NO09G01280.1, NO09G01280.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G01280.1
Unique Name	NO09G01280.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3989
Alignment location	chr9:409300..413719 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:409300..413719 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO09G01280.1 vs.
Match: EWM27628.1 (atp-dependent rna helicase dhx57 [Nannochloropsis gaditana])

HSP 1 Score: 1709.9 bits (4427), Expect = 0.000e+0
Identity = 961/1256 (76.51%), Postives = 1069/1256 (85.11%), Query Frame = 0

Query:    1 MGRGPNAGGGRGRREFVAPGGA-RGGRDGSRRGSSRGGGSRGGRGTGGGLGGGGGGGKGGGRGDGGSSRGGFDTGHG---GRGVEGGGGGNGSAITKSNVVIGAENQRLMLELLEKLHLTDDDGEDGIGGPELLSLLVKEEKRVFLEENILNAVKKKTVVERQREQQQRASRGRPSKVQVIICAWHHPETTRKRVVLGRVPNLTTLFNAARETLLIKRPKAAFNLETGFYISDTMAVEEGTVICVTTKMPEVSGVPIPGGGGTVVVPLTAAEKLVKKEKAELTKAAMVEAEQRKLEEIKEVYRVRASKRALAGKKRQERSAADIQALSRMLKQRLERVKGTEAYSDMLRTRGSLPIWAKREAIVRLVDENSVVVLSGATGSGKSTQVPQFLLDYYIEGNRGSEVNILVTQPRRISAISLCERVATERCEEVGQTVGYSIRLENRISGATALTFVTTGLLLRRLQEDPELQGVSHVVIDEVHERDIHSDFLLIIMRELLDRRNDLKLILMSATLQADLFQKYFGNCPAIHVQGRTFPVRHIFLEDIESKLATVKSIPGMGYCAGGGGCGGGGGGGRGGGRDGGSGGRGKMEGGRGGFDGRDQRRGSNGSLNRNGKGHSSGSIGPPIISPKADDPIDYVLILNLLTLLVAMREADDSEVGGAVLVFFSGFQEINELCKMISTHPVLGNSNRVQAFPLHSSLPSDAQRAVFRRMPKGVTKIVVATNIAETSITIDDISSVIDSGRVKEMRYDAETHMTSLVSVWTSQAAASQRAGRAGRVREGTCFRLYNKSFMEEQMPTYTLPEMLRTPLEELSLSILALELGSPAEFLARAIEPPPPEAITTAVRNLREIDALRKHKDVDTKEVSLHLTPLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPFANPFGMQQEADRAHAKYGSAMSDHIAALEAYNGWAELRDQPYRVRKEYCSENFLSIAALEQIEMLRKELRRQLEDIGFAARGPRRVYGGGSGGGGRGGRFGG---GPGGGNGGRGRRVMYDDEDEYYQDVPMERGEGRGENGWSDVTTFDENGGELDQEGRPVVDVNLIRCCLLAALYPQVGKLVRPQKPSDGATFELKDKTKVAVHPGSINFTRLMNLSPTGKDAFLLYHKKVQSTKIYTYDSTFVSPFTILLFGGEIKIQWEHGSLEGDRSIAVTMDKWLSFRMTESSAVLVKYIRHELNELLLEKFSDPVQAMEQKRKLKARAVVETIKKLLLSDRNSLGI 1250
            MGRGPNAGGGRGRREFVA GGA RGGR G  RGS R  G  GGRG   G GGG  G     RG GGSS GG     G   G G   GGG +G+ + K++VVIGAEN+RLMLELL++LHLTD DG+DG+GG ELL+LL+KEEKRVFLE N++NA  KK+   RQ+E Q+ A+RGR S+VQVIICAWHHPETT+KRVV+GRVPNLTTLF AAR+TL IKRPKAAF LETG Y+SDTMAVE+ TVICVTTK+PE +GVP+PGGGG +V+PLT AE+  ++E+ E +KAA   A+Q+KLE+IKE YRVRA +RA  GKKR ERS A+ +ALSRMLKQRLERV  T  Y +ML  R  LPIW+ RE +VRLV+EN+V+VLSGATGSGKSTQVPQFLLD+YIEG