NO09G01200.1, NO09G01200.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G01200.1
Unique NameNO09G01200.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4797
Alignment locationchr9:388661..393567 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:388661..393567 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO09G01200.1 vs.
Match: EWM27664.1 (hypothetical protein Naga_100125g7 [Nannochloropsis gaditana])

HSP 1 Score: 1283.9 bits (3321), Expect = 0.000e+0
Identity = 740/1454 (50.89%), Postives = 960/1454 (66.02%), Query Frame = 0
Query:    1 MWQRRPSVSGKYAEEAGHYSFPPPIDHAPV---VTVVDTTTSSTNRRIMPR----SPDRSVSVVGILLAFPCLVFAV--VFYSHHKNTSNSNSIQPQ---------RALDTLIAFPNLFFWNLKGTIKVGVEEEAAIVGISPGRVGEWFDALNPLTDALDMTADVEGFNAAWEGFWLRNGRTCLADSTKRLKEAVES-ACDVVLLLPGHIYHLKKMINVWRPITLIGNPAERPIINAAKAERAFWVHSKASMDIRHIMFYEGEGDVIRNEIRTRFGGVVYLSSGANLFAFDCLFTIQPTREAIFNDRPEFIFGGDLLMVGGVMNILACSFFAIVPGFVNSISTEIGGSVLILGGKATFTLVNFMTTQIFAFNAGSGMHLALLGGAMSMQACTHTANLVFAVQGIVGRNIFVGGGIGVFTGCVITDSICFLAFYGAGFSIFIGAGGGIFAGCEIMLNSAIGHKAGVGIAVAVGAGTGLFYGTVFSKNLGITLFNTLGVFIFVGTGRLALVGCPFAHQNAIAAWQLLGGAIYLGTGQAVVIGCVFTRSLGLDSFTGLGGDIFVGAGQLVLVHSVFTSNTGITAFLGQGSDLYLAAGSAYIKHVNASINAGIHLVSEDLAGFYVAGRECEVKTLESDAITKFKERGYALCYKGLDGNEKEEIE---------GEGVALVVVQNLQGRQRLGGWRGWTLPDTSPALLYLGGNISSCQICGLDNVEVQGPATGACYDAEATEPAVCPADQ--SPRKTAALAGEPPVVIAPVANTIIDSSSSSNSTRDVKNKLFGLNARVRRLIAGRSENDRVRQATEATEAAAAAAADDDHEPDAFLPDTYVITADLVLNCSSLFSTTNESVVVATCGCGTTARELQDLLEESWLKDLGAEDDTTVVITPFKSSDSLLETLGILSINGRSNSS-----------GSSSNPSEPSTACTKQEIYATYLHTTDKVTFEKLKHSL-LATDSSSSTSGRSNIITLLSSRLSLLLAALYPQICHVNLTLQDSLFVPPPVKNPTSSIGTAASSDSSGNNRPSGISGGITLPRVWVNITTPVISVGNTYQVAISDFDDGDRVGLQLVASFSKDKKDKKATPSLFFQSTPRPLYTFRPFDALAGNQTWGWQTSALTFRGMGSGPFFLKAFDILEPKRFVLSQAFELEGVTATAGTVRGLNAGTRNAGTSSATLKTRAEHIVRRLSGQFSGSE-------EEEEQQDIPKLE-------------DNDDSNLNLISIMSTLLVSPNSEEAFSITRNLWKALLALPSSQKALKNPALARQLLERVPALQTAPAILALDANGEAGWKDSVQIQAAMGKAIADFMDMSLSALQQQRRQQQKQKAGALFRQNDEGVDTANQWPTKIFESLTPEEEALAKRIAQERDIASMNVLMDSQAARRFGGMTMARLQDAGVGEDIKEMLGSTDIFRDLIDDPELWKAL 1393
            MW+RR S S   ++        P  D  P    +T    + +S NR +  R    + +R ++++  L+      F V  + Y    N +  +  Q Q         R L +L  +PNLFFWN+K   +    + A    ++P RV   FD L+PL+DA+ +TADVE F+ AWEGFWLRNG+TCLA  T+RL EAV S ACDVV+L+ GH+Y+L +M++V++P T+IGNPA+RP+INAA+AERAF VHS A+ D+RHI+FYEG+GD+IRNEIRTRFGG +Y+S G  LFAFDCLFTIQP RE+  N  PEFIFGGD+LM GGVM ++ CSFFA+VPGF+NS+STE+GG+VLIL G AT TLVNFMTTQIFA+NAG GMHL +LGG+++M ACTHTANLVFA QG+VGRNIF+GGG+GVFT   +TD++ FL+F+GAGFSI IG+G GIF G  I LN+A    AGVG+A  VGAG  LFYGT F+KNLGI ++++ GVFIF G GR+ALVGC F HQNAIA+WQLLGGA+YLGTGQAV +GC + RSLGLD F GLGGD+++GAGQ+VLV  VFTSNTGIT FLGQG++L++AAGSA++K+VN S NAGIH + E    F V GR+CEV T ES     ++E+GY LC+KG DG+E+ + E         G  V  +VV+ L   Q+LGGW G T   T P ++Y+G