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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr9 | genome | chr9:823255..825474 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO09G02780.1 vs.
Match: EWM27527.1 (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 949.9 bits (2454), Expect = 4.700e-273 Identity = 490/701 (69.90%), Postives = 564/701 (80.46%), Query Frame = 0
Query: 25 VLLLLPLHGATFFLSSSSQYHRRSPPSPQHHRHSYPLH--ATTDEILTAT---APKPTPDLCIFDAPKAVRLAAFSFATYGDPTGSRWLRLPDGTDLGFQSDDLVRNNFKSLLLVHILQARNLPEERGGLIERALSGFSCDPYVITAVNNSWGADIAITKAKSANSNPDFFQRFFLYVEDPNTTDLELTVKDKNLLKGDDVIGHCLVPLTQLLDGSKGEGAPGQEGVMEWAGTLQIESVHKDFKDAGTIDVELQLVPLNGEAVNKVEYDSNDQDVAESDADGSGSKHGKFSARGPKSVLEGIDWNELGARVGGVARGLGRYQFACFLTNEETDTQGGIWFDAKAKEIIVSFRGTQMEWKDLLTDMAIYQEGLDGPEDPRLVHAGFRRAFRSIQGGVLQALNFIASNLVEDGWSIDVCGHSLGGALACLMAHEIDRRMPALVEEGRLNVFSFGAPRVGNTAFCEDYDKRLKNQSFRIVNGLDVVARMPRGSGESSLLMEYSHCGRTVLLTETEDGRFSVWVEGESEGTCPLKEGEAFTSTTPTSQSMAEIIKKAAIEAMERGKGGLEFETPFSKATFANGTAASVQEMLRAAGNFTNLQAMLSSTSSIDYFSSFTSIPSS-PSLGPFGQLSLQTDLQQIANAVFGSAMNSTATIGKSLGLNETFVDSELSLIRGLVYGDALAHHMEPLYYVALEKAFGIAME 720
VLLL P +FF ++ Y PP HR L A D+ L A+ + + P FDAPKAVRLAAFSFA YG P+GSRWLRL DGTDLGFQSDDLVRNNFKSLLLVHILQARNLPEE+GGL+E+ALSG CDPYV++AVNNSWGAD+AIT AK+ANSNPDFFQRFFLYVEDP T L LTVKD+NLLKGDDVIG C VPL +LL+ G+ P +G++EW+G L IES + K +GTI++ELQLVPL+G AV+K + + +D D+ K + GPKSVLEGIDWNELG+RVGGVA GLGRYQFACFLTNEETDTQGGIW+D KAKEII+SFRGTQMEWKDLLTDMAIYQEGLDGP+D RLVHAGFRRAFRSI+GGV+QAL FIA +L+ DGW++DVCGHSLGGALACLMA+E+DRRMPAL E GRL+V+SFGAPRVGNTAFC++YD RLK +FRIVNGLD+VARMPRG+G S++LMEY+HCGRTVLLTETE+G+F VWVEGESEG CPLKEG+AF STT S S AI +G LEF+ P SKATF+NGT ASVQEMLRAAGN TNL+AMLS S D +SF+ PSS P GPFGQLSLQTDL Q+ANAVFG+A+NSTA IGKSLGLNETF+DSEL+LI+GLVYG+ALAHHMEPLYY+ALEKAFG AM+
Sbjct: 10 VLLLQPF-AYSFFPAARQHY----PPHRDLHRREPCLSFSAFIDDSLKASEHPSDELPPKSYFFDAPKAVRLAAFSFAAYGKPSGSRWLRLSDGTDLGFQSDDLVRNNFKSLLLVHILQARNLPEEQGGLLEKALSGSGCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQRFFLYVEDPTTASLNLTVKDRNLLKGDDVIGSCQVPL-RLLEEKIGDDVPPAQGILEWSGILDIESAVPNTKSSGTIEIELQLVPLDGNAVDKDDRNLDDPDI-------ENMKSITLTPTGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGTQMEWKDLLTDMAIYQEGLDGPDDRRLVHAGFRRAFRSIRGGVVQALQFIAPDLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLDIVARMPRGTGRSAVLMEYNHCGRTVLLTETEEGQFRVWVEGESEGVCPLKEGDAFASTTDKSVS-----DLRAIAMKGKGDKELEFQLPISKATFSNGTTASVQEMLRAAGNLTNLEAMLSFKPSTDILASFSGSPSSWPPSGPFGQLSLQTDLFQVANAVFGTALNSTAFIGKSLGLNETFIDSELNLIKGLVYGEALAHHMEPLYYLALEKAFGAAMK 692
