NO09G01530.1, NO09G01530.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G01530.1
Unique NameNO09G01530.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1431
Alignment locationchr9:483364..484794 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:483364..484794 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO09G01530.1 vs.
Match: XP_005856245.1 (abl-philin protein, partial [Nannochloropsis gaditana CCMP526]; EKU20112.1 abl-philin protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 445.3 bits (1144), Expect = 2.400e-121
Identity = 251/463 (54.21%), Postives = 312/463 (67.39%), Query Frame = 0
Query:   21 SQSPYHNPS-GPPSQLEQFKAALHSNRPFEYGYWISVGLASLFDGAMRALGPCLVVLACVLIGLVTWLYYGYLLLEFVG-QDLTSNKERHTSTSYFTMERILHGGFTGFLLFNTLYNYFYCVMTSPGTPSTPHPPSQPITTTSTTSLYEESSSSLSHAVDDATAAGAAQACLMAANSTGGVDPKTYGFCKKCRIPRPPRAHHCHVCKHCVLGMDHHCPWVGQCVGYFNYRYFVLFMAYLWTACLYGTLLLARPFLGMVYGTGGGSRPRMPVIIGPLASARSAIIFTFVLSLSVGLALSGLLGWHLFLISTGQTTIEFYINKARRERARLRGGSYTNPYDMGFRKNWQQVLGTELSLWRAVLPSSRLPP-PMRYRGG---WEREEGKEDFEQE--VELGMMEGLEEGREEERGIKDSRRGGRREGERREGVTAGAGGGRNRGRRRSGGEGAEMGEGERDLSYVI 476
            S  P+ +PS G P Q  QFK+ALHS+RPFEYGYW+SVG+++LFD A+RALGPCLV LAC+LIGLVT LY+GY+L E VG +  + +        Y  + R++HG +  FLLFNTL+NYF+CVMTSPG+P             ++   + E  +   HA +  T   +     +++  +  VD +TYGFCKKCR PRPPR HHCHVCK CVL MDHHCPW+GQCVGY+NYRYFVLFM YLW AC+YG LLL RPFL M+YG+  G  PRMPVI+G LASARSAII TFVL+ SVGLAL+GLLGWH+FLI+TGQTTIEFYINKARRERAR RG  YTNP+D+G R+NWQQV G +L  WR++LPS+RLPP P    GG    + + G E  E+    E   +  +EEG EEE     +  GG           A  G G+   RRR GG      + +R+ S +I
Sbjct:   28 SHQPHTHPSSGAPCQWAQFKSALHSDRPFEYGYWLSVGVSTLFDWAVRALGPCLVTLACLLIGLVTCLYFGYILPELVGCRGKSGSGVEDPDVRYLCLARVIHGSWAAFLLFNTLFNYFHCVMTSPGSPFVN-------ACDASMHSHGEIQAPSVHA-NAGTPTDSHSPLHVSSARSDHVDARTYGFCKKCRTPRPPRTHHCHVCKSCVLKMDHHCPWIGQCVGYYNYRYFVLFMMYLWAACVYGALLLGRPFLDMMYGSSQGGGPRMPVIVGSLASARSAIILTFVLAFSVGLALTGLLGWHVFLITTGQTTIEFYINKARRERARQRGFLYTNPHDLGSRQNWQQVFGRDLPWWRSLLPSTRLPPAPGVGPGGPDPGQEKAGAEPREEAWWAEEHRLSAMEEGEEEEEEEMITCDGGE---------CAVLGEGKRGNRRRGGGAAVPAKKWKRNGSRMI 473          
The following BLAST results are available for this feature:
