NO09G03900.1, NO09G03900.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G03900.1
Unique Name	NO09G03900.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2361
Alignment location	chr9:1138610..1143296 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:1138610..1143296 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO09G03900.1 vs.
Match: CBJ30073.1 (estExt_Genewise1.C_60040 [Ectocarpus siliculosus])

HSP 1 Score: 334.3 bits (856), Expect = 9.900e-88
Identity = 231/568 (40.67%), Postives = 316/568 (55.63%), Query Frame = 0

Query:  200 SSSLYSVPLAASIALTPCQPSGLDDVDAHLPSALRPSVPPSLAPRAVLLAGPPGVGKTHAVREAVARMEGGREGGREGGRAGGRESTRRKVHVQVVSGGELVDGGEGGVERRLRALFWRAVQATRRKGGSAREPAALAIIFLDEMEALCPASHSSSGTHGGV--SRVAAQLGECLDSL-----PSRLVVVGATNRPHDIHPSLRRAGRLDREIIVCPPTAEERTAILGALLPPFLRSSLPPFLVQVARECVGYVAADLAALVKEGVWELLRERRREGGREGGREGM---------VVGERHLRAAMERVGASVLRGHGVERPSLSFDSIGGQPEAKKRLRQAVLYPSLYPSLMQRFRLTGQGGLLLCGPPGSGKTSLVKAAAASLPGLSFLPFSASDIYSVYVGEAEAAVRRAFALARQAAPCLLFFDELDALLGGSAGETRGGGG----NTAEARVLSTFLNELDGVDVAAGHEGVLVVGATNMPESLDPALLRPGRLSYVIRVLPPQDAQERKAILRVHTRKMPLAAYTEEEEDELLAQAAEATESFSGAELEGLCREAALACLRE 748
            + +L  + L    A TP + +G         + L+P    SL PR VLL GPPGVGKT AVR AV  +          G   G      +V +  ++G E++  G+    + LR  F  A + ++ +GG        A+IFLDE +AL           GG   +R  AQL   +D        S ++VVGATNRP  + P+LRR GR DRE+ + PP  +ER  IL   L     +     +  V+R+CVGYV ADLAAL +E      R +     R  G E           +V   HL  AME+VGAS LRGH V  P   +  IGG  EAK RLRQAV +P ++ +   R  LT   G+LL GPPG  KT+LV+AAA +  G +F+  S +D++S Y+GEAEA +R+AF +AR AAP +LFFDE+DA++       RGGGG    ++AE+RVL+TFL E+DGV    G +GV+VVGATN PE++D ALLRPGR   V+    P++   R+ I  VHTR+M +     + ED    + A  T+  +GAE+EG+CREAA++ +RE
Sbjct:  477 TEALMELMLLPMTATTPAKAAG--------GAELKPL--ESLVPRGVLLTGPPGVGKTFAVRSAVEAVRNAAPRPSFSGTGRGEMDGPFQVRLTTLNGAEILSLGQWEACQALRDAFSAAEEWSKGEGGGRARGNRCAVIFLDEADALLARRDRDGDKAGGGEGARALAQLLTLMDGFRGAEGSSHVIVVGATNRPGALDPALRRPGRFDRELALAPPDVKERADILRHHLMRVKVAGGESTIETVSRKCVGYVGADLAALAREAALLAARTQASRPSRHDGEENRPLAAASKEALVEPEHLSLAMEKVGASSLRGHQVTVPDTPWSDIGGMEEAKARLRQAVEWPVVHKASFDRMGLTPPRGILLFGPPGCSKTTLVRAAATA-AGATFVCLSGADVFSPYLGEAEAEIRQAFRIARNAAPAILFFDEIDAIVC-----NRGGGGKGSASSAESRVLATFLTEMDGVGSLKG-DGVVVVGATNRPEAVDRALLRPGRFDQVVYAPLPEE-NARRQIFEVHTRRMAV-----DREDVDFLRLAGVTKGLTGAEIEGVCREAAMSAIRE 1021

The following BLAST results are available for this feature:

BLAST of NO09G03900.1 vs.

