NO09G03690.1, NO09G03690.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G03690.1
Unique NameNO09G03690.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1530
Alignment locationchr9:1063259..1064936 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1063259..1064936 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO09G03690.1 vs.
Match: XP_005854579.1 (rna (guanine-9-)-methyltransferase domain-containing protein 2 [Nannochloropsis gaditana CCMP526]; EKU21779.1 rna (guanine-9-)-methyltransferase domain-containing protein 2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 367.5 bits (942), Expect = 6.100e-98
Identity = 233/456 (51.10%), Postives = 308/456 (67.54%), Query Frame = 0 
Query:   18 DEDEDLPFPPFP-----PSPLPSPPRALASSTKTISTNISKPFLLFSHVVLLIMPLILGLLLFCFMQRLPPTSPLHILEPFLLLLLLLLLLLLLLLLPFVLRILTTLSSLTSSLTAPPRLSRAEKKAVKYANAKQRLRYTRQKYHRKKSQIYKELTEEEQTDVKARMMARKKERKERFTALLAVDAGWLKKRKESRRTKREAR-------EMAKREEEEGVVDREYRSDDDFS----SFPFSLPPHLRLALDLHYGESIHGLRGTRSLTQQVGWCYHSLKCASSFHNTPVFHITSFHGLTAEMLKGSGIHNWPIYRHEEELPAVFPRESIVYLSPDAEEVLEGPLDLSKVYVIGGIVDRTVVRGISQEVATRWQIKSARLPLEYLNLKSKQATAALNVDTVVKVMMDVHANGGDWPRALEGCVPKRKAVEKSKRELKREKRGREERGK--EEEGKE 456
            +E+E  PFPP       PSPLPSP   + +S    S     P        L+++P ++ ++ +          P +   P LL L+  + LL       V R  ++ +  ++ L+   RL++A+KKA+KYANAK+RL++TRQKYHRKKSQIYKELTEEE+  VKA ++AR++ER  RF A+LAVDA WL+ R++    ++           M    E +   + + R +   +    SFP SLP HLR+ALDLHYGE IHG+RGTRSLTQQVGWCYH+LK ASSF NTP+FH+TSF G TA++L+GSG+HNWPIYRH   +  VFPR SIVYL+PDA++VL  PLDLSKVYVIGGIVDRTVVRG+S + A  W++++ARLPLE L+LK+K+A+ ALNVDTV+KV+M VHAN GDW  AL  C+PKRKA  +SKRE KR++ G  E G+   E+ KE
Sbjct:   23 NEEESPPFPPLDSLPQVPSPLPSPASPVMASHILKSVRPKNPL-----EKLVLLPSVV-MISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLS------VSRFASSFNLFSAPLSQ--RLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTADVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSKVYVIGGIVDRTVVRGVSAQAAKEWEVETARLPLELLDLKAKKASRALNVDTVLKVLMSVHANKGDWRAALTECLPKRKAAARSKREEKRDREGPGEGGRSGNEQDKE 464
The following BLAST results are available for this feature:
