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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr9 | genome | chr9:1088434..1091990 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO09G03800.1 vs.
Match: XP_003973183.1 (PREDICTED: sulfite oxidase, mitochondrial [Takifugu rubripes]) HSP 1 Score: 536.2 bits (1380), Expect = 1.300e-148 Identity = 291/568 (51.23%), Postives = 366/568 (64.44%), Query Frame = 0
Query: 38 TRTAPFGLSHIRTSSTRAAVVASL-SSSSDHGWEGRRM------KAALALGLSLTAAGIAGSMTSPAQAEAAAVAEKE-----YTKADVQAHKTKETGVWVTYQGGVYDITQFAENHPGGNKILMAAGGPVEPYWNLYAVHKDPEVQKTIQEILGELRIGTLKHSPDDEKE---VDLDDPYAHEPERHPAFKINTLKPFNAEPPGSLLVDNFITPNALFFKRNHLPVPDIKEEDYLLEVSVEDGKSFKLTLEDLKRDFPHHKVTTTMQCAGNRRALIHQVKHVKGLSWTGFAISTAEWTGVRLRDVLLWAGVPEDYDEVGLAHVHFVGLDTDMSKQTYEASIPINKALDRRGDVLLAFEMNGEPIPRDHGYPVRAVVPGTVGARNVKWVGKVLASKTESQGFWQQRDYKNFSPSTDWENVDFDRAPAIQDMPIQSAIAA-IEGGLEEGGDDEEEGVGSLTIKGYAYSGGGRGVARVDISIDGGKTWEVADIKQG-GWKHGDYARTWTWALWEHHVPEAKLKGLEEADICVKATDTSYNVQPERIEPYWNLRGVLANSWARQKVPLRRE 589
TR PF R + A+ L SSS G EG+R K AL ++ T A +A S+ + EK +T+ DV H+T E GVWVTY+GGVYDIT+F HPGG+KIL+AAGG +EP+W+LYAVH Q+ + EIL E ++G L S +D K+ V DPY+ +P RHPA ++N+LKPFNAEPP +L D++ITP+A+FFKRNHLPVP + Y L + G L+LEDLK FP H VT T+QCAGNRR+ +++VK VKGL+W AIS A W+G +LRDVLL AG D + HV F GLD D+S TY ASIP+NKA+ GDVLLA+EMNGE +P DHG+PVR VVPGTVGARNVKW+GKV S ES WQQ DYK FSP TDW+ VDF APAIQ++PIQSAI A +GG+ E +E +T+KGYA+SGGGR V RVD+S+DGGKTW+VA +K G R W W LWE P +E +I KA D SYN+QP+ + P WNLRGVL+N+W R KV + +
Sbjct: 11 TRACPFNTQRHRGAPALASYAFRLWSSSGSSGGEGQRSYLGASWKHALVGLVAGTGAVLAYSLHHHKAEQTETPLEKRSALPIFTQEDVTGHRTLEDGVWVTYKGGVYDITEFVAMHPGGDKILLAAGGALEPFWSLYAVHN----QEHVLEILSEYKVGEL--SAEDLKKQQSVTTSDPYSSDPVRHPALRVNSLKPFNAEPPPEILSDSYITPSAIFFKRNHLPVPQVDPGSYRLYIEGLPGGVLTLSLEDLKTKFPKHTVTATLQCAGNRRSEMNKVKQVKGLNWGIAAISNATWSGAKLRDVLLAAGYGPDVAKWA-RHVQFEGLDKDVSGTTYGASIPLNKAVSEEGDVLLAYEMNGEDLPADHGFPVRVVVPGTVGARNVKWLGKVTVSAEESGSHWQQNDYKGFSPGTDWDTVDFKSAPAIQELPIQSAITAPADGGVVERSSEE------VTVKGYAWSGGGREVVRVDVSLDGGKTWQVAQLKDGENEAPPPPGRAWAWKLWEVQAPLP--PEAQELEIICKAVDNSYNMQPDSVPPIWNLRGVLSNAWHRVKVKITED 563
