NO09G00140.1, NO09G00140.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G00140.1
Unique NameNO09G00140.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2108
Alignment locationchr9:78329..80436 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:78329..80436 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G00140.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G00140NO09G00140Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G00140.1NO09G00140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G00140.1.cds1NO09G00140.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G00140.1 ID=NO09G00140.1|Name=NO09G00140.1|organism=Nannochloropsis oceanica|type=mRNA|length=2108bp
ATGAAGCACATGCTCTGGGCCCATGCAGCACGTGCTCACGCAGGCAATAT
TTGGGTCTCTCTTTTTCATTTTTACCTTATTTCCTTCCCATATTCACCTT
TGCTGGGCATAGGAATGGTTCCACTCATAAAGAATGACTGGACAATGATG
TACAGCAATCACCGGGTCCCAGCCAGCAATCACCGGGTTCCAACCAATGA
GGTTGTAGACATCCCTCTCATAAATTTCAGTTGACAGACCATTTCCCCCA
CCTAGAACAACCATGGCTCGCCGCGTGCTTCTTTATGCCCCTCTCCTTGT
CTACACCCTCCTACTCCTTTTCCTCCTTCTCTCTGTGACATTTGGGGTTC
CTATAGACCCCAATGCCACATCCATGCCCGGTGAAGAGGTGCCCTGTAAG
TCATCAATGGATGTTGTGAATGGGACGGCACGCCTGACGCTCTGCATGCA
AGGCCGCAAGGTGTGGAAGGAGCGCCGCAACAACGATCGCACGACGCAAG
TGTTTGCCACAATTTTGAATGCAGGGGACTCACAAGTCTGCGACCTTCAC
GTCGAAGTCTCGAACATGGAGAATGCCATTCGTTGGTGGCCCACGTGGTT
CAACACTACTGTTTATCCTTATTTTACCTTGTTGCCGGGCCAGACGGTCT
CGGTGGGTGCTGTCATCCCGCAAGCCAAGGGTTTCCCGCAAATCAAAATT
ACTCAGATGCGGCCATGTGACGGGGAATCCCCACCTTTAGACGAGGAAGA
TGACATCGACATGACCAATGAGGGGGAGGGGCCCCCTCCGAGCGACAGTA
TAGACCTCGCACGAAATGCCACGACTGCGACAATAACAACGACAAAACCA
GCGGCGACGTCGGGATTGACAATAAATCCGACGGTTCTCACGACGCCTAC
CGATTCTACTATTCCTGCTAAGCACATATCAGTTGAGGTCAACAAAGCAG
AAGGAGAGCCCACAGGTGCGACTACAGCATCGGCAATGCCTGCGGATCTG
GCGACGGCAGCCGATTCCACGGCCGTGGCTCCTGCGACGGTTCCGGCTCC
CAAGGCTGACGCTCCAGAAGACGAGGCGGTTGAGGGGGAAGAAGAGAATG
AACAAGAAGAGATCCCTTCCGCCTTGAAGGGCAAGAAGAAGTGCGAAGTT
GTGAAGGGGGTCAACGGCCTCCAAGCGCGTTGGTGCGTTGACCTGTCGCC
CAAAGTGTGGGTAGAGCCGAGGCGGAAGAAGCGATACGTTCGTGTGGCTG
GAGAAGTGACGAATATAATGAGCAATGTTTCTCTGTGCAATATTGAGATT
