NO09G01560.1, NO09G01560.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G01560.1
Unique Name	NO09G01560.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3520
Alignment location	chr9:492687..496575 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:492687..496575 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO09G01560.1 vs.
Match: EWM27641.1 (dna topoisomerase i [Nannochloropsis gaditana])

HSP 1 Score: 1176.8 bits (3043), Expect = 0.000e+0
Identity = 605/734 (82.43%), Postives = 656/734 (89.37%), Query Frame = 0

Query:  189 DEEDEEDSDDDGNKGRRKKAAPKKKAAATKKKPTTAAAAKKKKVATTKKSSSSSSTKKKAAVKQEPGSVAPPKAALSSKAVRIEQAMKAFKWWDEEALPEGIQWKGLEHNGIFFPPEYVPHGVKMLYEGQEVELPPDLEEVATFFASMPEDGPQLGAPETRKIFVKNFFQQFKEMLKDRLDDDLGVKDFEKCDFTRIRQHLETQKMIKKAATVEEKALQKAEKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKQRCLPENIIVNMGPGARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLSASSSFKGKSDMEKYDKAARLKECIEKIRRDYESNLGKKAERSAKQIATAMFIIDKLALRVGGEKGEDEADTVGCCSLRVEHMKFPPAEEGGGE-GGAGKYEIELEFLGKDSMLFKQTIDFASYGEHGKQVFRNLRHFVKEKKPEQDVFETLTPAVLNAHLSSLMPGLSAKVFRTYNASETLQNELPTPEDLAGMSVADKVVAYNEANRKVAILCNHQRTVTKGMEAALGNLQERLALLMEQTKELKQQKEMIKSGKTGKIRTRKDDVMTDKVAKALEKAEALRKKAVTPEEKVKASQALDEAKELKRAAQAWKAKDAHLFARVPTKEQVDRKIEQWREKVTKLEVDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERVFAKTLRDKFVWAMGVPPGWRFEGSKK 922
            + E+EE+S++DG   ++K +A KK   A  KK TT AA K K+    K       +KK    K+  G +  PK ALSSKAVRIEQAMKAFKWWD+E LP+GIQW+ LEHNGIFFPP+YVPHGVKMLY+G+EVELP DLEEVATFFASMP DGPQLG P+TRKIFVKNFF QFKEMLKD+L+DDLG+KDF+KCDF+ IR HLETQKMIKKAATVEEKAL KA KEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIK+RCLPENIIVN+GP ARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVML+ASSSFKGKSDMEKYDKAARLK+CI +IRRDYE NLGKKA+R AKQIATAM+IIDKLALRVGGEKGEDEADTVGCCSLR+EH++FPP  E GGE  GA +YEIELEFLGKDSMLFKQTIDFASYGE+GKQVF+NLRHFVK+KKPEQDVFE LTP+VLNAHL SLMPGLSAKVFRTYNASETLQNELPT EDLAGMSV DKVVAYN+ANRKVAILCNHQRTVTK ME ALGNLQERL LL +Q KEL  QKE++KSGKT KIRTRKDDV+TDK  KA++KAE LRKKA TPEEK+KAS ALDEAKELKR AQA KAKDAHLFAR PTKEQVDRKIEQWREK+TKLE+DIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIER+FAKTLRDKFVWAMGVPP WRFEG+ K
Sbjct:    3 ESEEEEESEEDGRVTKKKVSAKKKTKGAVPKKTTTKAAPKTKRKPALK-------SKKPTVKKEAKGEL--PKTALSSKAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELPTVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRFEGTSK 727

The following BLAST results are available for this feature:

BLAST of NO09G01560.1 vs.

