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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr9 | genome | chr9:483364..484794 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO09G01530.1 vs.
Match: XP_005856245.1 (abl-philin protein, partial [Nannochloropsis gaditana CCMP526]; EKU20112.1 abl-philin protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 445.3 bits (1144), Expect = 2.400e-121 Identity = 251/463 (54.21%), Postives = 312/463 (67.39%), Query Frame = 0
Query: 21 SQSPYHNPS-GPPSQLEQFKAALHSNRPFEYGYWISVGLASLFDGAMRALGPCLVVLACVLIGLVTWLYYGYLLLEFVG-QDLTSNKERHTSTSYFTMERILHGGFTGFLLFNTLYNYFYCVMTSPGTPSTPHPPSQPITTTSTTSLYEESSSSLSHAVDDATAAGAAQACLMAANSTGGVDPKTYGFCKKCRIPRPPRAHHCHVCKHCVLGMDHHCPWVGQCVGYFNYRYFVLFMAYLWTACLYGTLLLARPFLGMVYGTGGGSRPRMPVIIGPLASARSAIIFTFVLSLSVGLALSGLLGWHLFLISTGQTTIEFYINKARRERARLRGGSYTNPYDMGFRKNWQQVLGTELSLWRAVLPSSRLPP-PMRYRGG---WEREEGKEDFEQE--VELGMMEGLEEGREEERGIKDSRRGGRREGERREGVTAGAGGGRNRGRRRSGGEGAEMGEGERDLSYVI 476
S P+ +PS G P Q QFK+ALHS+RPFEYGYW+SVG+++LFD A+RALGPCLV LAC+LIGLVT LY+GY+L E VG + + + Y + R++HG + FLLFNTL+NYF+CVMTSPG+P ++ + E + HA + T + +++ + VD +TYGFCKKCR PRPPR HHCHVCK CVL MDHHCPW+GQCVGY+NYRYFVLFM YLW AC+YG LLL RPFL M+YG+ G PRMPVI+G LASARSAII TFVL+ SVGLAL+GLLGWH+FLI+TGQTTIEFYINKARRERAR RG YTNP+D+G R+NWQQV G +L WR++LPS+RLPP P GG + + G E E+ E + +EEG EEE + GG A G G+ RRR GG + +R+ S +I
Sbjct: 28 SHQPHTHPSSGAPCQWAQFKSALHSDRPFEYGYWLSVGVSTLFDWAVRALGPCLVTLACLLIGLVTCLYFGYILPELVGCRGKSGSGVEDPDVRYLCLARVIHGSWAAFLLFNTLFNYFHCVMTSPGSPFVN-------ACDASMHSHGEIQAPSVHA-NAGTPTDSHSPLHVSSARSDHVDARTYGFCKKCRTPRPPRTHHCHVCKSCVLKMDHHCPWIGQCVGYYNYRYFVLFMMYLWAACVYGALLLGRPFLDMMYGSSQGGGPRMPVIVGSLASARSAIILTFVLAFSVGLALTGLLGWHVFLITTGQTTIEFYINKARRERARQRGFLYTNPHDLGSRQNWQQVFGRDLPWWRSLLPSTRLPPAPGVGPGGPDPGQEKAGAEPREEAWWAEEHRLSAMEEGEEEEEEEMITCDGGE---------CAVLGEGKRGNRRRGGGAAVPAKKWKRNGSRMI 473
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO09G01530.1 ID=NO09G01530.1|Name=NO09G01530.1|organism=Nannochloropsis oceanica|type=mRNA|length=1431bp ATGGGGCCGCAATTACTCCCAACGCAGCTGCCACCATCACCACAACAGGT CGCATTCCGATCACAATCCCCATACCACAACCCTTCCGGTCCACCAAGCC AATTGGAACAATTCAAGGCAGCTCTGCACTCGAACCGGCCATTTGAGTAT GGTTATTGGATTTCGGTTGGTCTTGCTTCGTTGTTTGACGGGGCCATGCG TGCATTGGGTCCGTGCCTTGTCGTGCTCGCCTGCGTGTTGATCGGCCTGG TCACGTGGCTCTACTACGGCTACTTACTCCTTGAATTCGTAGGTCAGGAC TTGACGTCTAATAAAGAACGTCACACCTCGACTTCCTACTTTACCATGGA GCGAATTCTGCATGGGGGCTTCACGGGCTTCTTGCTGTTCAACACCCTCT ATAACTACTTCTACTGCGTCATGACCTCCCCTGGCACCCCCTCCACTCCA CACCCTCCATCACAACCCATCACAACCACCAGCACTACCTCTCTCTACGA AGAGAGCAGCAGTAGTCTCTCCCACGCGGTTGACGACGCAACTGCCGCAG