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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr9 | genome | chr9:817894..820767 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO09G02760.1 vs.
Match: WP_082632271.1 (hypothetical protein [Algoriphagus resistens]) HSP 1 Score: 86.7 bits (213), Expect = 3.300e-13 Identity = 65/247 (26.32%), Postives = 120/247 (48.58%), Query Frame = 0
Query: 201 HHIFVAAPLFNSFEFVEEFLESIESQSYPHVTVVVYDDSSDDGSADLVESLIPNLSYEVIILRGSERRGPSYAKWVLMRAIRRLAAPMDIVLFIDGDDKFFHDEVLDEVAATFRKKKPWFAYGRI------RGYYEEQCGPPPPIVYHPHNQSSSVRTSAWTYCHPRVFRAFLLHHFEEND-----FRDPASERWLLKYTDRQMVYKALELSGDKKVAFMDGERPHVYYRMTGNS--TVYMDQKIKN 435
+ + V N+ ++++ L+S+ +QSY + ++ DD+S+DGSA ++P+ + +V++++ + G +Y + AI P DIVL +DGDD +EVL +V + + + W Y + RG+ E P +V H W H + FRA L + D +D + WL D +++ ++L+G KV F D + +VY ++GN+ T+ + +I+N
Sbjct: 372 NRLVVITAFRNAGDYLKRNLQSLVNQSYSNYRIIYIDDASEDGSA----HILPDDNDQVMVIQNKAKCGSAYN---IHHAITTYCKPEDIVLLVDGDDWLPDNEVLAKVNSYYNAHECWVMYSQFQYEDGTRGFCEPFASPKDLLVQRSH----------WRSSHLKTFRAGLFQYIGNVDREYLCLKDEKGD-WLQSAVDAAIMFPLIDLAGFAKVRFYD-DILYVYNDVSGNNHHTLSREDQIQN 599
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO09G02760.1 ID=NO09G02760.1|Name=NO09G02760.1|organism=Nannochloropsis oceanica|type=mRNA|length=2715bp AAGACCCAAACAAACAGACAGCCAGGCCGTGCCAGTGGAAAGATATCGTC GTACAGAGCCTCGATCACGGGATAATATCGCCACCCGGCCTAAAGGGAAT TGTCCATCCTATTTAAGTGATTGCCTCCATCGACCAGTATGCAGGTCATC CCTCTCCCCGCCCCGCTATTTTTTACTTCTACCCACCACTACTATAATGG CCATAATGGCCAACATCTCGTGGGCCGAGCCAGAAGACTCCAATTCTATG TCTGTAATGCCATCTTGGCGGTTTTCCTCCTTGTGTGCATGTACTTGCAT AATTTGAGAGACCATGCGAGCGACTCTCGTCCCTTCTACGTCACACAAGC CCTGCAGTCGGCAGGGATCCGGGGAGACAAGGGTATGAAGATCACTGAGA CCGAACAGACAACAACAAATTCGGCTACTGAGGAAAGGAATTCTGCCGTA TCTAGCTTTATCTCGACCATCAAGCAAGGGAAGATCTTAAATAGCTCAGG CTTTTCCACAACTGCCTCGACCGCTGCGGTGGCCTCAGTCGATGGCAAGA GCGACACAGCATCTACGTCTCCCTTTGACATCAAGAGAGCAACGTTGACC GACTTTTCTGTCGCCTCTACCCTTGTGACCACCACACTGCAAATGGCGGA CGACGCAGCTCTTAACGCCTTGAAGGTAACCTCGAACGTGCCTCCCTCTT ATTGTATCACTGACGAAGACATCGCCTCTGCTCCTAAGCACCATATCTTT GTGGCTGCCCCCCTCTTTAACTCGTTCGAGTTCGTGGAGGAATTCTTAGA AAGCATTGAGAGCCAAAGCTACCCCCATGTAACTGTGGTAGTTTACGATG