BLAST of NO09G01560.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27641.1	0.000e+0	82.43	dna topoisomerase i [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO09G01560	NO09G01560	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO09G01560.1	NO09G01560.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO09G01560.1.cds1	NO09G01560.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G01560.1.cds2	NO09G01560.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G01560.1.cds3	NO09G01560.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr9:492687..496575-
coding sequence from alignment at chr9:492687..496575-

mRNA sequence

>NO09G01560.1 ID=NO09G01560.1|Name=NO09G01560.1|organism=Nannochloropsis oceanica|type=mRNA|length=3520bp
GGCGAAGAAGCTGGGAGGAGACGCCTATGGACTGCGTATTTGCCCTTGCC
AGCCACTTCCATCGCATGTCCACAGCACTAAATGTCCTTTCTGCAGAGTG
AATTCAATGATACCTGCATTTCATGGTCGAACGGCGATAGGACGTGGCGT
CTTTGCAGGCAAACTGAAGTGCTTTCGTTTGCGAGTCTTCGGTTGTTGAG
CCATCAAGTTTCACTCATGGACGTCTCCCTCCTTCCCTACACACACACCT
GCGAACGACAATATACCCGATAGCATGTCGGACTTGGAGGACGAGATGCC
CCTCGCAGCGTTGTCGGCGCTGAAGAAGGGCTCCCCGCTAAGCAAGAGCA
CCCCTACCGGCTCCCCACGGGCAGCAGCAGCAGCAGCAGCAAGCAAAAAG
GCGACGTCAGCAGTAGAAACGGCTGCAGCAAAGATGCAGGACAGCAGTGA
CGACGAAGACGACAAGCCAATCTCCACTCTAGCCACCAACAAGCGGAAGC
GCGAATCACCAGCCAGCTCGCCTAAGGCAGCAGCAGCAACAGCTGCGAAG
AGAGGTGGAGGGAAAGGGGAGGCGTCTGCGACGTCTTCTGCTAAGAAAAA
GGTGGCTACCTCGAAGGGAAAAGCCAAGGGCAAGTCTCCAGCGGGTGCGC
CCAAGGGAATAGGGGGAAAGCGAGGGAAGGTAACTGTGCCTGTTACGAAG
AAGCGGAGGAAGGCAGAGAGCAGTGAGGACGAGAACGAGGACGAGGATGA
CGACGAGATTGGTGATGGTGATTTGGAAGATAGTAGCGCGGATGAAAAGG
AGGAGGACGAGGAAGGGATGGAGGACAGCGATGAGGAGGATGAGGAGGAT
GAGGAGGACAGCGACGACGATGGGAATAAGGGCAGGAGGAAGAAGGCGGC
GCCTAAGAAAAAGGCAGCTGCGACCAAGAAGAAACCGACCACCGCTGCTG
CTGCCAAGAAAAAGAAGGTAGCGACTACGAAGAAGAGCAGCAGCAGCAGC
AGCACTAAAAAGAAAGCTGCCGTGAAGCAGGAGCCAGGTTCAGTAGCCCC