NI+SC +CGL+NVEV+GP    C     TE A CPA+   S  +T+AL  EP    A VA      S SS +      K FGL +R+R+LI G  E+D +R +T   E  ++      ++PDA LPD+YV+ ADL+L C +      + V     GCG     LQ+++E SWLK  G ED+  V +  FKSSDSL E LGI S++G +  S            SS N SEPS  C   E +  Y HT+DK T+E LK SL  AT+S++  SG     + LS+ L+LLL++  P IC VN TLQDS  VP P+    SS  T +SS ++ +NR      G+TLPRVW+NIT+PVI+   TY + IS+FDD D VGLQL+A  SKDKK      SLFF STPR L+TF+PFD+   NQTW W+ S L F+GM SGP+FLKAFD+LEPKRFVLSQAF++E   A      G        G +S+    +AE I+ RL  Q S ++       E +  ++ P LE             D D S+ +L+S+M+TLL  P   E  S+   LWKALLA P+SQ AL +  LAR+LLER P LQTAP+++ALDA+  AGW+D  Q+QAA+GKAIADF+D+S+S L+QQR +    K        D   D  + WP +I   LTPEEEALA R+ ++ D+ +M  LMD+QAA RFGGMTMARL+   +G++ K  L S +IFRDLIDDPE+W+ L
Sbjct:    1 MWRRRASTSDTVSKAGS-----PSDDGGPKHDDITRQAMSPASLNRYLCQRGLSGTQNRKMALLKGLMPMVASTFLVFILLYCRRANPATLSPAQGQQQKASPSIFRTLQSLSMYPNLFFWNMKQAAEEVALQGALTFNVAPARVDSLFDNLDPLSDAMGVTADVEIFDDAWEGFWLRNGKTCLAHDTRRLMEAVNSTACDVVVLVAGHVYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLIRNEIRTRFGGAIYMSIGTRLFAFDCLFTIQPVRESFINSAPEFIFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACTHTANLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGSAFVKNVNFSANAGIHYLREGTFSFVVGGRKCEVTTEESTGSFNYREKGYGLCFKGFDGSERSDPEGSVALGIDDGNVVPTLVVEKLHAHQQLGGWHGLTPLYTPPQVMYVGSNITSCALCGLENVEVRGPGMEGC--PAGTEEA-CPAESPVSSGRTSALM-EPATAAADVA------SGSSATPFKKARKFFGLGSRLRKLITGEKEDDPIR-STGTDEIKSS----HHYDPDALLPDSYVVIADLMLECQT------DGV---EAGCGILLETLQEIVESSWLK--GLEDEARVHVAKFKSSDSLREMLGIPSMDGVAAPSSTDTNIPQSKRSSSGNLSEPS--CNGHEAFVAYAHTSDKSTYESLKASLSSATESATIGSGSG---STLSADLALLLSSQQPTICTVNFTLQDSFMVPAPLAK-FSSTSTGSSSSATASNRAKTAFQGLTLPRVWINITSPVITPRKTYDIVISEFDDKDIVGLQLMAKPSKDKK-----KSLFFSSTPRLLHTFQPFDSDKHNQTWAWRVSPLVFQGMASGPYFLKAFDVLEPKRFVLSQAFQVERSAAEPRQGAG-------KGAASSLFPMKAERILHRLDPQNSPTDAHLREDPEPKTDRETPVLESDSRQNHRPRQLLDEDSSDRDLLSMMATLLALP---EDTSLMDELWKALLAFPASQTALADEGLARKLLERAPVLQTAPSVVALDADDGAGWRDPGQVQAALGKAIADFVDLSVSVLRQQRGRGDGPKGMGKADVFDGREDPNDHWPARILGGLTPEEEALAARVGRDGDLEAMGELMDTQAAHRFGGMTMARLKAMELGDEFKGGLAS-EIFRDLIDDPEIWQEL 1401          
The following BLAST results are available for this feature:
BLAST of NO09G01200.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27664.10.000e+050.89hypothetical protein Naga_100125g7 [Nannochloropsi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G01200NO09G01200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G01200.1NO09G01200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G01200.1.cds1NO09G01200.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G01200.1.cds2NO09G01200.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G01200.1 ID=NO09G01200.1|Name=NO09G01200.1|organism=Nannochloropsis oceanica|type=mRNA|length=4797bp
CAATCGCTAACTTAGTAATTTTTCCGGTTTGGCGAACGCAACGCGCCCTC
