NO09G00150.1, NO09G00150.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G00150.1
Unique Name	NO09G00150.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3280
Alignment location	chr9:80437..85796 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:80437..85796 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO09G00150.1 vs.
Match: EWM27801.1 (abc transporter g family member 7 [Nannochloropsis gaditana])

HSP 1 Score: 1063.1 bits (2748), Expect = 3.800e-307
Identity = 582/744 (78.23%), Postives = 638/744 (85.75%), Query Frame = 0

Query:    6 QLRPPL-PLRPLPRL--ILLPCLLLCSLLLIASPPLAHAG-WWSSSSKDVSALPTVAHDQVAPVRLDWEGITCELKLKTKEGSKNLLSQVTGHAEPGRLLAILGPSGSGKTTLLNVLAGQVPASSALTLHGRLYVNGQLVSHSSLPSSSSSSSSSEHTQAYVRQQDIFYSQLTVRETLLMAARLRLPSSLDLEQKTALVDSLLKRLGLAKAADTIVGDDKIRGISGGEKKRLSLACELLGSPSLIFADEPTSGLDSYQSFRVLENLKDLASKGGHTVIISIHQPRSSIFTMFDDVVLMTEGEVVYTGEAKAMVPYFAALGYPCPKNFNPAEHVLDLVSIDYTTVESEIASRTRVHALLSSHRASLPSLLTSIQSHRKERVATAKEGGQEGKGLIAHP-----RPPGKLEQFRLLFTRSWRQITRSTGANVARAASNVFSALVFGALFYQMGRGQSSIQDRMGLLQVAAINAAMSSLIKTITVFIKERLIVTRERSSGKGSTYGPGPYFISKLAAELPVTALFPCLFGGIMYPLAGLQMTPQKFLKFLGILIVESYAAAGFGMFVGTLVPSVDAGLAVAPAVMVLFIVLGGYYVNEKSVPLALRWIQDVSLIKYAFEALCINEFQGLEFTAEKRIGPGPPVTHNGEQVLQRLNFHESTVTRAVIRQGALAGVSYLLTYLMLAWKKPMFQRVLSPEEAAEAKEKKEKKEKKEKKRRWGRKKALGGSGQGTGVPVVNVPSTVRAVGL 741
            QL+PP  P   +P L  + LP LL  +LL +  P   H G WW  +S   +AL   +H++V+PVRLDWEGITC+L++KT+EGSKNLLSQVTGHAEPGRLLAILGPSGSGKTTLLNVLAGQVPAS+ALTL GRLYVNGQL+S S    SSS SSS ++TQAYVRQQD+FYSQLTVRETLLMAARLRLP SL L +KT+LVD LLKRLGLAKAADTIVGDDK+RGISGGEKKRLSLACELLGSPSLIFADEPTSGLDSYQS RV+ENLKDLA++GGHTV+ISIHQPRSSIFT+FDDVVLMTEGEVVY GEA  MVPYFA+LGYPCPKNFNPAEHVLDLVS+DYTT ESE+ SRTRV ALL+SHR  LPSLL+SIQS R     ++     +G GL+        + PG+ EQ RLLFTRSWRQITRSTGAN+ARAASN+FSALVFG LF+QMGRGQSS+QDRMGLLQVAAINAAMSSLIKTITVFIKERLIV RERSSGKGS+YGPGPYFISKLAAELPVTALFPCLFGGIMYPLAGLQMT +KFL FLG+LI+ESYAAAGFGMFVGTLVPSVDAGLAVAPAVMVLFIVLGGYYVNEKSVP+ALRWIQDVSLIKYAFEALCINEFQGLEF  EKR+GPGPP    GEQVLQRLNFHESTVTRAV+RQ ALAGVSYLLTYLMLA K+P FQRVLSPEE  + K+ K K EKK K +  G+      SGQ  GVPVV  PS+VR VGL