TCCCAAGGCCGCTCTTTCCTCCAAGGCCGTCCGAATCGAGCAAGCGATGA
AGGCGTTCAAATGGTGGGACGAAGAAGCCTTGCCTGAAGGTATCCAATGG
AAAGGCCTTGAGCATAACGGGATCTTCTTCCCCCCCGAGTACGTCCCCCA
CGGTGTAAAGATGCTCTATGAGGGCCAAGAGGTGGAGTTACCGCCCGATC
TGGAGGAGGTTGCAACCTTCTTTGCATCCATGCCAGAGGATGGGCCTCAA
CTAGGTGCACCGGAGACGAGGAAAATATTTGTCAAGAATTTTTTCCAGCA
GTTCAAGGAGATGCTCAAGGATCGTTTGGACGACGATTTAGGGGTGAAGG
ACTTCGAGAAGTGTGATTTCACGCGGATCCGGCAGCATTTGGAGACGCAG
AAGATGATCAAGAAAGCCGCCACGGTAGAGGAGAAGGCGTTGCAGAAGGC
CGAAAAGGAGGAGCGTCAGGACCATTACGGCTATGCCATTGTGGACGGCC
GCATTGAGAAGGTGGGAAATTTCAACATGGAGCCCCCGGGGTTGTTTCGG
GGCCGTGGTATGCACCCCCTGATGGGGATGATCAAGCAACGGTGCTTGCC
TGAGAATATCATCGTGAATATGGGCCCGGGGGCGCGGGTGCCACCGTGTC
CCCTCCCGGGACATGCGTGGGACCGAGTGCAGCACGACAACAAGGTAACG
TGGCTAGCGAGCTGGAAGGAAAACGTTCTGAACGGCGTCAAGTACGTCAT
GCTCTCGGCGTCGTCCTCGTTCAAAGGCAAGTCGGACATGGAGAAATATG
ACAAAGCGGCACGGTTGAAAGAGTGCATAGAGAAGATCCGTCGGGATTAC
GAATCCAATCTAGGGAAAAAAGCCGAGCGGTCCGCGAAGCAGATTGCGAC
CGCCATGTTCATCATCGACAAGCTGGCTCTGAGGGTGGGGGGGGAGAAGG
GAGAGGACGAGGCGGATACGGTAGGGTGTTGTTCGCTCCGGGTGGAGCAC
ATGAAATTTCCTCCGGCAGAGGAAGGAGGGGGGGAGGGAGGGGCAGGGAA
GTATGAGATCGAGTTGGAGTTCTTGGGGAAAGATTCGATGTTGTTCAAGC
AGACAATTGATTTCGCGAGTTACGGGGAGCATGGGAAGCAAGTCTTTCGG
AACCTGCGGCATTTCGTGAAGGAGAAGAAGCCAGAGCAGGACGTGTTTGA
AACGCTAACCCCGGCGGTATTAAACGCCCACTTAAGCAGCCTTATGCCGG
GCTTGTCGGCCAAGGTGTTTAGGACGTACAACGCGTCGGAAACCCTCCAG
AATGAGTTGCCGACCCCAGAAGACTTGGCCGGGATGAGCGTCGCGGACAA
GGTGGTGGCTTACAACGAGGCGAACCGGAAGGTGGCCATCCTGTGCAACC
ACCAACGGACGGTGACCAAGGGGATGGAGGCGGCCCTGGGGAACCTGCAG
GAGAGGCTGGCGTTGCTGATGGAGCAGACGAAGGAGTTGAAGCAACAGAA
GGAGATGATCAAGAGCGGCAAGACGGGTAAAATTCGAACGCGGAAAGACG
ACGTCATGACGGATAAGGTGGCCAAGGCCCTGGAGAAAGCGGAGGCGTTG
AGAAAAAAGGCCGTTACGCCCGAAGAGAAGGTCAAGGCCTCTCAAGCATT
GGACGAGGCCAAGGAATTGAAACGCGCGGCTCAGGCGTGGAAAGCGAAGG
ATGCGCATTTGTTTGCCAGGGTGCCTACCAAGGAGCAGGTGGACAGGAAG
ATAGAGCAGTGGCGAGAAAAAGTCACTAAGCTCGAGGTCGATATCCGCAA