BLAST of NO09G03900.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBJ30073.1	9.900e-88	40.67	estExt_Genewise1.C_60040 [Ectocarpus siliculosus]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO09G03900	NO09G03900	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO09G03900.1	NO09G03900.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO09G03900.1.cds1	NO09G03900.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03900.1.cds2	NO09G03900.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03900.1.cds3	NO09G03900.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03900.1.cds4	NO09G03900.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03900.1.cds5	NO09G03900.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03900.1.cds6	NO09G03900.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03900.1.cds7	NO09G03900.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03900.1.cds8	NO09G03900.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03900.1.cds9	NO09G03900.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03900.1.cds10	NO09G03900.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03900.1.cds11	NO09G03900.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03900.1.cds12	NO09G03900.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03900.1.cds13	NO09G03900.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr9:1138610..1143296-
coding sequence from alignment at chr9:1138610..1143296-

mRNA sequence

>NO09G03900.1 ID=NO09G03900.1|Name=NO09G03900.1|organism=Nannochloropsis oceanica|type=mRNA|length=2361bp
ATGGCGGGGGTCAGGGACGGCGAGGAGGGCCCTGTCACTCAGAAGCCTCC
ACGCTGGAAGATACATGTGTGTAAGCGCGGCTGTCCATTTCCGTCCAACC
TCGGTCCCGTCCTCCTTTCCTCCTCCGCAACCGCACTCCAGCCCTCTCAC
GATACTCCTGTCCAGCTCACGCCCGTGTTCTCAGAGGAACAAGCAGACGT
TTCATTCTTGGTGCGGGTCGTGGTGATGGGAGACAAGGAAGAAGAACGAG
ATGACGCAGTCGAAGAAGGGGAGGGGCTGCGGCGGTATTGCCAGTGTCTA
GCGGGGCAGGTGGGCGAGGACGCCACGCTCCTTCTCCCCTTAGCCCTCGC
TGTTGCTTCTACCTCCATCTCGCCCTCCTCTTCTTCCTCCTTGCCTTCTT
TTTCGACCTTGAGCGCGGACATGAGAGAAATGAGATTAAAAAGGGTGGAA
