGGAATGAAGGAAGGGAAAAGGTGACTCCACCAAGACGTGTCT
CTGCACACGCTCTCACTCACGGATGTCTCTTCAAGGTGTTTGTCGTGCTG
TGGTACTCGTCCTTCTCCACCCAACGTGTCCTCACATTCGCCCGACTCCC
TAATCAAATCCGCCCCTTCCCAGGTGCTGGGGGTCTCTACGGCAACGGCG
CCGGTGGAGCTGGCAGCCTGACCGGAGCCTCCCTCGGAGGAGTGGGGGGG
ATGGGAGGAGGGGCGGGGGGAGCACTGTTTAGGGGGGCGGGCATGGGCAC
GGGGAATGGAGGGATGCCTGGACCGCTTATTCCGGCGCCGCATGAGGTGA
GGGAGGGAGAGAGAGAGGGGGGGAGGGAGGGAGGGGGGTGGGAGGGAGAA
AGGATGCGAAGGCTTTCAAAAGAGCAGAAAGTACTGGATTTATTTTCGTC
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCAGATCCGGTTCGTG
GACCTGGGCATTCCCTGGCCGGAGCAAGCCCGCGTCCGTTTCTTCGTCAT
TAAGAGCCTCAACTACAAAAATTTGGCGCAGAGTGTACGGAGGGGCGTTT
GGCGCACGCACCGCAACAACGAGCGGACATTGAACGAGGTGGGTGCGCCT
CAGCATCCCCTTTCCCTCCCTCCCCCCCTCCCTCCCTTCCTTGCTCCCAC
GGGGACTTTCTATCTCTTTCTCCTTCGGCCGTTTCCTCATCAAGGTTGTC
CCCGCACCTAACCCTCCCTCCTCCCTCCCTCCCTCCCTCCCTTTTGCAGG
CCTTCCGCACCTGCGACAAGGTCGTCCTCTTCTTCTCGGTCAACGAGTCG
GGCCACTGGCAGGGTGCCGCCGTCATGTCCTCCCTCATCCGCTCCCAGCC
ACACCCGCAACATTTGGCTCCCCTGCAGCTCCTCCAACACCACCAGGACG
GTATGTTCCTCCCTAACTCCCTCGAGGCGTATTCTTCTTGCCCCTTCTGT
GCCGGTCTTTTTTCCACGCTCACCCTTCCTCCCTCCCTTTCCCTCCCTCC
CTCAGGCTGGACTGCAGAGTTCTCCCTGGAGTGGCTGCGGCTGGTGTCCT
TGCCCTTCCCCCACACGCGGCCCCTCCGGAACCCCCTCAACGACAACCTC
CCCATCTCCCGCTCACGGTAACCTCCCTCCCTCCCTCCCTCCCGCCTTCC
CTCCTTGGCCACCCTCCATCCATCCATACACCTCCCCCTCTCCACACCAC
ACACATTTACCTCCCTCCCTCCCTCCCTCCCTCCCTTTCTTCCCCCAGCG
ATTGCCAGGAGCTGACCCCCGACATCGGTCGACAACTGCTTTATCTCATC
TACGCCTCCGCTGAGGTTTCTCTGGCCTTGGCCGGCGCCGAGGCCAGCAT
GCCGCCTGTAAGGACTCCCTCCATCCCTCCCTCCCTCCCTCCCTCCCCTT
GCCGTTTTCCATCCTCTCACGTCCTTCCCTTCCTTCCTTCCCTTCCTCCC
TTCCCTCCTCCTCCTTCCTCATCTTCCGCGTCCCGGTAGGCCGGAGGTGA
CGGTGGTGCGGGTGGAGGTCCCTTTGGTTATGGCGGCGGCGGACTGATGG
ATGGGGGAGGAGGAGGAGGCGGAGGTGAAGGAGGGGGAGGGGGTGGGTTG
CAGCAGCAGGAGCAGGAGCAGCAGTACATGAGTGGTGGTGGTGGAGGAGG
AGGAGGAGGAGGAGGAGTGCAACAAGGAGGGGAGACGCGGGGAGGGGCCT
TGGGAGGGGGCGGAATTATCCCGTCTTTCCTGGGCGTGGTTTCATCTTCC