ACTCTTCCGACGATGGCAGCGCCGACCTGGTGGAATCTCTAATCCCCAAC TTATCGTACGAAGTAATCATCTTGCGCGGGAGCGAGCGCCGCGGTCCCTC CTATGCCAAATGGGTGTTGATGCGGGCCATTCGCCGTCTCGCCGCACCTA TGGACATTGTGCTTTTTATCGATGGAGACGACAAATTTTTCCACGACGAG GTGCTGGACGAGGTGGCAGCCACTTTCCGGAAGAAAAAGCCCTGGTTTGC GTACGGTCGCATCCGAGGTTACTACGAGGAGCAATGTGGCCCTCCCCCAC CCATTGTCTACCACCCCCATAATCAGTCTTCCAGCGTGCGGACCTCTGCT TGGACCTATTGCCACCCGCGGGTGTTTCGTGCGTTTTTGTTGCACCATTT TGAGGAAAATGATTTCCGAGACCCGGCTTCGGAGAGGTGGTTACTAAAGT ACACAGACAGGCAGATGGTTTACAAGGCTTTGGAACTTTCAGGGGATAAA AAGGTGGCTTTTATGGATGGAGAACGGCCGCATGTTTATTACAGGATGAC GGGAAATTCGACGGTTTACATGGATCAGAAGATTAAAAACAAGGATTTAA ACTATGTCCAGGCGTTGATTGCCCAGACGGAAGGGTTGCCCGAACCGATC CATATCATTAGTTGTGCGTACAAGAGGGTTTCGTTGCTAAAGGATGTGTT GAAAGCGAATATTGACCTGCAAAATGTGGATAAGCGGCCTATTTATCTTC ATGTTTGTAATAATGGGGATGATGCACAAGCGGTGGAGATTGAGTCGATC CTTAAGGGCATAAAGGGCTTGGCTGGGTACCGCATGAGAACATTCCATGA CAATCCTGGTGGGTTTGCCCGTTTCTACATGATGCAAGATGCGGTTAAAG AATTTAACGTCGACTATTTCGTGATGTTGGACGACGATATCAAATTGCCT GCGCCGAATGGTTTGCTGGACTTGATGGCTGAGGCGCGGCCGCAAGAGTA TAATAGCTGGTGGGGAAGACACTTTCAAGGACCCATGGCTGACTACCAGT CTTCTAGGCTCACTCCAACTGATTTGAAAGCGGGGAAAATAAGTGGGGTA ACCAAGTTCCATTACGCTGGGACAGGGCTTTCGGTAATTGATGCTGACAT TATCCGGTTTTATTTCCCGCTGATCGACAAGGTCCCCGAGGCGTACCGAA AGGTGGAAGACCTCTGGCTCTCCTACGTGGTCCATCAAATTGGCTGGCGC GTCCGTCGCATCGTCATGTCCGGTGTCAATTTTATGGAAGACATCAAACT TAATCATGATGATATCTCCACGGAGCTGGTCAAGGCCACGGCCTTGTGGC GGAAGCTCAAGCCAACTAAACTGGAAATGCTTGAGGATTTGCGGATATGT GGGTGGAATGTTTAGGGAGGTTATGCATGCATGGGATATGGCTAAAAATT GTTTGGGTGAGGACGTGGAAAACTCCATTCGTTACCTCCATACAATGATA TCTCTAAAACTACATAATTTAGCTTTTTTATCAGCAGGTAGCACTTATTT ATGCCTCTGTGCGCATTTATTTTGCTTGTCTCACGAGCCTGATAGGTAGA GAATCAAGTCATTATATTTGTTAAGGAGGGGTCGAGATAACACCGTTGAC CTACCACAAGTGAAAGTGCATTATGTGACTCAAAGTACAGAAATGTAGCA AATGTAGAAAATGCGACCGCAATCGGCTTCTTACACTGCTGCAGTGGAGC TACAGCACATGCAGTGAGGGAGGCACGAAGTGACCACAAGGTTCCGAAGC AATCAAACTACTAATTAGAAAGACAATAAGCTCGAGATCAATGAAATTAT ATGCTATTGGCCAAT back to topprotein sequence of NO09G02760.1 >NO09G02760.1-protein ID=NO09G02760.1-protein|Name=NO09G02760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=709bp MQVIPLPAPLFFTSTHHYYNGHNGQHLVGRARRLQFYVCNAILAVFLLVC