NO08G03340.1, NO08G03340.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO08G03340.1
Unique Name	NO08G03340.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4886
Alignment location	chr8:918648..923533 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr8	genome	chr8:918648..923533 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO08G03340.1 vs.
Match: EWM26838.1 (hypothetical protein Naga_100018g20 [Nannochloropsis gaditana])

HSP 1 Score: 656.0 bits (1691), Expect = 1.500e-184
Identity = 416/821 (50.67%), Postives = 519/821 (63.22%), Query Frame = 0

Query:    1 MPPQQDTGWLSPSATPESISRSNSEGLHETKMETMVWNLLKDELHQQQAAASRSIPNTAL-GPSSHLSPGSSDG-CYHPQVAGGSPIA-----AADPILSPVPPPSNEALQLMARLCLEHVLGRPESMARRTELGIVLRDALGPAYQKGWVNMALAELERKGHGLLTPDGVFFRASIPLLNAMTKIRMQNKGVVAAAANITTSAGSSSSSSSNSSNSSNNNSSFSSRRGKRGFFLIDGGYYEWLQWHILQGRIATHAIDVRLLVQRLENMLGLSFVRRLYVQSTETGALGNFHKMLEATAGFEVELHRLRDSPSLPSHRGVGVAMTAHVLSSTFKADFGALVVLTGGASDLVPAFRMARAENDSRYRMRQRVQEVVVLGGTHISPAFFPYLYRPVDGSAFIFESLMAACVVPKSELGRGTGSLSISSSSYLSLRRKARSLSPPMARSGQSKRGLE---NSISSPPL----PSSEAPAEGFPVYSPSFQQLDNRNPTAYSMGRLAGSPRHSATTSDVSLNLSLSNSNSSGSGS--GSCGSSVSVGVAGVGG-----------------RPRRWCNFGHRCKYFEDVETNFVHFQRFAHVCQHDTQCPFVLNYAVHRSTEEGRAHFLMWKHSCPHGLDCQYFAQPDKHRRHIEFFTHKAKVLNAAAAAVAQQQ----------QQQQQQQQQQQQAQQQQQAHQRQRLVLQDHHLAALSLSPPASPLHAMAPRTPLSLPASLNETESLLSRFAGDWDPEMVSQMLQQHNQQQSHYHHHQQQILIPRPPRLHTQHSSTLTHSSTSSDTQNYPLLVSGSSGVEDE 779
            M PQ   GW  PS   E +SRSNSEG+HET METMVWNLLKD+ HQ  +++  +  ++A   P     PG +D    +   A GSP+A      AD   + VP PS E L+LM+RLCLE VLGR +  ARRTELGI LRD LG AYQKGWVN ALAELERKGHG L+ DGVFF+A+ PL+NA+  +R  N+G            G+  +  S++     +  S SSR  KRGF LIDGGYYEWLQWH+LQG+ +THAIDVRLLVQ LEN+L ++F+RRLYVQST+TG  G+FHKMLEATAGFEVE+HRL+D P+    R  G+AMT  +L STFKA F ALVVL G  SD+ PAFRMA+AEN+SR+R RQ++Q V+ LGG+ +SP   PY+YRP  GS F+FE+LMAAC+VPK+EL R        S   +S  R ARSLSPPMAR   + +  E   +S+ +PP+     S+ + +E F +++     L  ++       RL   P H A  SD+   L LSNS+SSGSGS  GS G ++ + ++G G                  RPRRWCNFGHRCKYFEDVE N VHF RFAHVC  D  CPF+ NYAVHR +EEG+AHF MWKHSCPHGL+CQYFAQPDK+RRHIEFFTHKAKVLNAAAAAVA QQ          QQ  ++Q  +QQ    QQ H     ++    + ++ +   AS     +  +   +  +  E ES+LS F GD DP MV+QM+ QH QQQ     H +Q L   P     Q  S  T  S SS +Q   L +   S V+ E
Sbjct:    1 MAPQDGKGW--PSVALEKMSRSNSEGIHETNMETMVWNLLKDDKHQHLSSSPAASSSSATYSPCLLPPPGLTDSESEYMSSAHGSPVAQHNLFGADSA-TMVPSPSGEVLELMSRLCLERVLGRADGTARRTELGIALRDTLGTAYQKGWVNTALAELERKGHGRLSSDGVFFKAASPLMNAVANMRTHNRGTATGRPGSAACRGTGRALFSDA-----HAGSTSSRGRKRGFLLIDGGYYEWLQWHVLQGKASTHAIDVRLLVQSLENVLNVNFIRRLYVQSTKTGVRGSFHKMLEATAGFEVEIHRLQDLPATHPQRNTGIAMTDQILGSTFKAAFDALVVLAGAGSDVAPAFRMAQAENESRFRSRQQMQHVMALGGSRMSPDLLPYMYRPPAGSLFMFENLMAACMVPKTELNR-------LSEHAISPHRNARSLSPPMARGSTADKKFESFSSSLFAPPVGDLRTSTRSVSESF-IHAGEPLGLPLQDAQ-----RLDIDPCHGAGVSDIGFGLCLSNSSSSGSGSGGGSVGGNIGISLSGSGSGSGTVAGNSFPGEVNSTRPRRWCNFGHRCKYFEDVEANAVHFHRFAHVCPDDLLCPFIQNYAVHRLSEEGKAHFAMWKHSCPHGLECQYFAQPDKNRRHIEFFTHKAKVLNAAAAAVAHQQEHFSPGHVAYQQVGKEQMVRQQPYGSQQCHDTHHRLVPKIPITSI-VPMDASVTSGQSLLSQAQVYKTAFERESILSNFIGDCDPVMVNQMI-QHQQQQ-----HTEQQLASIPSSFLQQRYSPPTRPSWSSPSQ---LALDEKSDVDSE 790