RGS+VNILVTQPRRISAISLCERVA ERC EVG+ VGYSIRLE R+S +TALTFVTTGLLLRRLQEDP+LQGVSHVVIDEVHERDIHSDFLLIIM+ELL+RR  LKLILMSATLQADLFQ+YFGNCPA+HV GRTFPVRH+FLEDIE+KLA+VKS+PGM    GG G  G GGGGRGGGR  G GGRG   GGRG   G++ R+ SNGSL   G  + +G  GPP+ISPKA+DPIDY LI+ LLTLLV +READD+EVGGAVLVFFSGFQEINELCK+++ H VLGN  RVQA+PLHSSLPSDAQRAVFRRMPKGVTKIVVATNIAETSITIDDISSVIDSGRVKEMRYDAETHM+SLVSVWTSQAAASQRAGRAGRVREGTCFRLY+KSFME QMP YTLPEMLRTPLEELSL+ILALELGSPA+FLARAIEPPPPEAI+TAV+NLREIDALRK KD+DTKEVS +L PLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPF+NPFGMQQEADRAHAKYGSA+SDHIAALEAYNGWAELR++PYRVRK+YC+ENFLSIA LEQIE LRKELRRQL DIGF A  PR++YGGG G  GR G+ GG     GGG G  G R   D++    Q     R    G N   D  T D+ GG  D +G P +DVNLIRCCL AALYPQVGKLVRPQK  +GATFEL+DKTKVAVHPGSINFTRLMNL+P+GKDAFLLYHKKVQSTKIY YDSTFVSPFTILLFGG+IKIQWEHGSLEGD+SIAVTMD WLSFRMT SSAVLVKYIRHELN+LLLEKFSDPVQAME+KRK KA+AVV++IK+LL SDRNSLGI
Sbjct:    1 MGRGPNAGGGRGRREFVARGGAGRGGRGG--RGSGRAAG--GGRG---GRGGGESGRVSSDRGRGGSSSGGGGGASGRNPGGGGGAGGGRDGAGLKKNHVVIGAENKRLMLELLKQLHLTDGDGDDGMGGAELLNLLLKEEKRVFLENNLVNAATKKSAAVRQKEAQRLATRGRSSRVQVIICAWHHPETTQKRVVVGRVPNLTTLFEAARDTLFIKRPKAAFVLETGLYLSDTMAVEQDTVICVTTKVPEAAGVPLPGGGG-LVLPLTPAERAARREEMEQSKAAAAAADQQKLEDIKEGYRVRAIRRAAGGKKRHERSPAESEALSRMLKQRLERVMETRGYREMLWARERLPIWSMREEVVRLVEENTVIVLSGATGSGKSTQVPQFLLDHYIEGGRGSQVNILVTQPRRISAISLCERVAAERCVEVGRDVGYSIRLEARVSDSTALTFVTTGLLLRRLQEDPDLQGVSHVVIDEVHERDIHSDFLLIIMQELLERRKGLKLILMSATLQADLFQEYFGNCPAVHVPGRTFPVRHVFLEDIEAKLASVKSVPGMSQ--GGVGGNGRGGGGRGGGRGRGLGGRGN-GGGRG--LGKEHRQLSNGSLKGIGNENGNGVAGPPLISPKAEDPIDYQLIVKLLTLLVTIREADDNEVGGAVLVFFSGFQEINELCKLMAAHAVLGNPKRVQAYPLHSSLPSDAQRAVFRRMPKGVTKIVVATNIAETSITIDDISSVIDSGRVKEMRYDAETHMSSLVSVWTSQAAASQRAGRAGRVREGTCFRLYSKSFMEAQMPKYTLPEMLRTPLEELSLTILALELGSPADFLARAIEPPPPEAISTAVKNLREIDALRKQKDLDTKEVSYYLMPLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPFSNPFGMQQEADRAHAKYGSALSDHIAALEAYNGWAELRNEPYRVRKDYCTENFLSIATLEQIEALRKELRRQLIDIGFGAGEPRKMYGGGRGAAGRAGQPGGRGNAEGGGGGCDGGRSNDDEKCRDNQSHKSARAVRAGAND-EDGHTVDDIGGGSDGKGTPALDVNLIRCCLFAALYPQVGKLVRPQKTGEGATFELRDKTKVAVHPGSINFTRLMNLAPSGKDAFLLYHKKVQSTKIYAYDSTFVSPFTILLFGGDIKIQWEHGSLEGDQSIAVTMDNWLSFRMTASSAVLVKYIRHELNQLLLEKFSDPVQAMEEKRKAKAQAVVQSIKRLLTSDRNSLGI 1242

The following BLAST results are available for this feature:

BLAST of NO09G01280.1 vs.