Sbjct:    9 QLQPPFRPPHHVPLLSAVKLPGLLAVTLLALLLP-FTHGGYWWQGNSN--TALSAASHERVSPVRLDWEGITCKLQVKTEEGSKNLLSQVTGHAEPGRLLAILGPSGSGKTTLLNVLAGQVPASNALTLSGRLYVNGQLLSAS---PSSSFSSSVDYTQAYVRQQDLFYSQLTVRETLLMAARLRLPPSLTLREKTSLVDRLLKRLGLAKAADTIVGDDKVRGISGGEKKRLSLACELLGSPSLIFADEPTSGLDSYQSLRVMENLKDLATRGGHTVVISIHQPRSSIFTLFDDVVLMTEGEVVYAGEAAKMVPYFASLGYPCPKNFNPAEHVLDLVSVDYTTSESEVLSRTRVAALLASHRGRLPSLLSSIQSSRHAHALSSTSSSPDGGGLVVKSTGTRLQRPGRFEQCRLLFTRSWRQITRSTGANMARAASNIFSALVFGTLFFQMGRGQSSVQDRMGLLQVAAINAAMSSLIKTITVFIKERLIVARERSSGKGSSYGPGPYFISKLAAELPVTALFPCLFGGIMYPLAGLQMTTRKFLTFLGVLIIESYAAAGFGMFVGTLVPSVDAGLAVAPAVMVLFIVLGGYYVNEKSVPVALRWIQDVSLIKYAFEALCINEFQGLEFEQEKRLGPGPPQVAKGEQVLQRLNFHESTVTRAVVRQSALAGVSYLLTYLMLALKRPKFQRVLSPEEMQKGKKNKMKGEKKAKGQIQGK------SGQ-AGVPVVEAPSSVR-VGL 738

The following BLAST results are available for this feature:

BLAST of NO09G00150.1 vs.

BLAST of NO09G00150.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27801.1	3.800e-307	78.23	abc transporter g family member 7 [Nannochloropsis...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO09G00150	NO09G00150	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO09G00150.1	NO09G00150.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO09G00150.1.cds1	NO09G00150.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00150.1.cds2	NO09G00150.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00150.1.cds3	NO09G00150.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00150.1.cds4	NO09G00150.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00150.1.cds5	NO09G00150.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00150.1.cds6	NO09G00150.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00150.1.cds7	NO09G00150.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00150.1.cds8	NO09G00150.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00150.1.cds9	NO09G00150.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00150.1.cds10	NO09G00150.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr9:80437..85796-
coding sequence from alignment at chr9:80437..85796-

mRNA sequence

>NO09G00150.1 ID=NO09G00150.1|Name=NO09G00150.1|organism=Nannochloropsis oceanica|type=mRNA|length=3280bp