CAAGGACGAGAACAAGGAGGTGGCCCTGGGGACGAGTAAAATTAATTACA
TGGATCCGAGGATTTCAGTAGCGTGGTGTAAGCGGGTGGAGGTGCCAATC
GAGCGTGTGTTTGCCAAGACATTGCGGGATAAGTTTGTATGGGCCATGGG
GGTGCCCCCGGGCTGGAGATTCGAGGGGTCGAAGAAATAGGGGAGAGAAG
GGGAAGGAAGGGGAAAAGGTTGGTTGGGTGTCTTCAATGGGAGTTGAAGT
CTGAGAGAGACATGTGCGCGGAGGTCGATTGAAATGGCGAGTGAAGAGAA
ACGCAGACAGAAAGAGGGTCAGAGAGAGGTAGCTAGAGGGAGAAAACTGA
TGATGTTTTAGGCATCTACGTGGGAAGTGGTCTCAGGAGTGATTTTTCCG
ACGACCACATGCGGCGCAAACAGGAAAAGTGAGGGAGTAGGTTGCGGAAG
GAAGAGGAAGAGGAGGAGGAAGGAGAAGAGAGGAGGTGGAGGAGGCGGAA
GATGAGGAAAGGCTGCGCCCAAAACAAGTAGGACAGAACAAAAACAATAC
AGGACAGCGAAAGAATAAGAATATATGACAGGAAGGTAAAAAAGGAAAGA
AAACAAGCCGACTACGGTTGTCCAAATCCCGACGCGCTTCCACTTACCGA
AAGGAAAAAGCAACGCAGAG

protein sequence of NO09G01560.1

>NO09G01560.1-protein ID=NO09G01560.1-protein|Name=NO09G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=922bp
MSDLEDEMPLAALSALKKGSPLSKSTPTGSPRAAAAAAASKKATSAVETA
AAKMQDSSDDEDDKPISTLATNKRKRESPASSPKAAAATAAKRGGGKGEA
SATSSAKKKVATSKGKAKGKSPAGAPKGIGGKRGKVTVPVTKKRRKAESS
EDENEDEDDDEIGDGDLEDSSADEKEEDEEGMEDSDEEDEEDEEDSDDDG
NKGRRKKAAPKKKAAATKKKPTTAAAAKKKKVATTKKSSSSSSTKKKAAV
KQEPGSVAPPKAALSSKAVRIEQAMKAFKWWDEEALPEGIQWKGLEHNGI
FFPPEYVPHGVKMLYEGQEVELPPDLEEVATFFASMPEDGPQLGAPETRK
IFVKNFFQQFKEMLKDRLDDDLGVKDFEKCDFTRIRQHLETQKMIKKAAT
VEEKALQKAEKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLM
GMIKQRCLPENIIVNMGPGARVPPCPLPGHAWDRVQHDNKVTWLASWKEN
VLNGVKYVMLSASSSFKGKSDMEKYDKAARLKECIEKIRRDYESNLGKKA
ERSAKQIATAMFIIDKLALRVGGEKGEDEADTVGCCSLRVEHMKFPPAEE
GGGEGGAGKYEIELEFLGKDSMLFKQTIDFASYGEHGKQVFRNLRHFVKE
KKPEQDVFETLTPAVLNAHLSSLMPGLSAKVFRTYNASETLQNELPTPED
LAGMSVADKVVAYNEANRKVAILCNHQRTVTKGMEAALGNLQERLALLME
QTKELKQQKEMIKSGKTGKIRTRKDDVMTDKVAKALEKAEALRKKAVTPE
EKVKASQALDEAKELKRAAQAWKAKDAHLFARVPTKEQVDRKIEQWREKV
TKLEVDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERVFAKTL
RDKFVWAMGVPPGWRFEGSKK*