TTTCGTCTTGCACGATGAGTGCACGATGATAGTCGCAGCACAAGACTCAA
AACACACAGCACACTTTATCACGCATCCACAGCCACATCCTCTCAAACCT
GACAACTCTACGTGCGGGCTTGATTTCCGCGCATTGGTTTAGACCGTTAC
GTCACCCCCCTCGCGTATCGTTTGTGCGCATCGGTATACCCAGCATTTGC
CTCCACACCTTGCCGTCAAAAATTCACCGTACCCGCGCATTCCTCAGATT
GCTACCAATGTGGCAACGGCGACCGTCCGTCTCGGGCAAATATGCGGAGG
AGGCGGGCCACTATTCTTTTCCCCCACCCATTGACCATGCTCCAGTCGTC
ACGGTCGTTGATACCACCACGAGCAGCACGAACCGCCGAATCATGCCTAG
ATCTCCAGATCGTTCCGTGTCGGTAGTGGGCATCCTGCTTGCCTTCCCGT
GCCTTGTATTCGCCGTTGTCTTTTACAGTCATCACAAAAATACCAGCAAC
AGCAATAGCATCCAGCCGCAACGTGCCCTCGACACGCTGATAGCTTTTCC
CAATCTCTTCTTTTGGAATTTAAAGGGCACCATCAAAGTCGGGGTTGAGG
AGGAAGCGGCCATAGTGGGCATTTCTCCTGGACGGGTGGGCGAGTGGTTT
GATGCCTTGAACCCACTGACGGATGCCTTGGACATGACGGCAGATGTGGA
AGGATTCAATGCCGCGTGGGAAGGCTTTTGGCTCCGAAATGGGCGGACGT
GCCTGGCAGACAGCACCAAACGGCTTAAGGAAGCTGTAGAGTCAGCCTGC
GACGTTGTGTTGCTCTTACCGGGACATATCTATCATTTAAAAAAGATGAT
AAACGTGTGGAGACCAATCACGCTGATAGGCAATCCGGCGGAGAGGCCGA
TTATCAACGCCGCAAAAGCCGAGCGGGCATTTTGGGTGCATTCGAAGGCG
AGCATGGACATACGACACATAATGTTTTATGAAGGCGAAGGGGACGTGAT
TCGAAACGAGATCCGAACTCGGTTTGGTGGGGTTGTGTATTTGTCAAGTG
GTGCGAACCTTTTCGCCTTTGATTGTTTATTTACGATCCAGCCAACGCGT
GAGGCGATCTTCAACGACAGACCAGAGTTTATTTTTGGTGGGGACCTCCT
TATGGTAGGCGGCGTCATGAACATCCTTGCGTGCTCATTTTTTGCGATCG
TGCCCGGTTTTGTTAACTCCATCTCGACGGAGATAGGCGGCTCGGTCTTG
ATCCTGGGGGGGAAGGCGACATTTACTTTGGTAAACTTCATGACAACGCA
AATCTTTGCTTTCAATGCAGGAAGTGGGATGCACCTCGCCCTCTTAGGTG
GGGCGATGTCGATGCAAGCCTGCACGCATACGGCCAACTTGGTCTTTGCT
GTACAAGGGATTGTAGGGCGTAATATTTTTGTAGGGGGTGGAATCGGCGT
GTTTACGGGGTGTGTCATTACAGATTCAATTTGTTTTTTGGCATTCTACG
GCGCAGGTTTTAGCATTTTCATTGGAGCAGGAGGTGGGATTTTTGCTGGC
TGCGAGATCATGTTAAACAGTGCCATTGGCCATAAGGCCGGTGTTGGGAT
AGCTGTGGCTGTGGGAGCAGGCACAGGCTTGTTCTACGGCACGGTATTTT
CGAAAAATTTGGGGATTACACTGTTCAACACACTTGGCGTGTTCATATTT
GTTGGCACGGGTCGCCTGGCTCTTGTGGGGTGTCCCTTCGCGCACCAAAA
TGCCATAGCGGCCTGGCAGCTTTTGGGAGGAGCCATCTACCTCGGAACAG
GTCAAGCCGTGGTGATTGGTTGTGTTTTCACAAGGTCGTTGGGCCTTGAT
TCGTTCACAGGGCTGGGCGGAGATATTTTTGTTGGTGCTGGACAGCTGGT
ATTGGTCCACTCTGTGTTCACGAGCAACACGGGCATAACTGCCTTCCTCG
GACAGGGCTCGGACTTGTACTTGGCAGCGGGAAGTGCGTATATAAAGCAT
GTGAATGCCTCGATAAATGCCGGGATACACCTTGTGAGTGAGGACCTGGC
GGGGTTCTATGTCGCGGGGAGGGAGTGCGAAGTCAAAACGTTGGAGTCAG
ATGCGATCACAAAATTCAAGGAGAGAGGATATGCACTGTGTTACAAGGGG
CTTGACGGTAACGAGAAGGAGGAGATCGAGGGGGAGGGAGTTGCCCTGGT
GGTGGTCCAGAACTTGCAGGGCCGTCAGCGTTTGGGGGGATGGCGGGGAT
GGACTCTGCCGGATACCAGCCCGGCGCTCCTATATTTGGGTGGGAACATA
TCGTCGTGCCAGATATGTGGTTTGGACAACGTGGAAGTGCAAGGGCCTGC
GACGGGGGCATGTTATGACGCAGAGGCGACAGAACCGGCGGTCTGTCCAG
CAGATCAATCTCCTCGTAAGACAGCAGCATTAGCGGGCGAGCCACCTGTA
GTAATAGCGCCAGTTGCCAACACCATTATCGACAGCAGCAGCAGCAGCAA
CTCCACACGTGATGTCAAGAACAAACTCTTTGGATTGAACGCCAGGGTCC
GTCGACTCATTGCAGGCAGGAGCGAGAACGATCGCGTAAGACAAGCCACA
GAGGCCACAGAAGCAGCAGCCGCAGCGGCAGCAGATGATGACCACGAGCC
AGATGCCTTTCTACCTGATACATACGTGATTACTGCTGACTTGGTTCTCA