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO09G02780.1 ID=NO09G02780.1|Name=NO09G02780.1|organism=Nannochloropsis oceanica|type=mRNA|length=2220bp
ATGGACTCCACCACACTACACTATAACACAGGCACCGTCATAGTAATGGG
GGCTTCTGTCTTACGCAGACTGGTGCTGCTTTTACTGCCGCTGCATGGAG
CAACTTTCTTCCTTTCCAGCAGCAGCCAGTATCATCGTCGCTCACCACCA
AGCCCGCAGCACCATCGACACTCTTATCCACTGCACGCCACTACCGACGA
AATACTCACCGCCACCGCCCCTAAGCCCACGCCTGACCTCTGCATCTTTG
ATGCTCCCAAGGCCGTTCGCCTGGCCGCCTTTTCCTTTGCTACTTACGGA
GATCCCACTGGCTCCCGATGGCTGCGTCTGCCCGACGGCACTGACCTTGG
CTTCCAATCTGATGACTTGGTGCGCAACAACTTTAAAAGTTTGCTGTTGG
TTCACATCCTGCAAGCCCGCAACCTGCCAGAAGAACGGGGCGGGCTTATT
GAGAGGGCTCTCTCAGGCTTTAGCTGCGACCCCTACGTCATCACGGCCGT
CAACAATTCGTGGGGTGCAGATATCGCCATCACTAAGGCCAAGAGTGCTA
ATTCCAATCCCGATTTTTTCCAGCGCTTTTTCTTGTACGTGGAAGATCCC
AACACAACGGATCTAGAGCTAACTGTCAAGGATAAGAACCTGCTGAAAGG
CGATGATGTTATTGGGCACTGTCTGGTGCCCTTGACGCAGCTGCTCGACG
GGTCAAAAGGAGAGGGCGCACCTGGTCAAGAAGGCGTGATGGAGTGGGCG
GGGACCTTGCAAATCGAAAGCGTGCACAAGGATTTTAAGGATGCTGGCAC
CATTGACGTAGAGCTGCAGCTGGTGCCCTTGAATGGAGAGGCCGTGAACA
AGGTCGAATACGACTCCAATGACCAGGACGTCGCCGAGAGCGACGCCGAT
GGCAGTGGCAGCAAGCATGGTAAATTCAGTGCACGGGGTCCGAAAAGTGT
GCTTGAAGGCATTGATTGGAATGAGCTGGGCGCCCGTGTCGGTGGAGTGG
CCAGGGGGCTGGGCCGCTACCAGTTTGCCTGCTTTCTGACCAACGAGGAG
ACCGATACGCAGGGGGGAATCTGGTTTGATGCCAAAGCCAAGGAGATCAT
TGTCTCCTTCCGAGGCACGCAGATGGAATGGAAGGATTTGCTGACTGACA
TGGCGATCTATCAAGAAGGGTTGGATGGGCCTGAGGACCCGCGGTTGGTG
CACGCGGGCTTTCGACGTGCTTTTCGTTCTATTCAAGGCGGGGTCCTACA
GGCCTTGAATTTTATAGCTTCCAATTTGGTGGAGGATGGATGGTCTATAG
ACGTGTGTGGGCACTCCTTAGGGGGGGCACTGGCGTGCTTGATGGCCCAC
GAGATCGATCGGCGCATGCCTGCCTTGGTAGAGGAAGGGAGGCTGAATGT
TTTTTCCTTTGGGGCGCCAAGGGTGGGTAACACGGCGTTTTGTGAGGACT
ATGACAAGCGGCTTAAAAACCAGAGCTTTCGAATAGTGAATGGGTTGGAC
GTTGTTGCGCGAATGCCACGAGGGTCGGGTGAATCTTCCCTATTGATGGA
ATACAGTCATTGCGGGCGCACGGTACTACTGACCGAGACAGAAGACGGTC
GATTTAGTGTATGGGTGGAGGGCGAAAGTGAAGGCACTTGCCCACTCAAA
GAAGGAGAGGCATTTACGAGCACGACGCCTACGAGTCAATCCATGGCGGA
GATTATCAAGAAGGCCGCAATAGAAGCGATGGAGAGAGGGAAGGGAGGTC