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO09G03800.1 ID=NO09G03800.1|Name=NO09G03800.1|organism=Nannochloropsis oceanica|type=mRNA|length=1879bp AATTCACAGGCTGCCCAACAGCGCAGCATGCTACGTCGCGTTGCTGTCCG CCTGTCGGCCGCGGCGGTGCGTGGGGCGGAACGCCGTCTCCACAACAATA GTAGCAACGCCTACACCAACTTCATCACTCCTTCGAGGACGCGGACTGCG CCATTTGGACTGTCACACATCCGCACTTCCAGCACTAGGGCAGCCGTCGT GGCATCACTTTCCTCCTCGTCCGATCACGGGTGGGAAGGGAGAAGGATGA AGGCGGCGTTGGCACTTGGCCTGTCGCTCACGGCCGCTGGGATTGCTGGT AGTATGACGTCGCCGGCACAGGCCGAGGCGGCGGCAGTAGCAGAGAAAGA GTACACCAAGGCGGACGTACAGGCCCATAAGACGAAGGAAACGGGTGTGT GGGTCACGTATCAGGGAGGGGTTTATGACATAACGCAATTTGCGGAGAAT CATCCAGGCGGCAATAAGATATTAATGGCAGCGGGTGGCCCCGTGGAGCC CTATTGGAACCTTTACGCCGTGCATAAAGACCCGGAGGTGCAGAAAACCA TTCAGGAAATTCTTGGGGAGCTCCGCATTGGCACCCTCAAACACAGTCCC GACGACGAGAAGGAGGTGGATCTGGATGATCCGTATGCCCACGAGCCCGA GCGCCACCCGGCCTTTAAAATTAACACCCTCAAGCCCTTTAATGCCGAGC CGCCGGGGTCCCTGCTGGTGGATAACTTCATCACGCCCAACGCCCTCTTC TTCAAGAGAAACCACCTCCCCGTGCCCGACATCAAGGAAGAGGACTACCT GCTTGAGGTATCGGTGGAAGACGGCAAATCCTTCAAGCTCACCCTCGAGG ACTTGAAACGCGACTTTCCTCACCATAAGGTGACCACCACGATGCAGTGT GCCGGCAACAGGCGCGCGCTTATACACCAAGTCAAGCACGTCAAGGGCCT GTCTTGGACCGGCTTTGCCATTTCTACCGCGGAATGGACGGGCGTTAGAC TTAGGGACGTGTTGCTCTGGGCAGGCGTTCCCGAGGACTACGACGAGGTG GGCTTGGCCCATGTGCACTTCGTTGGCTTGGACACGGACATGTCGAAACA GACATATGAGGCCTCCATCCCCATTAATAAGGCCCTGGATCGACGGGGGG ACGTGTTGCTCGCCTTTGAGATGAACGGCGAACCCATCCCACGCGATCAC GGCTACCCTGTCCGTGCGGTCGTGCCCGGCACTGTCGGCGCGCGCAACGT CAAGTGGGTCGGAAAAGTCCTTGCCAGCAAGACCGAGTCCCAGGGCTTCT GGCAGCAACGGGACTACAAGAACTTCTCCCCATCCACGGACTGGGAGAAT GTCGACTTCGACAGGGCGCCCGCCATCCAGGACATGCCCATCCAAAGCGC CATCGCCGCCATCGAGGGCGGGCTGGAGGAAGGGGGGGACGACGAGGAGG AAGGAGTGGGATCCCTCACCATCAAGGGCTACGCCTACAGCGGGGGGGGG CGAGGCGTCGCGCGCGTGGACATTTCCATCGACGGGGGCAAGACTTGGGA GGTGGCGGACATCAAGCAGGGGGGATGGAAGCACGGAGATTACGCCCGCA CCTGGACCTGGGCCCTATGGGAGCACCACGTGCCCGAGGCCAAACTGAAG GGCTTGGAGGAGGCCGATATCTGCGTCAAGGCGACCGATACCTCGTATAA CGTTCAACCGGAGAGAATTGAGCCGTATTGGAACCTCAGGGGCGTGTTGG CCAATAGTTGGGCACGTCAGAAAGTGCCGTTGAGGAGGGAGGCCGCCTAA GAGGAGGGAGGGGAGGTATGTAGGGGAGTCTGATTGATTGAGTGTAATAA AGAAAACCGGGTCGATTATTGCTAGACAC back to topprotein sequence of NO09G03800.1 >NO09G03800.1-protein ID=NO09G03800.1-protein|Name=NO09G03800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=591bp MLRRVAVRLSAAAVRGAERRLHNNSSNAYTNFITPSRTRTAPFGLSHIRT SSTRAAVVASLSSSSDHGWEGRRMKAALALGLSLTAAGIAGSMTSPAQAE