mRNA from alignment at chr9:492687..496575-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO09G01560.1 ID=NO09G01560.1|Name=NO09G01560.1|organism=Nannochloropsis oceanica|type=mRNA|length=3889bp|location=Sequence derived from alignment at chr9:492687..496575- (Nannochloropsis oceanica)
GGCGAAGAAGCTGGGAGGAGACGCCTATGGACTGCGTATTTGCCCTTGCC
AGCCACTTCCATCGCATGTCCACAGCACTAAATGTCCTTTCTGCAGAGTG
AATTCAATGATACCTGCATTTCATGGTCGAACGGCGATAGGACGTGGCGT
CTTTGCAGGCAAACTGAAGTGCTTTCGTTTGCGAGTCTTCGGTTGTTGAG
CCATCAAGTTTCACTCATGGACGTCTCCCTCCTTCCCTACACACACACCT
GCGAACGACAATATACCCGATAGCATGTCGGACTTGGAGGACGAGATGCC
CCTCGCAGCGTTGTCGGCGCTGAAGAAGGGCTCCCCGCTAAGCAAGAGGT
ACGTATTTCACGAGGATGATGAGAGGTGGGGAGGGTGGAGAAGGGACCAG
AAAGCTGGCACACAAGCACGCACTCACAACATACTTAATCTCGAATAAAT
CAAAGGAAATCCTGTAGAGCACACTATATTGCTTGGCATAGGCTTTCGTC
GCAAACTACAAGCAAACATCCCGCATCCCCTCTCATCCACCTCTTCACTT
CACCCACTTATACCACAGCACCCCTACCGGCTCCCCACGGGCAGCAGCAG
CAGCAGCAGCAAGCAAAAAGGCGACGTCAGCAGTAGAAACGGCTGCAGCA
AAGATGCAGGACAGCAGTGACGACGAAGACGACAAGCCAATCTCCACTCT
AGCCACCAACAAGCGGAAGCGCGAATCACCAGCCAGCTCGCCTAAGGCAG
CAGCAGCAACAGCTGCGAAGAGAGGTGGAGGGAAAGGGGAGGCGTCTGCG
ACGTCTTCTGCTAAGAAAAAGGTGGCTACCTCGAAGGGAAAAGCCAAGGG
CAAGTCTCCAGCGGGTGCGCCCAAGGGAATAGGGGGAAAGCGAGGGAAGG
TAACTGTGCCTGTTACGAAGAAGCGGAGGAAGGCAGAGAGCAGTGAGGAC
GAGAACGAGGACGAGGATGACGACGAGATTGGTGATGGTGATTTGGAAGA
TAGTAGCGCGGATGAAAAGGAGGAGGACGAGGAAGGGATGGAGGACAGCG
ATGAGGAGGATGAGGAGGATGAGGAGGACAGCGACGACGATGGGAATAAG
GGCAGGAGGAAGAAGGCGGCGCCTAAGAAAAAGGCAGCTGCGACCAAGAA
GAAACCGACCACCGCTGCTGCTGCCAAGAAAAAGAAGGTAGCGACTACGA
AGAAGAGCAGCAGCAGCAGCAGCACTAAAAAGAAAGCTGCCGTGAAGCAG
GAGCCAGGTTCAGTAGCCCCTCCCAAGGCCGCTCTTTCCTCCAAGGCCGT
CCGAATCGAGCAAGCGATGAAGGCGTTCAAATGGTGGGACGAAGAAGCCT
TGCCTGAAGGTATCCAATGGAAAGGCCTTGAGCATAACGGGATCTTCTTC
CCCCCCGAGTACGTCCCCCACGGTGTAAAGATGCTCTATGAGGGCCAAGA
GGTGGAGTTACCGCCCGATCTGGAGGAGGTTGCAACCTTCTTTGCATCCA
TGCCAGAGGATGGGCCTCAACTAGGTGCACCGGAGACGAGGAAAATATTT