GAGGTCGTGACGCATTTGGCCTCTCTGCCTGCGTTCAATGCCCTCCTCAC
GCCCCTCCCGGGAGCAGGCGCCGCAAGGCAGGCTGCCTCCCGTGGCCTCC
TTTCCTCCTCTTCCTCCCTTCAGCCCGTGCCCCTCTTTTCCTCCTCCTCC
TCCTCCCTCTACTCCGTGCCCCTTGCCGCCTCCATAGCTCTCACTCCTTG
CCAGCCCTCCGGCCTCGATGATGTAGACGCCCACCTCCCGTCCGCCCTCC
GTCCCTCCGTCCCTCCCTCCCTCGCCCCTCGAGCCGTTCTTCTGGCGGGG
CCGCCGGGCGTGGGCAAGACTCACGCAGTCCGAGAAGCGGTGGCCAGGAT
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGAGGGAGGG
AAAGCACGAGGCGCAAGGTGCACGTGCAAGTGGTCTCTGGTGGAGAGCTG
GTGGACGGAGGGGAGGGAGGGGTGGAACGACGGCTTCGCGCGTTATTTTG
GAGGGCGGTGCAAGCGACGAGGAGGAAAGGCGGAAGTGCCAGAGAGCCGG
CAGCACTGGCCATCATTTTCCTGGACGAGATGGAGGCGCTCTGCCCCGCC
TCTCATTCCTCCTCCGGCACCCACGGCGGGGTCTCCCGTGTCGCAGCCCA
GCTGGGCGAGTGTCTGGACTCCCTCCCCTCCCGCCTCGTGGTCGTAGGGG
CCACCAACAGACCGCACGACATCCACCCGAGCCTGCGACGGGCGGGCAGG
CTCGACAGGGAGATTATTGTCTGCCCGCCCACAGCCGAGGAACGCACCGC
CATTCTAGGTGCCCTCCTCCCTCCCTTCCTCCGTTCCTCCCTCCCTCCCT
TCCTCGTCCAGGTGGCTCGGGAATGCGTGGGCTATGTGGCTGCCGATCTT
GCGGCGCTGGTCAAGGAGGGAGTGTGGGAGCTACTTAGGGAGAGGAGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGATGGTGGTGGGCGAGAGGC
ACTTGAGGGCGGCGATGGAGAGGGTTGGAGCCTCGGTGCTCCGGGGGCAT
GGGGTGGAGCGTCCCTCCCTCTCCTTCGACAGCATCGGAGGGCAGCCGGA
GGCCAAGAAGCGGCTCCGGCAGGCCGTGCTCTACCCCTCCCTCTATCCCT
CCCTCATGCAAAGATTCCGCCTGACGGGCCAGGGGGGGCTCTTGCTTTGT
GGACCGCCCGGGAGCGGGAAGACCAGCCTAGTCAAGGCCGCCGCGGCCTC
CCTCCCGGGTTTGTCGTTTCTGCCATTCTCTGCGAGCGACATCTACAGCG
TGTATGTGGGAGAGGCGGAGGCGGCTGTCAGACGGGCGTTCGCGCTGGCC
AGACAGGCCGCGCCCTGCCTCCTCTTCTTTGACGAGCTGGATGCTCTCTT
GGGCGGTAGTGCCGGGGAAACTCGCGGCGGGGGTGGAAACACGGCCGAGG
CGCGGGTCCTCTCTACTTTTCTGAACGAGCTGGACGGCGTGGACGTGGCG
GCGGGTCACGAGGGCGTGCTGGTGGTGGGCGCCACTAACATGCCCGAGTC
CCTCGATCCTGCCCTCCTTCGACCCGGCCGCCTCTCCTATGTCATCCGCG
TCCTGCCACCTCAGGACGCTCAAGAGCGGAAGGCCATTTTGCGGGTCCAC
ACAAGGAAGATGCCTTTGGCTGCCTACACCGAGGAGGAAGAAGACGAGCT
TTTGGCCCAGGCTGCGGAGGCAACCGAGAGCTTTTCCGGCGCCGAACTCG
AGGGCCTCTGCCGAGAGGCGGCCCTAGCGTGCTTGCGCGAGGAAGAAGAC
GAGTGCTATCAGAAGAGCACGGATGGTCAAGGCCAGGAAGAGGCGGAGAA
GGAGAGAACGGGAAGGATTGGCTGGCGCCATTTTGAGGCCGCGATGCGGA
GACGGCGGTAG