ACTGCTCTTCTTTGTTCTCCACCACGAACGAAAGTGTTGTTGTCGCCACT
TGTGGATGTGGTACCACGGCAAGGGAGCTGCAAGACCTGTTGGAGGAGAG
TTGGCTTAAGGATCTGGGAGCAGAGGACGATACTACCGTGGTCATAACGC
CTTTCAAGTCCTCTGACAGTTTGCTTGAGACCTTGGGAATTCTTTCTATC
AATGGAAGAAGTAACAGTAGCGGTAGTAGCAGTAATCCCTCCGAACCCTC
CACGGCGTGTACCAAACAAGAGATCTATGCGACTTACCTGCATACGACTG
ACAAGGTCACGTTCGAGAAGCTCAAACACTCCCTCTTGGCCACCGACAGC
AGCAGCAGCACTAGCGGCAGAAGTAATATCATCACTTTGCTCTCAAGCCG
CCTATCTCTTCTCTTGGCGGCCCTCTACCCGCAGATTTGCCACGTTAATC
TTACCCTACAAGACAGCCTCTTTGTGCCCCCCCCCGTAAAAAATCCTACC
TCTTCAATCGGTACGGCCGCAAGCAGTGACAGCAGCGGCAACAACCGACC
ATCAGGCATCTCGGGCGGCATCACTTTACCGCGCGTGTGGGTGAATATCA
CCACGCCTGTAATTTCGGTAGGGAACACGTACCAAGTGGCCATCTCTGAC
TTTGATGACGGGGATCGTGTGGGTTTACAGCTGGTGGCTTCTTTTTCGAA
AGATAAGAAGGACAAGAAGGCCACCCCATCTCTCTTCTTTCAATCTACCC
CTCGGCCTCTGTACACATTTCGTCCATTCGATGCGCTGGCAGGAAACCAG
ACATGGGGATGGCAGACTTCTGCTCTGACGTTTAGGGGTATGGGTAGCGG
GCCATTTTTCCTGAAAGCATTTGATATTTTGGAGCCGAAGCGGTTTGTGC
TGAGTCAAGCCTTTGAATTGGAAGGGGTGACTGCCACAGCTGGTACTGTG
AGAGGGCTCAATGCTGGGACAAGGAATGCAGGAACAAGCTCTGCGACATT
AAAGACGAGGGCCGAGCACATTGTCCGGCGGCTTTCCGGCCAATTTTCCG
GAAGCGAGGAAGAGGAAGAGCAGCAAGATATCCCCAAGCTCGAGGACAAC
GACGACAGCAATCTTAACCTTATCTCCATAATGTCCACCCTGCTTGTCTC
TCCCAATTCCGAGGAGGCATTTTCGATAACGAGGAACCTCTGGAAGGCTC
TCCTTGCCCTCCCCTCCTCTCAAAAGGCACTCAAAAACCCCGCCCTTGCT
CGGCAACTCTTAGAGCGAGTGCCAGCCCTTCAAACCGCGCCTGCTATTCT
TGCACTGGATGCGAATGGCGAGGCCGGCTGGAAAGACTCGGTCCAGATTC
AAGCTGCTATGGGAAAAGCGATAGCTGATTTCATGGATATGTCCTTGTCT
GCCCTGCAACAGCAGCGACGGCAGCAGCAAAAGCAGAAAGCGGGTGCCTT
GTTTCGTCAAAATGACGAGGGGGTAGATACAGCGAACCAATGGCCGACTA
AAATCTTTGAAAGCTTAACGCCGGAAGAGGAGGCATTGGCGAAGCGTATA
GCACAGGAACGGGATATAGCATCGATGAATGTGTTGATGGATTCGCAGGC
CGCGAGACGATTTGGGGGAATGACAATGGCGAGGCTCCAGGATGCGGGGG
TAGGGGAGGATATCAAAGAGATGCTTGGGTCGACCGACATATTTAGGGAC
TTAATTGATGACCCAGAACTGTGGAAGGCACTATGAGTGGGAGAGGCGAA
CGTTGTACTCTAGGTAGGTTTTCTTCTGGTACATGAAGGAAAAGGTGAGG
TAGGGAAGAGGAGTGAGGGTAGAATATGAATCCCGACAGAGCGTGTTTTA
AAGGTGTTTATAAATGAGCATATCATATCTGCATGTATTTAATGCGAATA
TACAAAGAAATGTTAGCGCGATGCTTCACTATGAGAGAGTCACAGGAGAG
AGAATGGCCCTCCTCCCTGTTGTCGGAGAGAACAAAAGCCATGCAGGGGG
ATCAGAGGTAAATGTAGTCTGACGCCTCTGATCGGAAATTTATGACA
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protein sequence of NO09G01200.1

>NO09G01200.1-protein ID=NO09G01200.1-protein|Name=NO09G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1393bp
MWQRRPSVSGKYAEEAGHYSFPPPIDHAPVVTVVDTTTSSTNRRIMPRSP
DRSVSVVGILLAFPCLVFAVVFYSHHKNTSNSNSIQPQRALDTLIAFPNL
FFWNLKGTIKVGVEEEAAIVGISPGRVGEWFDALNPLTDALDMTADVEGF
NAAWEGFWLRNGRTCLADSTKRLKEAVESACDVVLLLPGHIYHLKKMINV
WRPITLIGNPAERPIINAAKAERAFWVHSKASMDIRHIMFYEGEGDVIRN
EIRTRFGGVVYLSSGANLFAFDCLFTIQPTREAIFNDRPEFIFGGDLLMV
GGVMNILACSFFAIVPGFVNSISTEIGGSVLILGGKATFTLVNFMTTQIF
AFNAGSGMHLALLGGAMSMQACTHTANLVFAVQGIVGRNIFVGGGIGVFT