BLAST of NO09G01280.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27628.1	0.000e+0	76.51	atp-dependent rna helicase dhx57 [Nannochloropsis ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO09G01280	NO09G01280	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO09G01280.1	NO09G01280.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO09G01280.1.cds1	NO09G01280.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G01280.1.cds2	NO09G01280.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G01280.1.cds3	NO09G01280.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr9:409300..413719+
coding sequence from alignment at chr9:409300..413719+

mRNA sequence

>NO09G01280.1 ID=NO09G01280.1|Name=NO09G01280.1|organism=Nannochloropsis oceanica|type=mRNA|length=3989bp
ATGGGTCGGGGGCCCAATGCGGGAGGCGGGCGTGGAAGGCGTGAGTTCGT
AGCGCCTGGCGGAGCACGGGGTGGGCGGGACGGTAGCCGAAGAGGTAGCA
GCCGTGGTGGTGGTAGCCGTGGCGGCAGAGGGACAGGAGGAGGATTAGGA
GGAGGAGGAGGAGGAGGGAAAGGGGGAGGGCGGGGGGACGGGGGAAGCAG
CCGGGGGGGCTTTGACACTGGACATGGTGGCCGGGGGGTAGAAGGGGGAG
GGGGAGGGAACGGGTCGGCGATCACGAAAAGCAACGTGGTGATTGGTGCG
GAGAACCAGCGATTGATGCTCGAATTGCTCGAGAAGCTGCATTTGACCGA
CGATGACGGAGAGGACGGCATTGGGGGTCCCGAGCTCTTAAGCCTGCTCG
TCAAGGAAGAAAAACGCGTTTTCCTTGAGGAAAACATCTTGAATGCCGTC
AAGAAAAAGACGGTGGTCGAACGCCAACGGGAGCAGCAACAACGGGCCTC
CCGCGGACGCCCTTCCAAGGTGCAAGTCATTATCTGCGCCTGGCATCACC
CGGAAACAACCCGAAAACGCGTCGTCCTCGGCCGTGTTCCCAATCTCACC
ACCCTTTTCAATGCTGCTCGCGAAACGCTCCTCATCAAACGCCCCAAAGC
TGCTTTTAATCTCGAGACGGGGTTTTACATTTCCGACACCATGGCCGTGG
AGGAGGGTACCGTCATATGTGTCACCACCAAGATGCCTGAGGTCTCCGGG
GTGCCAATCCCAGGAGGAGGAGGAACAGTGGTCGTTCCCTTGACGGCAGC
GGAAAAATTGGTTAAGAAAGAGAAGGCTGAATTGACCAAGGCGGCGATGG
TGGAGGCGGAACAGCGGAAGCTAGAGGAGATCAAGGAGGTGTACAGGGTA
AGGGCGAGTAAAAGGGCATTAGCAGGGAAGAAGAGGCAGGAGAGGAGTGC
CGCCGATATCCAGGCACTGTCTCGGATGTTGAAGCAGAGGTTGGAGAGGG
TTAAGGGTACGGAGGCATACAGTGATATGTTGCGAACGAGGGGATCTTTA
CCCATATGGGCGAAGCGAGAAGCAATCGTGCGGTTGGTAGATGAGAATTC
TGTGGTGGTCCTGAGTGGGGCGACGGGTAGCGGGAAATCCACTCAGGTCC
CCCAATTTTTGCTCGATTATTACATAGAGGGCAATAGAGGGAGCGAAGTA
AATATCCTGGTGACGCAACCCCGGCGGATCAGTGCCATCTCGTTGTGTGA
ACGGGTAGCGACGGAGAGGTGTGAGGAGGTGGGGCAGACGGTCGGATATT
CCATTCGACTCGAGAACAGGATTTCGGGGGCTACGGCATTAACATTTGTG
ACTACGGGCTTGCTATTGAGGAGGCTGCAAGAAGATCCGGAGTTGCAGGG
GGTGTCACATGTAGTGATTGACGAAGTGCACGAGCGCGACATCCACTCTG
ACTTCCTCCTCATCATCATGCGAGAGCTGTTGGACCGTCGCAATGACCTG
AAGCTCATCCTTATGAGCGCTACGCTACAAGCTGATCTTTTCCAAAAATA
TTTCGGGAACTGTCCAGCCATTCACGTCCAAGGCCGCACCTTTCCCGTGC
GGCACATTTTTCTAGAAGACATCGAGTCGAAGCTCGCTACAGTAAAGTCC
ATTCCTGGCATGGGGTATTGTGCTGGTGGGGGAGGATGTGGAGGAGGAGG