protein sequence of NO09G03900.1

>NO09G03900.1-protein ID=NO09G03900.1-protein|Name=NO09G03900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=787bp
MAGVRDGEEGPVTQKPPRWKIHVCKRGCPFPSNLGPVLLSSSATALQPSH
DTPVQLTPVFSEEQADVSFLVRVVVMGDKEEERDDAVEEGEGLRRYCQCL
AGQVGEDATLLLPLALAVASTSISPSSSSSLPSFSTLSADMREMRLKRVE
EVVTHLASLPAFNALLTPLPGAGAARQAASRGLLSSSSSLQPVPLFSSSS
SSLYSVPLAASIALTPCQPSGLDDVDAHLPSALRPSVPPSLAPRAVLLAG
PPGVGKTHAVREAVARMEGGREGGREGGRAGGRESTRRKVHVQVVSGGEL
VDGGEGGVERRLRALFWRAVQATRRKGGSAREPAALAIIFLDEMEALCPA
SHSSSGTHGGVSRVAAQLGECLDSLPSRLVVVGATNRPHDIHPSLRRAGR
LDREIIVCPPTAEERTAILGALLPPFLRSSLPPFLVQVARECVGYVAADL
AALVKEGVWELLRERRREGGREGGREGMVVGERHLRAAMERVGASVLRGH
GVERPSLSFDSIGGQPEAKKRLRQAVLYPSLYPSLMQRFRLTGQGGLLLC
GPPGSGKTSLVKAAAASLPGLSFLPFSASDIYSVYVGEAEAAVRRAFALA
RQAAPCLLFFDELDALLGGSAGETRGGGGNTAEARVLSTFLNELDGVDVA
AGHEGVLVVGATNMPESLDPALLRPGRLSYVIRVLPPQDAQERKAILRVH
TRKMPLAAYTEEEEDELLAQAAEATESFSGAELEGLCREAALACLREEED
ECYQKSTDGQGQEEAEKERTGRIGWRHFEAAMRRRR*