TGGCTACAGAGCAACAAGTCAGCCGTATCCACGTGGCCTGAATGGTGGCC
GAATAGCAGCGATGAGCAATTGGATCCTGGCAATTCTTTCATGGTTGGAG
CGAATGTGTATTTTAAAAGAGGAAAGCCCCAGATCAAATTGCTGTCATTC
GATGAATGTGTAGATACTGGGGCTTTGCCGGAGGATCCTCCTGCTTCAGT
GCCCACAGGTGGATATGGCGGGGGGGGCGCGGATTTTGGTGGCGACGTTG
GAGGAGGACCTGCTCCTAGCCCGTGGCAGTCACCTACGCAGAGCCAGGGT
CAAGAGCAGCGGCAAGGGCAGCAGCAAGATGGAGGGCAGCAATGGACTGC
GCCTACACCTGTACCAAAGCCGACCACGGTCGACCTCGGTGAAGCATACA
ATAACAACAGTAGTAACGACAACAATAACGAAGACCACAGCAACAACGCC
AACAACAAAAACAACAACAATAATGATTGGAATAATGGAGGTGGTGGTGA
TGGTGAAAGAGGAGATGGAGGAGGAAGAGGGGATGGTGGTAGCCAATGGC
ATGTGTAGAGGGGAGAAGAGCCCCGAGTGAGTACAAAAAGGGAAAGATGA
AATGGAAGAGTTGATGATCGCTTTCATAAGTGGAAGGACGGACAGTAAGT
TTCTTGACGCTGCATACCCAGATGAACTAGGAAGATATTCGATGTGGTAA
GAGCAAGCTAGGAATGTGTAGCTTAAGAAAGAGAATATGATGTGCGGGCA
TGTACAAATTTAACGTCAAGTGAGTGCCTCGAGCAAAACAGATATTTCCA
ACTGAACA
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protein sequence of NO09G00140.1

>NO09G00140.1-protein ID=NO09G00140.1-protein|Name=NO09G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=532bp
MARRVLLYAPLLVYTLLLLFLLLSVTFGVPIDPNATSMPGEEVPCKSSMD
VVNGTARLTLCMQGRKVWKERRNNDRTTQVFATILNAGDSQVCDLHVEVS
NMENAIRWWPTWFNTTVYPYFTLLPGQTVSVGAVIPQAKGFPQIKITQMR
PCDGESPPLDEEDDIDMTNEGEGPPPSDSIDLARNATTATITTTKPAATS
GLTINPTVLTTPTDSTIPAKHISVEVNKAEGEPTGATTASAMPADLATAA
DSTAVAPATVPAPKADAPEDEAVEGEEENEQEEIPSALKGKKKCEVVKGV
NGLQARWCVDLSPKVWVEPRRKKRYVRVAGEVTNIMSNVSLCNIEIWLQS
NKSAVSTWPEWWPNSSDEQLDPGNSFMVGANVYFKRGKPQIKLLSFDECV
DTGALPEDPPASVPTGGYGGGGADFGGDVGGGPAPSPWQSPTQSQGQEQR
QGQQQDGGQQWTAPTPVPKPTTVDLGEAYNNNSSNDNNNEDHSNNANNKN
NNNNDWNNGGGGDGERGDGGGRGDGGSQWHV*
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mRNA from alignment at chr9:78329..80436+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G00140.1 ID=NO09G00140.1|Name=NO09G00140.1|organism=Nannochloropsis oceanica|type=mRNA|length=2108bp|location=Sequence derived from alignment at chr9:78329..80436+ (Nannochloropsis oceanica)