TGGAGGAGGACGGGGTGGTGGTCGAGATGGAGGGAGTGGGGGGAGAGGGA
AAATGGAAGGAGGGCGAGGAGGCTTTGATGGGAGGGATCAAAGGAGAGGC
AGCAATGGTAGTTTGAATAGGAATGGGAAAGGCCATAGTAGTGGATCTAT
TGGTCCTCCTATTATATCCCCGAAAGCTGATGATCCAATTGATTACGTTT
TGATCCTGAACTTGCTCACGTTGCTCGTGGCCATGCGCGAGGCGGACGAC
AGCGAGGTTGGCGGTGCGGTCCTCGTCTTCTTTTCGGGTTTCCAGGAGAT
CAATGAGCTCTGCAAGATGATTAGCACGCATCCCGTCCTCGGCAACTCCA
ATCGGGTCCAGGCATTTCCTTTGCACTCCTCCCTTCCGTCTGATGCCCAG
CGGGCGGTCTTCCGACGGATGCCGAAGGGCGTCACCAAGATCGTCGTCGC
CACCAACATCGCCGAGACGTCCATTACCATCGACGATATCTCCAGCGTGA
TTGACAGTGGCCGCGTCAAAGAAATGCGTTACGATGCAGAGACACACATG
ACTTCCCTTGTCAGCGTGTGGACATCGCAAGCTGCCGCTTCCCAACGTGC
CGGCCGCGCTGGCCGCGTGCGAGAAGGAACTTGTTTCCGATTGTATAATA
AGAGCTTTATGGAAGAGCAGATGCCAACCTATACATTGCCGGAAATGCTA
CGCACGCCCTTGGAGGAATTATCGTTGTCTATCTTGGCATTAGAATTAGG
CAGCCCTGCGGAGTTTTTGGCAAGGGCCATCGAGCCCCCCCCTCCAGAGG
CGATAACGACGGCGGTGCGAAATTTGAGAGAGATTGATGCATTGCGGAAG
CACAAAGATGTAGATACTAAAGAGGTGTCACTTCATCTGACGCCGTTAGG
GTTTCATTTGGCGAATTTGCCTTGTGATGCCCGGATCGGGAAGATGTTGA
TTATTGGGTCCATTTTGGGGTGTCTGGAACCGATTTTGACGATTGCTGCG
TGTTTGAGTTACAAGAGTCCGTTTGCGAATCCATTTGGGATGCAGCAAGA
GGCAGATCGGGCCCATGCTAAATATGGATCGGCGATGTCTGACCATATTG
CGGCGTTAGAAGCTTATAATGGATGGGCGGAATTAAGGGATCAGCCTTAT
CGCGTGCGAAAAGAGTATTGCAGCGAGAATTTTTTGTCGATCGCCGCATT
GGAGCAGATTGAGATGTTACGGAAGGAGCTGAGAAGACAGTTGGAGGACA
TTGGATTTGCAGCGCGAGGGCCACGAAGGGTGTATGGTGGCGGTTCAGGA
GGAGGAGGGAGGGGTGGGCGGTTTGGAGGAGGACCGGGGGGAGGGAATGG
AGGGAGGGGTAGACGGGTCATGTATGATGATGAAGACGAGTATTATCAGG
ATGTGCCGATGGAGAGAGGCGAAGGCAGGGGGGAGAATGGGTGGAGTGAT
GTGACGACGTTTGATGAAAATGGAGGAGAGTTGGATCAGGAGGGAAGGCC
TGTGGTGGACGTGAACCTGATTCGCTGTTGCTTGCTTGCAGCATTGTATC
CTCAAGTAGGCAAGCTTGTCCGACCGCAGAAGCCGAGTGATGGGGCGACG
TTTGAGTTGAAAGATAAGACCAAGGTGGCTGTACATCCGGGTTCCATAAA
TTTTACGCGGTTAATGAACTTGTCGCCTACGGGGAAGGACGCGTTTTTGC
TGTATCACAAGAAGGTGCAATCTACTAAGATCTATACCTATGATTCGACA
TTCGTCTCGCCATTTACCATTTTGTTGTTTGGTGGGGAGATCAAGATTCA
ATGGGAGCATGGGTCGTTGGAAGGGGATCGCTCAATTGCTGTAACGATGG
ATAAGTGGCTATCTTTCCGCATGACAGAGTCAAGTGCTGTGTTGGTCAAA
TATATACGGCACGAACTCAATGAGTTATTGCTGGAGAAGTTCTCGGACCC
TGTTCAGGCGATGGAGCAAAAGCGCAAACTTAAGGCGCGGGCAGTTGTGG
AGACGATAAAGAAGCTCTTGCTTTCAGATCGGAACTCGTTGGGTATTTGA
GGTGGTTGAGGGAGGGACGGAAGGGCGGGTAGAGGGGCGTGTGAGGAAGC
GGGAGGGGGGAATGCTCTATGTAACCTCTTACATGTCTCACCTGATACTC
AAAACAAGAGTGGTATGCAAGAGAAGAAGCAATAAAATGCGCAAATGGTT
CGCCATTGTATTCCTTTGCCAAGGTAGAAAGCGGATGAGGAATATAAAGA
GGGAGACTTAAATGAACGAAATCAAATATACAATACTCA

protein sequence of NO09G01280.1

>NO09G01280.1-protein ID=NO09G01280.1-protein|Name=NO09G01280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1250bp
MGRGPNAGGGRGRREFVAPGGARGGRDGSRRGSSRGGGSRGGRGTGGGLG