mRNA from alignment at chr9:1138610..1143296-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO09G03900.1 ID=NO09G03900.1|Name=NO09G03900.1|organism=Nannochloropsis oceanica|type=mRNA|length=4687bp|location=Sequence derived from alignment at chr9:1138610..1143296- (Nannochloropsis oceanica)
ATGGCGGGGGTCAGGGACGGCGAGGAGGGCCCTGTCACTCAGAAGCCTCC
ACGCTGGAAGATACATGTGTGTAAGCGCGGCTGTCCATTTCCGTCCAACC
TCGGTCCCGTCCTCCTTTCCTCCTCCGCAACCGCACTCCAGCCCTCTCAC
GATACTCCTGTCCAGCTCACGCCCGTGTTCTCAGAGGAACAAGCAGACGT
TTCATTCTTGGTGCGGGTCGTGGTGATGGGAGACAAGGAAGAAGAACGAG
ATGACGCAGTCGAAGAAGGGGAGGGGCTGCGGCGGTATTGCCAGTGTCTA
GCGGGGCAGGTGGGCGAGGACGCCACGCTCCTTCTCCCCTTAGCCCTCGC
TGTTGCTTCTACCTCCATCTCGCCCTCCTCTTCTTCCTCCTTGCCTTCTT
TTTCGACCTTGAGCGCGGACATGAGAGAAATGAGATTAAAAAGGGTGGAA
GAGGTCGTGACGCATTTGGCCTCTCTGCCTGCGTTCAATGCCCTCCTCAC
GCCCCTCCCGGGAGCAGGCGCCGCAAGGTAAGAAAATGAAGAAGAGGGGG
TGATGGAATGGGATCGAATATCGAAATCCGACTCCTTTTTCCTTATTTCC
TCTCATTTTCCGAGTTTTCCTCCTGATGATCCGACTCACAATCTCCTCTA
ACACACGTGTATCCGTCCATCTAATCGCAGGCAGGCTGCCTCCCGTGGCC
TCCTTTCCTCCTCTTCCTCCCTTCAGCCCGTGCCCCTCTTTTCCTCCTCC
TCCTCCTCCCTCTACTCCGTGCCCCTTGCCGCCTCCATAGCTCTCACTCC
TTGCCAGCCCTCCGGCCTCGATGATGTAGACGTATCTCTGACCCCCACTC
CCTTGTCGCCCTCCGTCCTCCCCCTCCTCCGCCCCCTCCTTCTTCATGCC
ATCCTCCCCTCCCCCTCTCCTCCCTCCTCCTCATCCTCTTTCCCTTGCCA
TACCTTCATCCTTTTCCGCCTCAATGGCCACACGCGACACCGCCCAGGTG
ACCGTGGAAGAGGGAAAGGAGGGAGGAGATGGTCTTCCTTGGAGCTTACC
CGCACCACACCCTCGAGCTGCTCCTTTGTGTGGGTTGGGAAGGAAACACG
CCTCGTCGCCCTTCCTCCCCCCTTCCTCCCTCCCTGTCTCCCTCCCTCCC
TCCCCCTTCTTCTTCTGCTGCTGAAGAGGGCGGAAAGGGATACGACCGTC
CTTCCCCCCCTTCCTCCCTCCCTACCTCCCCCTCTTCGCCATCCTCCTCC
TGCTCGCGTCTCACCGACACTCTCTGCGAGATTCTGCAGGCCCACCTCCC
GTCCGCCCTCCGTCCCTCCGTCCCTCCCTCCCTCGCCCCTCGAGCCGTTC
TTCTGGCGGGGCCGCCGGGCGTGGGCAAGACTCACGCAGTCCGAGAAGCG
GTGGCCAGGATGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGC
GGGAGGGAGGGAAAGCACGAGGCGCAAGGTGCACGTGCAAGTGGTCTCTG
GTGGAGAGCTGGTGGACGGAGGGGAGGGAGGGGTGGAACGACGGCTTCGC
GCGTTATTTTGGAGGGCGGTGCAAGCGACGAGGAGGAAAGGCGGAAGTGC
CAGAGAGGTGCGTCTTTTCTTCGGTGTCTTCCTTCCCTTCCTTCCCTTAT
TCCCTCCCTCCCTCCCTCCGTTCCCTGCCGAGGCCACAGCTTATTTTCCT
CCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTAGCCGGCAGCACTGGCCA
TCATTTTCCTGGACGAGATGGAGGCGCTCTGCCCCGCCTCTCATTCCTCC
TCCGGCACCCACGGCGGGGTAGGAAAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGAAAGGGTTCTTACTATCTTGAGGTCTGCCCATGGCGGCCTG
GTTGTCTTACCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTC
TCCAGGTCTTCCCCATCGCAGCCTCGCGTTTGCATCTCCCTGGACGCCCT
CGATGCTCACGCGTGTATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGG
TCTCCCGTGTCGCAGCCCAGCTGGGCGAGTGTCTGGACTCCCTCCCCTCC
CGCCTCGTGGTCGTAGGGGCCACCAACAGACCGCACGACATCCACCCGAG