BLAST of NO09G03690.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_005854579.16.100e-9851.10rna (guanine-9-)-methyltransferase domain-containi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03690NO09G03690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G03690.1NO09G03690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G03690.1.cds1NO09G03690.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G03690.1.cds2NO09G03690.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G03690.1 ID=NO09G03690.1|Name=NO09G03690.1|organism=Nannochloropsis oceanica|type=mRNA|length=1530bp
AAAAAATAGGCACGGAAGCAACGGTACCATCAATCATTTCCTTCCATGGC
ATTTTACCCGCCAGCCGAGACCCTTCCCCCTTCAACGCAAGACGAGGACG
AGGACGAGGATCTCCCCTTTCCCCCTTTCCCACCATCCCCACTCCCATCA
CCACCACGGGCCCTCGCCTCCTCTACCAAGACCATTTCCACTAACATCTC
CAAGCCTTTTCTGTTATTCTCTCATGTTGTCCTTCTTATTATGCCTCTCA
TTCTCGGCCTGTTGCTCTTCTGCTTTATGCAGCGACTGCCACCAACCTCC
CCCTTGCACATCCTCGAACCATTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCCCTTCGTCCTCCGCATTCTCACCACGC
TCTCCTCTTTGACCTCCAGTCTCACTGCGCCTCCCCGCTTGAGCAGGGCC
GAAAAAAAAGCCGTCAAGTACGCCAATGCCAAGCAACGGCTTCGATACAC
GCGACAAAAATACCACCGGAAAAAGTCGCAAATTTACAAGGAGCTCACGG
AGGAGGAGCAGACAGATGTGAAGGCAAGAATGATGGCGAGAAAGAAGGAA
AGGAAGGAGAGGTTTACGGCTCTGCTTGCGGTGGACGCGGGATGGTTGAA
GAAGAGGAAGGAAAGCAGGAGGACAAAGAGGGAAGCAAGGGAAATGGCCA
AGAGAGAAGAGGAGGAGGGGGTGGTGGATAGGGAGTACAGGTCAGACGAC
GACTTCTCTTCCTTTCCTTTTTCCCTCCCTCCCCACCTCCGTCTCGCCCT
TGACCTTCATTACGGCGAATCCATCCACGGCCTCCGGGGCACCCGCTCCC
TAACCCAGCAGGTCGGATGGTGCTACCATTCCCTCAAATGCGCCTCTTCC
TTCCACAACACCCCCGTATTCCACATTACCTCCTTCCACGGCCTCACTGC
AGAGATGCTCAAGGGCTCCGGGATTCACAATTGGCCCATATATAGACATG
AGGAGGAGCTGCCGGCGGTGTTTCCCCGGGAGAGCATTGTTTATTTGTCG
CCAGACGCGGAGGAAGTCTTGGAGGGGCCTCTGGATCTCTCGAAAGTCTA
CGTCATCGGCGGCATCGTGGACAGGACCGTCGTCCGTGGCATCTCGCAAG
AGGTGGCCACTAGGTGGCAAATAAAATCGGCACGTTTACCTCTCGAATAT
TTGAATTTAAAATCAAAACAAGCAACGGCGGCGTTGAATGTGGATACGGT
GGTCAAGGTGATGATGGATGTGCATGCGAACGGGGGAGACTGGCCGAGGG
CGTTGGAGGGGTGTGTGCCCAAGAGGAAGGCGGTGGAGAAGAGCAAAAGA
GAGCTGAAGCGAGAGAAGAGGGGGAGGGAGGAGAGGGGAAAGGAGGAGGA
GGGGAAGGAGTAATAAGGGGAAGAAGAGAAATAGGTGTACTTTGAAAAGG
GAGGGCAATAATAGAGAGGAATGTGACATAAATAAGAGAAAGCCCCGGTC
GGTCTCAAAATAAAGTGCTTGATAATTGAC
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protein sequence of NO09G03690.1