GTGCTTGACCTAGGTGGTCGCTGTGGGCAGTGCAACAGGGAGGGTGGAGG
ACGGAGTGTGAGTGAAGCGTAGTCCATGCACTTGCTGGGTAGAGGTCAGG
TGACAATGACCGCAAGCACCAGCACGCGCCGATACAAGTGCATCCGCATT
ATTCTCGTGCATGCTATGGATATTGCGGTAGCACAAGCGTGGAAATGTGT
CCTCCACCCAATCACGGGGAGGGAGACAAGGGATCACCCACAGCTATGTG
TGCCCACACGGCGTCGGAAAAAGAGGAGAGGGAGGACCCAAAATATCTAC
ATGTCACGGCAACTGGCACAATTGCACGCCCCACAACTGTGTTAGTAGCG
TGTCCTGATTTCCTCCGCTGATATGCTGCTGTGGGACGAGCGCTGCCTGT
ATGAGACCAATGGAGATGGGATTGGAGGGCCTGGAAAGTGCATCTTATTT
AATCATATTAGAATCCTTGATCGTCCTTGCGGTCCGTCTCCAGCACCGCA
CACGTGGCTGTGGTCCCAAGTTTTGGGACAATTCATGGGGTGGCTGCTGC
GGGTGTACGCATTGATTTGATTCATAAAATGCGGATGGGGTGAGGGCCAT
GGAAGCATTGCGTCCTCGGTCCATCACAAACCTCCTGACGAAATACACAC
ACTAGCTGCAGCTGTCTCGAACCTCGGAGATACACAAATTTGGTTATGTA
TCAGTGTCGATTGAGACTTGAGACATTGAAAAGTGATTTTCAAAAATACC
CACACGCACGTGCAATAGGTTGGAGGAGCGAGTGGGTTGAAGGACGGTAA
GACGAGGAATAGAAGGACTTTGTATGTCCACTGTTCTGGTTACTTATGCG
TGTACCGCATGGTCAAATGACTGTGCCAAGTGTCTCACGCGCTTCCACTA
CTCCCTTTTCCCGCTGTAGGGCTACAGATTCCGGGTCTCCATTCTCCGGA
TGCTTCATCATGCCCAGCTTCGACCTCCCCTCCCCCTTCGTCCTCTGCCC
CGTCTCATCCTCCTCCCTTGCCTCTTACTCTGCAGCCTCCTTCTCATCGC
CTCCCCTCCCCTTGCCCATGCTGGTTGGTGGAGCTCCAGCAGTAAAGACG
TGTCAGCCTTGCCCACAGTTGCGCACGACCAGGTCGCCCCTGTCCGTTTG
GACTGGGAAGGCATTACGTGTGAGTTGAAGCTCAAGACGAAGGAGGGGAG
CAAGAACCTACTCTCGCAGGTAACCGGCCACGCCGAGCCCGGTCGTCTGC
TGGCTATCCTGGGCCCCAGCGGATCTGGGAAGACGACCCTTCTGAATGTC
TTGGCAGGGCAAGTCCCGGCCTCCTCCGCATTAACCCTCCATGGTCGCCT
CTACGTGAACGGCCAGCTCGTGTCGCATTCCTCCCTTCCTTCGTCTTCTT
CCTCCTCCTCCTCGAGTGAACACACGCAGGCCTATGTCCGCCAGCAAGAC
ATCTTTTACTCTCAACTCACCGTACGAGAGACTCTCTTGATGGCCGCACG
CCTCCGCCTCCCATCCTCCCTTGACCTCGAACAAAAAACGGCCTTGGTGG
ACTCCCTCCTCAAGCGCCTGGGGCTGGCCAAGGCGGCTGACACTATCGTA
GGGGACGATAAAATCCGCGGTATTTCGGGAGGGGAGAAGAAGAGGCTGTC
CCTGGCTTGCGAACTGCTGGGGAGCCCCAGCTTGATATTCGCCGACGAAC
CGACAAGTGGCTTGGACTCGTATCAGTCCTTCCGGGTACTTGAAAACCTC
AAGGACCTCGCCAGCAAGGGGGGGCACACGGTCATCATCTCCATCCACCA
GCCCCGCTCCTCCATCTTCACCATGTTCGATGACGTCGTCCTCATGACTG
AGGGAGAGGTGGTATATACCGGTGAAGCTAAGGCAATGGTGCCTTATTTC
GCGGCCCTTGGCTACCCATGTCCCAAGAATTTCAATCCCGCAGAGCATGT
TCTGGACTTGGTGTCCATTGATTACACGACCGTCGAAAGTGAGATCGCCT
CCCGCACTCGAGTCCATGCCCTCCTCTCCTCCCATCGTGCCTCCCTCCCC
