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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr8 | genome | chr8:1118640..1120378 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO08G03980.1 ID=NO08G03980.1|Name=NO08G03980.1|organism=Nannochloropsis oceanica|type=mRNA|length=1412bp
TGAAACCGGAGACCTTCACCCTCTGCTTCAATTTCCGTCTCAAATCATTC
GCCTTTGCACGGCTAGCCGTGCGCTGCATTTCATACCTGCCGTCCAGTGA
TATGGTCCACGACATAACCATACGCCTAAGACAATCACCTATATGAGGCT
AGCCAGAAGCGGGGGGGTACTTTGTGCCACTCTGGTTTTTGCCTCCGCTA
CATCCAGAGCTCTCGAGCATCCCGTACATCCCTATTTCCATCAGACCATC
ACAGCCAGCGGCAGTAGGAGCTCGTCGTCGCGAAAAAAAATATCTTGGTG
TAAGGTATTACAGAGATTAATCTCTTCATGGAATTTTAAAGCTTGTGCTA
ATCAGCTACGACGTAAACATGCAGGCACCGCCCACCTCTCTCCAACACCA
TCTCATCACCTCATCTTCCCTCCCCCAACCAGGAGGCTTTGAGATAATGG
ACCGTGACAATCCCACAGCGATTGTATGCAAGCGTCTTGAAGCACTTGGT
GGACAAGGGAAAATTCTCGCCGAGGCTGTAGTCGTGATAATACACGAAGC
ACCAGATATTGCAGAGAAACTTTTCTCAGTCCCAAGGAAAGACAGAGAAT
ATATTCCCAACCTTCTGGCACAATATGACCGCGGTGGTCATACCTTGCTA
TGGTACTCTTTACATAAAGGGCAGATCGATTTTGCCGATATGTTTCTTGG
GCTCTGCGGCGAAAAAGAACTCCTGAAAAAGACAATGGCTGGGCAATCCT
TGCTTATGGCGGCCGTTGACGGAGACCAAGCAGAGGCAGCAACCTGGCTA
TTGCGCCAATGGGCGGCACATTTCGGTCTTTCTCGCATGTATCTATTGAT
GGAGGAAGAGAGTCTCGCGGGGTATTCAGCCCTGTGGTGGTGTGGGATGG
ACGGGCGCGAATCGGCGGCTAGAGCGTTGTTGGCGTGCGGAGCGGACGAC
CACCGCCTGGATCGGAACAACGTCTCTTGTGTGGAGATTGCCCGACATCG
GCAGCAGATTGGCATGCTAGCCATGTATGAGGAAGCGGAGCGAGCATACT
TTTTGACCAAAATGCGGCAGTTGACCGAAATGGGCCGGGCTGTGGGACCA
GAGGTAGAGAGAAATGAGCACGGGGAGGAAAAGAATACAGAAGATGGCAG
CGGCGGTGAAATGAAATTCAAGGGAGTCACAGCATTTGTTATGCAATATC
TGACTTCAGACCTGGCAATGGAGCTGGGGCTGTGGATGCGATAGATTGAA
GCGAGAAGCTTCACAAGGGTGTATTTCATACGACACGATGGGTGGAATGT
AAACAGGAAAGAGCGCGGAAATTGTCTTTGTATAGGAAGTAGTAGAACAT
AGATCGCGCATAGAGACAAGAGAATAGAGGAAGGGACAATGTAAATGACT
GTATTAAAACAC back to topprotein sequence of NO08G03980.1 >NO08G03980.1-protein ID=NO08G03980.1-protein|Name=NO08G03980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bp
MQAPPTSLQHHLITSSSLPQPGGFEIMDRDNPTAIVCKRLEALGGQGKIL
AEAVVVIIHEAPDIAEKLFSVPRKDREYIPNLLAQYDRGGHTLLWYSLHK
GQIDFADMFLGLCGEKELLKKTMAGQSLLMAAVDGDQAEAATWLLRQWAA
HFGLSRMYLLMEEESLAGYSALWWCGMDGRESAARALLACGADDHRLDRN
NVSCVEIARHRQQIGMLAMYEEAERAYFLTKMRQLTEMGRAVGPEVERNE
HGEEKNTEDGSGGEMKFKGVTAFVMQYLTSDLAMELGLWMR* back to topmRNA from alignment at chr8:1118640..1120378+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO08G03980.1 ID=NO08G03980.1|Name=NO08G03980.1|organism=Nannochloropsis oceanica|type=mRNA|length=1739bp|location=Sequence derived from alignment at chr8:1118640..1120378+ (Nannochloropsis oceanica)
TGAAACCGGAGACCTTCACCCTCTGCTTCAATTTCCGTCTCAAATCATTC
GCCTTTGCACGGCTAGCCGTGCGCTGCATTTCATACCTGCCGTCCAGTGA
TATGGTCCACGACATAACCATACGCCTAAGACAATCACCTATATGAGGCT
AGCCAGAAGCGGGGGGGTACTTTGTGCCACTCTGGTTTTTGCCTCCGCTA
CATCCAGAGCTCTCGAGCATCCCGTACATCCCTATTTCCATCAGACCATC