BLAST of NO09G01530.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_005856245.12.400e-12154.21abl-philin protein, partial [Nannochloropsis gadit... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G01530NO09G01530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G01530.1NO09G01530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G01530.1.cds1NO09G01530.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G01530.1 ID=NO09G01530.1|Name=NO09G01530.1|organism=Nannochloropsis oceanica|type=mRNA|length=1431bp
ATGGGGCCGCAATTACTCCCAACGCAGCTGCCACCATCACCACAACAGGT
CGCATTCCGATCACAATCCCCATACCACAACCCTTCCGGTCCACCAAGCC
AATTGGAACAATTCAAGGCAGCTCTGCACTCGAACCGGCCATTTGAGTAT
GGTTATTGGATTTCGGTTGGTCTTGCTTCGTTGTTTGACGGGGCCATGCG
TGCATTGGGTCCGTGCCTTGTCGTGCTCGCCTGCGTGTTGATCGGCCTGG
TCACGTGGCTCTACTACGGCTACTTACTCCTTGAATTCGTAGGTCAGGAC
TTGACGTCTAATAAAGAACGTCACACCTCGACTTCCTACTTTACCATGGA
GCGAATTCTGCATGGGGGCTTCACGGGCTTCTTGCTGTTCAACACCCTCT
ATAACTACTTCTACTGCGTCATGACCTCCCCTGGCACCCCCTCCACTCCA
CACCCTCCATCACAACCCATCACAACCACCAGCACTACCTCTCTCTACGA
AGAGAGCAGCAGTAGTCTCTCCCACGCGGTTGACGACGCAACTGCCGCAG
GGGCGGCGCAAGCCTGTCTTATGGCTGCGAACAGCACTGGGGGTGTTGAC
CCCAAAACGTACGGGTTCTGTAAAAAATGCCGGATCCCCCGCCCGCCCCG
TGCGCACCACTGCCATGTTTGCAAGCACTGCGTATTGGGGATGGACCATC
ATTGTCCTTGGGTTGGTCAGTGTGTCGGGTATTTTAATTATCGTTACTTC
GTGCTATTTATGGCTTATTTGTGGACAGCGTGTCTATATGGTACTCTATT
GCTAGCCCGTCCTTTCCTTGGAATGGTGTATGGGACTGGAGGTGGGAGTA
GGCCACGCATGCCTGTCATTATCGGTCCATTGGCCTCTGCGAGATCGGCG
ATTATTTTTACGTTCGTCTTGTCTCTGTCGGTGGGTCTGGCCCTGTCGGG
GTTATTGGGGTGGCATCTGTTTTTGATATCGACGGGACAGACCACGATTG
AATTTTACATCAACAAAGCACGGAGAGAGCGAGCGAGGCTAAGAGGGGGC
TCTTACACCAACCCATATGATATGGGGTTCAGAAAAAATTGGCAGCAGGT
GTTAGGAACTGAATTATCGTTGTGGAGGGCCGTGCTGCCTTCTAGTAGGT
TGCCTCCGCCGATGCGATATAGAGGGGGATGGGAAAGGGAAGAAGGCAAG
GAGGATTTTGAACAAGAGGTAGAGTTGGGGATGATGGAAGGTTTGGAGGA
AGGGAGGGAGGAGGAGCGGGGGATAAAGGATTCTCGGAGAGGAGGAAGAA
GGGAGGGAGAGAGGAGGGAAGGGGTGACAGCAGGGGCTGGGGGGGGACGA
AATCGAGGACGGAGAAGGAGTGGGGGAGAGGGTGCTGAAATGGGAGAAGG
AGAGCGAGACTTGTCTTATGTGATAGTGTAA
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protein sequence of NO09G01530.1