GGGCGGCGCAAGCCTGTCTTATGGCTGCGAACAGCACTGGGGGTGTTGAC CCCAAAACGTACGGGTTCTGTAAAAAATGCCGGATCCCCCGCCCGCCCCG TGCGCACCACTGCCATGTTTGCAAGCACTGCGTATTGGGGATGGACCATC ATTGTCCTTGGGTTGGTCAGTGTGTCGGGTATTTTAATTATCGTTACTTC GTGCTATTTATGGCTTATTTGTGGACAGCGTGTCTATATGGTACTCTATT GCTAGCCCGTCCTTTCCTTGGAATGGTGTATGGGACTGGAGGTGGGAGTA GGCCACGCATGCCTGTCATTATCGGTCCATTGGCCTCTGCGAGATCGGCG ATTATTTTTACGTTCGTCTTGTCTCTGTCGGTGGGTCTGGCCCTGTCGGG GTTATTGGGGTGGCATCTGTTTTTGATATCGACGGGACAGACCACGATTG AATTTTACATCAACAAAGCACGGAGAGAGCGAGCGAGGCTAAGAGGGGGC TCTTACACCAACCCATATGATATGGGGTTCAGAAAAAATTGGCAGCAGGT GTTAGGAACTGAATTATCGTTGTGGAGGGCCGTGCTGCCTTCTAGTAGGT TGCCTCCGCCGATGCGATATAGAGGGGGATGGGAAAGGGAAGAAGGCAAG GAGGATTTTGAACAAGAGGTAGAGTTGGGGATGATGGAAGGTTTGGAGGA AGGGAGGGAGGAGGAGCGGGGGATAAAGGATTCTCGGAGAGGAGGAAGAA GGGAGGGAGAGAGGAGGGAAGGGGTGACAGCAGGGGCTGGGGGGGGACGA AATCGAGGACGGAGAAGGAGTGGGGGAGAGGGTGCTGAAATGGGAGAAGG AGAGCGAGACTTGTCTTATGTGATAGTGTAA back to topprotein sequence of NO09G01530.1 >NO09G01530.1-protein ID=NO09G01530.1-protein|Name=NO09G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=477bp MGPQLLPTQLPPSPQQVAFRSQSPYHNPSGPPSQLEQFKAALHSNRPFEY GYWISVGLASLFDGAMRALGPCLVVLACVLIGLVTWLYYGYLLLEFVGQD LTSNKERHTSTSYFTMERILHGGFTGFLLFNTLYNYFYCVMTSPGTPSTP HPPSQPITTTSTTSLYEESSSSLSHAVDDATAAGAAQACLMAANSTGGVD PKTYGFCKKCRIPRPPRAHHCHVCKHCVLGMDHHCPWVGQCVGYFNYRYF VLFMAYLWTACLYGTLLLARPFLGMVYGTGGGSRPRMPVIIGPLASARSA IIFTFVLSLSVGLALSGLLGWHLFLISTGQTTIEFYINKARRERARLRGG SYTNPYDMGFRKNWQQVLGTELSLWRAVLPSSRLPPPMRYRGGWEREEGK EDFEQEVELGMMEGLEEGREEERGIKDSRRGGRREGERREGVTAGAGGGR NRGRRRSGGEGAEMGEGERDLSYVIV* back to topmRNA from alignment at chr9:483364..484794+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO09G01530.1 ID=NO09G01530.1|Name=NO09G01530.1|organism=Nannochloropsis oceanica|type=mRNA|length=1431bp|location=Sequence derived from alignment at chr9:483364..484794+ (Nannochloropsis oceanica) ATGGGGCCGCAATTACTCCCAACGCAGCTGCCACCATCACCACAACAGGT
CGCATTCCGATCACAATCCCCATACCACAACCCTTCCGGTCCACCAAGCC
AATTGGAACAATTCAAGGCAGCTCTGCACTCGAACCGGCCATTTGAGTAT
GGTTATTGGATTTCGGTTGGTCTTGCTTCGTTGTTTGACGGGGCCATGCG
TGCATTGGGTCCGTGCCTTGTCGTGCTCGCCTGCGTGTTGATCGGCCTGG
TCACGTGGCTCTACTACGGCTACTTACTCCTTGAATTCGTAGGTCAGGAC
TTGACGTCTAATAAAGAACGTCACACCTCGACTTCCTACTTTACCATGGA
GCGAATTCTGCATGGGGGCTTCACGGGCTTCTTGCTGTTCAACACCCTCT
ATAACTACTTCTACTGCGTCATGACCTCCCCTGGCACCCCCTCCACTCCA
CACCCTCCATCACAACCCATCACAACCACCAGCACTACCTCTCTCTACGA
AGAGAGCAGCAGTAGTCTCTCCCACGCGGTTGACGACGCAACTGCCGCAG
GGGCGGCGCAAGCCTGTCTTATGGCTGCGAACAGCACTGGGGGTGTTGAC
CCCAAAACGTACGGGTTCTGTAAAAAATGCCGGATCCCCCGCCCGCCCCG
TGCGCACCACTGCCATGTTTGCAAGCACTGCGTATTGGGGATGGACCATC