GCVITDSICFLAFYGAGFSIFIGAGGGIFAGCEIMLNSAIGHKAGVGIAV
AVGAGTGLFYGTVFSKNLGITLFNTLGVFIFVGTGRLALVGCPFAHQNAI
AAWQLLGGAIYLGTGQAVVIGCVFTRSLGLDSFTGLGGDIFVGAGQLVLV
HSVFTSNTGITAFLGQGSDLYLAAGSAYIKHVNASINAGIHLVSEDLAGF
YVAGRECEVKTLESDAITKFKERGYALCYKGLDGNEKEEIEGEGVALVVV
QNLQGRQRLGGWRGWTLPDTSPALLYLGGNISSCQICGLDNVEVQGPATG
ACYDAEATEPAVCPADQSPRKTAALAGEPPVVIAPVANTIIDSSSSSNST
RDVKNKLFGLNARVRRLIAGRSENDRVRQATEATEAAAAAAADDDHEPDA
FLPDTYVITADLVLNCSSLFSTTNESVVVATCGCGTTARELQDLLEESWL
KDLGAEDDTTVVITPFKSSDSLLETLGILSINGRSNSSGSSSNPSEPSTA
CTKQEIYATYLHTTDKVTFEKLKHSLLATDSSSSTSGRSNIITLLSSRLS
LLLAALYPQICHVNLTLQDSLFVPPPVKNPTSSIGTAASSDSSGNNRPSG
ISGGITLPRVWVNITTPVISVGNTYQVAISDFDDGDRVGLQLVASFSKDK
KDKKATPSLFFQSTPRPLYTFRPFDALAGNQTWGWQTSALTFRGMGSGPF
FLKAFDILEPKRFVLSQAFELEGVTATAGTVRGLNAGTRNAGTSSATLKT
RAEHIVRRLSGQFSGSEEEEEQQDIPKLEDNDDSNLNLISIMSTLLVSPN
SEEAFSITRNLWKALLALPSSQKALKNPALARQLLERVPALQTAPAILAL
DANGEAGWKDSVQIQAAMGKAIADFMDMSLSALQQQRRQQQKQKAGALFR
QNDEGVDTANQWPTKIFESLTPEEEALAKRIAQERDIASMNVLMDSQAAR
RFGGMTMARLQDAGVGEDIKEMLGSTDIFRDLIDDPELWKAL*
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mRNA from alignment at chr9:388661..393567-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G01200.1 ID=NO09G01200.1|Name=NO09G01200.1|organism=Nannochloropsis oceanica|type=mRNA|length=4907bp|location=Sequence derived from alignment at chr9:388661..393567- (Nannochloropsis oceanica)
CAATCGCTAACTTAGTAATTTTTCCGGTTTGGCGAACGCAACGCGCCCTC TTTCGTCTTGCACGATGAGTGCACGATGATAGTCGCAGCACAAGACTCAA AACACACAGCACACTTTATCACGCATCCACAGCCACATCCTCTCAAACCT GACAACTCTACGTGCGGGCTTGATTTCCGCGCATTGGTTTAGACCGTTAC GTCACCCCCCTCGCGTATCGTTTGTGCGCATCGGTATACCCAGCATTTGC CTCCACACCTTGCCGTCAAAAATTCACCGTACCCGCGCATTCCTCAGATT GCTACCAATGTGGCAACGGCGACCGTCCGTCTCGGGCAAATATGCGGAGG AGGCGGGCCACTATTCTTTTCCCCCACCCATTGACCATGCTCCAGTCGTC ACGGTCGTTGATACCACCACGAGCAGCACGAACCGCCGAATCATGCCTAG ATCTCCAGATCGTTCCGTGTCGGTAGTGGGCATCCTGCTTGCCTTCCCGT GCCTTGTATTCGCCGTTGTCTTTTACAGTCATCACAAAAATACCAGCAAC AGCAATAGCATCCAGCCGCAACGTGCCCTCGACACGCTGATAGCTTTTCC CAATCTCTTCTTTTGGAATTTAAAGGGCACCATCAAAGTCGGGGTTGAGG AGGAAGCGGCCATAGTGGGCATTTCTCCTGGACGGGTGGGCGAGTGGTTT GATGCCTTGAACCCACTGACGGATGCCTTGGACATGACGGCAGATGTGGA AGGATTCAATGCCGCGTGGGAAGGCTTTTGGCTCCGAAATGGGCGGACGT GCCTGGCAGACAGCACCAAACGGCTTAAGGAAGCTGTAGAGTCAGCCTGC GACGTTGTGTTGCTCTTACCGGGACATATCTATCATTTAAAAAAGATGAT AAACGTGTGGAGACCAATCACGCTGATAGGCAATCCGGCGGAGAGGCCGA TTATCAACGCCGCAAAAGCCGAGCGGGCATTTTGGGTGCATTCGAAGGCG AGCATGGACATACGACACATAATGTTTTATGAAGGCGAAGGGGACGTGAT TCGAAACGAGATCCGAACTCGGTTTGGTGGGGTTGTGTATTTGTCAAGTG GTGCGAACCTTTTCGCCTTTGATTGTTTATTTACGATCCAGCCAACGCGT GAGGCGATCTTCAACGACAGACCAGAGTTTATTTTTGGTGGGGACCTCCT TATGGTAGGCGGCGTCATGAACATCCTTGCGTGCTCATTTTTTGCGATCG TGCCCGGTTTTGTTAACTCCATCTCGACGGAGATAGGCGGCTCGGTCTTG ATCCTGGGGGGGAAGGCGACATTTACTTTGGTAAGGAAAGAGAGAAGAGG AATGGAAAGAAAGGAAGGAGAAGAAATAGAAGAAGCACTAGTTACTGATC