>NO09G01530.1-protein ID=NO09G01530.1-protein|Name=NO09G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=477bp
MGPQLLPTQLPPSPQQVAFRSQSPYHNPSGPPSQLEQFKAALHSNRPFEY
GYWISVGLASLFDGAMRALGPCLVVLACVLIGLVTWLYYGYLLLEFVGQD
LTSNKERHTSTSYFTMERILHGGFTGFLLFNTLYNYFYCVMTSPGTPSTP
HPPSQPITTTSTTSLYEESSSSLSHAVDDATAAGAAQACLMAANSTGGVD
PKTYGFCKKCRIPRPPRAHHCHVCKHCVLGMDHHCPWVGQCVGYFNYRYF
VLFMAYLWTACLYGTLLLARPFLGMVYGTGGGSRPRMPVIIGPLASARSA
IIFTFVLSLSVGLALSGLLGWHLFLISTGQTTIEFYINKARRERARLRGG
SYTNPYDMGFRKNWQQVLGTELSLWRAVLPSSRLPPPMRYRGGWEREEGK
EDFEQEVELGMMEGLEEGREEERGIKDSRRGGRREGERREGVTAGAGGGR
NRGRRRSGGEGAEMGEGERDLSYVIV*
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mRNA from alignment at chr9:483364..484794+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G01530.1 ID=NO09G01530.1|Name=NO09G01530.1|organism=Nannochloropsis oceanica|type=mRNA|length=1431bp|location=Sequence derived from alignment at chr9:483364..484794+ (Nannochloropsis oceanica)
ATGGGGCCGCAATTACTCCCAACGCAGCTGCCACCATCACCACAACAGGT CGCATTCCGATCACAATCCCCATACCACAACCCTTCCGGTCCACCAAGCC AATTGGAACAATTCAAGGCAGCTCTGCACTCGAACCGGCCATTTGAGTAT GGTTATTGGATTTCGGTTGGTCTTGCTTCGTTGTTTGACGGGGCCATGCG TGCATTGGGTCCGTGCCTTGTCGTGCTCGCCTGCGTGTTGATCGGCCTGG TCACGTGGCTCTACTACGGCTACTTACTCCTTGAATTCGTAGGTCAGGAC TTGACGTCTAATAAAGAACGTCACACCTCGACTTCCTACTTTACCATGGA GCGAATTCTGCATGGGGGCTTCACGGGCTTCTTGCTGTTCAACACCCTCT ATAACTACTTCTACTGCGTCATGACCTCCCCTGGCACCCCCTCCACTCCA CACCCTCCATCACAACCCATCACAACCACCAGCACTACCTCTCTCTACGA AGAGAGCAGCAGTAGTCTCTCCCACGCGGTTGACGACGCAACTGCCGCAG GGGCGGCGCAAGCCTGTCTTATGGCTGCGAACAGCACTGGGGGTGTTGAC CCCAAAACGTACGGGTTCTGTAAAAAATGCCGGATCCCCCGCCCGCCCCG TGCGCACCACTGCCATGTTTGCAAGCACTGCGTATTGGGGATGGACCATC ATTGTCCTTGGGTTGGTCAGTGTGTCGGGTATTTTAATTATCGTTACTTC GTGCTATTTATGGCTTATTTGTGGACAGCGTGTCTATATGGTACTCTATT GCTAGCCCGTCCTTTCCTTGGAATGGTGTATGGGACTGGAGGTGGGAGTA GGCCACGCATGCCTGTCATTATCGGTCCATTGGCCTCTGCGAGATCGGCG ATTATTTTTACGTTCGTCTTGTCTCTGTCGGTGGGTCTGGCCCTGTCGGG GTTATTGGGGTGGCATCTGTTTTTGATATCGACGGGACAGACCACGATTG AATTTTACATCAACAAAGCACGGAGAGAGCGAGCGAGGCTAAGAGGGGGC TCTTACACCAACCCATATGATATGGGGTTCAGAAAAAATTGGCAGCAGGT GTTAGGAACTGAATTATCGTTGTGGAGGGCCGTGCTGCCTTCTAGTAGGT TGCCTCCGCCGATGCGATATAGAGGGGGATGGGAAAGGGAAGAAGGCAAG GAGGATTTTGAACAAGAGGTAGAGTTGGGGATGATGGAAGGTTTGGAGGA AGGGAGGGAGGAGGAGCGGGGGATAAAGGATTCTCGGAGAGGAGGAAGAA GGGAGGGAGAGAGGAGGGAAGGGGTGACAGCAGGGGCTGGGGGGGGACGA AATCGAGGACGGAGAAGGAGTGGGGGAGAGGGTGCTGAAATGGGAGAAGG AGAGCGAGACTTGTCTTATGTGATAGTGTAA