CCTGCACAGAGGTAGGTGTGAGTGATGCGGTGTTTCTCGATGACACGCGT
GTTCCGCCTTCCCGCCCTCTTTTAGTCCTTCCTTTCTTTTTCAGTCATGT
TTTCACCCACCCTGCCCTCCTTCCTTCCCTCCCTCCCTCCTTCCCTTGTC
TCCAGGAGATGCTGGACGAGTGCTTGGGCCGTGGTCTCTTCTCTCTGCCG
GCCGGCGGGGCCTTGGAAAACTTTGCGAAAGAGGTGGGTGTTGGGGAGAG
GGAGGGAGGAAGGGAGGGAGGAAGGGGGGCGTGCTGTTTGATGGAAGGAA
GAGAAAGCATAAACGCGATGCCTCCGCTTTCGACCGCGCCGTCTTCAGAC
ACTCACCCTCCCTCCTTCCCTCCCCCCTCCCTCCCCCCTCCCTCCCCCCT
CCCTTCCCAGGTGGTGCTCCCCGGCACGACGCTCTTCCTGTCCAACGCCT
CGGACCGGACCATCTTCGGCATCTTCGAAGCCGTCTCCCCCGTGGCGTAC
AATCTAGAGCGGACAAGCACCAGCACCTCATACCCCGTGCAGGTACGCCC
TCCCTCCCTCCCTCCCTTTGGTCCTTGCGGGCCCTCCCTTATGCTTTATT
CAGAACACATCCGTTTCTCACCCCTCCCTCCCTCCCTCCCTCCCTTCCTT
TCTCCCTCCTTCCCTTCCCTAGGTTCGCATCCGCTGCGCCCTGGAAGCCC
CTCCTCTAACGGAAGCCGACCCGGAAGTACGCTATCTCCTCGGTCCTCTC
CCTTCCTCCGCTCCACTCGGCCGCGCCGGCCCCTTGAGCGCCGAACAGGT
GAGCACGCTTTCCCTCCCTCCCTCCCTTCCGTCCACCCTTCCTCTTATTG
CCTCCCCTCCTCCCCCCCTCCCTCCCTCTCCCCAGACGCAACGCCTTGCC
AATCTCCTCGCGGTGCGTGCCGGGGCCCTTCCTCTCATCCCTCCCTCCAC
TCCTACATTCACTTCCTCCTCCGCCTCGTTTTCGTCCTCCTCCTCTTCCA
CCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCCTCTCCTCCTTCCTCCCC
CTCCGAAGCGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCTGTTCGC
GTCCAACACCTCTTCCTCCGTCAGCGCCTCGACGAGTCCCGCCTCAACGA
ATTCCAACAGCCCCGGCAGCATCTACCGGCACCTCCCCTCCAACGCCCTC
CTTCAGCTACAGCAGCAGCAGCAGCAACAGCAGCGCCAGCAGCAGCAGCA
ACAGGAAGGTCGCTTGTTGCTGGAGGGTTTTGGTGGGGGAGGGCTCGGCA
GGTAGGCACGACGGGAGAGAGGGAGGGGGGGAGGTTGGCCGGTGCAATAG
CCATTTGTTGCACTTCATGACGCATCCATCCCGCCGCACCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCCCTCGGCC
CCTGGTCCTCGTACAGTGTGAAGGGGTCGTCCACCGCGACTACCAGCAGC
AGCAACAGCAGCAACAGCAGCAGCAACAGCATTGCGTCCTCCCTCGGTGG
CACCTCCGTCGGCTTTTCAGGAGGAAAAGCCGAATGTACGTCACCCTCCT
TCCCTTCCTCCCTTCTTTCTTCCTTCCTTCCCTCCCTCCCTGCCCCTGTT
CCCTTCCCTTATTCTCGCCCTTGACTCCCCCTCTCCCTCCCTTTCTCCTC
TCCTCCCCCTCACTCCCGCCTCTAGCTACCCTCGGCAGCAGCCCGGGCGG