The following BLAST results are available for this feature:

BLAST of NO08G03340.1 vs.

BLAST of NO08G03340.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM26838.1	1.500e-184	50.67	hypothetical protein Naga_100018g20 [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO08G03340	NO08G03340	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO08G03340.1	NO08G03340.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO08G03340.1.cds1	NO08G03340.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr8:918648..923533-
coding sequence from alignment at chr8:918648..923533-

mRNA sequence

>NO08G03340.1 ID=NO08G03340.1|Name=NO08G03340.1|organism=Nannochloropsis oceanica|type=mRNA|length=4886bp
TCTCTGTTGTATTCGTGGGTATGTTTTCTGCATGCCCCCATCCGTATTTC
GTTTCCAGTATATCTCTACCCCCTACAGCGGATTCGACACTCGTTGGTTC
GGCTCCCAGATAAATGACACTTTCTGCCCATGCGGAGAACATGGAGAGGT
ATTACTACTAACATTTCATGTCGTATACAGGGGGCGATACTATCAGGTGC
AACATGGGCCCGCCGGCGACTTCTGCTGGCCCACGTGGCCAAGGGATCCC
GCAGTTACACATGCAACAAAGCAGCAATATTCCAACAGAAAGCACCGCCG
GAGAAAAAATCTGCATCGAAATAATATATCGTTCTTTAACCCCCACAAAA
GCCAATCAGCCTCTCAATCAGGCCAGGGGACCTCCTGTCAGCCGCGAGCG
TGAGGCGTGTTTGCTTGGTGACGGCAGAAGATAAATACTCCTGCTTGGTG
TTTGGCTCTTTCGCATCCACATCAATTTACTTTTCCCAGTGTGTATATAC
ACACTCTTCTTCGTACGAATGGACTATATCCATTAATTTAACCCTCCGAT
GGTCAACCTCTGTCAGCCCTCAGAACCTACCTCTTCATGTTCTTCGGGTC
CACAAAAACTTTAATAAAATTTCGGAATGGTGATCGGGGATGGACGGATG
GATGCTCTTCCTTCTGCCGAGGCTTGCACTTGATCGCATCGACAGAACCC
CAGCACAAGTACCCACGCCTACCCATCCCGCGGCAACTCAGACTCTGCTC
TCAGACCACGAATCACATTAATCACACCCTTTCAATCCACTAAGCACCCC
TTCGAAGGAGCGGGGGAAGAGGGGGGTCTATCGGGGGTTGGCAACGGCTG
AAAATTTGTTCAAATCAAGTCTCGAAATAACACGGGCTAGAAAATGTTGT
GATGTATTGCATATGCTTTTTTAATCCTTCTTGTGTCGCACAGGCATTTA
TATTGTAGATCTGGAATATTGTCACTGACCAGATACGCTTGGCGTACACA
CGACTTTACGCTGTCCTGTTACCCAGGGCCTCCCCCCACCACATCGACGA
AGGGCCTGCTCCTTGCCCTCTACCCTTAGCTGCTTCACGCAAAAATTTGT