GTCAAGAATTTTTTCCAGCAGTTCAAGGAGATGCTCAAGGTACGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGTCTGGTGCCAGTCCGTTAGCGTG
TTATTGTACGTTCGCCAGACCACAAACGCACGTCAACTCACCTTTCCTTC
CCTCTCTTTCCCTCCCTCCTATCTGCCTGCCTTTAAAGGATCGTTTGGAC
GACGATTTAGGGGTGAAGGACTTCGAGAAGTGTGATTTCACGCGGATCCG
GCAGCATTTGGAGACGCAGAAGATGATCAAGAAAGCCGCCACGGTAGAGG
AGAAGGCGTTGCAGAAGGCCGAAAAGGAGGAGCGTCAGGACCATTACGGC
TATGCCATTGTGGACGGCCGCATTGAGAAGGTGGGAAATTTCAACATGGA
GCCCCCGGGGTTGTTTCGGGGCCGTGGTATGCACCCCCTGATGGGGATGA
TCAAGCAACGGTGCTTGCCTGAGAATATCATCGTGAATATGGGCCCGGGG
GCGCGGGTGCCACCGTGTCCCCTCCCGGGACATGCGTGGGACCGAGTGCA
GCACGACAACAAGGTAACGTGGCTAGCGAGCTGGAAGGAAAACGTTCTGA
ACGGCGTCAAGTACGTCATGCTCTCGGCGTCGTCCTCGTTCAAAGGCAAG
TCGGACATGGAGAAATATGACAAAGCGGCACGGTTGAAAGAGTGCATAGA
GAAGATCCGTCGGGATTACGAATCCAATCTAGGGAAAAAAGCCGAGCGGT
CCGCGAAGCAGATTGCGACCGCCATGTTCATCATCGACAAGCTGGCTCTG
AGGGTGGGGGGGGAGAAGGGAGAGGACGAGGCGGATACGGTAGGGTGTTG
TTCGCTCCGGGTGGAGCACATGAAATTTCCTCCGGCAGAGGAAGGAGGGG
GGGAGGGAGGGGCAGGGAAGTATGAGATCGAGTTGGAGTTCTTGGGGAAA
GATTCGATGTTGTTCAAGCAGACAATTGATTTCGCGAGTTACGGGGAGCA
TGGGAAGCAAGTCTTTCGGAACCTGCGGCATTTCGTGAAGGAGAAGAAGC
CAGAGCAGGACGTGTTTGAAACGCTAACCCCGGCGGTATTAAACGCCCAC
TTAAGCAGCCTTATGCCGGGCTTGTCGGCCAAGGTGTTTAGGACGTACAA
CGCGTCGGAAACCCTCCAGAATGAGTTGCCGACCCCAGAAGACTTGGCCG
GGATGAGCGTCGCGGACAAGGTGGTGGCTTACAACGAGGCGAACCGGAAG
GTGGCCATCCTGTGCAACCACCAACGGACGGTGACCAAGGGGATGGAGGC
GGCCCTGGGGAACCTGCAGGAGAGGCTGGCGTTGCTGATGGAGCAGACGA
AGGAGTTGAAGCAACAGAAGGAGATGATCAAGAGCGGCAAGACGGGTAAA
ATTCGAACGCGGAAAGACGACGTCATGACGGATAAGGTGGCCAAGGCCCT
GGAGAAAGCGGAGGCGTTGAGAAAAAAGGCCGTTACGCCCGAAGAGAAGG
TCAAGGCCTCTCAAGCATTGGACGAGGCCAAGGAATTGAAACGCGCGGCT
CAGGCGTGGAAAGCGAAGGATGCGCATTTGTTTGCCAGGGTGCCTACCAA
GGAGCAGGTGGACAGGAAGATAGAGCAGTGGCGAGAAAAAGTCACTAAGC
TCGAGGTCGATATCCGCAACAAGGACGAGAACAAGGAGGTGGCCCTGGGG
ACGAGTAAAATTAATTACATGGATCCGAGGATTTCAGTAGCGTGGTGTAA
GCGGGTGGAGGTGCCAATCGAGCGTGTGTTTGCCAAGACATTGCGGGATA