GGGGGGKGGGRGDGGSSRGGFDTGHGGRGVEGGGGGNGSAITKSNVVIGA
ENQRLMLELLEKLHLTDDDGEDGIGGPELLSLLVKEEKRVFLEENILNAV
KKKTVVERQREQQQRASRGRPSKVQVIICAWHHPETTRKRVVLGRVPNLT
TLFNAARETLLIKRPKAAFNLETGFYISDTMAVEEGTVICVTTKMPEVSG
VPIPGGGGTVVVPLTAAEKLVKKEKAELTKAAMVEAEQRKLEEIKEVYRV
RASKRALAGKKRQERSAADIQALSRMLKQRLERVKGTEAYSDMLRTRGSL
PIWAKREAIVRLVDENSVVVLSGATGSGKSTQVPQFLLDYYIEGNRGSEV
NILVTQPRRISAISLCERVATERCEEVGQTVGYSIRLENRISGATALTFV
TTGLLLRRLQEDPELQGVSHVVIDEVHERDIHSDFLLIIMRELLDRRNDL
KLILMSATLQADLFQKYFGNCPAIHVQGRTFPVRHIFLEDIESKLATVKS
IPGMGYCAGGGGCGGGGGGGRGGGRDGGSGGRGKMEGGRGGFDGRDQRRG
SNGSLNRNGKGHSSGSIGPPIISPKADDPIDYVLILNLLTLLVAMREADD
SEVGGAVLVFFSGFQEINELCKMISTHPVLGNSNRVQAFPLHSSLPSDAQ
RAVFRRMPKGVTKIVVATNIAETSITIDDISSVIDSGRVKEMRYDAETHM
TSLVSVWTSQAAASQRAGRAGRVREGTCFRLYNKSFMEEQMPTYTLPEML
RTPLEELSLSILALELGSPAEFLARAIEPPPPEAITTAVRNLREIDALRK
HKDVDTKEVSLHLTPLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAA
CLSYKSPFANPFGMQQEADRAHAKYGSAMSDHIAALEAYNGWAELRDQPY
RVRKEYCSENFLSIAALEQIEMLRKELRRQLEDIGFAARGPRRVYGGGSG
GGGRGGRFGGGPGGGNGGRGRRVMYDDEDEYYQDVPMERGEGRGENGWSD
VTTFDENGGELDQEGRPVVDVNLIRCCLLAALYPQVGKLVRPQKPSDGAT
FELKDKTKVAVHPGSINFTRLMNLSPTGKDAFLLYHKKVQSTKIYTYDST
FVSPFTILLFGGEIKIQWEHGSLEGDRSIAVTMDKWLSFRMTESSAVLVK
YIRHELNELLLEKFSDPVQAMEQKRKLKARAVVETIKKLLLSDRNSLGI*

mRNA from alignment at chr9:409300..413719+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO09G01280.1 ID=NO09G01280.1|Name=NO09G01280.1|organism=Nannochloropsis oceanica|type=mRNA|length=4420bp|location=Sequence derived from alignment at chr9:409300..413719+ (Nannochloropsis oceanica)
ATGGGTCGGGGGCCCAATGCGGGAGGCGGGCGTGGAAGGCGTGAGTTCGT
AGCGCCTGGCGGAGCACGGGGTGGGCGGGACGGTAGCCGAAGAGGTAGCA
GCCGTGGTGGTGGTAGCCGTGGCGGCAGAGGGACAGGAGGAGGATTAGGA
GGAGGAGGAGGAGGAGGGAAAGGGGGAGGGCGGGGGGACGGGGGAAGCAG
CCGGGGGGGCTTTGACACTGGACATGGTGGCCGGGGGGTAGAAGGGGGAG
GGGGAGGGAACGGGTCGGCGATCACGAAAAGCAACGTGGTGATTGGTGCG
GAGAACCAGCGATTGATGCTCGAATTGCTCGAGAAGCTGCATTTGACCGA
CGATGACGGAGAGGACGGCATTGGGGGTCCCGAGCTCTTAAGCCTGCTCG
TCAAGGAAGAAAAACGCGTTTTCCTTGAGGAAAACATCTTGAATGCCGTC
AAGAAAAAGACGGTGGTCGAACGCCAACGGGAGCAGCAACAACGGGCCTC
CCGCGGACGCCCTTCCAAGGTGCAAGTCATTATCTGCGCCTGGCATCACC
CGGAAACAACCCGAAAACGCGTCGTCCTCGGCCGTGTTCCCAATCTCACC
ACCCTTTTCAATGCTGCTCGCGAAACGCTCCTCATCAAACGCCCCAAAGC
TGCTTTTAATCTCGAGACGGGGTTTTACATTTCCGACACCATGGCCGTGG
AGGAGGGTACCGTCATATGTGTCACCACCAAGATGCCTGAGGTCTCCGGG
GTGCCAATCCCAGGAGGAGGAGGAACAGTGGTCGTTCCCTTGACGGCAGC
GGAAAAATTGGTTAAGAAAGAGAAGGCTGAATTGACCAAGGCGGCGATGG
TGGAGGCGGAACAGCGGAAGCTAGAGGAGATCAAGGAGGTGTACAGGGTA
AGGGCGAGTAAAAGGGCATTAGCAGGGAAGAAGAGGCAGGAGAGGAGTGC
CGCCGATATCCAGGCACTGTCTCGGATGTTGAAGCAGAGGTTGGAGAGGG