CGGATAAAGGGGAGTGAAAATAAAATTAGCAGGTCAATTTCATGTCCTGA
AGAAGCGGACTAGCAGTTCCTCGTGTGCGTGATTCCGAGTCGTGTGCACG
GACGGACACCGTGGCGCACCACATGTTGCCTGCCAACATCATCGGTCGCA
TTGCTGTACATGCAATTTAACATGCCCTGATATGACATAACATTGGGAAC
ATGTGACTTGAGACTAATATTGGACCGGACTACTGCGTATGCCCTCATCA
TGCGTGCCCGGGATCCGGTAACTTTATCTGCTTTATTGGCCCACTCACCA
ATTGCTTGTCTCTCCCCAGCCCCCACGCACTCAGGCGACTCCACCACACG
ATTTTCCTCCCGACCGATCCATCAAGTGCTACGTCTGTCGACAGGAATCT
GCTGTTTATCACGGCGACAGGTGCCATAGAGGTCTTACTTTCGCAGGCGA
TCGCTGGTCCTGCCTGCAAATTAATCCTGGAGCAAAGGCGACGACGCGAC
GACAACGACAGCGATAAGTGCCTTCTAAGCCCGCAGACAGTTGCCGCCGC
CGCACTGGCTAGAGGCAATAGGATGCCACCTCAGCAAGACACAGGGTGGC
TTTCCCCTTCCGCCACACCAGAAAGCATCAGCAGAAGCAACAGCGAAGGC
CTCCATGAGACGAAGATGGAGACCATGGTGTGGAACTTGCTCAAGGACGA
GCTGCACCAGCAGCAAGCAGCAGCCAGCCGCAGCATCCCCAACACAGCAC
TTGGTCCTTCCTCTCACCTTTCTCCCGGCTCCAGTGATGGATGCTACCAC
CCTCAGGTGGCCGGCGGCAGTCCCATCGCAGCAGCAGACCCTATCCTGTC
ACCGGTGCCTCCCCCCAGCAACGAAGCCTTGCAGCTGATGGCCCGCCTGT
GCTTGGAACATGTTCTAGGCCGTCCGGAAAGCATGGCTCGTCGTACAGAG
CTGGGTATTGTCTTGCGGGATGCCCTAGGCCCCGCTTACCAGAAGGGGTG
GGTGAACATGGCGCTGGCTGAGCTGGAACGGAAAGGGCACGGGCTGCTCA
CGCCCGACGGGGTTTTCTTCAGGGCATCAATCCCTTTGCTGAATGCTATG
ACTAAGATACGAATGCAGAATAAAGGGGTTGTGGCGGCGGCTGCCAATAT
TACCACCAGTGCAGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAACA
GCAGCAACAACAACAGCAGTTTTAGCAGCAGACGGGGGAAGCGAGGCTTC
TTCCTTATTGATGGTGGCTATTACGAGTGGCTGCAGTGGCACATTCTTCA
AGGCCGCATCGCCACGCACGCGATCGACGTCCGTCTGTTAGTGCAGCGCC
TGGAAAATATGCTGGGTTTGTCCTTTGTCCGGCGGCTCTACGTCCAGAGC
ACCGAGACGGGCGCCCTTGGGAATTTCCACAAAATGCTTGAGGCAACTGC
GGGATTCGAGGTTGAACTACATCGTCTAAGAGACTCACCCTCTTTGCCAT
CACATCGTGGCGTAGGCGTGGCGATGACAGCCCACGTGTTGAGCTCGACT
TTTAAAGCTGATTTTGGTGCACTGGTGGTGCTGACAGGAGGGGCTTCGGA
TCTTGTTCCAGCTTTTCGGATGGCACGAGCGGAGAACGATAGTCGCTACC
GTATGCGGCAACGGGTGCAGGAAGTGGTGGTTTTGGGCGGAACCCATATC
AGCCCCGCCTTTTTTCCTTATCTTTATCGGCCTGTGGACGGGTCGGCATT