AGTTTGTATGGGCCATGGGGGTGCCCCCGGGCTGGAGATTCGAGGGGTCG
AAGAAATAGGGGAGAGAAGGGGAAGGAAGGGGAAAAGGTTGGTTGGGTGT
CTTCAATGGGAGTTGAAGTCTGAGAGAGACATGTGCGCGGAGGTCGATTG
AAATGGCGAGTGAAGAGAAACGCAGACAGAAAGAGGGTCAGAGAGAGGTA
GCTAGAGGGAGAAAACTGATGATGTTTTAGGCATCTACGTGGGAAGTGGT
CTCAGGAGTGATTTTTCCGACGACCACATGCGGCGCAAACAGGAAAAGTG
AGGGAGTAGGTTGCGGAAGGAAGAGGAAGAGGAGGAGGAAGGAGAAGAGA
GGAGGTGGAGGAGGCGGAAGATGAGGAAAGGCTGCGCCCAAAACAAGTAG
GACAGAACAAAAACAATACAGGACAGCGAAAGAATAAGAATATATGACAG
GAAGGTAAAAAAGGAAAGAAAACAAGCCGACTACGGTTGTCCAAATCCCG
ACGCGCTTCCACTTACCGAAAGGAAAAAGCAACGCAGAG

Coding sequence (CDS) from alignment at chr9:492687..496575-

>NO09G01560.1 ID=NO09G01560.1|Name=NO09G01560.1|organism=Nannochloropsis oceanica|type=CDS|length=2766bp|location=Sequence derived from alignment at chr9:492687..496575- (Nannochloropsis oceanica)
ATGTCGGACTTGGAGGACGAGATGCCCCTCGCAGCGTTGTCGGCGCTGAA
GAAGGGCTCCCCGCTAAGCAAGAGCACCCCTACCGGCTCCCCACGGGCAG
CAGCAGCAGCAGCAGCAAGCAAAAAGGCGACGTCAGCAGTAGAAACGGCT
GCAGCAAAGATGCAGGACAGCAGTGACGACGAAGACGACAAGCCAATCTC
CACTCTAGCCACCAACAAGCGGAAGCGCGAATCACCAGCCAGCTCGCCTA
AGGCAGCAGCAGCAACAGCTGCGAAGAGAGGTGGAGGGAAAGGGGAGGCG
TCTGCGACGTCTTCTGCTAAGAAAAAGGTGGCTACCTCGAAGGGAAAAGC
CAAGGGCAAGTCTCCAGCGGGTGCGCCCAAGGGAATAGGGGGAAAGCGAG
GGAAGGTAACTGTGCCTGTTACGAAGAAGCGGAGGAAGGCAGAGAGCAGT
GAGGACGAGAACGAGGACGAGGATGACGACGAGATTGGTGATGGTGATTT
GGAAGATAGTAGCGCGGATGAAAAGGAGGAGGACGAGGAAGGGATGGAGG
ACAGCGATGAGGAGGATGAGGAGGATGAGGAGGACAGCGACGACGATGGG
AATAAGGGCAGGAGGAAGAAGGCGGCGCCTAAGAAAAAGGCAGCTGCGAC
CAAGAAGAAACCGACCACCGCTGCTGCTGCCAAGAAAAAGAAGGTAGCGA
CTACGAAGAAGAGCAGCAGCAGCAGCAGCACTAAAAAGAAAGCTGCCGTG
AAGCAGGAGCCAGGTTCAGTAGCCCCTCCCAAGGCCGCTCTTTCCTCCAA
GGCCGTCCGAATCGAGCAAGCGATGAAGGCGTTCAAATGGTGGGACGAAG
AAGCCTTGCCTGAAGGTATCCAATGGAAAGGCCTTGAGCATAACGGGATC
TTCTTCCCCCCCGAGTACGTCCCCCACGGTGTAAAGATGCTCTATGAGGG
CCAAGAGGTGGAGTTACCGCCCGATCTGGAGGAGGTTGCAACCTTCTTTG