>NO09G03690.1-protein ID=NO09G03690.1-protein|Name=NO09G03690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=456bp
MAFYPPAETLPPSTQDEDEDEDLPFPPFPPSPLPSPPRALASSTKTISTN
ISKPFLLFSHVVLLIMPLILGLLLFCFMQRLPPTSPLHILEPFLLLLLLL
LLLLLLLLLPFVLRILTTLSSLTSSLTAPPRLSRAEKKAVKYANAKQRLR
YTRQKYHRKKSQIYKELTEEEQTDVKARMMARKKERKERFTALLAVDAGW
LKKRKESRRTKREAREMAKREEEEGVVDREYRSDDDFSSFPFSLPPHLRL
ALDLHYGESIHGLRGTRSLTQQVGWCYHSLKCASSFHNTPVFHITSFHGL
TAEMLKGSGIHNWPIYRHEEELPAVFPRESIVYLSPDAEEVLEGPLDLSK
VYVIGGIVDRTVVRGISQEVATRWQIKSARLPLEYLNLKSKQATAALNVD
TVVKVMMDVHANGGDWPRALEGCVPKRKAVEKSKRELKREKRGREERGKE
EEGKE*
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mRNA from alignment at chr9:1063259..1064936-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G03690.1 ID=NO09G03690.1|Name=NO09G03690.1|organism=Nannochloropsis oceanica|type=mRNA|length=1678bp|location=Sequence derived from alignment at chr9:1063259..1064936- (Nannochloropsis oceanica)
AAAAAATAGGCACGGAAGCAACGGTACCATCAATCATTTCCTTCCATGGC
ATTTTACCCGCCAGCCGAGACCCTTCCCCCTTCAACGCAAGACGAGGACG
AGGACGAGGATCTCCCCTTTCCCCCTTTCCCACCATCCCCACTCCCATCA
CCACCACGGGCCCTCGCCTCCTCTACCAAGACCATTTCCACTAACATCTC
CAAGCCTTTTCTGTTATTCTCTCATGTTGTCCTTCTTATTATGCCTCTCA
TTCTCGGCCTGTTGCTCTTCTGCTTTATGCAGCGACTGCCACCAACCTCC
CCCTTGCACATCCTCGAACCATTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCCCTTCGTCCTCCGCATTCTCACCACGC
TCTCCTCTTTGACCTCCAGTCTCACTGCGCCTCCCCGCTTGAGCAGGGCC
GAAAAAAAAGCCGTCAAGTACGCCAATGCCAAGCAACGGCTTCGATACAC
GCGACAAAAATACCACCGGAAAAAGTCGCAAATTTACAAGGAGCTCACGG
AGGAGGAGCAGACAGATGTGAAGGCAAGAATGATGGCGAGAAAGAAGGAA
AGGAAGGAGAGGTTTACGGCTCTGCTTGCGGTGGACGCGGGATGGTTGAA
GAAGAGGAAGGAAAGCAGGAGGACAAAGAGGGAAGCAAGGGAAATGGCCA
AGAGAGAAGAGGAGGAGGGGGTGGTGGATAGGGAGTACAGGTCAGACGAC
GACTTCTCTTCCTTTCCTTTTTCCCTCCCTCCCCACCTCCGTCTCGCCCT
TGACCTTCATTACGGCGAATCCATCCACGGCCTCCGGGGCACCCGCTCCC
TAACCCAGCAGGTCGGATGGTGCTACCATTCCCTCAAATGCGCCTCTTCC
TTCCACAACACCCCCGTATTCCACATTACCTCCTTCCACGGCCTCACTGC
AGAGATGCTCAAGGGCTCCGGGATTCACAATTGGCCCATATATAGACATG
AGGAGGAGCTGCCGGCGGTGTTTCCCCGGGAGAGCATTGTTTATTTGTCG
CCAGACGCGGAGGAAGTCTTGGAGGGGCCTCTGGATCTCTCGAAAGGTAA
GGGAGGAGCAATTTGTATGAAGAGAGAGAGGGAAAGAGGATACGTCCTGC
GTGTATTTCTACTGCTCTTCTTCGGAAGCACATGGTTATCTTTTGATGCA
TTTCCACTCAGCCCACTTGCTTTCCCTTCCTCCCTGCCCTCCAGTCTACG
TCATCGGCGGCATCGTGGACAGGACCGTCGTCCGTGGCATCTCGCAAGAG
