NO08G04010.2, NO08G04010.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G04010.2
Unique NameNO08G04010.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2598
Alignment locationchr8:1124908..1127665 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:1124908..1127665 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO08G04010.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G04010NO08G04010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G04010.2NO08G04010.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G04010.2.cds1NO08G04010.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04010.2.cds2NO08G04010.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G04010.2 ID=NO08G04010.2|Name=NO08G04010.2|organism=Nannochloropsis oceanica|type=mRNA|length=2598bp
ATAACAGCGTCGCCTGGGGTACCACGAGACGCCGGGATAAATTGTGTAAG
ATAAGGCATGCATATGTACTGATCAATACTACAAGAAGTCGTGGCATTCC
CTGGTCAGTTCGCATGGGGGGTTTTTCCTTGCTCCATCATGTCGGAAGTA
GTACGGCTTCCCGTGCTGGCCGATTCGACTTCTTCGCCTGTCACAATGGC
TACCACTGCCCGTCGTGGCCCCTACCTCCTGATACCACTCTTGGCGATTC
TTGCCTTCTACAGCACTAATTTTGTCTTTGTGTGGAATCAGCAACAACCG
AGAGGCAACTTCCTATCCGGTCTCAACTTCACGTCGTCCCTTTCCCACCT
CCATTTGTCCTCCAATGCTTCCTCTTCCGGCCCTGCACTTTTCCCCTCTT
CTTCCTCTGCGTCTGCTTACGCCTCATTCCCTGCTTCTTCCTCTCAGTCA
GCTCCTGTCTCTCTCCCTGCTACTTCCTCCCTACCCTCCTCCCTCATATC
CTCCTCCTTTCATCCCACGTGTGACTACCCGCTCACTGAAGTAGACCCTT
CCTGCCCCCGCTTCACCAACATCAATCTCATCGCAAAAAGGGGCCTTGGA
GATCGCTTCCTTCAACTTGCTATTGTCATTCTTGTGGCTCTTGACACCGA
CAGTGTCCCCCTCCTTCTGGACATGCACACCGTGAATGGCAAACATGGGA
ACTACACGGGTCTGGAAGACTTCCTCCCCTTCGCCTCTTCGCTTCCCAGG
CTAGAGGATGTAATAGAGCACTATCCAACCCTGCGCCGAATTAATGCTGA
CCACCCAGGGAGCTACCGTGATAAGATCACCTGGCTGAAGGCAGGAGGTA
AACTGCAGGAGGGCGGGAAGGAGGGAGGAGAGACAGGGTGCAACCTTCTC
ATGACCATTGACATGGACGTGTGCGGTGACTTCCGCGAGGAAAGTTGTTA
CTTCCTTGGAGAGCCACAGTATACCCGAATCAGGGACCTAGTCCGCTGTT
GGATGCTTAAATTGAGGCCCGAGGCCATTCCTAGGTTGGTGTGGAGTGAC
GCACAAGAGGACGGAAAGGAGGGCGGGGTACGGCAAGAGCAGCAGCAGCA
GCAGGAGGAGGAGGAGGAGCAGCAGTGTTATAATGTGGCAGTACATTTGC
GGATTGGGGATGAAATGCTGCACCAGACAGATGCATTGTTCTTCGAAAAT
TTGAAGAAGGGTGTGGGTACGGCGCTGGTGGGGTTTGACTGCATGCACTA
TCACTTTTTCTACGAGGAAGATGCGATTATCGAGTTGGAAAAGGCCACGG
AGGAGAAAAGGAATGCAGAAATCTTCAAACAGGAGCACAAAGCGAAACTT
CAAAAGGAGAAGGAAAAGAAGGAGGCGGTTGCGGCACAAGGAGAGAAGCA
AGAACAGGATGAGGAGAAGAATAATAAGGACGAAAAGTTGGAGGAGGTGG
TGGTGGTAGAAAGAGAAGGGGACGAGCAGATTGAAGAGGAGTCGACTGCG
AAAATAACGGACGAGGAGGAGGTAGAGGACAAGGAGATGGTGGTGCTAGA