TTGAGTTTGAAACTCCATTTAGCAAGGCAACCTTTGCGAACGGTACAGCT
GCCTCAGTGCAAGAAATGCTGCGGGCCGCCGGAAACTTTACAAACCTTCA
AGCTATGCTCTCCTCTACGTCCTCCATCGACTACTTCTCCTCTTTCACCT
CCATTCCTTCCTCGCCTTCTCTGGGGCCATTTGGACAGCTGAGCTTGCAA
ACGGATTTGCAGCAAATCGCCAATGCAGTGTTTGGAAGCGCGATGAACTC
GACAGCTACGATTGGCAAGAGCTTGGGGTTGAATGAGACGTTTGTAGATA
GTGAGTTGAGTTTAATTCGAGGGTTGGTGTACGGAGATGCATTAGCCCAC
CATATGGAGCCGCTTTATTATGTTGCGCTTGAGAAAGCGTTTGGGATTGC
GATGGAGGAAGGGGTGGATGACAAGAAAGGGGAAGAGAAGGGGGATGGTG
CAACGAAGAAGTACGGATAA back to topprotein sequence of NO09G02780.1 >NO09G02780.1-protein ID=NO09G02780.1-protein|Name=NO09G02780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=740bp
MDSTTLHYNTGTVIVMGASVLRRLVLLLLPLHGATFFLSSSSQYHRRSPP
SPQHHRHSYPLHATTDEILTATAPKPTPDLCIFDAPKAVRLAAFSFATYG
DPTGSRWLRLPDGTDLGFQSDDLVRNNFKSLLLVHILQARNLPEERGGLI
ERALSGFSCDPYVITAVNNSWGADIAITKAKSANSNPDFFQRFFLYVEDP
NTTDLELTVKDKNLLKGDDVIGHCLVPLTQLLDGSKGEGAPGQEGVMEWA
GTLQIESVHKDFKDAGTIDVELQLVPLNGEAVNKVEYDSNDQDVAESDAD
GSGSKHGKFSARGPKSVLEGIDWNELGARVGGVARGLGRYQFACFLTNEE
TDTQGGIWFDAKAKEIIVSFRGTQMEWKDLLTDMAIYQEGLDGPEDPRLV
HAGFRRAFRSIQGGVLQALNFIASNLVEDGWSIDVCGHSLGGALACLMAH
EIDRRMPALVEEGRLNVFSFGAPRVGNTAFCEDYDKRLKNQSFRIVNGLD
VVARMPRGSGESSLLMEYSHCGRTVLLTETEDGRFSVWVEGESEGTCPLK
EGEAFTSTTPTSQSMAEIIKKAAIEAMERGKGGLEFETPFSKATFANGTA
ASVQEMLRAAGNFTNLQAMLSSTSSIDYFSSFTSIPSSPSLGPFGQLSLQ
TDLQQIANAVFGSAMNSTATIGKSLGLNETFVDSELSLIRGLVYGDALAH
HMEPLYYVALEKAFGIAMEEGVDDKKGEEKGDGATKKYG* back to topmRNA from alignment at chr9:823255..825474- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO09G02780.1 ID=NO09G02780.1|Name=NO09G02780.1|organism=Nannochloropsis oceanica|type=mRNA|length=2220bp|location=Sequence derived from alignment at chr9:823255..825474- (Nannochloropsis oceanica)
ATGGACTCCACCACACTACACTATAACACAGGCACCGTCATAGTAATGGG
GGCTTCTGTCTTACGCAGACTGGTGCTGCTTTTACTGCCGCTGCATGGAG
CAACTTTCTTCCTTTCCAGCAGCAGCCAGTATCATCGTCGCTCACCACCA
AGCCCGCAGCACCATCGACACTCTTATCCACTGCACGCCACTACCGACGA
AATACTCACCGCCACCGCCCCTAAGCCCACGCCTGACCTCTGCATCTTTG
ATGCTCCCAAGGCCGTTCGCCTGGCCGCCTTTTCCTTTGCTACTTACGGA
GATCCCACTGGCTCCCGATGGCTGCGTCTGCCCGACGGCACTGACCTTGG
CTTCCAATCTGATGACTTGGTGCGCAACAACTTTAAAAGTTTGCTGTTGG
TTCACATCCTGCAAGCCCGCAACCTGCCAGAAGAACGGGGCGGGCTTATT