TTAAGGGTACGGAGGCATACAGTGATATGTTGCGAACGAGGGGATCTTTA
CCCATATGGGCGAAGCGAGAAGCAATCGTGCGGTTGGTAGATGAGAATTC
TGTGGTGGTCCTGAGTGGGGCGACGGGTAGCGGGAAATCCACTCAGGTCC
CCCAATTTTTGCTCGATTATTACATAGAGGGCAATAGAGGGAGCGAAGTA
AATATCCTGGTGACGCAACCCCGGCGGATCAGTGCCATCTCGTTGTGTGA
ACGGGTAGCGACGGAGAGGTGTGAGGAGGTGGGGCAGACGGTCGGATATT
CCATTCGACTCGAGAACAGGATTTCGGGGGCTACGGCATTAACATTTGTG
ACTACGGGCTTGCTATTGAGGAGGCTGCAAGAAGATCCGGAGTTGCAGGG
GGTGTCACATGTAGTGATTGACGAAGTGCACGAGGTAGGGAGGGAGGAAG
GGAAGGGGGGAGAGGGTTGGCATAGGAGAGAATGGCATGGATTGTGGTAA
ATTTACATTTGTTTAACTTTCACAGCTACTATCTTACTAGCTACCTATCT
TTGGGGAAAGACGTAAATGATGTTTTCCGCAATATGTATCATGTATCATG
TGTGTTCGTAGCTGTTCTTTCGTGTGCCTGCATATGATTGTGTGCGTACC
AACGCACTCCCCTTTCTCCACCCTCCCTTGCCCCAAACAGCGCGACATCC
ACTCTGACTTCCTCCTCATCATCATGCGAGAGCTGTTGGACCGTCGCAAT
GACCTGAAGCTCATCCTTATGAGCGCTACGCTACAAGCTGATCTTTTCCA
AAAATATTTCGGGAACTGTCCAGCCATTCACGTCCAAGGCCGCACCTTTC
CCGTGCGGCACATTTTTCTAGAAGACATCGAGTCGAAGCTCGCTACAGTA
AAGTCCATTCCTGGCATGGGGTATTGTGCTGGTGGGGGAGGATGTGGAGG
AGGAGGTGGAGGAGGACGGGGTGGTGGTCGAGATGGAGGGAGTGGGGGGA
GAGGGAAAATGGAAGGAGGGCGAGGAGGCTTTGATGGGAGGGATCAAAGG
AGAGGCAGCAATGGTAGTTTGAATAGGAATGGGAAAGGCCATAGTAGTGG
ATCTATTGGTCCTCCTATTATATCCCCGAAAGCTGATGATCCAATTGATT
ACGTTTTGATCCTGAACTTGCTCACGTTGCTCGTGGCCATGCGCGAGGCG
GACGACAGCGAGGTTGGCGGTGCGGTCCTCGTCTTCTTTTCGGGTTTCCA
GGAGATCAATGAGCTCTGCAAGATGATTAGCACGCATCCCGTCCTCGGCA
ACTCCAATCGGGTCCAGGCATTTCCTTTGCACTCCTCCCTTCCGTCTGAT
GCCCAGCGGGCGGTCTTCCGACGGATGCCGAAGGGCGTCACCAAGGTATG
TTTATTATTGCGGGTTTCTTCTTCTTGCATACTGAGTACTTTATCTGATT
TAAATTTGAGTACACTTCGTCGCTTATTATGTTACTGACTGTCAACACGA
GTAGCAAGCGCAGTATGAGAAGAATTAACTCGTTCATTTCGTCCCATCCC
TCCCTTCTTTCTCCCTCTAGATCGTCGTCGCCACCAACATCGCCGAGACG
TCCATTACCATCGACGATATCTCCAGCGTGATTGACAGTGGCCGCGTCAA
AGAAATGCGTTACGATGCAGAGACACACATGACTTCCCTTGTCAGCGTGT
GGACATCGCAAGCTGCCGCTTCCCAACGTGCCGGCCGCGCTGGCCGCGTG
CGAGAAGGAACTTGTTTCCGATTGTATAATAAGAGCTTTATGGAAGAGCA
GATGCCAACCTATACATTGCCGGAAATGCTACGCACGCCCTTGGAGGAAT
TATCGTTGTCTATCTTGGCATTAGAATTAGGCAGCCCTGCGGAGTTTTTG
GCAAGGGCCATCGAGCCCCCCCCTCCAGAGGCGATAACGACGGCGGTGCG
AAATTTGAGAGAGATTGATGCATTGCGGAAGCACAAAGATGTAGATACTA
AAGAGGTGTCACTTCATCTGACGCCGTTAGGGTTTCATTTGGCGAATTTG
CCTTGTGATGCCCGGATCGGGAAGATGTTGATTATTGGGTCCATTTTGGG
GTGTCTGGAACCGATTTTGACGATTGCTGCGTGTTTGAGTTACAAGAGTC
CGTTTGCGAATCCATTTGGGATGCAGCAAGAGGCAGATCGGGCCCATGCT
AAATATGGATCGGCGATGTCTGACCATATTGCGGCGTTAGAAGCTTATAA
TGGATGGGCGGAATTAAGGGATCAGCCTTATCGCGTGCGAAAAGAGTATT
GCAGCGAGAATTTTTTGTCGATCGCCGCATTGGAGCAGATTGAGATGTTA
CGGAAGGAGCTGAGAAGACAGTTGGAGGACATTGGATTTGCAGCGCGAGG
GCCACGAAGGGTGTATGGTGGCGGTTCAGGAGGAGGAGGGAGGGGTGGGC
GGTTTGGAGGAGGACCGGGGGGAGGGAATGGAGGGAGGGGTAGACGGGTC