TCTCTCCTCACGTCCATCCAATCCCACCGCAAGGAGCGGGTAGCAACCGC
GAAGGAGGGTGGTCAGGAGGGCAAAGGCCTCATCGCCCACCCTCGTCCTC
CCGGGAAGTTGGAGCAGTTCCGCCTTCTCTTCACCCGGTCCTGGAGGCAG
ATCACGCGGTCGACGGGCGCTAACGTTGCCCGGGCGGCCAGCAATGTGTT
CTCGGCGTTGGTTTTCGGAGCCTTATTCTATCAAATGGGCAGGGGCCAGT
CCTCCATTCAGGATCGGATGGGGCTTCTCCAAGTGGCAGCTATTAACGCC
GCCATGAGCAGTCTCATCAAGACCATCACTGTGTTCATCAAAGAGCGCCT
CATCGTCACCCGGGAGAGGAGCAGTGGCAAAGGCTCCACCTACGGTCCGG
GTCCCTATTTCATCAGTAAACTCGCTGCCGAGCTGCCCGTCACTGCCCTC
TTTCCCTGTCTCTTTGGTGGCATCATGTATCCTCTCGCAGGCTTGCAAAT
GACACCGCAGAAATTCCTCAAGTTCCTGGGCATCCTAATCGTCGAATCTT
ACGCGGCTGCCGGCTTTGGGATGTTCGTTGGCACGCTCGTCCCTAGCGTG
GATGCCGGCCTGGCCGTCGCCCCCGCCGTCATGGTGCTCTTCATCGTTTT
GGGTGGTTACTACGTCAACGAGAAATCTGTCCCCTTGGCCCTGCGGTGGA
TTCAGGATGTCTCCCTCATCAAGTACGCTTTCGAAGCGCTTTGCATCAAC
GAGTTTCAGGGGCTGGAATTTACAGCGGAGAAAAGAATTGGCCCAGGTCC
ACCTGTGACTCACAACGGCGAGCAAGTCTTGCAGCGACTCAACTTCCACG
AGTCCACTGTCACCCGCGCCGTTATCCGGCAAGGGGCCTTGGCAGGAGTG
TCGTATCTCCTCACTTACTTGATGCTGGCGTGGAAAAAACCCATGTTCCA
GCGGGTCCTGTCGCCGGAGGAAGCTGCTGAGGCGAAGGAGAAGAAGGAGA
AGAAGGAGAAGAAGGAGAAGAAGAGGAGATGGGGGAGGAAGAAGGCACTG
GGAGGGAGTGGGCAAGGCACTGGTGTGCCGGTGGTGAACGTACCTAGCAC
CGTACGGGCGGTGGGGTTATGAGATGGGTATGGAAGGCGGTGAAAATGAT
TGGTTGGGAGTGAAAGGAACAATTCGCACCGGCTTGGCGTGTGTGGAAAA
GAGAAGAGAATTCTGATTTGTGAGTCGTTT

protein sequence of NO09G00150.1

>NO09G00150.1-protein ID=NO09G00150.1-protein|Name=NO09G00150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=741bp
MLHHAQLRPPLPLRPLPRLILLPCLLLCSLLLIASPPLAHAGWWSSSSKD
VSALPTVAHDQVAPVRLDWEGITCELKLKTKEGSKNLLSQVTGHAEPGRL
LAILGPSGSGKTTLLNVLAGQVPASSALTLHGRLYVNGQLVSHSSLPSSS
SSSSSSEHTQAYVRQQDIFYSQLTVRETLLMAARLRLPSSLDLEQKTALV
DSLLKRLGLAKAADTIVGDDKIRGISGGEKKRLSLACELLGSPSLIFADE
PTSGLDSYQSFRVLENLKDLASKGGHTVIISIHQPRSSIFTMFDDVVLMT
EGEVVYTGEAKAMVPYFAALGYPCPKNFNPAEHVLDLVSIDYTTVESEIA
SRTRVHALLSSHRASLPSLLTSIQSHRKERVATAKEGGQEGKGLIAHPRP
PGKLEQFRLLFTRSWRQITRSTGANVARAASNVFSALVFGALFYQMGRGQ
SSIQDRMGLLQVAAINAAMSSLIKTITVFIKERLIVTRERSSGKGSTYGP
GPYFISKLAAELPVTALFPCLFGGIMYPLAGLQMTPQKFLKFLGILIVES
YAAAGFGMFVGTLVPSVDAGLAVAPAVMVLFIVLGGYYVNEKSVPLALRW
IQDVSLIKYAFEALCINEFQGLEFTAEKRIGPGPPVTHNGEQVLQRLNFH
ESTVTRAVIRQGALAGVSYLLTYLMLAWKKPMFQRVLSPEEAAEAKEKKE