ACAGCCAGCGGCAGTAGGAGCTCGTCGTCGCGAAAAAAAATATCTTGGTG
TAAGGTATTACAGAGATTAATCTCTTCATGGAATTTTAAAGCTTGTGCTA
ATCAGCTACGACGTAAACATGCAGGCACCGCCCACCTCTCTCCAACACCA
TCTCATCACCTCATCTTCCCTCCCCCAACCAGGAGGCTTTGAGATAATGG
ACCGTGACAATCCCACAGCGATTGTATGCAAGCGTCTTGAAGCACTTGGT
GGACAAGGGAAAATTCTCGCCGAGGCTGTAGTCGTGATAATACACGAAGC
ACCAGATATTGCAGAGAAACTTTTCTCAGTCCCAAGGAAAGACAGAGAAT
ATATTCCCAACCTTCTGGCACAATATGACCGCGGTGGTCATACCTTGCTA
TGGTACTCTTTACATAAAGGGCAGATCGATTTTGCCGATATGTTTCTTGG
GCTCTGCGGCGAAAAAGAACTCCTGAAAAAGACAATGGCTGGGCAATCCT
TGCTTATGGTAAGTACCTCGATGCGCATCTTGAGCAGAAGAGGAAGAGCG
CATTGGGTTTGTAGAGAGACGAGCGCAAACACAAAGCATACAAATATTTT
TGTAGTTTGATTCCCATTGCCTCCTTTCTTGGTTATAATCCGGGCAAGCA
TTACGCGAACTTACCGAAATGACGATCAGGCGGCTGGACATTAATTTGTT
ATCGAACTTTCCATTCTGCCCCTATTCCCCGCATGTACATCTGTTGATGA
GTATTCTCGAAAATCCAGAGGTACAAGTGTGCGTCTTCACAACCGCATAG
ATACAGAGCTTCACCTACATGCGCACCCTCAACAGGCGGCCGTTGACGGA
GACCAAGCAGAGGCAGCAACCTGGCTATTGCGCCAATGGGCGGCACATTT
CGGTCTTTCTCGCATGTATCTATTGATGGAGGAAGAGAGTCTCGCGGGGT
ATTCAGCCCTGTGGTGGTGTGGGATGGACGGGCGCGAATCGGCGGCTAGA
GCGTTGTTGGCGTGCGGAGCGGACGACCACCGCCTGGATCGGAACAACGT
CTCTTGTGTGGAGATTGCCCGACATCGGCAGCAGATTGGCATGCTAGCCA
TGTATGAGGAAGCGGAGCGAGCATACTTTTTGACCAAAATGCGGCAGTTG
ACCGAAATGGGCCGGGCTGTGGGACCAGAGGTAGAGAGAAATGAGCACGG
GGAGGAAAAGAATACAGAAGATGGCAGCGGCGGTGAAATGAAATTCAAGG
GAGTCACAGCATTTGTTATGCAATATCTGACTTCAGACCTGGCAATGGAG
CTGGGGCTGTGGATGCGATAGATTGAAGCGAGAAGCTTCACAAGGGTGTA
TTTCATACGACACGATGGGTGGAATGTAAACAGGAAAGAGCGCGGAAATT
GTCTTTGTATAGGAAGTAGTAGAACATAGATCGCGCATAGAGACAAGAGA
ATAGAGGAAGGGACAATGTAAATGACTGTATTAAAACAC back to topCoding sequence (CDS) from alignment at chr8:1118640..1120378+ >NO08G03980.1 ID=NO08G03980.1|Name=NO08G03980.1|organism=Nannochloropsis oceanica|type=CDS|length=876bp|location=Sequence derived from alignment at chr8:1118640..1120378+ (Nannochloropsis oceanica)
ATGCAGGCACCGCCCACCTCTCTCCAACACCATCTCATCACCTCATCTTC
CCTCCCCCAACCAGGAGGCTTTGAGATAATGGACCGTGACAATCCCACAG
CGATTGTATGCAAGCGTCTTGAAGCACTTGGTGGACAAGGGAAAATTCTC
GCCGAGGCTGTAGTCGTGATAATACACGAAGCACCAGATATTGCAGAGAA
ACTTTTCTCAGTCCCAAGGAAAGACAGAGAATATATTCCCAACCTTCTGG
CACAATATGACCGCGGTGGTCATACCTTGCTATGGTACTCTTTACATAAA
GGGCAGATCGATTTTGCCGATATGTTTCTTGGGCTCTGCGGCGAAAAAGA
ACTCCTGAAAAAGACAATGGCTGGGCAATCCTTGCTTATGGCGGCCGTTG
ACGGAGACCAAGCAGAGGCAGCAACCTGGCTATTGCGCCAATGGGCGGCA
CATTTCGGTCTTTCTCGCATGTATCTATTGATGGAGGAAGAGAGTCTCGC
GGGGTATTCAGCCCTGTGGTGGTGTGGGATGGACGGGCGCGAATCGGCGG
CTAGAGCGTTGTTGGCGTGCGGAGCGGACGACCACCGCCTGGATCGGAAC
AACGTCTCTTGTGTGGAGATTGCCCGACATCGGCAGCAGATTGGCATGCT
AGCCATGTATGAGGAAGCGGAGCGAGCATACTTTTTGACCAAAATGCGGC
AGTTGACCGAAATGGGCCGGGCTGTGGGACCAGAGGTAGAGAGAAATGAG
CACGGGGAGGAAAAGAATACAGAAGATGGCAGCGGCGGTGAAATGAAATT
CAAGGGAGTCACAGCATTTGTTATGCAATATCTGACTTCAGACCTGGCAA
TGGAGCTGGGGCTGTGGATGCGATAG back to top
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