ATGTATGATGATGAAGACGAGTATTATCAGGATGTGCCGATGGAGAGAGG
CGAAGGCAGGGGGGAGAATGGGTGGAGTGATGTGACGACGTTTGATGAAA
ATGGAGGAGAGTTGGATCAGGAGGGAAGGCCTGTGGTGGACGTGAACCTG
ATTCGCTGTTGCTTGCTTGCAGCATTGTATCCTCAAGTAGGCAAGCTTGT
CCGACCGCAGAAGCCGAGTGATGGGGCGACGTTTGAGTTGAAAGATAAGA
CCAAGGTGGCTGTACATCCGGGTTCCATAAATTTTACGCGGTTAATGAAC
TTGTCGCCTACGGGGAAGGACGCGTTTTTGCTGTATCACAAGAAGGTGCA
ATCTACTAAGATCTATACCTATGATTCGACATTCGTCTCGCCATTTACCA
TTTTGTTGTTTGGTGGGGAGATCAAGATTCAATGGGAGCATGGGTCGTTG
GAAGGGGATCGCTCAATTGCTGTAACGATGGATAAGTGGCTATCTTTCCG
CATGACAGAGTCAAGTGCTGTGTTGGTCAAATATATACGGCACGAACTCA
ATGAGTTATTGCTGGAGAAGTTCTCGGACCCTGTTCAGGCGATGGAGCAA
AAGCGCAAACTTAAGGCGCGGGCAGTTGTGGAGACGATAAAGAAGCTCTT
GCTTTCAGATCGGAACTCGTTGGGTATTTGAGGTGGTTGAGGGAGGGACG
GAAGGGCGGGTAGAGGGGCGTGTGAGGAAGCGGGAGGGGGGAATGCTCTA
TGTAACCTCTTACATGTCTCACCTGATACTCAAAACAAGAGTGGTATGCA
AGAGAAGAAGCAATAAAATGCGCAAATGGTTCGCCATTGTATTCCTTTGC
CAAGGTAGAAAGCGGATGAGGAATATAAAGAGGGAGACTTAAATGAACGA
AATCAAATATACAATACTCA

Coding sequence (CDS) from alignment at chr9:409300..413719+

>NO09G01280.1 ID=NO09G01280.1|Name=NO09G01280.1|organism=Nannochloropsis oceanica|type=CDS|length=3750bp|location=Sequence derived from alignment at chr9:409300..413719+ (Nannochloropsis oceanica)
ATGGGTCGGGGGCCCAATGCGGGAGGCGGGCGTGGAAGGCGTGAGTTCGT
AGCGCCTGGCGGAGCACGGGGTGGGCGGGACGGTAGCCGAAGAGGTAGCA
GCCGTGGTGGTGGTAGCCGTGGCGGCAGAGGGACAGGAGGAGGATTAGGA
GGAGGAGGAGGAGGAGGGAAAGGGGGAGGGCGGGGGGACGGGGGAAGCAG
CCGGGGGGGCTTTGACACTGGACATGGTGGCCGGGGGGTAGAAGGGGGAG
GGGGAGGGAACGGGTCGGCGATCACGAAAAGCAACGTGGTGATTGGTGCG
GAGAACCAGCGATTGATGCTCGAATTGCTCGAGAAGCTGCATTTGACCGA
CGATGACGGAGAGGACGGCATTGGGGGTCCCGAGCTCTTAAGCCTGCTCG
TCAAGGAAGAAAAACGCGTTTTCCTTGAGGAAAACATCTTGAATGCCGTC
AAGAAAAAGACGGTGGTCGAACGCCAACGGGAGCAGCAACAACGGGCCTC
CCGCGGACGCCCTTCCAAGGTGCAAGTCATTATCTGCGCCTGGCATCACC
CGGAAACAACCCGAAAACGCGTCGTCCTCGGCCGTGTTCCCAATCTCACC
ACCCTTTTCAATGCTGCTCGCGAAACGCTCCTCATCAAACGCCCCAAAGC
TGCTTTTAATCTCGAGACGGGGTTTTACATTTCCGACACCATGGCCGTGG
AGGAGGGTACCGTCATATGTGTCACCACCAAGATGCCTGAGGTCTCCGGG
GTGCCAATCCCAGGAGGAGGAGGAACAGTGGTCGTTCCCTTGACGGCAGC
GGAAAAATTGGTTAAGAAAGAGAAGGCTGAATTGACCAAGGCGGCGATGG
TGGAGGCGGAACAGCGGAAGCTAGAGGAGATCAAGGAGGTGTACAGGGTA
AGGGCGAGTAAAAGGGCATTAGCAGGGAAGAAGAGGCAGGAGAGGAGTGC
CGCCGATATCCAGGCACTGTCTCGGATGTTGAAGCAGAGGTTGGAGAGGG
TTAAGGGTACGGAGGCATACAGTGATATGTTGCGAACGAGGGGATCTTTA
CCCATATGGGCGAAGCGAGAAGCAATCGTGCGGTTGGTAGATGAGAATTC
TGTGGTGGTCCTGAGTGGGGCGACGGGTAGCGGGAAATCCACTCAGGTCC
CCCAATTTTTGCTCGATTATTACATAGAGGGCAATAGAGGGAGCGAAGTA
AATATCCTGGTGACGCAACCCCGGCGGATCAGTGCCATCTCGTTGTGTGA
ACGGGTAGCGACGGAGAGGTGTGAGGAGGTGGGGCAGACGGTCGGATATT