ATGAAGCACATGCTCTGGGCCCATGCAGCACGTGCTCACGCAGGCAATAT TTGGGTCTCTCTTTTTCATTTTTACCTTATTTCCTTCCCATATTCACCTT TGCTGGGCATAGGAATGGTTCCACTCATAAAGAATGACTGGACAATGATG TACAGCAATCACCGGGTCCCAGCCAGCAATCACCGGGTTCCAACCAATGA GGTTGTAGACATCCCTCTCATAAATTTCAGTTGACAGACCATTTCCCCCA CCTAGAACAACCATGGCTCGCCGCGTGCTTCTTTATGCCCCTCTCCTTGT CTACACCCTCCTACTCCTTTTCCTCCTTCTCTCTGTGACATTTGGGGTTC CTATAGACCCCAATGCCACATCCATGCCCGGTGAAGAGGTGCCCTGTAAG TCATCAATGGATGTTGTGAATGGGACGGCACGCCTGACGCTCTGCATGCA AGGCCGCAAGGTGTGGAAGGAGCGCCGCAACAACGATCGCACGACGCAAG TGTTTGCCACAATTTTGAATGCAGGGGACTCACAAGTCTGCGACCTTCAC GTCGAAGTCTCGAACATGGAGAATGCCATTCGTTGGTGGCCCACGTGGTT CAACACTACTGTTTATCCTTATTTTACCTTGTTGCCGGGCCAGACGGTCT CGGTGGGTGCTGTCATCCCGCAAGCCAAGGGTTTCCCGCAAATCAAAATT ACTCAGATGCGGCCATGTGACGGGGAATCCCCACCTTTAGACGAGGAAGA TGACATCGACATGACCAATGAGGGGGAGGGGCCCCCTCCGAGCGACAGTA TAGACCTCGCACGAAATGCCACGACTGCGACAATAACAACGACAAAACCA GCGGCGACGTCGGGATTGACAATAAATCCGACGGTTCTCACGACGCCTAC CGATTCTACTATTCCTGCTAAGCACATATCAGTTGAGGTCAACAAAGCAG AAGGAGAGCCCACAGGTGCGACTACAGCATCGGCAATGCCTGCGGATCTG GCGACGGCAGCCGATTCCACGGCCGTGGCTCCTGCGACGGTTCCGGCTCC CAAGGCTGACGCTCCAGAAGACGAGGCGGTTGAGGGGGAAGAAGAGAATG AACAAGAAGAGATCCCTTCCGCCTTGAAGGGCAAGAAGAAGTGCGAAGTT GTGAAGGGGGTCAACGGCCTCCAAGCGCGTTGGTGCGTTGACCTGTCGCC CAAAGTGTGGGTAGAGCCGAGGCGGAAGAAGCGATACGTTCGTGTGGCTG GAGAAGTGACGAATATAATGAGCAATGTTTCTCTGTGCAATATTGAGATT TGGCTACAGAGCAACAAGTCAGCCGTATCCACGTGGCCTGAATGGTGGCC GAATAGCAGCGATGAGCAATTGGATCCTGGCAATTCTTTCATGGTTGGAG CGAATGTGTATTTTAAAAGAGGAAAGCCCCAGATCAAATTGCTGTCATTC GATGAATGTGTAGATACTGGGGCTTTGCCGGAGGATCCTCCTGCTTCAGT GCCCACAGGTGGATATGGCGGGGGGGGCGCGGATTTTGGTGGCGACGTTG GAGGAGGACCTGCTCCTAGCCCGTGGCAGTCACCTACGCAGAGCCAGGGT CAAGAGCAGCGGCAAGGGCAGCAGCAAGATGGAGGGCAGCAATGGACTGC GCCTACACCTGTACCAAAGCCGACCACGGTCGACCTCGGTGAAGCATACA ATAACAACAGTAGTAACGACAACAATAACGAAGACCACAGCAACAACGCC AACAACAAAAACAACAACAATAATGATTGGAATAATGGAGGTGGTGGTGA TGGTGAAAGAGGAGATGGAGGAGGAAGAGGGGATGGTGGTAGCCAATGGC ATGTGTAGAGGGGAGAAGAGCCCCGAGTGAGTACAAAAAGGGAAAGATGA AATGGAAGAGTTGATGATCGCTTTCATAAGTGGAAGGACGGACAGTAAGT TTCTTGACGCTGCATACCCAGATGAACTAGGAAGATATTCGATGTGGTAA GAGCAAGCTAGGAATGTGTAGCTTAAGAAAGAGAATATGATGTGCGGGCA TGTACAAATTTAACGTCAAGTGAGTGCCTCGAGCAAAACAGATATTTCCA ACTGAACA