CAGCAGCAGCTCCCTCATCCTCCCCCCTCCCTTCGCGGGCGGGGCTCCTC
CGGGTATTCAGCTGCCAGCGTCGTGGCGACCGCTCTGA

Coding sequence (CDS) from alignment at chr9:1144671..1151258+

>NO09G03910.1 ID=NO09G03910.1|Name=NO09G03910.1|organism=Nannochloropsis oceanica|type=CDS|length=3213bp|location=Sequence derived from alignment at chr9:1144671..1151258+ (Nannochloropsis oceanica)
ATGTTTAAATGCACAAGATGCTGGCATGTCTGTCCAGGGCGCTTAGCCAG
GGTGCGAGGTTCAGCAATCCCCGCCCCACCCCCCTCAGAGAAATCGTTGA
CTGAGAGGCAGATGCTTCACAATGACAATTCTTGGAGACCCTTTGGTGGA
GCATACCTGCTGATTCTCACCACCCCCTCCTCCCTTCCCTACACAGCCAT
GGCAGCCGGCGAAAGTGGCCTGGATGATGAGCTAGCCGCGCTCACATTTG
AGATCGAGGGCGGCGGCTACAACAACGGAGGGGGGCAAGAAGGCAGCGGA
GGCCTTGTTCCGCGAGATGGGAGAAGGGGGGGGCGGTCCATGGCCCCGGG
TAGCAAGAACGTCGTCTGCATCCACTACCTAGTGGGCATGTGTGCCTTGG
ACAAAGACTGTCCCTATTTGCACCAGTATGACCTGGACCGGGTGCCAATC
TGCCCGTTTGGCAGCAAATGCGTGCGCGACGACGACTGCCCTTTCAAGCA
TGTCACCGAGGAGGACAAGACGGAGTGCGTATTCTACAGGCAGGGTTTTT
GCATGTACGGGCCCTTCTGCCGCTATAAGCACGTGCACCGCAATCCGGAA
GACGCTCCAGAGGAAGGCGAATTCAATGTTTCTTCGCAAAAGGCAGCGGA
TGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCGA
CAGCTGCTCTAGCAGGAGGAACGGAGCTGAACAGCAGCTTTGCCCGCGGA
GGGCCATCAGGCAACGCAGGCCCGTCGGTCGTTGGCGGTATGGGCACGGG
GAGGGGGGGAGGGATGACAGGCGAGGGACGAGGGGCAGGCGCGCAGCAGC
AGCAGCAGCTACAGCTCCTCGCCCTCCAGCAGCAGCAGCAGCTACTGCAA
CAGCAAGTACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGTC
AGGAGGTCTCCCTTTCGGCGTTGGGGCGGGGCCTGGAAGGGAGGGAGGGA
GGGACCGGCGGCCGGGGGGGGCGTTGGAGCGGAACGAGAATTATAAGACG
ACCCTATGCAATCACTGGCTGAGCAATAAAGGCCTGTGCCCGTTTGGCGA
GGACTGCGTGTTTGCCCACGGCGAGGCGGAGTTAAGGAAGCACCCTCTGG
CCATTGCGCGCGAGCAGCAGCAGGCGCACAGGGCCGTAGGGGGGGGACGA
GGTGCTGGGGGTCTCTACGGCAACGGCGCCGGTGGAGCTGGCAGCCTGAC
CGGAGCCTCCCTCGGAGGAGTGGGGGGGATGGGAGGAGGGGCGGGGGGAG
CACTGTTTAGGGGGGCGGGCATGGGCACGGGGAATGGAGGGATGCCTGGA
CCGCTTATTCCGGCGCCGCATGAGATCCGGTTCGTGGACCTGGGCATTCC
CTGGCCGGAGCAAGCCCGCGTCCGTTTCTTCGTCATTAAGAGCCTCAACT
