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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr9 | genome | chr9:1009282..1012683 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO09G03530.2 vs.
Match: EWM27453.1 (acetylornithine deacetylase [Nannochloropsis gaditana]) HSP 1 Score: 575.1 bits (1481), Expect = 1.300e-160 Identity = 268/315 (85.08%), Postives = 294/315 (93.33%), Query Frame = 0
Query: 1 MAADSPDDVQNFLQNLEMNEERYLTLLSKLIGEAEQLQNNPQQGLIPQEKLAADHLLGLLEPHSKEHGGPLIVELIEFTPGRSNLIVKYPGTGDATCAFVGSHMDVVPANPETWDRNPFELTREGDMLYGRGTTDCLGHVALITELLLKIAERKPALKRTLVVVFIANEENGSIVGIGVDGLMKAGALEQIKKGPLFWVDCADSQPCLGTCGMVCWKLKVHGRLFHSGMPHKAVNPIELGTVALQNILKRFYADFPTHPEEAKYNYVVSSSMKPTQMECARGSLNQIPPHATFSGDIRLVPFYEIKDVKAKVERY 316
M SP+DVQ+FL +EMN+ERYLTLL+KLIGEAE LQNNPQQGL+PQE LAA+H+L LLEPHSKE GGPL++E IEFTPGRSNLIVKYPGT +AT AFVGSHMDVVPANPE W+RNPFELTREGDML+GRGTTDCLGHVALITELL++IAE +PALKR+L+VVFIANEEN S+ GIGVDGL+KAGALEQIK GPLFWVDCADSQPCLGTCGMVCWKLKVHGRLFHSG+PHKA+NPIELGTVALQ IL+RFYADFPTH EE+KYNYVVSSSMKPTQ+ECARGSLNQ+PPHATFSGDIR VPFYEIKDVKAKVE Y
Sbjct: 1 MTEASPNDVQSFLHAMEMNDERYLTLLAKLIGEAENLQNNPQQGLVPQENLAANHVLALLEPHSKEKGGPLLIERIEFTPGRSNLIVKYPGTSEATTAFVGSHMDVVPANPEGWERNPFELTREGDMLFGRGTTDCLGHVALITELLVQIAEHRPALKRSLIVVFIANEENSSVPGIGVDGLLKAGALEQIKNGPLFWVDCADSQPCLGTCGMVCWKLKVHGRLFHSGLPHKAINPIELGTVALQEILRRFYADFPTHSEESKYNYVVSSSMKPTQVECARGSLNQVPPHATFSGDIRSVPFYEIKDVKAKVESY 315
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO09G03530.2 ID=NO09G03530.2|Name=NO09G03530.2|organism=Nannochloropsis oceanica|type=mRNA|length=2158bp
ACAGGCAAGACCATCACCACTAAAGGCTCCACCACCAGCAAGCAACATCA
TGGCCGCCGACAGCCCCGACGATGTGCAAAACTTCCTCCAGAACCTGGAG
ATGAACGAAGAACGGTATTTGACCTTGCTTTCCAAGCTCATTGGCGAGGC
GGAGCAGCTGCAAAACAATCCGCAACAGGGCTTGATCCCTCAGGAGAAGC
TCGCCGCTGATCATCTCTTGGGCCTCCTCGAACCCCACAGCAAGGAACAT
GGCGGCCCGCTTATTGTGGAACTCATCGAGTTCACGCCTGGACGCAGCAA
CCTGATTGTGAAGTACCCAGGGACGGGCGATGCTACCTGTGCCTTTGTGG
GAAGCCATATGGATGTGGTGCCTGCCAACCCGGAGACATGGGATCGGAAC
CCTTTCGAGCTGACCCGGGAGGGCGACATGCTCTATGGGCGTGGCACGAC
CGACTGCCTGGGCCACGTGGCCTTAATCACGGAGCTGCTTCTCAAGATCG
CTGAGCGGAAGCCGGCGTTAAAGCGGACGTTGGTGGTGGTCTTTATCGCC
AACGAGGAGAATGGCTCGATCGTGGGCATTGGCGTGGACGGCCTGATGAA
GGCCGGGGCCTTGGAGCAGATCAAGAAGGGCCCGCTTTTTTGGGTGGACT
GCGCGGACTCCCAGCCCTGTCTCGGCACCTGCGGGATGGTTTGCTGGAAG
CTCAAAGTGCACGGCCGGTTGTTCCACAGCGGAATGCCCCACAAGGCCGT