AAAGAACAAGGAAGAGCAGGTTGAAGAGGCGGAGGTGGTCGTGAAGAAGG
GGGAAAGAATAAATAAGAGTAGATCGGTGGGTCAGGGGGCACCATTTCCC
ATTTTAACGGATATTTTCAGGGAGGAGATAGCCATAGTAGAGGAATCAGT
GGTGAACAGAGTGAAGAAGGAGAAGGAAAGTAGGCAAGAAGGGAGGGAAG
AGGAGGGGCTGAGAAAAGAAGGAGAGGAGGAGAGTGGGATCGAAGGGGCA
ATGGGAATTGCCAATAATACTTATCAAACCAGGTAGGTTTGCCTTCCCTC
CCTATCTCGCTTCATCCCTGCGCGTCCCCCATATTCCATGCCCCCTTCGA
CTCCATCCTTACTGTTGCTAATTGGATGAAACATGTGGCTGGCCCTTATC
GGAGAACCATGGCATTTCATGTAATCTTGTCAACACCAGATGATTTCTCT
TCCCCCTCCCCTCCCTTCTGTCCTCGCTCCCTCCCTCATCTTTCCAACAG
GACAATACGAAAACAACGTATCCGGGTATCCTACCACGGCAGAATGGATG
TCCGCAGCACCCTCTACCACTTCATGGATGCGGACATGTTGGTTTTGACA
GGTTCTTCATTCCCTTACATGGCAGCGCTGGTCACCCCAAAGCCCGTCAT
TCTGATGGCCCAGCCAAAGGAGGCATCACGACAAGGGCCACGGGGTGAAG
GGACTGTGGGGGGCACATGGTTCGGAGGGTACGGAATCGGAGGGAGAACC
GGAGGTATTGCCCTGCTGTCGGAGCAAGGGAACGTGATCAGCCCGGAGAC
GGACACGGAGTGGAGAGCAATGGTCGAGATGAAATATTTGGATTCGGCGG
GGCGAAGGGTGCCGTACGTGTAGAAATAGAAATAGAAAAAAATATAAAAA
AGAAATGAGAAATTAAGAAATAGGGGTAGGGAGTAGGTAGGAAGAGGAAA
TTTGACGGGACTCGTGGTCAAAACGTAAATTGTGAGATTTTATGTTCGGT
ATGGAAATGACATTACAATAATAAATAAATAAATAATTAATGCTGACG
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protein sequence of NO08G04010.2

>NO08G04010.2-protein ID=NO08G04010.2-protein|Name=NO08G04010.2|organism=Nannochloropsis oceanica|type=polypeptide|length=566bp
MSEVVRLPVLADSTSSPVTMATTARRGPYLLIPLLAILAFYSTNFVFVWN
QQQPRGNFLSGLNFTSSLSHLHLSSNASSSGPALFPSSSSASAYASFPAS
SSQSAPVSLPATSSLPSSLISSSFHPTCDYPLTEVDPSCPRFTNINLIAK
RGLGDRFLQLAIVILVALDTDSVPLLLDMHTVNGKHGNYTGLEDFLPFAS
SLPRLEDVIEHYPTLRRINADHPGSYRDKITWLKAGGKLQEGGKEGGETG
CNLLMTIDMDVCGDFREESCYFLGEPQYTRIRDLVRCWMLKLRPEAIPRL
VWSDAQEDGKEGGVRQEQQQQQEEEEEQQCYNVAVHLRIGDEMLHQTDAL
FFENLKKGVGTALVGFDCMHYHFFYEEDAIIELEKATEEKRNAEIFKQEH
KAKLQKEKEKKEAVAAQGEKQEQDEEKNNKDEKLEEVVVVEREGDEQIEE
ESTAKITDEEEVEDKEMVVLEKNKEEQVEEAEVVVKKGERINKSRSVGQG
APFPILTDIFREEIAIVEESVVNRVKKEKESRQEGREEEGLRKEGEEESG
IEGAMGIANNTYQTR*
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mRNA from alignment at chr8:1124908..1127665-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G04010.2 ID=NO08G04010.2|Name=NO08G04010.2|organism=Nannochloropsis oceanica|type=mRNA|length=2758bp|location=Sequence derived from alignment at chr8:1124908..1127665- (Nannochloropsis oceanica)