ATTGTCCTTGGGTTGGTCAGTGTGTCGGGTATTTTAATTATCGTTACTTC
GTGCTATTTATGGCTTATTTGTGGACAGCGTGTCTATATGGTACTCTATT
GCTAGCCCGTCCTTTCCTTGGAATGGTGTATGGGACTGGAGGTGGGAGTA
GGCCACGCATGCCTGTCATTATCGGTCCATTGGCCTCTGCGAGATCGGCG
ATTATTTTTACGTTCGTCTTGTCTCTGTCGGTGGGTCTGGCCCTGTCGGG
GTTATTGGGGTGGCATCTGTTTTTGATATCGACGGGACAGACCACGATTG
AATTTTACATCAACAAAGCACGGAGAGAGCGAGCGAGGCTAAGAGGGGGC
TCTTACACCAACCCATATGATATGGGGTTCAGAAAAAATTGGCAGCAGGT
GTTAGGAACTGAATTATCGTTGTGGAGGGCCGTGCTGCCTTCTAGTAGGT
TGCCTCCGCCGATGCGATATAGAGGGGGATGGGAAAGGGAAGAAGGCAAG
GAGGATTTTGAACAAGAGGTAGAGTTGGGGATGATGGAAGGTTTGGAGGA
AGGGAGGGAGGAGGAGCGGGGGATAAAGGATTCTCGGAGAGGAGGAAGAA
GGGAGGGAGAGAGGAGGGAAGGGGTGACAGCAGGGGCTGGGGGGGGACGA
AATCGAGGACGGAGAAGGAGTGGGGGAGAGGGTGCTGAAATGGGAGAAGG
AGAGCGAGACTTGTCTTATGTGATAGTGTAA back to topCoding sequence (CDS) from alignment at chr9:483364..484794+ >NO09G01530.1 ID=NO09G01530.1|Name=NO09G01530.1|organism=Nannochloropsis oceanica|type=CDS|length=1431bp|location=Sequence derived from alignment at chr9:483364..484794+ (Nannochloropsis oceanica) ATGGGGCCGCAATTACTCCCAACGCAGCTGCCACCATCACCACAACAGGT CGCATTCCGATCACAATCCCCATACCACAACCCTTCCGGTCCACCAAGCC AATTGGAACAATTCAAGGCAGCTCTGCACTCGAACCGGCCATTTGAGTAT GGTTATTGGATTTCGGTTGGTCTTGCTTCGTTGTTTGACGGGGCCATGCG TGCATTGGGTCCGTGCCTTGTCGTGCTCGCCTGCGTGTTGATCGGCCTGG TCACGTGGCTCTACTACGGCTACTTACTCCTTGAATTCGTAGGTCAGGAC TTGACGTCTAATAAAGAACGTCACACCTCGACTTCCTACTTTACCATGGA GCGAATTCTGCATGGGGGCTTCACGGGCTTCTTGCTGTTCAACACCCTCT ATAACTACTTCTACTGCGTCATGACCTCCCCTGGCACCCCCTCCACTCCA CACCCTCCATCACAACCCATCACAACCACCAGCACTACCTCTCTCTACGA AGAGAGCAGCAGTAGTCTCTCCCACGCGGTTGACGACGCAACTGCCGCAG GGGCGGCGCAAGCCTGTCTTATGGCTGCGAACAGCACTGGGGGTGTTGAC CCCAAAACGTACGGGTTCTGTAAAAAATGCCGGATCCCCCGCCCGCCCCG TGCGCACCACTGCCATGTTTGCAAGCACTGCGTATTGGGGATGGACCATC ATTGTCCTTGGGTTGGTCAGTGTGTCGGGTATTTTAATTATCGTTACTTC GTGCTATTTATGGCTTATTTGTGGACAGCGTGTCTATATGGTACTCTATT GCTAGCCCGTCCTTTCCTTGGAATGGTGTATGGGACTGGAGGTGGGAGTA GGCCACGCATGCCTGTCATTATCGGTCCATTGGCCTCTGCGAGATCGGCG ATTATTTTTACGTTCGTCTTGTCTCTGTCGGTGGGTCTGGCCCTGTCGGG GTTATTGGGGTGGCATCTGTTTTTGATATCGACGGGACAGACCACGATTG AATTTTACATCAACAAAGCACGGAGAGAGCGAGCGAGGCTAAGAGGGGGC TCTTACACCAACCCATATGATATGGGGTTCAGAAAAAATTGGCAGCAGGT GTTAGGAACTGAATTATCGTTGTGGAGGGCCGTGCTGCCTTCTAGTAGGT TGCCTCCGCCGATGCGATATAGAGGGGGATGGGAAAGGGAAGAAGGCAAG GAGGATTTTGAACAAGAGGTAGAGTTGGGGATGATGGAAGGTTTGGAGGA AGGGAGGGAGGAGGAGCGGGGGATAAAGGATTCTCGGAGAGGAGGAAGAA GGGAGGGAGAGAGGAGGGAAGGGGTGACAGCAGGGGCTGGGGGGGGACGA AATCGAGGACGGAGAAGGAGTGGGGGAGAGGGTGCTGAAATGGGAGAAGG AGAGCGAGACTTGTCTTATGTGATAGTGTAA back to top
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