ACAAAAATTTGGCGCAGAGTGTACGGAGGGGCGTTTGGCGCACGCACCGC
AACAACGAGCGGACATTGAACGAGGCCTTCCGCACCTGCGACAAGGTCGT
CCTCTTCTTCTCGGTCAACGAGTCGGGCCACTGGCAGGGTGCCGCCGTCA
TGTCCTCCCTCATCCGCTCCCAGCCACACCCGCAACATTTGGCTCCCCTG
CAGCTCCTCCAACACCACCAGGACGGCTGGACTGCAGAGTTCTCCCTGGA
GTGGCTGCGGCTGGTGTCCTTGCCCTTCCCCCACACGCGGCCCCTCCGGA
ACCCCCTCAACGACAACCTCCCCATCTCCCGCTCACGCGATTGCCAGGAG
CTGACCCCCGACATCGGTCGACAACTGCTTTATCTCATCTACGCCTCCGC
TGAGGTTTCTCTGGCCTTGGCCGGCGCCGAGGCCAGCATGCCGCCTGCCG
GAGGTGACGGTGGTGCGGGTGGAGGTCCCTTTGGTTATGGCGGCGGCGGA
CTGATGGATGGGGGAGGAGGAGGAGGCGGAGGTGAAGGAGGGGGAGGGGG
TGGGTTGCAGCAGCAGGAGCAGGAGCAGCAGTACATGAGTGGTGGTGGTG
GAGGAGGAGGAGGAGGAGGAGGAGTGCAACAAGGAGGGGAGACGCGGGGA
GGGGCCTTGGGAGGGGGCGGAATTATCCCGTCTTTCCTGGGCGTGGTTTC
ATCTTCCCCTGCACAGAGTCATGTTTTCACCCACCCTGCCCTCCTTCCTT
CCCTCCCTCCCTCCTTCCCTTGTCTCCAGGAGATGCTGGACGAGTGCTTG
GGCCGTGGTCTCTTCTCTCTGCCGGCCGGCGGGGCCTTGGAAAACTTTGC
GAAAGAGGTGGTGCTCCCCGGCACGACGCTCTTCCTGTCCAACGCCTCGG
ACCGGACCATCTTCGGCATCTTCGAAGCCGTCTCCCCCGTGGCGTACAAT
CTAGAGCGGACAAGCACCAGCACCTCATACCCCGTGCAGGTTCGCATCCG
CTGCGCCCTGGAAGCCCCTCCTCTAACGGAAGCCGACCCGGAAGTACGCT
ATCTCCTCGGTCCTCTCCCTTCCTCCGCTCCACTCGGCCGCGCCGGCCCC
TTGAGCGCCGAACAGACGCAACGCCTTGCCAATCTCCTCGCGGTGCGTGC
CGGGGCCCTTCCTCTCATCCCTCCCTCCACTCCTACATTCACTTCCTCCT
CCGCCTCGTTTTCGTCCTCCTCCTCTTCCACCTCCTCCTCCTCCTTCTCC
TCCTCCTCCTCCCTCTCCTCCTTCCTCCCCCTCCGAAGCGGGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGCTGTTCGCGTCCAACACCTCTTCCTCCG
TCAGCGCCTCGACGAGTCCCGCCTCAACGAATTCCAACAGCCCCGGCAGC
ATCTACCGGCACCTCCCCTCCAACGCCCTCCTTCAGCTACAGCAGCAGCA
GCAGCAACAGCAGCGCCAGCAGCAGCAGCAACAGGAAGGTCGCTTGTTGC
TGGAGGGTTTTGGTGGGGGAGGGCTCGGCAGTGTGAAGGGGTCGTCCACC
GCGACTACCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAACAGCATTGC
GTCCTCCCTCGGTGGCACCTCCGTCGGCTTTTCAGGAGGAAAAGCCGAAT
CTACCCTCGGCAGCAGCCCGGGCGGCAGCAGCAGCTCCCTCATCCTCCCC
CCTCCCTTCGCGGGCGGGGCTCCTCCGGGTATTCAGCTGCCAGCGTCGTG
GCGACCGCTCTGA

Synonyms

Publications