CACCCCCTTACCGCTAAACTCTCTCCCTTTTACTTCCCAGGTAAACTTCA TGACAACGCAAATCTTTGCTTTCAATGCAGGAAGTGGGATGCACCTCGCC CTCTTAGGTGGGGCGATGTCGATGCAAGCCTGCACGCATACGGCCAACTT GGTCTTTGCTGTACAAGGGATTGTAGGGCGTAATATTTTTGTAGGGGGTG GAATCGGCGTGTTTACGGGGTGTGTCATTACAGATTCAATTTGTTTTTTG GCATTCTACGGCGCAGGTTTTAGCATTTTCATTGGAGCAGGAGGTGGGAT TTTTGCTGGCTGCGAGATCATGTTAAACAGTGCCATTGGCCATAAGGCCG GTGTTGGGATAGCTGTGGCTGTGGGAGCAGGCACAGGCTTGTTCTACGGC ACGGTATTTTCGAAAAATTTGGGGATTACACTGTTCAACACACTTGGCGT GTTCATATTTGTTGGCACGGGTCGCCTGGCTCTTGTGGGGTGTCCCTTCG CGCACCAAAATGCCATAGCGGCCTGGCAGCTTTTGGGAGGAGCCATCTAC CTCGGAACAGGTCAAGCCGTGGTGATTGGTTGTGTTTTCACAAGGTCGTT GGGCCTTGATTCGTTCACAGGGCTGGGCGGAGATATTTTTGTTGGTGCTG GACAGCTGGTATTGGTCCACTCTGTGTTCACGAGCAACACGGGCATAACT GCCTTCCTCGGACAGGGCTCGGACTTGTACTTGGCAGCGGGAAGTGCGTA TATAAAGCATGTGAATGCCTCGATAAATGCCGGGATACACCTTGTGAGTG AGGACCTGGCGGGGTTCTATGTCGCGGGGAGGGAGTGCGAAGTCAAAACG TTGGAGTCAGATGCGATCACAAAATTCAAGGAGAGAGGATATGCACTGTG TTACAAGGGGCTTGACGGTAACGAGAAGGAGGAGATCGAGGGGGAGGGAG TTGCCCTGGTGGTGGTCCAGAACTTGCAGGGCCGTCAGCGTTTGGGGGGA TGGCGGGGATGGACTCTGCCGGATACCAGCCCGGCGCTCCTATATTTGGG TGGGAACATATCGTCGTGCCAGATATGTGGTTTGGACAACGTGGAAGTGC AAGGGCCTGCGACGGGGGCATGTTATGACGCAGAGGCGACAGAACCGGCG GTCTGTCCAGCAGATCAATCTCCTCGTAAGACAGCAGCATTAGCGGGCGA GCCACCTGTAGTAATAGCGCCAGTTGCCAACACCATTATCGACAGCAGCA GCAGCAGCAACTCCACACGTGATGTCAAGAACAAACTCTTTGGATTGAAC GCCAGGGTCCGTCGACTCATTGCAGGCAGGAGCGAGAACGATCGCGTAAG ACAAGCCACAGAGGCCACAGAAGCAGCAGCCGCAGCGGCAGCAGATGATG ACCACGAGCCAGATGCCTTTCTACCTGATACATACGTGATTACTGCTGAC TTGGTTCTCAACTGCTCTTCTTTGTTCTCCACCACGAACGAAAGTGTTGT TGTCGCCACTTGTGGATGTGGTACCACGGCAAGGGAGCTGCAAGACCTGT TGGAGGAGAGTTGGCTTAAGGATCTGGGAGCAGAGGACGATACTACCGTG GTCATAACGCCTTTCAAGTCCTCTGACAGTTTGCTTGAGACCTTGGGAAT TCTTTCTATCAATGGAAGAAGTAACAGTAGCGGTAGTAGCAGTAATCCCT CCGAACCCTCCACGGCGTGTACCAAACAAGAGATCTATGCGACTTACCTG CATACGACTGACAAGGTCACGTTCGAGAAGCTCAAACACTCCCTCTTGGC CACCGACAGCAGCAGCAGCACTAGCGGCAGAAGTAATATCATCACTTTGC TCTCAAGCCGCCTATCTCTTCTCTTGGCGGCCCTCTACCCGCAGATTTGC CACGTTAATCTTACCCTACAAGACAGCCTCTTTGTGCCCCCCCCCGTAAA AAATCCTACCTCTTCAATCGGTACGGCCGCAAGCAGTGACAGCAGCGGCA ACAACCGACCATCAGGCATCTCGGGCGGCATCACTTTACCGCGCGTGTGG GTGAATATCACCACGCCTGTAATTTCGGTAGGGAACACGTACCAAGTGGC CATCTCTGACTTTGATGACGGGGATCGTGTGGGTTTACAGCTGGTGGCTT CTTTTTCGAAAGATAAGAAGGACAAGAAGGCCACCCCATCTCTCTTCTTT CAATCTACCCCTCGGCCTCTGTACACATTTCGTCCATTCGATGCGCTGGC AGGAAACCAGACATGGGGATGGCAGACTTCTGCTCTGACGTTTAGGGGTA TGGGTAGCGGGCCATTTTTCCTGAAAGCATTTGATATTTTGGAGCCGAAG CGGTTTGTGCTGAGTCAAGCCTTTGAATTGGAAGGGGTGACTGCCACAGC TGGTACTGTGAGAGGGCTCAATGCTGGGACAAGGAATGCAGGAACAAGCT CTGCGACATTAAAGACGAGGGCCGAGCACATTGTCCGGCGGCTTTCCGGC CAATTTTCCGGAAGCGAGGAAGAGGAAGAGCAGCAAGATATCCCCAAGCT CGAGGACAACGACGACAGCAATCTTAACCTTATCTCCATAATGTCCACCC TGCTTGTCTCTCCCAATTCCGAGGAGGCATTTTCGATAACGAGGAACCTC TGGAAGGCTCTCCTTGCCCTCCCCTCCTCTCAAAAGGCACTCAAAAACCC