CCATTCGACTCGAGAACAGGATTTCGGGGGCTACGGCATTAACATTTGTG
ACTACGGGCTTGCTATTGAGGAGGCTGCAAGAAGATCCGGAGTTGCAGGG
GGTGTCACATGTAGTGATTGACGAAGTGCACGAGCGCGACATCCACTCTG
ACTTCCTCCTCATCATCATGCGAGAGCTGTTGGACCGTCGCAATGACCTG
AAGCTCATCCTTATGAGCGCTACGCTACAAGCTGATCTTTTCCAAAAATA
TTTCGGGAACTGTCCAGCCATTCACGTCCAAGGCCGCACCTTTCCCGTGC
GGCACATTTTTCTAGAAGACATCGAGTCGAAGCTCGCTACAGTAAAGTCC
ATTCCTGGCATGGGGTATTGTGCTGGTGGGGGAGGATGTGGAGGAGGAGG
TGGAGGAGGACGGGGTGGTGGTCGAGATGGAGGGAGTGGGGGGAGAGGGA
AAATGGAAGGAGGGCGAGGAGGCTTTGATGGGAGGGATCAAAGGAGAGGC
AGCAATGGTAGTTTGAATAGGAATGGGAAAGGCCATAGTAGTGGATCTAT
TGGTCCTCCTATTATATCCCCGAAAGCTGATGATCCAATTGATTACGTTT
TGATCCTGAACTTGCTCACGTTGCTCGTGGCCATGCGCGAGGCGGACGAC
AGCGAGGTTGGCGGTGCGGTCCTCGTCTTCTTTTCGGGTTTCCAGGAGAT
CAATGAGCTCTGCAAGATGATTAGCACGCATCCCGTCCTCGGCAACTCCA
ATCGGGTCCAGGCATTTCCTTTGCACTCCTCCCTTCCGTCTGATGCCCAG
CGGGCGGTCTTCCGACGGATGCCGAAGGGCGTCACCAAGATCGTCGTCGC
CACCAACATCGCCGAGACGTCCATTACCATCGACGATATCTCCAGCGTGA
TTGACAGTGGCCGCGTCAAAGAAATGCGTTACGATGCAGAGACACACATG
ACTTCCCTTGTCAGCGTGTGGACATCGCAAGCTGCCGCTTCCCAACGTGC
CGGCCGCGCTGGCCGCGTGCGAGAAGGAACTTGTTTCCGATTGTATAATA
AGAGCTTTATGGAAGAGCAGATGCCAACCTATACATTGCCGGAAATGCTA
CGCACGCCCTTGGAGGAATTATCGTTGTCTATCTTGGCATTAGAATTAGG
CAGCCCTGCGGAGTTTTTGGCAAGGGCCATCGAGCCCCCCCCTCCAGAGG
CGATAACGACGGCGGTGCGAAATTTGAGAGAGATTGATGCATTGCGGAAG
CACAAAGATGTAGATACTAAAGAGGTGTCACTTCATCTGACGCCGTTAGG
GTTTCATTTGGCGAATTTGCCTTGTGATGCCCGGATCGGGAAGATGTTGA
TTATTGGGTCCATTTTGGGGTGTCTGGAACCGATTTTGACGATTGCTGCG
TGTTTGAGTTACAAGAGTCCGTTTGCGAATCCATTTGGGATGCAGCAAGA
GGCAGATCGGGCCCATGCTAAATATGGATCGGCGATGTCTGACCATATTG
CGGCGTTAGAAGCTTATAATGGATGGGCGGAATTAAGGGATCAGCCTTAT
CGCGTGCGAAAAGAGTATTGCAGCGAGAATTTTTTGTCGATCGCCGCATT
GGAGCAGATTGAGATGTTACGGAAGGAGCTGAGAAGACAGTTGGAGGACA
TTGGATTTGCAGCGCGAGGGCCACGAAGGGTGTATGGTGGCGGTTCAGGA
GGAGGAGGGAGGGGTGGGCGGTTTGGAGGAGGACCGGGGGGAGGGAATGG
AGGGAGGGGTAGACGGGTCATGTATGATGATGAAGACGAGTATTATCAGG
ATGTGCCGATGGAGAGAGGCGAAGGCAGGGGGGAGAATGGGTGGAGTGAT
GTGACGACGTTTGATGAAAATGGAGGAGAGTTGGATCAGGAGGGAAGGCC
TGTGGTGGACGTGAACCTGATTCGCTGTTGCTTGCTTGCAGCATTGTATC
CTCAAGTAGGCAAGCTTGTCCGACCGCAGAAGCCGAGTGATGGGGCGACG
TTTGAGTTGAAAGATAAGACCAAGGTGGCTGTACATCCGGGTTCCATAAA
TTTTACGCGGTTAATGAACTTGTCGCCTACGGGGAAGGACGCGTTTTTGC
TGTATCACAAGAAGGTGCAATCTACTAAGATCTATACCTATGATTCGACA
TTCGTCTCGCCATTTACCATTTTGTTGTTTGGTGGGGAGATCAAGATTCA
ATGGGAGCATGGGTCGTTGGAAGGGGATCGCTCAATTGCTGTAACGATGG
ATAAGTGGCTATCTTTCCGCATGACAGAGTCAAGTGCTGTGTTGGTCAAA
TATATACGGCACGAACTCAATGAGTTATTGCTGGAGAAGTTCTCGGACCC
TGTTCAGGCGATGGAGCAAAAGCGCAAACTTAAGGCGCGGGCAGTTGTGG
AGACGATAAAGAAGCTCTTGCTTTCAGATCGGAACTCGTTGGGTATTTGA

Synonyms

Publications