AAAVAEKEYTKADVQAHKTKETGVWVTYQGGVYDITQFAENHPGGNKILM AAGGPVEPYWNLYAVHKDPEVQKTIQEILGELRIGTLKHSPDDEKEVDLD DPYAHEPERHPAFKINTLKPFNAEPPGSLLVDNFITPNALFFKRNHLPVP DIKEEDYLLEVSVEDGKSFKLTLEDLKRDFPHHKVTTTMQCAGNRRALIH QVKHVKGLSWTGFAISTAEWTGVRLRDVLLWAGVPEDYDEVGLAHVHFVG LDTDMSKQTYEASIPINKALDRRGDVLLAFEMNGEPIPRDHGYPVRAVVP GTVGARNVKWVGKVLASKTESQGFWQQRDYKNFSPSTDWENVDFDRAPAI QDMPIQSAIAAIEGGLEEGGDDEEEGVGSLTIKGYAYSGGGRGVARVDIS IDGGKTWEVADIKQGGWKHGDYARTWTWALWEHHVPEAKLKGLEEADICV KATDTSYNVQPERIEPYWNLRGVLANSWARQKVPLRREAA* back to topmRNA from alignment at chr9:1088434..1091990+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO09G03800.1 ID=NO09G03800.1|Name=NO09G03800.1|organism=Nannochloropsis oceanica|type=mRNA|length=3557bp|location=Sequence derived from alignment at chr9:1088434..1091990+ (Nannochloropsis oceanica) AATTCACAGGCTGCCCAACAGCGCAGCATGCTACGTCGCGTTGCTGTCCG
CCTGTCGGCCGCGGCGGTGCGTGGGGCGGAACGCCGTCTCCACAACAATA
GTAGCAACGCCTACACCAACTTCATCACTCCTTCGAGGACGCGGACTGCG
CCATTTGGACTGTCACACATCCGCACTTCCAGCACTAGGGCAGCCGTCGT
GGCATCACTTTCCTCCTCGTCCGATCACGGGTGGGAAGGGAGAAGGATGA
AGGCGGCGTTGGCACTTGGCCTGTCGCTCACGGCCGCTGGGATTGCTGGT
AGTATGACGTCGCCGGCACAGGCCGAGGCGGCGGCAGTAGCAGAGAAAGA
GTACACCAAGGCGGACGTACAGGCCCATAAGACGAAGGAAACGGGTGTGT
GGGTCACGTATCAGGGAGGGGTTTATGACATAACGCAATTTGCGGAGAAT
CATCCAGGTAGAGGACGAGTGGGAGGAGGGAGGGAGGGAGGGTGGGAAGG
AGAGAGTTATGTGGGCCCACCGACAGCTTATCTCTTTGCTGAGGCATACA
CACCATACGTACACTTCCTTCTTACTATACTTGAAGGCGGCAATAAGATA
TTAATGGCAGCGGGTGGCCCCGTGGAGCCCTATTGGAACCTTTACGCCGT
GCATAAAGACCCGGAGGTATGTCCTCCCTCCCTCCTTCCCTCCTTTCTCG
CAACCCGTGTACTTATTCATACTTCTCTTCATCATTTATTTTCCCTGACG
CTTTACAGGTGCAGAAAACCATTCAGGAAATTCTTGGGGAGCTCCGCATT
GGCACCCTCAAACACAGTCCCGACGTAAGCCTACCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCGTCACTCACTCACTCACTCGCTATCGTTTGACC
CGAATCTCCATCGTTTTAATCTTGGTTTTGTACATCTGCTTCTCCCTCTG
TTCTTCTGGAGAGTGGCCTGCGTTCACACAAAGCTCCCCTGCCGCTGACG
AGCTGTACCTCGCTTACCGCTCCCTCCCTCCCTCCCTCCCTTCCCAGGAC
GAGAAGGAGGTGGATCTGGATGATCCGTATGCCCACGAGCCCGAGCGCCA
CCCGGCCTTTAAAATTAACACCCTCAAGCCCTTTAATGCCGAGCCGCCGG
GGTCCCTGCTGGTAGGGAGGGAGGGAAGGAGTGAGGGAGGGAGGGAGGGT
GGGAGGGAGGGTGGGAGGGAGGGGCTAGAATTCGAAACGGTATGCACGCA
CCCATTTTCATTGCTTTCTCACCCGCTCTTCCCCCCCTCCCTCGTCTCCC
TTGCTGCCATTGGATCGCGTCGTGTCGGCTGGACAGGTGGATAACTTCAT