CCTGCGACGGGCGGGCAGGCTCGACAGGGAGGTGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGCTGAGGTTCTGTGGCAATTTTCGCTTCCTG
CAGACTTTCGTCTTCACTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGCAG
ATTATTGTCTGCCCGCCCACAGCCGAGGAACGCACCGCCATTCTAGGTGC
CCTCCTCCCTCCCTTCCTCCGTTCCTCCCTCCCTCCCTTCCTCGTCCAGG
TGGCTCGGGAATGCGTGGGCTATGTGGCTGCCGATCTTGCGGCGCTGGTC
AAGGAGGGAGTGTGGGAGCTACTTAGGGAGAGGAGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGGATGGTGGTGGGCGAGAGGCACTTGAGGGCGG
CGATGGAGAGGGTTGGAGCCTCGGTGCTCCGGGGGCATGGGGTGGAGGTA
GGGAGGGAGGGAGGCAGGGAGGAAGGGAAGGAGGGAGGGAGGGGGAAGAG
AAAGAGAGAGGGAGGTAAGCCGATTTGACTCTCGTTTTTCCTATTACTTC
CAAACACCCCTTCCTCCCTTTGCCCCTCCTTCCCCACCTCCCTTCCTCCC
CTTCTCACTTCCTCCCTCCCCTCCTCCCTCTCTCCCCTCCTCCCTCCCTC
CCTCCCTCCCCTCTCCTCCAGCGTCCCTCCCTCTCCTTCGACAGCATCGG
AGGGCAGCCGGAGGCCAAGAAGCGGCTCCGGCAGGCCGTGCTCTACCCCT
CCCTCTATCCCTCCCTCATGCAAAGATTCCGCCTGACGGGCCAGGGGGGG
CTCTTGCTTTGTGGACCGCCCGGGAGCGGGAAGACCAGCCTAGGTGAGGA
AGTAAGGAAGGAAGGGGGGGAGGGACCGAGGGGAGAAAGGAAGGAAGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGAGTAGCGGTGTAGGATACACGT
GTTGGTCGTGTCCTGACAAGCACCCCCCTCCCTCCCTCCCTCCCTCCCTC
CCTTCCTAGTCAAGGCCGCCGCGGCCTCCCTCCCGGGTTTGTCGTTTCTG
CCATTCTCTGCGAGCGACATCTACAGCGTGTATGTGGGAGAGGCGGAGGC
GGCTGTCAGACGGGCGTTCGCGCTGGCCAGACAGGTAGGGGGCGAGGGAG
GGAGAGGGAGGGAGGGAGGGAGATGGGGAGGGAGAGAAGATGATTGGACA
TATGTATGCTTACTCCAGTCGTTTAAATTCAGACGTTCCCTCCTTCCTCC
CTCCCTTTCTCTCCTTCCCTCCCTCCCTCCCTCCCTAGGCCGCGCCCTGC
CTCCTCTTCTTTGACGAGCTGGATGCTCTCTTGGGCGGTAGTGCCGGGGA
AACTCGCGGCGGGGGTGGAAACACGGCCGAGGCGCGGGTACGTGCCTTCC
CTCCCTTCCTCCCTCCCTACCTACCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCCGCCTGCCTGTCTTCCTACATGGGTGGGTTTTGACCTCCTCCCCCTC
TCCCCCCGCCGTTTCCATTAGCACGCTCCACGCCACACCGCTTATCCACC
CACCCTCCCTTCCTCCCTCCCTCCCGCCCTCAGGTCCTCTCTACTTTTCT
GAACGAGCTGGACGGCGTGGACGTGGCGGCGGGTCACGAGGGCGTGCTGG
TGGTGGGCGCCACTAACATGCCCGAGGTAGGGAGCGAGGAAGGGAGGGAG
GGAAGGAGAGAGGAATGACGAAGCGATGCTCCCGCGGCAGGGAGGGACAC
GAGCGAGAACCTGTTTTCTCTGCCATACACTCACCCACTCTCTTCAACTC
CTCCCTCCCTCTCTCAGTCCCTCGATCCTGCCCTCCTTCGACCCGGCCGC
CTCTCCTATGTCATCCGCGTCCTGCCACCTCAGGACGCTCAAGAGCGGAA
GGCCATTTTGCGGGTCCACACAAGGAAGGTAAGAGCAGGAGGAGGGAAGG
AGGGAAGGAGGGTAGAATACAGGAAGGAACGTGAGGCATCTCTAAATAAA
ACGCCAACCAGCCGGCCCCTCTTCCCACGCCCTGCCCGTCTCTCGTTGTC
CTTCCATTTCCACCTATCACATCTCTGACTTCAAACGACAAAGATGCCTT
TGGCTGCCTACACCGAGGAGGAAGAAGACGAGCTTTTGGCCCAGGCTGCG
GAGGCAACCGAGAGCTTTTCCGGCGCCGAACTCGAGGGCCTCTGCCGGTA
GGTACCTGTGTTGCTTCATCCATTATCCCCCACCCTTCCTCCTTTCATGT
TTATCGTGCCATCCATCTTTCATCTTTCTCACTCGGTTTCTCCATCCTTC
TCGTGATCAATTCCTAATGACTTCTCTCTGTGCAACCAGAGAGGCGGCCC
TAGCGTGCTTGCGCGAGGAAGAAGACGAGTGCTATCAGAAGAGCACGGAT
GGTCAAGGCCAGGAAGAGGCGGAGAAGGAGAGAACGGGAAGGATTGGCTG
GCGCCATTTTGAGGCCGCGATGCGGAGACGGCGGTAG