GAGAGGGCTCTCTCAGGCTTTAGCTGCGACCCCTACGTCATCACGGCCGT
CAACAATTCGTGGGGTGCAGATATCGCCATCACTAAGGCCAAGAGTGCTA
ATTCCAATCCCGATTTTTTCCAGCGCTTTTTCTTGTACGTGGAAGATCCC
AACACAACGGATCTAGAGCTAACTGTCAAGGATAAGAACCTGCTGAAAGG
CGATGATGTTATTGGGCACTGTCTGGTGCCCTTGACGCAGCTGCTCGACG
GGTCAAAAGGAGAGGGCGCACCTGGTCAAGAAGGCGTGATGGAGTGGGCG
GGGACCTTGCAAATCGAAAGCGTGCACAAGGATTTTAAGGATGCTGGCAC
CATTGACGTAGAGCTGCAGCTGGTGCCCTTGAATGGAGAGGCCGTGAACA
AGGTCGAATACGACTCCAATGACCAGGACGTCGCCGAGAGCGACGCCGAT
GGCAGTGGCAGCAAGCATGGTAAATTCAGTGCACGGGGTCCGAAAAGTGT
GCTTGAAGGCATTGATTGGAATGAGCTGGGCGCCCGTGTCGGTGGAGTGG
CCAGGGGGCTGGGCCGCTACCAGTTTGCCTGCTTTCTGACCAACGAGGAG
ACCGATACGCAGGGGGGAATCTGGTTTGATGCCAAAGCCAAGGAGATCAT
TGTCTCCTTCCGAGGCACGCAGATGGAATGGAAGGATTTGCTGACTGACA
TGGCGATCTATCAAGAAGGGTTGGATGGGCCTGAGGACCCGCGGTTGGTG
CACGCGGGCTTTCGACGTGCTTTTCGTTCTATTCAAGGCGGGGTCCTACA
GGCCTTGAATTTTATAGCTTCCAATTTGGTGGAGGATGGATGGTCTATAG
ACGTGTGTGGGCACTCCTTAGGGGGGGCACTGGCGTGCTTGATGGCCCAC
GAGATCGATCGGCGCATGCCTGCCTTGGTAGAGGAAGGGAGGCTGAATGT
TTTTTCCTTTGGGGCGCCAAGGGTGGGTAACACGGCGTTTTGTGAGGACT
ATGACAAGCGGCTTAAAAACCAGAGCTTTCGAATAGTGAATGGGTTGGAC
GTTGTTGCGCGAATGCCACGAGGGTCGGGTGAATCTTCCCTATTGATGGA
ATACAGTCATTGCGGGCGCACGGTACTACTGACCGAGACAGAAGACGGTC
GATTTAGTGTATGGGTGGAGGGCGAAAGTGAAGGCACTTGCCCACTCAAA
GAAGGAGAGGCATTTACGAGCACGACGCCTACGAGTCAATCCATGGCGGA
GATTATCAAGAAGGCCGCAATAGAAGCGATGGAGAGAGGGAAGGGAGGTC
TTGAGTTTGAAACTCCATTTAGCAAGGCAACCTTTGCGAACGGTACAGCT
GCCTCAGTGCAAGAAATGCTGCGGGCCGCCGGAAACTTTACAAACCTTCA
AGCTATGCTCTCCTCTACGTCCTCCATCGACTACTTCTCCTCTTTCACCT
CCATTCCTTCCTCGCCTTCTCTGGGGCCATTTGGACAGCTGAGCTTGCAA
ACGGATTTGCAGCAAATCGCCAATGCAGTGTTTGGAAGCGCGATGAACTC
GACAGCTACGATTGGCAAGAGCTTGGGGTTGAATGAGACGTTTGTAGATA
GTGAGTTGAGTTTAATTCGAGGGTTGGTGTACGGAGATGCATTAGCCCAC
CATATGGAGCCGCTTTATTATGTTGCGCTTGAGAAAGCGTTTGGGATTGC
GATGGAGGAAGGGGTGGATGACAAGAAAGGGGAAGAGAAGGGGGATGGTG
CAACGAAGAAGTACGGATAA back to topCoding sequence (CDS) from alignment at chr9:823255..825474- >NO09G02780.1 ID=NO09G02780.1|Name=NO09G02780.1|organism=Nannochloropsis oceanica|type=CDS|length=2220bp|location=Sequence derived from alignment at chr9:823255..825474- (Nannochloropsis oceanica)
ATGGACTCCACCACACTACACTATAACACAGGCACCGTCATAGTAATGGG
GGCTTCTGTCTTACGCAGACTGGTGCTGCTTTTACTGCCGCTGCATGGAG
CAACTTTCTTCCTTTCCAGCAGCAGCCAGTATCATCGTCGCTCACCACCA