GAACCCCATCGAGCTTGGAACGGTGGCCCTACAAAATATATTGAAGCGGT
TCTACGCCGATTTTCCCACACATCCCGAAGAGGCCAAATATAACTACGTC
GTTTCCTCCTCCATGAAGCCGACGCAGATGGAATGCGCCCGAGGGAGCCT
TAATCAGATCCCGCCCCATGCCACCTTTAGTGGCGATATTCGCCTCGTTC
CTTTCTATGAGATCAAGGACGTCAAGGCCAAGGTGGAGAGGTATAGATGA
AAAAGGGATAGAGTTTGAAGGAGTTATCCAATGTTATCCGTGAAAATATG
TTCTTGGATAGTCACATAAAGCCTTTGTATCTCTTGAACTTCTTCCATAA
TAATTATCTTGTTGCTTCTATTACCTCCCTATCTCCCCATTCCCAAGCTA
CGTCGCGGACCTGAACGCAAACATTAGCAGCCTCCCCTCCCTCGGTCCTG
CCTCCGGCTATGTCGTTTCGTCCGAAGACCCTCCCATCCAGGGAAAGCTC
GAGTTGGAGTGGATCGGGGAAGGCGAGAACGGCATTGCGGTGAAACTCGG
CACGGACGGCAACCAGGCGCTGACCCAGGCAACGGAAGACGTGCTCGGCT
CAGTGATTCCTTACTCGATCACAGGCTCCTTGCCGTTGGTCCGGTATTTG
CAGGACAACGACTTTGATGTTCAGTTGGTGGGGTATGGCAAGAGTTCCAA
GTATCACGCAGACAATGAGGCAGCAGACCTAAAGGACTTCAAGCAGGCGA
TTAAGATCTTGGCAAGGGTCATGGCGCGATTGGAGATGGCGTAAGTGTGA
GTGGAGTAAAGAAAATTAAGGATAAAAACGGGTTGGACAGGAGTGAAAAA
GAAAGGAGTTGGAGGTTGGTGGAGATTGGGGCTGTACGTGAATCTCGACA
AGATGATCAGAATTTACTCCCCAGATGATCCCAGAGCTTCGAAAACGTGA
AAGATGAGTATGGGATGAATGCTGAGGAAAATTAAGAGCATAAATGGGGA
GGAGGAATCTGGAGAAACAATCCGATACAGTTAACTAGATGGTCCATGTC
GATCTCGCGAAAAACCTAATGCAATCTAAGCAACATCTCCACGCGGATTG
CGTCGCCGTGATTGTGATGACGATGGGTATTGTAGTCGTGGCGATGCCCT
GAATAAAATGCGTATATGGTGAGAGTTTGCAGTTAATAAACGCTCGCGGA
GGAGTTAAGGCGTTGTCAATGTTGCGATGGGCCGCTGTTTCATGCAACAG
CCACAGCCTGCCACACTACTATAAGTAAGAGAGTTGTAAATTGTTTCTTT
CATTCACATATGCAACATGTGCTTTTCAGCATGCATTTTCGGCATACTCG
AGCTGCCAACGTCCCCCCCTACTTTAACCTCCCCATCCGTTAATCCGTTG
TCGCGTTG back to topprotein sequence of NO09G03530.2 >NO09G03530.2-protein ID=NO09G03530.2-protein|Name=NO09G03530.2|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp
MAADSPDDVQNFLQNLEMNEERYLTLLSKLIGEAEQLQNNPQQGLIPQEK
LAADHLLGLLEPHSKEHGGPLIVELIEFTPGRSNLIVKYPGTGDATCAFV
GSHMDVVPANPETWDRNPFELTREGDMLYGRGTTDCLGHVALITELLLKI
AERKPALKRTLVVVFIANEENGSIVGIGVDGLMKAGALEQIKKGPLFWVD
CADSQPCLGTCGMVCWKLKVHGRLFHSGMPHKAVNPIELGTVALQNILKR
FYADFPTHPEEAKYNYVVSSSMKPTQMECARGSLNQIPPHATFSGDIRLV
PFYEIKDVKAKVERYR* back to topmRNA from alignment at chr9:1009282..1012683- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO09G03530.2 ID=NO09G03530.2|Name=NO09G03530.2|organism=Nannochloropsis oceanica|type=mRNA|length=3402bp|location=Sequence derived from alignment at chr9:1009282..1012683- (Nannochloropsis oceanica)
ACAGGCAAGACCATCACCACTAAAGGCTCCACCACCAGCAAGCAACATCA
TGGCCGCCGACAGCCCCGACGATGTGCAAAAGTAAGCAGCGCAATCCTTT