CATCCATGCCAGAGGATGGGCCTCAACTAGGTGCACCGGAGACGAGGAAA
ATATTTGTCAAGAATTTTTTCCAGCAGTTCAAGGAGATGCTCAAGGATCG
TTTGGACGACGATTTAGGGGTGAAGGACTTCGAGAAGTGTGATTTCACGC
GGATCCGGCAGCATTTGGAGACGCAGAAGATGATCAAGAAAGCCGCCACG
GTAGAGGAGAAGGCGTTGCAGAAGGCCGAAAAGGAGGAGCGTCAGGACCA
TTACGGCTATGCCATTGTGGACGGCCGCATTGAGAAGGTGGGAAATTTCA
ACATGGAGCCCCCGGGGTTGTTTCGGGGCCGTGGTATGCACCCCCTGATG
GGGATGATCAAGCAACGGTGCTTGCCTGAGAATATCATCGTGAATATGGG
CCCGGGGGCGCGGGTGCCACCGTGTCCCCTCCCGGGACATGCGTGGGACC
GAGTGCAGCACGACAACAAGGTAACGTGGCTAGCGAGCTGGAAGGAAAAC
GTTCTGAACGGCGTCAAGTACGTCATGCTCTCGGCGTCGTCCTCGTTCAA
AGGCAAGTCGGACATGGAGAAATATGACAAAGCGGCACGGTTGAAAGAGT
GCATAGAGAAGATCCGTCGGGATTACGAATCCAATCTAGGGAAAAAAGCC
GAGCGGTCCGCGAAGCAGATTGCGACCGCCATGTTCATCATCGACAAGCT
GGCTCTGAGGGTGGGGGGGGAGAAGGGAGAGGACGAGGCGGATACGGTAG
GGTGTTGTTCGCTCCGGGTGGAGCACATGAAATTTCCTCCGGCAGAGGAA
GGAGGGGGGGAGGGAGGGGCAGGGAAGTATGAGATCGAGTTGGAGTTCTT
GGGGAAAGATTCGATGTTGTTCAAGCAGACAATTGATTTCGCGAGTTACG
GGGAGCATGGGAAGCAAGTCTTTCGGAACCTGCGGCATTTCGTGAAGGAG
AAGAAGCCAGAGCAGGACGTGTTTGAAACGCTAACCCCGGCGGTATTAAA
CGCCCACTTAAGCAGCCTTATGCCGGGCTTGTCGGCCAAGGTGTTTAGGA
CGTACAACGCGTCGGAAACCCTCCAGAATGAGTTGCCGACCCCAGAAGAC
TTGGCCGGGATGAGCGTCGCGGACAAGGTGGTGGCTTACAACGAGGCGAA
CCGGAAGGTGGCCATCCTGTGCAACCACCAACGGACGGTGACCAAGGGGA
TGGAGGCGGCCCTGGGGAACCTGCAGGAGAGGCTGGCGTTGCTGATGGAG
CAGACGAAGGAGTTGAAGCAACAGAAGGAGATGATCAAGAGCGGCAAGAC
GGGTAAAATTCGAACGCGGAAAGACGACGTCATGACGGATAAGGTGGCCA
AGGCCCTGGAGAAAGCGGAGGCGTTGAGAAAAAAGGCCGTTACGCCCGAA
GAGAAGGTCAAGGCCTCTCAAGCATTGGACGAGGCCAAGGAATTGAAACG
CGCGGCTCAGGCGTGGAAAGCGAAGGATGCGCATTTGTTTGCCAGGGTGC
CTACCAAGGAGCAGGTGGACAGGAAGATAGAGCAGTGGCGAGAAAAAGTC
ACTAAGCTCGAGGTCGATATCCGCAACAAGGACGAGAACAAGGAGGTGGC
CCTGGGGACGAGTAAAATTAATTACATGGATCCGAGGATTTCAGTAGCGT
GGTGTAAGCGGGTGGAGGTGCCAATCGAGCGTGTGTTTGCCAAGACATTG
CGGGATAAGTTTGTATGGGCCATGGGGGTGCCCCCGGGCTGGAGATTCGA
GGGGTCGAAGAAATAG

Synonyms

Publications