KKEKKEKKRRWGRKKALGGSGQGTGVPVVNVPSTVRAVGL*

mRNA from alignment at chr9:80437..85796-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO09G00150.1 ID=NO09G00150.1|Name=NO09G00150.1|organism=Nannochloropsis oceanica|type=mRNA|length=5360bp|location=Sequence derived from alignment at chr9:80437..85796- (Nannochloropsis oceanica)
GTGCTTGACCTAGGTGGTCGCTGTGGGCAGTGCAACAGGGAGGGTGGAGG
ACGGAGTGTGAGTGAAGCGTAGTCCATGCACTTGCTGGGTAGAGGTCAGG
TGACAATGACCGCAAGCACCAGCACGCGCCGATACAAGTGCATCCGCATT
ATTCTCGTGCATGCTATGGATATTGCGGTAGCACAAGCGTGGAAATGTGT
CCTCCACCCAATCACGGGGAGGGAGACAAGGGATCACCCACAGCTATGTG
TGCCCACACGGCGTCGGAAAAAGAGGAGAGGGAGGACCCAAAATATCTAC
ATGTCACGGCAACTGGCACAATTGCACGCCCCACAACTGTGTTAGTAGCG
TGTCCTGATTTCCTCCGCTGATATGCTGCTGTGGGACGAGCGCTGCCTGT
ATGAGACCAATGGAGATGGGATTGGAGGGCCTGGAAAGTGCATCTTATTT
AATCATATTAGAATCCTTGATCGTCCTTGCGGTCCGTCTCCAGCACCGCA
CACGTGGCTGTGGTCCCAAGTTTTGGGACAATTCATGGGGTGGCTGCTGC
GGGTGTACGCATTGATTTGATTCATAAAATGCGGATGGGGTGAGGGCCAT
GGAAGCATTGCGTCCTCGGTCCATCACAAACCTCCTGACGAAATACACAC
ACTAGCTGCAGCTGTCTCGAACCTCGGAGATACACAAATTTGGTTATGTA
TCAGTGTCGATTGAGACTTGAGACATTGAAAAGTGATTTTCAAAAATACC
CACACGCACGTGCAATAGGTTGGAGGAGCGAGTGGGTTGAAGGACGGTAA
GACGAGGAATAGAAGGACTTTGTATGTCCACTGTTCTGGTTACTTATGCG
TGTACCGCATGGTCAAATGACTGTGCCAAGTGTCTCACGCGCTTCCACTA
CTCCCTTTTCCCGCTGTAGGGCTACAGATTCCGGGTCTCCATTCTCCGGA
TGCTTCATCATGCCCAGCTTCGACCTCCCCTCCCCCTTCGTCCTCTGCCC
CGTCTCATCCTCCTCCCTTGCCTCTTACTCTGCAGCCTCCTTCTCATCGC
CTCCCCTCCCCTTGCCCATGCTGGTTGGTGGAGCTCCAGCAGTAAAGACG
TGTCAGCCTTGCCCACAGTTGCGCACGACCAGGTCGCCCCTGTCCGTTTG
GACTGGGAAGGCATTACGTGTGAGTTGAAGCTCAAGACGAAGGAGGGGAG
CAAGAACCTACTCTCGCAGGTGCGTGCGTTCATGAGGGATTTTAGGGCTG
CTAGCGTCCGGCAGAAAAGGGGGAAAAGATATGGGCGAGTGCATGCGAGG
GAGGGAGGAAGGGAGAGGAAGAGGAGGAAAAAGGAAAGGGGGTAGGAGGT
TAACTGGCGTCCCACTATTACCGTAGGTAAAAGGTGTGGGGCATCTGGTC
CGCAAGATGGGGCATCAGTTCTTTGATGACATGCCTCTCCTTCATCACTC
ACTGTCTCCTCCGCCAGGCATGTCGATGGCCATACGTATTGTGTCCCTTC
AGTACCTGATCTTTTACTGTCATGATATTTGGATTCACTCGCGGCTTAGC
CACGCTCCATGCCGATCCCACGGTTTATTAAAACACCTGTACTCAACTCC
ATTGTACTTCTCCAACCATCACTATTATCGTCCTCCTCAGGTAACCGGCC
ACGCCGAGCCCGGTCGTCTGCTGGCTATCCTGGGCCCCAGCGGATCTGGG
AAGACGACCCTTCTGAATGTCTTGGCAGGGCAAGTCCCGGCCTCCTCCGC