CACGCCCAACGCCCTCTTCTTCAAGAGAAACCACCTCCCCGTGCCCGACA
TCAAGGAAGAGGACTACCTGCTTGAGGTACGCCTTCGCTCGCCCGCCTTC
TATCCCTTCCTCCCTCCTTTGCCTCACCCCTCGCCCTCCCTTTCTTCCCG
CCCATTATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGTC
CCAGGTATCGGTGGAAGACGGCAAATCCTTCAAGCTCACCCTCGAGGACT
TGAAACGCGACTTTCCTCACGTACGTATGCGGCAGATGGGAGGGAAGGAG
GGAGGAAAGGAGGAAAGCACACGTCCTGATGCCTCCCCCTCCCCAGCATA
AGGTGACCACCACGATGCAGTGTGCCGGCAACAGGCGCGCGCTTATACAC
CAAGTCAAGCACGTACGTACCCCCCCCCCTCTCCCCTCCCTCCCTCTTTC
TACACACACACACACACACACACACACACACACACACAGGTCAAGGGCCT
GTCTTGGACCGGCTTTGCCATTTCTACCGCGGAATGGACGGGCGTTAGAC
TTAGGGACGTGTTGCTCTGGGCAGGTGGGTCCGCCCTCCCTTCCTCCCTC
CCTCCCTCCCTCCCTTCCTCCCTTCCTCCCTTCCTCCCTTCCTCCCTTCC
TCCCTTCCTCCCTTCCTCCCTTCCCTCCTTCCTTCCTTCCTCCCTCCCCC
CTTCCTTCCTTTCCATGTATCTGGGCAGGGGCATCACGTCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCCTCCCAGGCGTT
CCCGAGGACTACGACGAGGTGGGCTTGGCCCATGTGCACTTCGTTGGCTT
GGACACGGACATGTCGAAACAGACATATGAGGCCTCCATCCCCATTAATA
AGGCCCTGGATCGACGGGGGGACGTGTTGCTCGCCTTTGAGATGAACGGC
GAACCCATCCCACGGTATTGTCTCTCTTCCTCCCTCCCACCCTCGCTCTC
CCCTCCTTCTTCCTGCTTGGGAGGCCTGCGTGGCTCCTCCTCTTCTCAAG
CAGCCCCTCCCTCCCTCCCTCCCTCCCCCCTTCCCCTCCTCAGCGATCAC
GGCTACCCTGTCCGTGCGGTCGTGCCCGGCACTGTCGGCGCGCGCAACGT
CAAGTGGGTCGGAAAAGTCCTTGCCAGCAAGACGTACGTCCCCCTCCCTC
CCTCCCTATCTCCCTCCCTCTCTCTTACCCTCCACAGCCCCTGCTCACCC
TCTCTCCCTCCCCCCTCAGCGAGTCCCAGGGCTTCTGGCAGCAACGGGAC
TACAAGAACTTCTCCCCATCCACGGACTGGGAGAATGTCGACTTCGACAG
GGCGCCCGCCATCCAGGTAGGGAGGGAGGGAGGGAGGGAGGGGCAGTGAA
AGCAGAACCGACTTGTTCGAATTGGACCCGCTTAGTATGCGATTGTTGTT
TATTGATTCTTTGACACTGTCCTCCCCTCCCCCTCCCTTTCCCTCCCTCT
ATCCCTCCCTCCCTCCGTCCATCTTTGCAGGACATGCCCATCCAAAGCGC
CATCGCCGCCATCGAGGGCGGGCTGGAGGAAGGGGGGGACGACGAGGAGG
AAGGAGTGGGATCCCTCACCATCAAGGGCTACGCCTACAGCGGGGGGGGG
CGAGGCGTCGCGCGCGTGGACATTTCCATCGACGGGGGCAAGACTTGGGA
GGTGGCGGACATCAAGCAGGGGGGATGGAAGCACGGTAATGCTAGGAGAG
AGGAAGGGACAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGATTGATAGAG
AGCTATCATATAATGGGTTGTCTGGCTTTCTCTTCCATCCCCCATTCAAC
TTTCCCCCCCTCCATGTTTCTCGTCTTCCCCCCCCCCCCCTCCCTCCCTC
TCTCCTTCTGCAGGAGATTACGCCCGCACCTGGACCTGGGCCCTATGGGA
GCACCACGTGCCCGAGGCCAAACTGAAGGGCTTGGAGGAGGCCGATATCT
GCGTCAAGGCGACCGATACCTCGTATAACGTTCAACCGGAGAGAATTGAG
CCGTATTGGAACCTCAGGGGCGTGTTGGCCAATAGTTGGGCACGTCAGAA
AGTGCCGTTGAGGAGGGAGGCCGCCTAAGAGGAGGGAGGGGAGGTATGTA