AGCCCGCAGCACCATCGACACTCTTATCCACTGCACGCCACTACCGACGA
AATACTCACCGCCACCGCCCCTAAGCCCACGCCTGACCTCTGCATCTTTG
ATGCTCCCAAGGCCGTTCGCCTGGCCGCCTTTTCCTTTGCTACTTACGGA
GATCCCACTGGCTCCCGATGGCTGCGTCTGCCCGACGGCACTGACCTTGG
CTTCCAATCTGATGACTTGGTGCGCAACAACTTTAAAAGTTTGCTGTTGG
TTCACATCCTGCAAGCCCGCAACCTGCCAGAAGAACGGGGCGGGCTTATT
GAGAGGGCTCTCTCAGGCTTTAGCTGCGACCCCTACGTCATCACGGCCGT
CAACAATTCGTGGGGTGCAGATATCGCCATCACTAAGGCCAAGAGTGCTA
ATTCCAATCCCGATTTTTTCCAGCGCTTTTTCTTGTACGTGGAAGATCCC
AACACAACGGATCTAGAGCTAACTGTCAAGGATAAGAACCTGCTGAAAGG
CGATGATGTTATTGGGCACTGTCTGGTGCCCTTGACGCAGCTGCTCGACG
GGTCAAAAGGAGAGGGCGCACCTGGTCAAGAAGGCGTGATGGAGTGGGCG
GGGACCTTGCAAATCGAAAGCGTGCACAAGGATTTTAAGGATGCTGGCAC
CATTGACGTAGAGCTGCAGCTGGTGCCCTTGAATGGAGAGGCCGTGAACA
AGGTCGAATACGACTCCAATGACCAGGACGTCGCCGAGAGCGACGCCGAT
GGCAGTGGCAGCAAGCATGGTAAATTCAGTGCACGGGGTCCGAAAAGTGT
GCTTGAAGGCATTGATTGGAATGAGCTGGGCGCCCGTGTCGGTGGAGTGG
CCAGGGGGCTGGGCCGCTACCAGTTTGCCTGCTTTCTGACCAACGAGGAG
ACCGATACGCAGGGGGGAATCTGGTTTGATGCCAAAGCCAAGGAGATCAT
TGTCTCCTTCCGAGGCACGCAGATGGAATGGAAGGATTTGCTGACTGACA
TGGCGATCTATCAAGAAGGGTTGGATGGGCCTGAGGACCCGCGGTTGGTG
CACGCGGGCTTTCGACGTGCTTTTCGTTCTATTCAAGGCGGGGTCCTACA
GGCCTTGAATTTTATAGCTTCCAATTTGGTGGAGGATGGATGGTCTATAG
ACGTGTGTGGGCACTCCTTAGGGGGGGCACTGGCGTGCTTGATGGCCCAC
GAGATCGATCGGCGCATGCCTGCCTTGGTAGAGGAAGGGAGGCTGAATGT
TTTTTCCTTTGGGGCGCCAAGGGTGGGTAACACGGCGTTTTGTGAGGACT
ATGACAAGCGGCTTAAAAACCAGAGCTTTCGAATAGTGAATGGGTTGGAC
GTTGTTGCGCGAATGCCACGAGGGTCGGGTGAATCTTCCCTATTGATGGA
ATACAGTCATTGCGGGCGCACGGTACTACTGACCGAGACAGAAGACGGTC
GATTTAGTGTATGGGTGGAGGGCGAAAGTGAAGGCACTTGCCCACTCAAA
GAAGGAGAGGCATTTACGAGCACGACGCCTACGAGTCAATCCATGGCGGA
GATTATCAAGAAGGCCGCAATAGAAGCGATGGAGAGAGGGAAGGGAGGTC
TTGAGTTTGAAACTCCATTTAGCAAGGCAACCTTTGCGAACGGTACAGCT
GCCTCAGTGCAAGAAATGCTGCGGGCCGCCGGAAACTTTACAAACCTTCA
AGCTATGCTCTCCTCTACGTCCTCCATCGACTACTTCTCCTCTTTCACCT
CCATTCCTTCCTCGCCTTCTCTGGGGCCATTTGGACAGCTGAGCTTGCAA
ACGGATTTGCAGCAAATCGCCAATGCAGTGTTTGGAAGCGCGATGAACTC
GACAGCTACGATTGGCAAGAGCTTGGGGTTGAATGAGACGTTTGTAGATA
GTGAGTTGAGTTTAATTCGAGGGTTGGTGTACGGAGATGCATTAGCCCAC
CATATGGAGCCGCTTTATTATGTTGCGCTTGAGAAAGCGTTTGGGATTGC
GATGGAGGAAGGGGTGGATGACAAGAAAGGGGAAGAGAAGGGGGATGGTG
CAACGAAGAAGTACGGATAA back to top
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