ATTAACCCTCCATGGTCGCCTCTACGTGAACGGCCAGCTCGTGTCGCATT
CCTCCCTTCCTTCGTCTTCTTCCTCCTCCTCCTCGAGTGAACACACGCAG
GCCTATGTCCGCCAGCAAGACATCTTTTACTCTCAACTCACCGTACGAGA
GACTCTCTTGATGGCCGCACGCCTCCGCCTCCCATCCTCCCTTGACCTCG
AACAAAAAACGGCCTTGGTGGACTCCCTCCTCAAGCGCCTGGGGCTGGCC
AAGGCGGCTGACACTATCGTAGGGGACGATAAAATCCGCGGTATTTCGGG
AGGGGAGAAGAAGAGGCTGTCCCTGGCTTGCGAACTGCTGGGGAGCCCCA
GCTTGATATTCGCCGACGAACCGACAAGTGAGTGGAATAAAGCGGGCAGA
AGGGGAGGGAGGGAGACGCGGGACGGAATTCACCTGTTTACATACACACG
CCCACTCTCGCTGGCCTTCCTCTTTCTCCTCCTTTTCCCCTCCTCTTCAT
CTTGCTATTCCTCTATCTCTTTCCCTTCTCTACACCTCTATTTCTCTGTC
TCAACTCCCCCTCTACTTTCCCTCCTCCTTCCCTTGCACCAGGTGGCTTG
GACTCGTATCAGTCCTTCCGGGTACTTGAAAACCTCAAGGACCTCGCCAG
CAAGGGGGGGCACACGGTCATCATCTCCATCCACCAGCCCCGCTCCTCCA
TCTTCACCATGTTCGATGACGTCGTCCTCATGACTGAGGGAGAGGTGGTA
TATACCGGTGAAGCTAAGGCAATGGTGCCTTATTTCGCGGCCCTTGGCTA
CCCATGTCCCAAGAATTTCAATCCCGCAGAGCATGTTCTGGACTTGGGTA
CGTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTCTTCTCTCAGGCGTC
AGAAATATCGCTGTCCCCTTGCCCTTGTATCTGTCCCTTTCACCTTCCCC
TCCCTCCCTCCCTCTCTCCGTCAGTATCCATCGATAAATCGACCGTCGAG
AACGAGGCCATCGCCGCGCACCACGGCATCCTCACTTCCTTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCTTCAGTGTCCATTGATTACACGACCGTCG
AAAGTGAGATCGCCTCCCGCACTCGAGTCCATGCCCTCCTCTCCTCCCAT
CGTGCCTCCCTCCCCTCTCTCCTCACGTCCATCCAATCCCACCGCAAGGA
GCGGGTAGCAACCGCGAAGGAGGGTGGTCAGGAGGGCAAAGGCCTCATCG
CCCACCCTCGTCCTCCCGGGAAGTTGGAGCAGTTCCGCCTTCTCTTCACC
CGGTCCTGGAGGCAGATCACGCGGTCGACGGGCGCTAACGTTGCCCGGGC
GGCCAGCAATGTGTTCTCGGCGTTGGTTTTCGGAGCCTTATTCTATCAAA
TGGGCAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGATCGGGAGGGGGT
GGGGGGTGGTAAGGGAAAGAAAAAGTAAAGAAGCTCTCGTTTTCCACTCC
TTTGCCTGACTCACCTTTCCTCCCTCCCTCCCTCACTCAATCAATCACTC
ACTCACTCACTCACCCACCCACTCACTCCCTTTGCCTGACTCACCTTCCC
TCCCTCCCTCCCTCCCTCCCACCTTCCCTCGTTCCCTCCCTCCCTCCCTT
CCTCCCTCCCTCCCTTTGAACAGGGGCCAGTCCTCCATTCAGGATCGGAT
GGGGCTTCTCCAAGTGGCAGCTATTAACGCCGCCATGAGCAGTCTCATCA
AGACCATCACTGTGAGTCCCTCCCTTCCCTCCCTCCCTCCTTCCTTCCCT
TTTCCCATCGGTTGCCATTCATCATCCATTAGCAAAGTGAAATGTCCCTT
AGTCCGCCCTCTCACCCTCCCTCCCTCCCACCCTCCCTCCCTCCCTCCCT
CAGGTGTTCATCAAAGAGCGCCTCATCGTCACCCGGGAGAGGAGCAGTGG
CAAAGGCTCCACCTACGGTCCGGGTCCCTATTTCATCAGTAAACTCGCTG