CGCCCTTGCTCGGCAACTCTTAGAGCGAGTGCCAGCCCTTCAAACCGCGC CTGCTATTCTTGCACTGGATGCGAATGGCGAGGCCGGCTGGAAAGACTCG GTCCAGATTCAAGCTGCTATGGGAAAAGCGATAGCTGATTTCATGGATAT GTCCTTGTCTGCCCTGCAACAGCAGCGACGGCAGCAGCAAAAGCAGAAAG CGGGTGCCTTGTTTCGTCAAAATGACGAGGGGGTAGATACAGCGAACCAA TGGCCGACTAAAATCTTTGAAAGCTTAACGCCGGAAGAGGAGGCATTGGC GAAGCGTATAGCACAGGAACGGGATATAGCATCGATGAATGTGTTGATGG ATTCGCAGGCCGCGAGACGATTTGGGGGAATGACAATGGCGAGGCTCCAG GATGCGGGGGTAGGGGAGGATATCAAAGAGATGCTTGGGTCGACCGACAT ATTTAGGGACTTAATTGATGACCCAGAACTGTGGAAGGCACTATGAGTGG GAGAGGCGAACGTTGTACTCTAGGTAGGTTTTCTTCTGGTACATGAAGGA AAAGGTGAGGTAGGGAAGAGGAGTGAGGGTAGAATATGAATCCCGACAGA GCGTGTTTTAAAGGTGTTTATAAATGAGCATATCATATCTGCATGTATTT AATGCGAATATACAAAGAAATGTTAGCGCGATGCTTCACTATGAGAGAGT CACAGGAGAGAGAATGGCCCTCCTCCCTGTTGTCGGAGAGAACAAAAGCC ATGCAGGGGGATCAGAGGTAAATGTAGTCTGACGCCTCTGATCGGAAATT TATGACA
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Coding sequence (CDS) from alignment at chr9:388661..393567-

>NO09G01200.1 ID=NO09G01200.1|Name=NO09G01200.1|organism=Nannochloropsis oceanica|type=CDS|length=4179bp|location=Sequence derived from alignment at chr9:388661..393567- (Nannochloropsis oceanica)
ATGTGGCAACGGCGACCGTCCGTCTCGGGCAAATATGCGGAGGAGGCGGG
CCACTATTCTTTTCCCCCACCCATTGACCATGCTCCAGTCGTCACGGTCG
TTGATACCACCACGAGCAGCACGAACCGCCGAATCATGCCTAGATCTCCA
GATCGTTCCGTGTCGGTAGTGGGCATCCTGCTTGCCTTCCCGTGCCTTGT
ATTCGCCGTTGTCTTTTACAGTCATCACAAAAATACCAGCAACAGCAATA
GCATCCAGCCGCAACGTGCCCTCGACACGCTGATAGCTTTTCCCAATCTC
TTCTTTTGGAATTTAAAGGGCACCATCAAAGTCGGGGTTGAGGAGGAAGC
GGCCATAGTGGGCATTTCTCCTGGACGGGTGGGCGAGTGGTTTGATGCCT
TGAACCCACTGACGGATGCCTTGGACATGACGGCAGATGTGGAAGGATTC
AATGCCGCGTGGGAAGGCTTTTGGCTCCGAAATGGGCGGACGTGCCTGGC
AGACAGCACCAAACGGCTTAAGGAAGCTGTAGAGTCAGCCTGCGACGTTG
TGTTGCTCTTACCGGGACATATCTATCATTTAAAAAAGATGATAAACGTG
TGGAGACCAATCACGCTGATAGGCAATCCGGCGGAGAGGCCGATTATCAA
CGCCGCAAAAGCCGAGCGGGCATTTTGGGTGCATTCGAAGGCGAGCATGG
ACATACGACACATAATGTTTTATGAAGGCGAAGGGGACGTGATTCGAAAC
GAGATCCGAACTCGGTTTGGTGGGGTTGTGTATTTGTCAAGTGGTGCGAA
CCTTTTCGCCTTTGATTGTTTATTTACGATCCAGCCAACGCGTGAGGCGA
TCTTCAACGACAGACCAGAGTTTATTTTTGGTGGGGACCTCCTTATGGTA
GGCGGCGTCATGAACATCCTTGCGTGCTCATTTTTTGCGATCGTGCCCGG
TTTTGTTAACTCCATCTCGACGGAGATAGGCGGCTCGGTCTTGATCCTGG
GGGGGAAGGCGACATTTACTTTGGTAAACTTCATGACAACGCAAATCTTT
GCTTTCAATGCAGGAAGTGGGATGCACCTCGCCCTCTTAGGTGGGGCGAT
GTCGATGCAAGCCTGCACGCATACGGCCAACTTGGTCTTTGCTGTACAAG
GGATTGTAGGGCGTAATATTTTTGTAGGGGGTGGAATCGGCGTGTTTACG
GGGTGTGTCATTACAGATTCAATTTGTTTTTTGGCATTCTACGGCGCAGG
TTTTAGCATTTTCATTGGAGCAGGAGGTGGGATTTTTGCTGGCTGCGAGA
TCATGTTAAACAGTGCCATTGGCCATAAGGCCGGTGTTGGGATAGCTGTG
GCTGTGGGAGCAGGCACAGGCTTGTTCTACGGCACGGTATTTTCGAAAAA
TTTGGGGATTACACTGTTCAACACACTTGGCGTGTTCATATTTGTTGGCA
CGGGTCGCCTGGCTCTTGTGGGGTGTCCCTTCGCGCACCAAAATGCCATA
GCGGCCTGGCAGCTTTTGGGAGGAGCCATCTACCTCGGAACAGGTCAAGC