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Coding sequence (CDS) from alignment at chr9:483364..484794+

>NO09G01530.1 ID=NO09G01530.1|Name=NO09G01530.1|organism=Nannochloropsis oceanica|type=CDS|length=1431bp|location=Sequence derived from alignment at chr9:483364..484794+ (Nannochloropsis oceanica)
ATGGGGCCGCAATTACTCCCAACGCAGCTGCCACCATCACCACAACAGGT
CGCATTCCGATCACAATCCCCATACCACAACCCTTCCGGTCCACCAAGCC
AATTGGAACAATTCAAGGCAGCTCTGCACTCGAACCGGCCATTTGAGTAT
GGTTATTGGATTTCGGTTGGTCTTGCTTCGTTGTTTGACGGGGCCATGCG
TGCATTGGGTCCGTGCCTTGTCGTGCTCGCCTGCGTGTTGATCGGCCTGG
TCACGTGGCTCTACTACGGCTACTTACTCCTTGAATTCGTAGGTCAGGAC
TTGACGTCTAATAAAGAACGTCACACCTCGACTTCCTACTTTACCATGGA
GCGAATTCTGCATGGGGGCTTCACGGGCTTCTTGCTGTTCAACACCCTCT
ATAACTACTTCTACTGCGTCATGACCTCCCCTGGCACCCCCTCCACTCCA
CACCCTCCATCACAACCCATCACAACCACCAGCACTACCTCTCTCTACGA
AGAGAGCAGCAGTAGTCTCTCCCACGCGGTTGACGACGCAACTGCCGCAG
GGGCGGCGCAAGCCTGTCTTATGGCTGCGAACAGCACTGGGGGTGTTGAC
CCCAAAACGTACGGGTTCTGTAAAAAATGCCGGATCCCCCGCCCGCCCCG
TGCGCACCACTGCCATGTTTGCAAGCACTGCGTATTGGGGATGGACCATC
ATTGTCCTTGGGTTGGTCAGTGTGTCGGGTATTTTAATTATCGTTACTTC
GTGCTATTTATGGCTTATTTGTGGACAGCGTGTCTATATGGTACTCTATT
GCTAGCCCGTCCTTTCCTTGGAATGGTGTATGGGACTGGAGGTGGGAGTA
GGCCACGCATGCCTGTCATTATCGGTCCATTGGCCTCTGCGAGATCGGCG
ATTATTTTTACGTTCGTCTTGTCTCTGTCGGTGGGTCTGGCCCTGTCGGG
GTTATTGGGGTGGCATCTGTTTTTGATATCGACGGGACAGACCACGATTG
AATTTTACATCAACAAAGCACGGAGAGAGCGAGCGAGGCTAAGAGGGGGC
TCTTACACCAACCCATATGATATGGGGTTCAGAAAAAATTGGCAGCAGGT
GTTAGGAACTGAATTATCGTTGTGGAGGGCCGTGCTGCCTTCTAGTAGGT
TGCCTCCGCCGATGCGATATAGAGGGGGATGGGAAAGGGAAGAAGGCAAG
GAGGATTTTGAACAAGAGGTAGAGTTGGGGATGATGGAAGGTTTGGAGGA
AGGGAGGGAGGAGGAGCGGGGGATAAAGGATTCTCGGAGAGGAGGAAGAA
GGGAGGGAGAGAGGAGGGAAGGGGTGACAGCAGGGGCTGGGGGGGGACGA
AATCGAGGACGGAGAAGGAGTGGGGGAGAGGGTGCTGAAATGGGAGAAGG
AGAGCGAGACTTGTCTTATGTGATAGTGTAA
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Synonyms
Publications