CCGAGCTGCCCGTCACTGCCCTCTTTCCCTGTCTCTTTGGTGGCATCATG
TATCCTCTCGCAGGTACACCCTCCCTCCCTCCCTCCTTCTCTGCCTTGTC
TTTCCCTCTCACTGTTCTCTCGATCCGCCTCTTTAGAAAGATGTCAACCC
GATAATCAAGTCAATGAAATGAACCTATAACGACTTACGAAAGCAATCAA
CTATATATAAATCCAACAGGCTTGCAAATGACACCGCAGAAATTCCTCAA
GTTCCTGGGCATCCTAATCGTCGAATCTTACGCGGCTGCCGGCTTTGGGA
TGTTCGTTGGCACGCTCGTCCCTAGCGTGGATGCCGGCCTGGCCGTCGCC
CCCGCCGTCATGGTGCTCTTCATCGTTTTGGGTGGTACGCTCCTCCTTCC
CCTCCTTCCCTCCCTTCCTCCCTCCCTCCTGCCGCCAGATGTTTTCAGGT
GCCTCATGACCCGCTCCTCGTTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCTTTAGGTTACTACGTCAACGAGAAATCTGTCCCCTTGGCCCTGCGGTG
GATTCAGGATGTGCGTACGAAGGGAGGGAGGGAGAGAGGGAGGGAGAGAG
GGAGGGAGGGAGGGAGTGGGTCGTTGTATTATTTTTCCTTTTGTCCATGA
ATCATTCACCCCTCCCTTCCTCCACTCTCTCTCTCTCCCCTGCCTGCCTT
CACCCCTCCCGCCCGCCCATCCACGTACTCTCCCTCTTTTCTCCCTACTT
TTTCCTTTGTGCTCCTAACACGCTTGACGAAACATCAAATTTTGCTTATA
CAGTGTCCGTCCGGCCTTCCTTTCCTCCCTCCCTCCCTCTTTTCCTCTCT
TCCCCCGACCCCTCGTCAAGTACGCTTTCAAAGCAAATCATCAGACTCAA
TCCACCTTTCTTTCCTCCCGTCCCTCAGGTCTCCCTCATCAAGTACGCTT
TCGAAGCGCTTTGCATCAACGAGTTTCAGGGGCTGGAATTTACAGCGGAG
AAAAGAATTGGCCCAGGTAGGGAGGGAGGAAGAGAGGAGTAGAGGGAGGG
AGGAAGGGAGGGAGGCAATATACCTGCATAGAGTGGGGGTCACAACTCTT
ATTTTATCGTGGGTTTTACCTCATTATTTCCTTCCTTCTATCCCTCCTAT
CCTCCCTCCCTCTTTCCTTTCTCTAGGTCCACCTGTGACTCACAACGGCG
AGCAAGTCTTGCAGCGACTCAACTTCCACGAGTCCACTGTCACCCGCGCC
GTTATCCGGCAAGGGGCCTTGGCAGGAGTGTCGTATCTCCTCACTTACTT
GATGCTGGCGTGGAAAAAACCCATGTTCCAGCGGGTCCTGTCGCCGGAGG
AAGCTGCTGAGGCGAAGGAGAAGAAGGAGAAGAAGGAGAAGAAGGAGAAG
AAGAGGAGATGGGGGAGGAAGAAGGCACTGGGAGGGAGTGGGCAAGGCAC
TGGTGTGCCGGTGGTGAACGTACCTAGCACCGTACGGGCGGTGGGGTTAT
GAGATGGGTATGGAAGGCGGTGAAAATGATTGGTTGGGAGTGAAAGGAAC
AATTCGCACCGGCTTGGCGTGTGTGGAAAAGAGAAGAGAATTCTGATTTG
TGAGTCGTTT

Coding sequence (CDS) from alignment at chr9:80437..85796-

>NO09G00150.1 ID=NO09G00150.1|Name=NO09G00150.1|organism=Nannochloropsis oceanica|type=CDS|length=2223bp|location=Sequence derived from alignment at chr9:80437..85796- (Nannochloropsis oceanica)
ATGCTTCATCATGCCCAGCTTCGACCTCCCCTCCCCCTTCGTCCTCTGCC
CCGTCTCATCCTCCTCCCTTGCCTCTTACTCTGCAGCCTCCTTCTCATCG
CCTCCCCTCCCCTTGCCCATGCTGGTTGGTGGAGCTCCAGCAGTAAAGAC
GTGTCAGCCTTGCCCACAGTTGCGCACGACCAGGTCGCCCCTGTCCGTTT