ATAACAGCGTCGCCTGGGGTACCACGAGACGCCGGGATAAATTGTGTAAG ATAAGGCATGCATATGTACTGATCAATACTACAAGAAGTCGTGGCATTCC CTGGTCAGTTCGCATGGGGGGTTTTTCCTTGCTCCATCATGTCGGAAGTA GTACGGCTTCCCGTGCTGGCCGATTCGACTTCTTCGCCTGTCACAATGGC TACCACTGCCCGTCGTGGCCCCTACCTCCTGATACCACTCTTGGCGATTC TTGCCTTCTACAGCACTAATTTTGTCTTTGTGTGGAATCAGCAACAACCG AGAGGCAACTTCCTATCCGGTCTCAACTTCACGTCGTCCCTTTCCCACCT CCATTTGTCCTCCAATGCTTCCTCTTCCGGCCCTGCACTTTTCCCCTCTT CTTCCTCTGCGTCTGCTTACGCCTCATTCCCTGCTTCTTCCTCTCAGTCA GCTCCTGTCTCTCTCCCTGCTACTTCCTCCCTACCCTCCTCCCTCATATC CTCCTCCTTTCATCCCACGTGTGACTACCCGCTCACTGAAGTAGACCCTT CCTGCCCCCGCTTCACCAACATCAATCTCATCGCAAAAAGGGGCCTTGGA GATCGCTTCCTTCAACTTGCTATTGTCATTCTTGTGGCTCTTGACACCGA CAGTGTCCCCCTCCTTCTGGACATGCACACCGTGAATGGCAAACATGGGA ACTACACGGGTCTGGAAGACTTCCTCCCCTTCGCCTCTTCGCTTCCCAGG CTAGAGGATGTAATAGGTAAGGTCTTCTCACCCCTCATATCTCGCTTCCC TTGCTTTCTTTCTTTCACCCTGTTAAACTCTTGTCTCCAGCATTTAAAGA TAAATGCTCTTGTCGATTATGGGTTTACGTCTGATCCCTCCCTCCCTCCC TCCCTCCCACCTTCCTCTTTACTTAGAGCACTATCCAACCCTGCGCCGAA TTAATGCTGACCACCCAGGGAGCTACCGTGATAAGATCACCTGGCTGAAG GCAGGAGGTAAACTGCAGGAGGGCGGGAAGGAGGGAGGAGAGACAGGGTG CAACCTTCTCATGACCATTGACATGGACGTGTGCGGTGACTTCCGCGAGG AAAGTTGTTACTTCCTTGGAGAGCCACAGTATACCCGAATCAGGGACCTA GTCCGCTGTTGGATGCTTAAATTGAGGCCCGAGGCCATTCCTAGGTTGGT GTGGAGTGACGCACAAGAGGACGGAAAGGAGGGCGGGGTACGGCAAGAGC AGCAGCAGCAGCAGGAGGAGGAGGAGGAGCAGCAGTGTTATAATGTGGCA GTACATTTGCGGATTGGGGATGAAATGCTGCACCAGACAGATGCATTGTT CTTCGAAAATTTGAAGAAGGGTGTGGGTACGGCGCTGGTGGGGTTTGACT GCATGCACTATCACTTTTTCTACGAGGAAGATGCGATTATCGAGTTGGAA AAGGCCACGGAGGAGAAAAGGAATGCAGAAATCTTCAAACAGGAGCACAA AGCGAAACTTCAAAAGGAGAAGGAAAAGAAGGAGGCGGTTGCGGCACAAG GAGAGAAGCAAGAACAGGATGAGGAGAAGAATAATAAGGACGAAAAGTTG GAGGAGGTGGTGGTGGTAGAAAGAGAAGGGGACGAGCAGATTGAAGAGGA GTCGACTGCGAAAATAACGGACGAGGAGGAGGTAGAGGACAAGGAGATGG TGGTGCTAGAAAAGAACAAGGAAGAGCAGGTTGAAGAGGCGGAGGTGGTC GTGAAGAAGGGGGAAAGAATAAATAAGAGTAGATCGGTGGGTCAGGGGGC ACCATTTCCCATTTTAACGGATATTTTCAGGGAGGAGATAGCCATAGTAG AGGAATCAGTGGTGAACAGAGTGAAGAAGGAGAAGGAAAGTAGGCAAGAA GGGAGGGAAGAGGAGGGGCTGAGAAAAGAAGGAGAGGAGGAGAGTGGGAT CGAAGGGGCAATGGGAATTGCCAATAATACTTATCAAACCAGGTAGGTTT GCCTTCCCTCCCTATCTCGCTTCATCCCTGCGCGTCCCCCATATTCCATG CCCCCTTCGACTCCATCCTTACTGTTGCTAATTGGATGAAACATGTGGCT GGCCCTTATCGGAGAACCATGGCATTTCATGTAATCTTGTCAACACCAGA TGATTTCTCTTCCCCCTCCCCTCCCTTCTGTCCTCGCTCCCTCCCTCATC TTTCCAACAGGACAATACGAAAACAACGTATCCGGGTATCCTACCACGGC AGAATGGATGTCCGCAGCACCCTCTACCACTTCATGGATGCGGACATGTT GGTTTTGACAGGTTCTTCATTCCCTTACATGGCAGCGCTGGTCACCCCAA AGCCCGTCATTCTGATGGCCCAGCCAAAGGAGGCATCACGACAAGGGCCA CGGGGTGAAGGGACTGTGGGGGGCACATGGTTCGGAGGGTACGGAATCGG AGGGAGAACCGGAGGTATTGCCCTGCTGTCGGAGCAAGGGAACGTGATCA GCCCGGAGACGGACACGGAGTGGAGAGCAATGGTCGAGATGAAATATTTG GATTCGGCGGGGCGAAGGGTGCCGTACGTGTAGAAATAGAAATAGAAAAA AATATAAAAAAGAAATGAGAAATTAAGAAATAGGGGTAGGGAGTAGGTAG GAAGAGGAAATTTGACGGGACTCGTGGTCAAAACGTAAATTGTGAGATTT TATGTTCGGTATGGAAATGACATTACAATAATAAATAAATAAATAATTAA TGCTGACG