GGGGAGTCTGATTGATTGAGTGTAATAAAGAAAACCGGGTCGATTATTGC
TAGACAC back to topCoding sequence (CDS) from alignment at chr9:1088434..1091990+ >NO09G03800.1 ID=NO09G03800.1|Name=NO09G03800.1|organism=Nannochloropsis oceanica|type=CDS|length=1773bp|location=Sequence derived from alignment at chr9:1088434..1091990+ (Nannochloropsis oceanica) ATGCTACGTCGCGTTGCTGTCCGCCTGTCGGCCGCGGCGGTGCGTGGGGC GGAACGCCGTCTCCACAACAATAGTAGCAACGCCTACACCAACTTCATCA CTCCTTCGAGGACGCGGACTGCGCCATTTGGACTGTCACACATCCGCACT TCCAGCACTAGGGCAGCCGTCGTGGCATCACTTTCCTCCTCGTCCGATCA CGGGTGGGAAGGGAGAAGGATGAAGGCGGCGTTGGCACTTGGCCTGTCGC TCACGGCCGCTGGGATTGCTGGTAGTATGACGTCGCCGGCACAGGCCGAG GCGGCGGCAGTAGCAGAGAAAGAGTACACCAAGGCGGACGTACAGGCCCA TAAGACGAAGGAAACGGGTGTGTGGGTCACGTATCAGGGAGGGGTTTATG ACATAACGCAATTTGCGGAGAATCATCCAGGCGGCAATAAGATATTAATG GCAGCGGGTGGCCCCGTGGAGCCCTATTGGAACCTTTACGCCGTGCATAA AGACCCGGAGGTGCAGAAAACCATTCAGGAAATTCTTGGGGAGCTCCGCA TTGGCACCCTCAAACACAGTCCCGACGACGAGAAGGAGGTGGATCTGGAT GATCCGTATGCCCACGAGCCCGAGCGCCACCCGGCCTTTAAAATTAACAC CCTCAAGCCCTTTAATGCCGAGCCGCCGGGGTCCCTGCTGGTGGATAACT TCATCACGCCCAACGCCCTCTTCTTCAAGAGAAACCACCTCCCCGTGCCC GACATCAAGGAAGAGGACTACCTGCTTGAGGTATCGGTGGAAGACGGCAA ATCCTTCAAGCTCACCCTCGAGGACTTGAAACGCGACTTTCCTCACCATA AGGTGACCACCACGATGCAGTGTGCCGGCAACAGGCGCGCGCTTATACAC CAAGTCAAGCACGTCAAGGGCCTGTCTTGGACCGGCTTTGCCATTTCTAC CGCGGAATGGACGGGCGTTAGACTTAGGGACGTGTTGCTCTGGGCAGGCG TTCCCGAGGACTACGACGAGGTGGGCTTGGCCCATGTGCACTTCGTTGGC TTGGACACGGACATGTCGAAACAGACATATGAGGCCTCCATCCCCATTAA TAAGGCCCTGGATCGACGGGGGGACGTGTTGCTCGCCTTTGAGATGAACG GCGAACCCATCCCACGCGATCACGGCTACCCTGTCCGTGCGGTCGTGCCC GGCACTGTCGGCGCGCGCAACGTCAAGTGGGTCGGAAAAGTCCTTGCCAG CAAGACCGAGTCCCAGGGCTTCTGGCAGCAACGGGACTACAAGAACTTCT CCCCATCCACGGACTGGGAGAATGTCGACTTCGACAGGGCGCCCGCCATC CAGGACATGCCCATCCAAAGCGCCATCGCCGCCATCGAGGGCGGGCTGGA GGAAGGGGGGGACGACGAGGAGGAAGGAGTGGGATCCCTCACCATCAAGG GCTACGCCTACAGCGGGGGGGGGCGAGGCGTCGCGCGCGTGGACATTTCC ATCGACGGGGGCAAGACTTGGGAGGTGGCGGACATCAAGCAGGGGGGATG GAAGCACGGAGATTACGCCCGCACCTGGACCTGGGCCCTATGGGAGCACC ACGTGCCCGAGGCCAAACTGAAGGGCTTGGAGGAGGCCGATATCTGCGTC AAGGCGACCGATACCTCGTATAACGTTCAACCGGAGAGAATTGAGCCGTA TTGGAACCTCAGGGGCGTGTTGGCCAATAGTTGGGCACGTCAGAAAGTGC CGTTGAGGAGGGAGGCCGCCTAA back to top
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