GGACTGGGAAGGCATTACGTGTGAGTTGAAGCTCAAGACGAAGGAGGGGA
GCAAGAACCTACTCTCGCAGGTAACCGGCCACGCCGAGCCCGGTCGTCTG
CTGGCTATCCTGGGCCCCAGCGGATCTGGGAAGACGACCCTTCTGAATGT
CTTGGCAGGGCAAGTCCCGGCCTCCTCCGCATTAACCCTCCATGGTCGCC
TCTACGTGAACGGCCAGCTCGTGTCGCATTCCTCCCTTCCTTCGTCTTCT
TCCTCCTCCTCCTCGAGTGAACACACGCAGGCCTATGTCCGCCAGCAAGA
CATCTTTTACTCTCAACTCACCGTACGAGAGACTCTCTTGATGGCCGCAC
GCCTCCGCCTCCCATCCTCCCTTGACCTCGAACAAAAAACGGCCTTGGTG
GACTCCCTCCTCAAGCGCCTGGGGCTGGCCAAGGCGGCTGACACTATCGT
AGGGGACGATAAAATCCGCGGTATTTCGGGAGGGGAGAAGAAGAGGCTGT
CCCTGGCTTGCGAACTGCTGGGGAGCCCCAGCTTGATATTCGCCGACGAA
CCGACAAGTGGCTTGGACTCGTATCAGTCCTTCCGGGTACTTGAAAACCT
CAAGGACCTCGCCAGCAAGGGGGGGCACACGGTCATCATCTCCATCCACC
AGCCCCGCTCCTCCATCTTCACCATGTTCGATGACGTCGTCCTCATGACT
GAGGGAGAGGTGGTATATACCGGTGAAGCTAAGGCAATGGTGCCTTATTT
CGCGGCCCTTGGCTACCCATGTCCCAAGAATTTCAATCCCGCAGAGCATG
TTCTGGACTTGGTGTCCATTGATTACACGACCGTCGAAAGTGAGATCGCC
TCCCGCACTCGAGTCCATGCCCTCCTCTCCTCCCATCGTGCCTCCCTCCC
CTCTCTCCTCACGTCCATCCAATCCCACCGCAAGGAGCGGGTAGCAACCG
CGAAGGAGGGTGGTCAGGAGGGCAAAGGCCTCATCGCCCACCCTCGTCCT
CCCGGGAAGTTGGAGCAGTTCCGCCTTCTCTTCACCCGGTCCTGGAGGCA
GATCACGCGGTCGACGGGCGCTAACGTTGCCCGGGCGGCCAGCAATGTGT
TCTCGGCGTTGGTTTTCGGAGCCTTATTCTATCAAATGGGCAGGGGCCAG
TCCTCCATTCAGGATCGGATGGGGCTTCTCCAAGTGGCAGCTATTAACGC
CGCCATGAGCAGTCTCATCAAGACCATCACTGTGTTCATCAAAGAGCGCC
TCATCGTCACCCGGGAGAGGAGCAGTGGCAAAGGCTCCACCTACGGTCCG
GGTCCCTATTTCATCAGTAAACTCGCTGCCGAGCTGCCCGTCACTGCCCT
CTTTCCCTGTCTCTTTGGTGGCATCATGTATCCTCTCGCAGGCTTGCAAA
TGACACCGCAGAAATTCCTCAAGTTCCTGGGCATCCTAATCGTCGAATCT
TACGCGGCTGCCGGCTTTGGGATGTTCGTTGGCACGCTCGTCCCTAGCGT
GGATGCCGGCCTGGCCGTCGCCCCCGCCGTCATGGTGCTCTTCATCGTTT
TGGGTGGTTACTACGTCAACGAGAAATCTGTCCCCTTGGCCCTGCGGTGG
ATTCAGGATGTCTCCCTCATCAAGTACGCTTTCGAAGCGCTTTGCATCAA
CGAGTTTCAGGGGCTGGAATTTACAGCGGAGAAAAGAATTGGCCCAGGTC
CACCTGTGACTCACAACGGCGAGCAAGTCTTGCAGCGACTCAACTTCCAC
GAGTCCACTGTCACCCGCGCCGTTATCCGGCAAGGGGCCTTGGCAGGAGT
GTCGTATCTCCTCACTTACTTGATGCTGGCGTGGAAAAAACCCATGTTCC
AGCGGGTCCTGTCGCCGGAGGAAGCTGCTGAGGCGAAGGAGAAGAAGGAG
AAGAAGGAGAAGAAGGAGAAGAAGAGGAGATGGGGGAGGAAGAAGGCACT
GGGAGGGAGTGGGCAAGGCACTGGTGTGCCGGTGGTGAACGTACCTAGCA
CCGTACGGGCGGTGGGGTTATGA

Synonyms

Publications