MYLHNLRDHASDSRPFYVTQALQSAGIRGDKGMKITETEQTTTNSATEER NSAVSSFISTIKQGKILNSSGFSTTASTAAVASVDGKSDTASTSPFDIKR ATLTDFSVASTLVTTTLQMADDAALNALKVTSNVPPSYCITDEDIASAPK HHIFVAAPLFNSFEFVEEFLESIESQSYPHVTVVVYDDSSDDGSADLVES LIPNLSYEVIILRGSERRGPSYAKWVLMRAIRRLAAPMDIVLFIDGDDKF FHDEVLDEVAATFRKKKPWFAYGRIRGYYEEQCGPPPPIVYHPHNQSSSV RTSAWTYCHPRVFRAFLLHHFEENDFRDPASERWLLKYTDRQMVYKALEL SGDKKVAFMDGERPHVYYRMTGNSTVYMDQKIKNKDLNYVQALIAQTEGL PEPIHIISCAYKRVSLLKDVLKANIDLQNVDKRPIYLHVCNNGDDAQAVE IESILKGIKGLAGYRMRTFHDNPGGFARFYMMQDAVKEFNVDYFVMLDDD IKLPAPNGLLDLMAEARPQEYNSWWGRHFQGPMADYQSSRLTPTDLKAGK ISGVTKFHYAGTGLSVIDADIIRFYFPLIDKVPEAYRKVEDLWLSYVVHQ IGWRVRRIVMSGVNFMEDIKLNHDDISTELVKATALWRKLKPTKLEMLED LRICGWNV* back to topmRNA from alignment at chr9:817894..820767- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO09G02760.1 ID=NO09G02760.1|Name=NO09G02760.1|organism=Nannochloropsis oceanica|type=mRNA|length=2874bp|location=Sequence derived from alignment at chr9:817894..820767- (Nannochloropsis oceanica) AAGACCCAAACAAACAGACAGCCAGGCCGTGCCAGTGGAAAGATATCGTC
GTACAGAGCCTCGATCACGGGATAATATCGCCACCCGGCCTAAAGGGAAT
TGTCCATCCTATTTAAGTGATTGCCTCCATCGACCAGTATGCAGGTCATC
CCTCTCCCCGCCCCGCTATTTTTTACTTCTACCCACCACTACTATAATGG
CCATAATGGCCAACATCTCGTGGGCCGAGCCAGAAGACTCCAATTCTATG
TCTGTAATGCCATCTTGGCGGTTTTCCTCCTTGTGTGCATGTACTTGCAT
AATTTGAGAGACCATGCGAGCGACTCTCGTCCCTTCTACGTCACACAAGC
CCTGCAGTCGGCAGGGATCCGGGGAGACAAGGGTATGAAGATCACTGAGA
CCGAACAGACAACAACAAATTCGGCTACTGAGGAAAGGAATTCTGCCGTA
TCTAGCTTTATCTCGACCATCAAGCAAGGGAAGATCTTAAATAGCTCAGG
CTTTTCCACAACTGCCTCGACCGCTGCGGTGGCCTCAGTCGATGGCAAGA
GCGACACAGCATCTACGTCTCCCTTTGACATCAAGAGAGCAACGTTGACC
GACTTTTCTGTCGCCTCTACCCTTGTGACCACCACACTGCAAATGGCGGA
CGACGCAGCTCTTAACGCCTTGAAGGTAACCTCGAACGTGCCTCCCTCTT
ATTGTATCACTGACGAAGACATCGCCTCTGCTCCTAAGCACCATATCTTT
GTGGCTGCCCCCCTCTTTAACTCGTTCGAGTTCGTGGAGGAATTCTTAGA
AAGCATTGAGAGCCAAAGCTACCCCCATGTAACTGTGGTAGTTTACGATG
ACTCTTCCGACGATGGCAGCGCCGACCTGGTGGAATCTCTAATCCCCAAC
TTATCGTACGAAGTAATCATCTTGCGCGGGAGCGAGCGCCGCGGTCCCTC
CTATGCCAAATGGGTGTTGATGCGGGCCATTCGCCGTCTCGCCGCACCTA
TGGACATTGTGCTTTTTATCGATGGAGACGACAAATTTTTCCACGACGAG
GTGCTGGACGAGGTGGCAGCCACTTTCCGGAAGAAAAAGCCCTGGTTTGC
GTACGGTCGCATCCGAGGTTACTACGAGGAGCAATGTGGCCCTCCCCCAC