CTACCCCCCCCCTCCTCTTTCCCCTTCCTTCCTCACTCCTTCCTCACTCC
ACCCCCAAAAGCTTCCTCCAGAACCTGGAGATGAACGAAGAACGGTATTT
GACCTTGCTTTCCAAGCTCATTGGCGAGGCGGAGCAGCTGCAAAACAATC
CGCAACAGGGCTTGATCCCTCAGGAGAAGCTCGCCGCTGATCATCTCTTG
GGCCTCCTCGAACCCCACAGCAAGGAACATGGTGAGGGCAGTCACATGAT
CCTGCGCACTGGCCTGAATTTTTCCTCCTTTTTCGGCATCCTTATTTGAC
GTTGAGTTCCGCTCGTTTTAAGACGGCTTCGCCCACATTCCCTTCATTCT
CATCATCCTCTTCCATCTTCCCTGTCCCCCCCTTCTTCACTTCACCAGGC
GGCCCGCTTATTGTGGAACTCATCGAGTTCACGCCTGGACGCAGCAACCT
GATTGTGAAGTACCCAGGGACGGGCGATGCTACCTGTGCCTTTGTGGGAA
GCCATATGGATGTGGTGAGGAGGAAGGATGGAAGGGAGGGAGGAAAGAGA
GGGGGGGATACGACACATATTACGCGTCAGCAGCATTTCATCTAATTCGT
AGCATAAGCTTATTTCTTCCATTCCTTCCTCTTTCTATTATTACCCCAAC
CTGCGTCAAGGTGCCTGCCAACCCGGAGACATGGGATCGGAACCCTTTCG
AGCTGACCCGGGAGGGCGACATGCTCTATGGGCGTGGCACGACCGACTGC
CTGGGCCACGTGGCCTTAATCACGGAGCTGCTTCTCAAGGTAATGAAGGA
GGAGGAGCATCAGAAAGGGGGCCAATGCTTGGAAAAGGGAAAAATGAGTG
GCGTGTGCATGTCAGAAGTCTCATCACCGCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTCCACTCAG
ATCGCTGAGCGGAAGCCGGCGTTAAAGCGGACGTTGGTGGTGGTCTTTAT
CGCCAACGAGGAGAATGGCTCGATCGTGGGCATTGGCGTGGACGGCCTGA
TGAAGGCCGGGGCCTTGGAGCAGATCAAGAAGGGCCCGCTTTTTTGGGTA
TGTGTATATATTTGTATGTGTATATGCATATATGCGTATACTTGTATGTT
TGTGTGTGTACGTGTATGCATGGAGCCTTGGAGCAGATTAAGAAGGGCCG
TTTTTTGGGGGTATGTGTTCATATAAATCTAATTGTATGTGTACATGTAT
GTATATATGTGTGAATCTAAGTATGTATATATGTATTTATGTATGCCTGG
TCGCATGTGTGTACGTATGCGATATCATATGTGTTTCAGGGAGTGTTTGT
GGTTATCCTTGTCTTTCTCTTCTCGTCTTCAATTGATGGTTTCTCTTTTC
TTTCCTCCTCCTTCTCTGCCTCTATATTCTGTCCCTCTCCTCCATAGGTG
GACTGCGCGGACTCCCAGCCCTGTCTCGGCACCTGCGGGATGGTTTGCTG
GAAGCTCAAAGTGCACGGCCGGTTGTTCCACAGCGGAATGCCCCACAAGG
TCAGGGAACACAGGGGGGTTAGAGTAGAATCAGAATCTAAAACACCGAAC
AAGCACTCCAAATAAGTGACATATGTACACCTGTGTGGGTTCCCTCCTTC
CTCCTTCCCTTCTTCCCTTCCTCCATCCCTCCTTTGCATCAGGCCGTGAA
CCCCATCGAGCTTGGAACGGTGGCCCTACAAAATATATTGAAGCGGTTCT
ACGCCGATTTTCCCACACATCCCGAAGAGGCCAAATATAACTACGTCGTT
TCCTCCTCCATGAAGCCGACGCAGGTAATCTCTACTAGCTTTTCTTTCCT
CCTTCCGTGCCTGCATCCCTCCCTTCCTTCCTCAACTGTATCCATAAAAT
GAAGTCTACAATTATCCGAATAGTAGGACTCGAAAAGGCTGTGCACACCT
GCACTGCTCACTGTTCCCGTCTCCTTTCCTTCTTCGTTCCACTCATCCTC
CCTCCTTTTCTTCTGCTGCAGATGGAATGCGCCCGAGGGAGCCTTAATCA
GATCCCGCCCCATGCCACCTTTAGTGGCGATATTCGCCTCGTTCCTTTCT
ATGAGATCAAGGACGTCAAGGCCAAGGTGGAGAGGTATAGATGAAAAAGG
GATAGAGTTTGAAGGAGTTATCCAATGTTATCCGTGAAAATATGTTCTTG
GATAGTCACATAAAGCCTTTGTATCTCTTGAACTTCTTCCATAATAATTA
TCTTGTTGCTTCTATTACCTCCCTATCTCCCCATTCCCAAGCTACGTCGC