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Coding sequence (CDS) from alignment at chr8:1124908..1127665-

>NO08G04010.2 ID=NO08G04010.2|Name=NO08G04010.2|organism=Nannochloropsis oceanica|type=CDS|length=1698bp|location=Sequence derived from alignment at chr8:1124908..1127665- (Nannochloropsis oceanica)
ATGTCGGAAGTAGTACGGCTTCCCGTGCTGGCCGATTCGACTTCTTCGCC
TGTCACAATGGCTACCACTGCCCGTCGTGGCCCCTACCTCCTGATACCAC
TCTTGGCGATTCTTGCCTTCTACAGCACTAATTTTGTCTTTGTGTGGAAT
CAGCAACAACCGAGAGGCAACTTCCTATCCGGTCTCAACTTCACGTCGTC
CCTTTCCCACCTCCATTTGTCCTCCAATGCTTCCTCTTCCGGCCCTGCAC
TTTTCCCCTCTTCTTCCTCTGCGTCTGCTTACGCCTCATTCCCTGCTTCT
TCCTCTCAGTCAGCTCCTGTCTCTCTCCCTGCTACTTCCTCCCTACCCTC
CTCCCTCATATCCTCCTCCTTTCATCCCACGTGTGACTACCCGCTCACTG
AAGTAGACCCTTCCTGCCCCCGCTTCACCAACATCAATCTCATCGCAAAA
AGGGGCCTTGGAGATCGCTTCCTTCAACTTGCTATTGTCATTCTTGTGGC
TCTTGACACCGACAGTGTCCCCCTCCTTCTGGACATGCACACCGTGAATG
GCAAACATGGGAACTACACGGGTCTGGAAGACTTCCTCCCCTTCGCCTCT
TCGCTTCCCAGGCTAGAGGATGTAATAGAGCACTATCCAACCCTGCGCCG
AATTAATGCTGACCACCCAGGGAGCTACCGTGATAAGATCACCTGGCTGA
AGGCAGGAGGTAAACTGCAGGAGGGCGGGAAGGAGGGAGGAGAGACAGGG
TGCAACCTTCTCATGACCATTGACATGGACGTGTGCGGTGACTTCCGCGA
GGAAAGTTGTTACTTCCTTGGAGAGCCACAGTATACCCGAATCAGGGACC
TAGTCCGCTGTTGGATGCTTAAATTGAGGCCCGAGGCCATTCCTAGGTTG
GTGTGGAGTGACGCACAAGAGGACGGAAAGGAGGGCGGGGTACGGCAAGA
GCAGCAGCAGCAGCAGGAGGAGGAGGAGGAGCAGCAGTGTTATAATGTGG
CAGTACATTTGCGGATTGGGGATGAAATGCTGCACCAGACAGATGCATTG
TTCTTCGAAAATTTGAAGAAGGGTGTGGGTACGGCGCTGGTGGGGTTTGA
CTGCATGCACTATCACTTTTTCTACGAGGAAGATGCGATTATCGAGTTGG
AAAAGGCCACGGAGGAGAAAAGGAATGCAGAAATCTTCAAACAGGAGCAC
AAAGCGAAACTTCAAAAGGAGAAGGAAAAGAAGGAGGCGGTTGCGGCACA
AGGAGAGAAGCAAGAACAGGATGAGGAGAAGAATAATAAGGACGAAAAGT
TGGAGGAGGTGGTGGTGGTAGAAAGAGAAGGGGACGAGCAGATTGAAGAG
GAGTCGACTGCGAAAATAACGGACGAGGAGGAGGTAGAGGACAAGGAGAT
GGTGGTGCTAGAAAAGAACAAGGAAGAGCAGGTTGAAGAGGCGGAGGTGG
TCGTGAAGAAGGGGGAAAGAATAAATAAGAGTAGATCGGTGGGTCAGGGG
GCACCATTTCCCATTTTAACGGATATTTTCAGGGAGGAGATAGCCATAGT
AGAGGAATCAGTGGTGAACAGAGTGAAGAAGGAGAAGGAAAGTAGGCAAG
AAGGGAGGGAAGAGGAGGGGCTGAGAAAAGAAGGAGAGGAGGAGAGTGGG
ATCGAAGGGGCAATGGGAATTGCCAATAATACTTATCAAACCAGGTAG
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Synonyms
Publications