GTGGCCACTAGGTGGCAAATAAAATCGGCACGTTTACCTCTCGAATATTT
GAATTTAAAATCAAAACAAGCAACGGCGGCGTTGAATGTGGATACGGTGG
TCAAGGTGATGATGGATGTGCATGCGAACGGGGGAGACTGGCCGAGGGCG
TTGGAGGGGTGTGTGCCCAAGAGGAAGGCGGTGGAGAAGAGCAAAAGAGA
GCTGAAGCGAGAGAAGAGGGGGAGGGAGGAGAGGGGAAAGGAGGAGGAGG
GGAAGGAGTAATAAGGGGAAGAAGAGAAATAGGTGTACTTTGAAAAGGGA
GGGCAATAATAGAGAGGAATGTGACATAAATAAGAGAAAGCCCCGGTCGG
TCTCAAAATAAAGTGCTTGATAATTGAC
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Coding sequence (CDS) from alignment at chr9:1063259..1064936-

>NO09G03690.1 ID=NO09G03690.1|Name=NO09G03690.1|organism=Nannochloropsis oceanica|type=CDS|length=1368bp|location=Sequence derived from alignment at chr9:1063259..1064936- (Nannochloropsis oceanica)
ATGGCATTTTACCCGCCAGCCGAGACCCTTCCCCCTTCAACGCAAGACGA
GGACGAGGACGAGGATCTCCCCTTTCCCCCTTTCCCACCATCCCCACTCC
CATCACCACCACGGGCCCTCGCCTCCTCTACCAAGACCATTTCCACTAAC
ATCTCCAAGCCTTTTCTGTTATTCTCTCATGTTGTCCTTCTTATTATGCC
TCTCATTCTCGGCCTGTTGCTCTTCTGCTTTATGCAGCGACTGCCACCAA
CCTCCCCCTTGCACATCCTCGAACCATTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCCCTTCGTCCTCCGCATTCTCAC
CACGCTCTCCTCTTTGACCTCCAGTCTCACTGCGCCTCCCCGCTTGAGCA
GGGCCGAAAAAAAAGCCGTCAAGTACGCCAATGCCAAGCAACGGCTTCGA
TACACGCGACAAAAATACCACCGGAAAAAGTCGCAAATTTACAAGGAGCT
CACGGAGGAGGAGCAGACAGATGTGAAGGCAAGAATGATGGCGAGAAAGA
AGGAAAGGAAGGAGAGGTTTACGGCTCTGCTTGCGGTGGACGCGGGATGG
TTGAAGAAGAGGAAGGAAAGCAGGAGGACAAAGAGGGAAGCAAGGGAAAT
GGCCAAGAGAGAAGAGGAGGAGGGGGTGGTGGATAGGGAGTACAGGTCAG
ACGACGACTTCTCTTCCTTTCCTTTTTCCCTCCCTCCCCACCTCCGTCTC
GCCCTTGACCTTCATTACGGCGAATCCATCCACGGCCTCCGGGGCACCCG
CTCCCTAACCCAGCAGGTCGGATGGTGCTACCATTCCCTCAAATGCGCCT
CTTCCTTCCACAACACCCCCGTATTCCACATTACCTCCTTCCACGGCCTC
ACTGCAGAGATGCTCAAGGGCTCCGGGATTCACAATTGGCCCATATATAG
ACATGAGGAGGAGCTGCCGGCGGTGTTTCCCCGGGAGAGCATTGTTTATT
TGTCGCCAGACGCGGAGGAAGTCTTGGAGGGGCCTCTGGATCTCTCGAAA
GTCTACGTCATCGGCGGCATCGTGGACAGGACCGTCGTCCGTGGCATCTC
GCAAGAGGTGGCCACTAGGTGGCAAATAAAATCGGCACGTTTACCTCTCG
AATATTTGAATTTAAAATCAAAACAAGCAACGGCGGCGTTGAATGTGGAT
ACGGTGGTCAAGGTGATGATGGATGTGCATGCGAACGGGGGAGACTGGCC
GAGGGCGTTGGAGGGGTGTGTGCCCAAGAGGAAGGCGGTGGAGAAGAGCA
AAAGAGAGCTGAAGCGAGAGAAGAGGGGGAGGGAGGAGAGGGGAAAGGAG
GAGGAGGGGAAGGAGTAA
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Synonyms
Publications