CCATTGTCTACCACCCCCATAATCAGTCTTCCAGCGTGCGGACCTCTGCT
TGGACCTATTGCCACCCGCGGGTGTTTCGTGCGTTTTTGTTGCACCATTT
TGAGGAAAATGATTTCCGAGACCCGGCTTCGGAGAGGTGGTTACTAAAGT
ACACAGACAGGCAGATGGTTTACAAGGCTTTGGAACTTTCAGGGGATAAA
AAGGTGGCTTTTATGGATGGAGAACGGCCGCATGTTTATTACAGGATGAC
GGGAAATTCGACGGTTTACATGGATCAGAAGATTAAAAACAAGGATTTAA
ACTATGTCCAGGCGTTGATTGCCCAGACGGAAGGGTTGCCCGAACCGATC
CATATCATTAGTTGTGCGTACAAGAGGGTTTCGTTGCTAAAGGATGTGTT
GAAAGCGAATATTGACCTGCAAAATGTGGATAAGCGGCCTATTTATCTTC
ATGTTTGTAATAATGGGGATGATGCACAAGCGGTGGAGATTGAGTCGATC
CTTAAGGGCATAAAGGGCTTGGCTGGGTACCGCATGAGAACATTCCATGA
CAATCCTGGTGGGTTTGCCCGTTTCTACATGATGCAAGATGCGGTTAAAG
AATTTAACGTCGACTATTTCGTGATGTTGGACGACGATATCAAATTGCCT
GCGCCGAATGGTTTGCTGGACTTGATGGCTGAGGCGCGGCCGCAAGAGTA
TAATAGCTGGTGGGGAAGACACTTTCAAGGACCCATGGCTGACTACCAGT
CTTCTAGGCTCACTCCAACTGATTTGAAAGCGGGGAAAATAAGTGGGGTA
ACCAAGTTCCATTACGCTGGGACAGGGCTTTCGGTAATTGATGCTGACAT
TATCCGGTTTTATTTCCCGCTGATCGACAAGGTAGGGGAAAAGAAGATGA
AGAAGAGAAGGAGGGTGAAGGGGCTGCCGCTAATCTTATTTAATCGGCTG
ATATTCTCTGTGTCTTTCAATTCCTCCATATATCGCTCGCTCATCCCCTC
CCAACCAACTACCCTCTGGTATCCCGCCAACATACATAAGGTCCCCGAGG
CGTACCGAAAGGTGGAAGACCTCTGGCTCTCCTACGTGGTCCATCAAATT
GGCTGGCGCGTCCGTCGCATCGTCATGTCCGGTGTCAATTTTATGGAAGA
CATCAAACTTAATCATGATGATATCTCCACGGAGCTGGTCAAGGCCACGG
CCTTGTGGCGGAAGCTCAAGCCAACTAAACTGGAAATGCTTGAGGATTTG
CGGATATGTGGGTGGAATGTTTAGGGAGGTTATGCATGCATGGGATATGG
CTAAAAATTGTTTGGGTGAGGACGTGGAAAACTCCATTCGTTACCTCCAT
ACAATGATATCTCTAAAACTACATAATTTAGCTTTTTTATCAGCAGGTAG
CACTTATTTATGCCTCTGTGCGCATTTATTTTGCTTGTCTCACGAGCCTG
ATAGGTAGAGAATCAAGTCATTATATTTGTTAAGGAGGGGTCGAGATAAC
ACCGTTGACCTACCACAAGTGAAAGTGCATTATGTGACTCAAAGTACAGA
AATGTAGCAAATGTAGAAAATGCGACCGCAATCGGCTTCTTACACTGCTG
CAGTGGAGCTACAGCACATGCAGTGAGGGAGGCACGAAGTGACCACAAGG
TTCCGAAGCAATCAAACTACTAATTAGAAAGACAATAAGCTCGAGATCAA
TGAAATTATATGCTATTGGCCAAT back to topCoding sequence (CDS) from alignment at chr9:817894..820767- >NO09G02760.1 ID=NO09G02760.1|Name=NO09G02760.1|organism=Nannochloropsis oceanica|type=CDS|length=2127bp|location=Sequence derived from alignment at chr9:817894..820767- (Nannochloropsis oceanica) ATGCAGGTCATCCCTCTCCCCGCCCCGCTATTTTTTACTTCTACCCACCA CTACTATAATGGCCATAATGGCCAACATCTCGTGGGCCGAGCCAGAAGAC