Coding sequence (CDS) from alignment at chr9:1138610..1143296-

>NO09G03900.1 ID=NO09G03900.1|Name=NO09G03900.1|organism=Nannochloropsis oceanica|type=CDS|length=2361bp|location=Sequence derived from alignment at chr9:1138610..1143296- (Nannochloropsis oceanica)
ATGGCGGGGGTCAGGGACGGCGAGGAGGGCCCTGTCACTCAGAAGCCTCC
ACGCTGGAAGATACATGTGTGTAAGCGCGGCTGTCCATTTCCGTCCAACC
TCGGTCCCGTCCTCCTTTCCTCCTCCGCAACCGCACTCCAGCCCTCTCAC
GATACTCCTGTCCAGCTCACGCCCGTGTTCTCAGAGGAACAAGCAGACGT
TTCATTCTTGGTGCGGGTCGTGGTGATGGGAGACAAGGAAGAAGAACGAG
ATGACGCAGTCGAAGAAGGGGAGGGGCTGCGGCGGTATTGCCAGTGTCTA
GCGGGGCAGGTGGGCGAGGACGCCACGCTCCTTCTCCCCTTAGCCCTCGC
TGTTGCTTCTACCTCCATCTCGCCCTCCTCTTCTTCCTCCTTGCCTTCTT
TTTCGACCTTGAGCGCGGACATGAGAGAAATGAGATTAAAAAGGGTGGAA
GAGGTCGTGACGCATTTGGCCTCTCTGCCTGCGTTCAATGCCCTCCTCAC
GCCCCTCCCGGGAGCAGGCGCCGCAAGGCAGGCTGCCTCCCGTGGCCTCC
TTTCCTCCTCTTCCTCCCTTCAGCCCGTGCCCCTCTTTTCCTCCTCCTCC
TCCTCCCTCTACTCCGTGCCCCTTGCCGCCTCCATAGCTCTCACTCCTTG
CCAGCCCTCCGGCCTCGATGATGTAGACGCCCACCTCCCGTCCGCCCTCC
GTCCCTCCGTCCCTCCCTCCCTCGCCCCTCGAGCCGTTCTTCTGGCGGGG
CCGCCGGGCGTGGGCAAGACTCACGCAGTCCGAGAAGCGGTGGCCAGGAT
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGAGGGAGGG
AAAGCACGAGGCGCAAGGTGCACGTGCAAGTGGTCTCTGGTGGAGAGCTG
GTGGACGGAGGGGAGGGAGGGGTGGAACGACGGCTTCGCGCGTTATTTTG
GAGGGCGGTGCAAGCGACGAGGAGGAAAGGCGGAAGTGCCAGAGAGCCGG
CAGCACTGGCCATCATTTTCCTGGACGAGATGGAGGCGCTCTGCCCCGCC
TCTCATTCCTCCTCCGGCACCCACGGCGGGGTCTCCCGTGTCGCAGCCCA
GCTGGGCGAGTGTCTGGACTCCCTCCCCTCCCGCCTCGTGGTCGTAGGGG
CCACCAACAGACCGCACGACATCCACCCGAGCCTGCGACGGGCGGGCAGG
CTCGACAGGGAGATTATTGTCTGCCCGCCCACAGCCGAGGAACGCACCGC
CATTCTAGGTGCCCTCCTCCCTCCCTTCCTCCGTTCCTCCCTCCCTCCCT
TCCTCGTCCAGGTGGCTCGGGAATGCGTGGGCTATGTGGCTGCCGATCTT
GCGGCGCTGGTCAAGGAGGGAGTGTGGGAGCTACTTAGGGAGAGGAGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGATGGTGGTGGGCGAGAGGC
ACTTGAGGGCGGCGATGGAGAGGGTTGGAGCCTCGGTGCTCCGGGGGCAT
GGGGTGGAGCGTCCCTCCCTCTCCTTCGACAGCATCGGAGGGCAGCCGGA
GGCCAAGAAGCGGCTCCGGCAGGCCGTGCTCTACCCCTCCCTCTATCCCT
CCCTCATGCAAAGATTCCGCCTGACGGGCCAGGGGGGGCTCTTGCTTTGT
GGACCGCCCGGGAGCGGGAAGACCAGCCTAGTCAAGGCCGCCGCGGCCTC
CCTCCCGGGTTTGTCGTTTCTGCCATTCTCTGCGAGCGACATCTACAGCG
TGTATGTGGGAGAGGCGGAGGCGGCTGTCAGACGGGCGTTCGCGCTGGCC
AGACAGGCCGCGCCCTGCCTCCTCTTCTTTGACGAGCTGGATGCTCTCTT
GGGCGGTAGTGCCGGGGAAACTCGCGGCGGGGGTGGAAACACGGCCGAGG
CGCGGGTCCTCTCTACTTTTCTGAACGAGCTGGACGGCGTGGACGTGGCG
GCGGGTCACGAGGGCGTGCTGGTGGTGGGCGCCACTAACATGCCCGAGTC
CCTCGATCCTGCCCTCCTTCGACCCGGCCGCCTCTCCTATGTCATCCGCG
TCCTGCCACCTCAGGACGCTCAAGAGCGGAAGGCCATTTTGCGGGTCCAC
ACAAGGAAGATGCCTTTGGCTGCCTACACCGAGGAGGAAGAAGACGAGCT
TTTGGCCCAGGCTGCGGAGGCAACCGAGAGCTTTTCCGGCGCCGAACTCG
AGGGCCTCTGCCGAGAGGCGGCCCTAGCGTGCTTGCGCGAGGAAGAAGAC
GAGTGCTATCAGAAGAGCACGGATGGTCAAGGCCAGGAAGAGGCGGAGAA
GGAGAGAACGGGAAGGATTGGCTGGCGCCATTTTGAGGCCGCGATGCGGA
GACGGCGGTAG

Synonyms

Publications