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Coding sequence (CDS) from alignment at chr9:78329..80436+

>NO09G00140.1 ID=NO09G00140.1|Name=NO09G00140.1|organism=Nannochloropsis oceanica|type=CDS|length=1596bp|location=Sequence derived from alignment at chr9:78329..80436+ (Nannochloropsis oceanica)
ATGGCTCGCCGCGTGCTTCTTTATGCCCCTCTCCTTGTCTACACCCTCCT
ACTCCTTTTCCTCCTTCTCTCTGTGACATTTGGGGTTCCTATAGACCCCA
ATGCCACATCCATGCCCGGTGAAGAGGTGCCCTGTAAGTCATCAATGGAT
GTTGTGAATGGGACGGCACGCCTGACGCTCTGCATGCAAGGCCGCAAGGT
GTGGAAGGAGCGCCGCAACAACGATCGCACGACGCAAGTGTTTGCCACAA
TTTTGAATGCAGGGGACTCACAAGTCTGCGACCTTCACGTCGAAGTCTCG
AACATGGAGAATGCCATTCGTTGGTGGCCCACGTGGTTCAACACTACTGT
TTATCCTTATTTTACCTTGTTGCCGGGCCAGACGGTCTCGGTGGGTGCTG
TCATCCCGCAAGCCAAGGGTTTCCCGCAAATCAAAATTACTCAGATGCGG
CCATGTGACGGGGAATCCCCACCTTTAGACGAGGAAGATGACATCGACAT
GACCAATGAGGGGGAGGGGCCCCCTCCGAGCGACAGTATAGACCTCGCAC
GAAATGCCACGACTGCGACAATAACAACGACAAAACCAGCGGCGACGTCG
GGATTGACAATAAATCCGACGGTTCTCACGACGCCTACCGATTCTACTAT
TCCTGCTAAGCACATATCAGTTGAGGTCAACAAAGCAGAAGGAGAGCCCA
CAGGTGCGACTACAGCATCGGCAATGCCTGCGGATCTGGCGACGGCAGCC
GATTCCACGGCCGTGGCTCCTGCGACGGTTCCGGCTCCCAAGGCTGACGC
TCCAGAAGACGAGGCGGTTGAGGGGGAAGAAGAGAATGAACAAGAAGAGA
TCCCTTCCGCCTTGAAGGGCAAGAAGAAGTGCGAAGTTGTGAAGGGGGTC
AACGGCCTCCAAGCGCGTTGGTGCGTTGACCTGTCGCCCAAAGTGTGGGT
AGAGCCGAGGCGGAAGAAGCGATACGTTCGTGTGGCTGGAGAAGTGACGA
ATATAATGAGCAATGTTTCTCTGTGCAATATTGAGATTTGGCTACAGAGC
AACAAGTCAGCCGTATCCACGTGGCCTGAATGGTGGCCGAATAGCAGCGA
TGAGCAATTGGATCCTGGCAATTCTTTCATGGTTGGAGCGAATGTGTATT
TTAAAAGAGGAAAGCCCCAGATCAAATTGCTGTCATTCGATGAATGTGTA
GATACTGGGGCTTTGCCGGAGGATCCTCCTGCTTCAGTGCCCACAGGTGG
ATATGGCGGGGGGGGCGCGGATTTTGGTGGCGACGTTGGAGGAGGACCTG
CTCCTAGCCCGTGGCAGTCACCTACGCAGAGCCAGGGTCAAGAGCAGCGG
CAAGGGCAGCAGCAAGATGGAGGGCAGCAATGGACTGCGCCTACACCTGT
ACCAAAGCCGACCACGGTCGACCTCGGTGAAGCATACAATAACAACAGTA
GTAACGACAACAATAACGAAGACCACAGCAACAACGCCAACAACAAAAAC
AACAACAATAATGATTGGAATAATGGAGGTGGTGGTGATGGTGAAAGAGG
AGATGGAGGAGGAAGAGGGGATGGTGGTAGCCAATGGCATGTGTAG
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Synonyms
Publications