CGTGGTGATTGGTTGTGTTTTCACAAGGTCGTTGGGCCTTGATTCGTTCA
CAGGGCTGGGCGGAGATATTTTTGTTGGTGCTGGACAGCTGGTATTGGTC
CACTCTGTGTTCACGAGCAACACGGGCATAACTGCCTTCCTCGGACAGGG
CTCGGACTTGTACTTGGCAGCGGGAAGTGCGTATATAAAGCATGTGAATG
CCTCGATAAATGCCGGGATACACCTTGTGAGTGAGGACCTGGCGGGGTTC
TATGTCGCGGGGAGGGAGTGCGAAGTCAAAACGTTGGAGTCAGATGCGAT
CACAAAATTCAAGGAGAGAGGATATGCACTGTGTTACAAGGGGCTTGACG
GTAACGAGAAGGAGGAGATCGAGGGGGAGGGAGTTGCCCTGGTGGTGGTC
CAGAACTTGCAGGGCCGTCAGCGTTTGGGGGGATGGCGGGGATGGACTCT
GCCGGATACCAGCCCGGCGCTCCTATATTTGGGTGGGAACATATCGTCGT
GCCAGATATGTGGTTTGGACAACGTGGAAGTGCAAGGGCCTGCGACGGGG
GCATGTTATGACGCAGAGGCGACAGAACCGGCGGTCTGTCCAGCAGATCA
ATCTCCTCGTAAGACAGCAGCATTAGCGGGCGAGCCACCTGTAGTAATAG
CGCCAGTTGCCAACACCATTATCGACAGCAGCAGCAGCAGCAACTCCACA
CGTGATGTCAAGAACAAACTCTTTGGATTGAACGCCAGGGTCCGTCGACT
CATTGCAGGCAGGAGCGAGAACGATCGCGTAAGACAAGCCACAGAGGCCA
CAGAAGCAGCAGCCGCAGCGGCAGCAGATGATGACCACGAGCCAGATGCC
TTTCTACCTGATACATACGTGATTACTGCTGACTTGGTTCTCAACTGCTC
TTCTTTGTTCTCCACCACGAACGAAAGTGTTGTTGTCGCCACTTGTGGAT
GTGGTACCACGGCAAGGGAGCTGCAAGACCTGTTGGAGGAGAGTTGGCTT
AAGGATCTGGGAGCAGAGGACGATACTACCGTGGTCATAACGCCTTTCAA
GTCCTCTGACAGTTTGCTTGAGACCTTGGGAATTCTTTCTATCAATGGAA
GAAGTAACAGTAGCGGTAGTAGCAGTAATCCCTCCGAACCCTCCACGGCG
TGTACCAAACAAGAGATCTATGCGACTTACCTGCATACGACTGACAAGGT
CACGTTCGAGAAGCTCAAACACTCCCTCTTGGCCACCGACAGCAGCAGCA
GCACTAGCGGCAGAAGTAATATCATCACTTTGCTCTCAAGCCGCCTATCT
CTTCTCTTGGCGGCCCTCTACCCGCAGATTTGCCACGTTAATCTTACCCT
ACAAGACAGCCTCTTTGTGCCCCCCCCCGTAAAAAATCCTACCTCTTCAA
TCGGTACGGCCGCAAGCAGTGACAGCAGCGGCAACAACCGACCATCAGGC
ATCTCGGGCGGCATCACTTTACCGCGCGTGTGGGTGAATATCACCACGCC
TGTAATTTCGGTAGGGAACACGTACCAAGTGGCCATCTCTGACTTTGATG
ACGGGGATCGTGTGGGTTTACAGCTGGTGGCTTCTTTTTCGAAAGATAAG
AAGGACAAGAAGGCCACCCCATCTCTCTTCTTTCAATCTACCCCTCGGCC
TCTGTACACATTTCGTCCATTCGATGCGCTGGCAGGAAACCAGACATGGG
GATGGCAGACTTCTGCTCTGACGTTTAGGGGTATGGGTAGCGGGCCATTT
TTCCTGAAAGCATTTGATATTTTGGAGCCGAAGCGGTTTGTGCTGAGTCA
AGCCTTTGAATTGGAAGGGGTGACTGCCACAGCTGGTACTGTGAGAGGGC
TCAATGCTGGGACAAGGAATGCAGGAACAAGCTCTGCGACATTAAAGACG
AGGGCCGAGCACATTGTCCGGCGGCTTTCCGGCCAATTTTCCGGAAGCGA
GGAAGAGGAAGAGCAGCAAGATATCCCCAAGCTCGAGGACAACGACGACA
GCAATCTTAACCTTATCTCCATAATGTCCACCCTGCTTGTCTCTCCCAAT
TCCGAGGAGGCATTTTCGATAACGAGGAACCTCTGGAAGGCTCTCCTTGC
CCTCCCCTCCTCTCAAAAGGCACTCAAAAACCCCGCCCTTGCTCGGCAAC
TCTTAGAGCGAGTGCCAGCCCTTCAAACCGCGCCTGCTATTCTTGCACTG
GATGCGAATGGCGAGGCCGGCTGGAAAGACTCGGTCCAGATTCAAGCTGC
TATGGGAAAAGCGATAGCTGATTTCATGGATATGTCCTTGTCTGCCCTGC
AACAGCAGCGACGGCAGCAGCAAAAGCAGAAAGCGGGTGCCTTGTTTCGT
CAAAATGACGAGGGGGTAGATACAGCGAACCAATGGCCGACTAAAATCTT
TGAAAGCTTAACGCCGGAAGAGGAGGCATTGGCGAAGCGTATAGCACAGG
AACGGGATATAGCATCGATGAATGTGTTGATGGATTCGCAGGCCGCGAGA
CGATTTGGGGGAATGACAATGGCGAGGCTCCAGGATGCGGGGGTAGGGGA
GGATATCAAAGAGATGCTTGGGTCGACCGACATATTTAGGGACTTAATTG
ATGACCCAGAACTGTGGAAGGCACTATGA
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Synonyms
Publications