GGACCTGAACGCAAACATTAGCAGCCTCCCCTCCCTCGGTCCTGCCTCCG
GCTATGTCGTTTCGTCCGAAGACCCTCCCATCCAGGGAAAGCTCGAGTTG
GAGTGGATCGGGGAAGGCGAGAACGGCATTGCGGTGAAACTCGGCACGGA
CGGCAACCAGGCGCTGACCCAGGCAACGGAAGACGTGCTCGGCTCAGTGA
TTCCTTACTCGATCACAGGCTCCTTGCCGTTGGTCCGGTATTTGCAGGAC
AACGACTTTGATGTTCAGTTGGTGGGGTATGGCAAGAGTTCCAAGTATCA
CGCAGACAATGAGGCAGCAGACCTAAAGGACTTCAAGCAGGCGATTAAGA
TCTTGGCAAGGGTCATGGCGCGATTGGAGATGGCGTAAGTGTGAGTGGAG
TAAAGAAAATTAAGGATAAAAACGGGTTGGACAGGAGTGAAAAAGAAAGG
AGTTGGAGGTTGGTGGAGATTGGGGCTGTACGTGAATCTCGACAAGATGA
TCAGAATTTACTCCCCAGATGATCCCAGAGCTTCGAAAACGTGAAAGATG
AGTATGGGATGAATGCTGAGGAAAATTAAGAGCATAAATGGGGAGGAGGA
ATCTGGAGAAACAATCCGATACAGTTAACTAGATGGTCCATGTCGATCTC
GCGAAAAACCTAATGCAATCTAAGCAACATCTCCACGCGGATTGCGTCGC
CGTGATTGTGATGACGATGGGTATTGTAGTCGTGGCGATGCCCTGAATAA
AATGCGTATATGGTGAGAGTTTGCAGTTAATAAACGCTCGCGGAGGAGTT
AAGGCGTTGTCAATGTTGCGATGGGCCGCTGTTTCATGCAACAGCCACAG
CCTGCCACACTACTATAAGTAAGAGAGTTGTAAATTGTTTCTTTCATTCA
CATATGCAACATGTGCTTTTCAGCATGCATTTTCGGCATACTCGAGCTGC
CAACGTCCCCCCCTACTTTAACCTCCCCATCCGTTAATCCGTTGTCGCGT
TG back to topCoding sequence (CDS) from alignment at chr9:1009282..1012683- >NO09G03530.2 ID=NO09G03530.2|Name=NO09G03530.2|organism=Nannochloropsis oceanica|type=CDS|length=951bp|location=Sequence derived from alignment at chr9:1009282..1012683- (Nannochloropsis oceanica)
ATGGCCGCCGACAGCCCCGACGATGTGCAAAACTTCCTCCAGAACCTGGA
GATGAACGAAGAACGGTATTTGACCTTGCTTTCCAAGCTCATTGGCGAGG
CGGAGCAGCTGCAAAACAATCCGCAACAGGGCTTGATCCCTCAGGAGAAG
CTCGCCGCTGATCATCTCTTGGGCCTCCTCGAACCCCACAGCAAGGAACA
TGGCGGCCCGCTTATTGTGGAACTCATCGAGTTCACGCCTGGACGCAGCA
ACCTGATTGTGAAGTACCCAGGGACGGGCGATGCTACCTGTGCCTTTGTG
GGAAGCCATATGGATGTGGTGCCTGCCAACCCGGAGACATGGGATCGGAA
CCCTTTCGAGCTGACCCGGGAGGGCGACATGCTCTATGGGCGTGGCACGA
CCGACTGCCTGGGCCACGTGGCCTTAATCACGGAGCTGCTTCTCAAGATC
GCTGAGCGGAAGCCGGCGTTAAAGCGGACGTTGGTGGTGGTCTTTATCGC
CAACGAGGAGAATGGCTCGATCGTGGGCATTGGCGTGGACGGCCTGATGA
AGGCCGGGGCCTTGGAGCAGATCAAGAAGGGCCCGCTTTTTTGGGTGGAC
TGCGCGGACTCCCAGCCCTGTCTCGGCACCTGCGGGATGGTTTGCTGGAA
GCTCAAAGTGCACGGCCGGTTGTTCCACAGCGGAATGCCCCACAAGGCCG
TGAACCCCATCGAGCTTGGAACGGTGGCCCTACAAAATATATTGAAGCGG
TTCTACGCCGATTTTCCCACACATCCCGAAGAGGCCAAATATAACTACGT
CGTTTCCTCCTCCATGAAGCCGACGCAGATGGAATGCGCCCGAGGGAGCC
TTAATCAGATCCCGCCCCATGCCACCTTTAGTGGCGATATTCGCCTCGTT
CCTTTCTATGAGATCAAGGACGTCAAGGCCAAGGTGGAGAGGTATAGATG
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