TCCAATTCTATGTCTGTAATGCCATCTTGGCGGTTTTCCTCCTTGTGTGC ATGTACTTGCATAATTTGAGAGACCATGCGAGCGACTCTCGTCCCTTCTA CGTCACACAAGCCCTGCAGTCGGCAGGGATCCGGGGAGACAAGGGTATGA AGATCACTGAGACCGAACAGACAACAACAAATTCGGCTACTGAGGAAAGG AATTCTGCCGTATCTAGCTTTATCTCGACCATCAAGCAAGGGAAGATCTT AAATAGCTCAGGCTTTTCCACAACTGCCTCGACCGCTGCGGTGGCCTCAG TCGATGGCAAGAGCGACACAGCATCTACGTCTCCCTTTGACATCAAGAGA GCAACGTTGACCGACTTTTCTGTCGCCTCTACCCTTGTGACCACCACACT GCAAATGGCGGACGACGCAGCTCTTAACGCCTTGAAGGTAACCTCGAACG TGCCTCCCTCTTATTGTATCACTGACGAAGACATCGCCTCTGCTCCTAAG CACCATATCTTTGTGGCTGCCCCCCTCTTTAACTCGTTCGAGTTCGTGGA GGAATTCTTAGAAAGCATTGAGAGCCAAAGCTACCCCCATGTAACTGTGG TAGTTTACGATGACTCTTCCGACGATGGCAGCGCCGACCTGGTGGAATCT CTAATCCCCAACTTATCGTACGAAGTAATCATCTTGCGCGGGAGCGAGCG CCGCGGTCCCTCCTATGCCAAATGGGTGTTGATGCGGGCCATTCGCCGTC TCGCCGCACCTATGGACATTGTGCTTTTTATCGATGGAGACGACAAATTT TTCCACGACGAGGTGCTGGACGAGGTGGCAGCCACTTTCCGGAAGAAAAA GCCCTGGTTTGCGTACGGTCGCATCCGAGGTTACTACGAGGAGCAATGTG GCCCTCCCCCACCCATTGTCTACCACCCCCATAATCAGTCTTCCAGCGTG CGGACCTCTGCTTGGACCTATTGCCACCCGCGGGTGTTTCGTGCGTTTTT GTTGCACCATTTTGAGGAAAATGATTTCCGAGACCCGGCTTCGGAGAGGT GGTTACTAAAGTACACAGACAGGCAGATGGTTTACAAGGCTTTGGAACTT TCAGGGGATAAAAAGGTGGCTTTTATGGATGGAGAACGGCCGCATGTTTA TTACAGGATGACGGGAAATTCGACGGTTTACATGGATCAGAAGATTAAAA ACAAGGATTTAAACTATGTCCAGGCGTTGATTGCCCAGACGGAAGGGTTG CCCGAACCGATCCATATCATTAGTTGTGCGTACAAGAGGGTTTCGTTGCT AAAGGATGTGTTGAAAGCGAATATTGACCTGCAAAATGTGGATAAGCGGC CTATTTATCTTCATGTTTGTAATAATGGGGATGATGCACAAGCGGTGGAG ATTGAGTCGATCCTTAAGGGCATAAAGGGCTTGGCTGGGTACCGCATGAG AACATTCCATGACAATCCTGGTGGGTTTGCCCGTTTCTACATGATGCAAG ATGCGGTTAAAGAATTTAACGTCGACTATTTCGTGATGTTGGACGACGAT ATCAAATTGCCTGCGCCGAATGGTTTGCTGGACTTGATGGCTGAGGCGCG GCCGCAAGAGTATAATAGCTGGTGGGGAAGACACTTTCAAGGACCCATGG CTGACTACCAGTCTTCTAGGCTCACTCCAACTGATTTGAAAGCGGGGAAA ATAAGTGGGGTAACCAAGTTCCATTACGCTGGGACAGGGCTTTCGGTAAT TGATGCTGACATTATCCGGTTTTATTTCCCGCTGATCGACAAGGTCCCCG AGGCGTACCGAAAGGTGGAAGACCTCTGGCTCTCCTACGTGGTCCATCAA ATTGGCTGGCGCGTCCGTCGCATCGTCATGTCCGGTGTCAATTTTATGGA AGACATCAAACTTAATCATGATGATATCTCCACGGAGCTGGTCAAGGCCA CGGCCTTGTGGCGGAAGCTCAAGCCAACTAAACTGGAAATGCTTGAGGAT TTGCGGATATGTGGGTGGAATGTTTAG back to top
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