CATTTTCGAGAGCCTCATGGCCGCGTGCGTTGTGCCCAAGAGTGAGTTGG
GGCGTGGGACGGGCAGTCTTTCAATCTCTTCGTCGTCCTACCTCTCCCTG
AGGCGCAAAGCCCGCTCACTCTCGCCGCCTATGGCCCGCTCAGGACAGTC
CAAGAGGGGCCTTGAAAACAGTATTTCTTCTCCACCTCTTCCTTCTTCTG
AAGCACCCGCCGAGGGCTTTCCGGTTTACTCCCCCTCTTTTCAGCAACTA
GATAATCGCAACCCTACGGCGTACAGTATGGGCAGACTTGCGGGTAGCCC
TCGCCATTCTGCGACCACGAGTGACGTAAGTCTCAATCTGAGCCTGAGCA
ACAGCAACAGCAGCGGTAGCGGTAGTGGGAGTTGTGGCAGCAGCGTTAGC
GTTGGCGTTGCGGGTGTTGGGGGTCGTCCTCGGCGATGGTGCAATTTTGG
GCATCGCTGCAAATATTTTGAGGATGTAGAGACTAATTTCGTGCATTTTC
AGCGCTTTGCACACGTGTGCCAGCATGACACTCAGTGCCCTTTCGTTCTG
AACTATGCCGTGCACCGGTCGACAGAGGAAGGGAGGGCGCATTTTCTCAT
GTGGAAGCACTCGTGTCCGCATGGCTTGGATTGCCAGTACTTCGCGCAGC
CTGACAAACACCGCCGACACATCGAGTTTTTTACACATAAGGCTAAGGTT
CTCAATGCGGCGGCCGCAGCCGTGGCTCAACAGCAACAGCAGCAGCAGCA
GCAACAACAACAACAACAACAGGCACAGCAGCAGCAGCAGGCGCACCAGC
GTCAGCGACTGGTGCTCCAGGACCACCATCTTGCCGCCTTGTCCCTTTCT
CCACCGGCCTCCCCCCTCCATGCCATGGCTCCTAGAACACCGCTATCCTT
GCCTGCCAGTCTGAATGAGACGGAGTCGTTGCTCAGCCGATTCGCCGGGG
ATTGGGACCCGGAGATGGTTTCCCAAATGCTACAACAGCATAATCAGCAG
CAGAGCCACTATCACCACCACCAACAGCAGATTCTGATTCCCCGACCGCC
TAGGCTGCACACACAACACTCCTCCACCCTCACCCACTCCTCCACTTCTT
CTGATACCCAGAACTACCCCCTGCTTGTTTCGGGTAGCTCGGGCGTGGAA
GACGAGGTGAGTAGCCAGAGTAGTTCTAGCGCGGCCACCAGCCCTTCGAT
GTCCCCAAATACTGGCACATCGAACTTCTGGTAGTATGGGCTGTGTGTGG
ATATATTATTCGTTTGGCTGATGATCTAGATAGTTAAGGAATGCTTTTGT
GGTAATTCCAGCCAGGAACAAGAACAAGGAATGGCGTGGGGGCCGGTTTA
TTGAATGGATTTTCAAACGAATTGACAGGAAGATGAGCGAGTATTTGTGG
TCATTTTGTAGATACGTCATAATAGGATTTTTAATATGATATGAACACTG
TGGTTTTGTTTCGTCCTTCGTGGTAGACTTCATTGAGACCTTGCGAGGAG
AAGCATACATCGCGAGGGAAAACTCAAAGCAATCTTCCTCACACCAAACA
AGGCTGCTTTGAAATTCACACGCATTCCGAATCGCAAATACGGACATAGA
AGAGAGGAAGGGAGGAAAGTAGCATTCTGGCTACATTACAAAATTTAGCA
TGACTCAAATTATCATAGGATAAAGATTGAGTCAAGCACATTACCTCAAA
CACAACACAATTCTTTCCCTTCAAAATGATGGAAAAGAAAATGCGTTATC
CAAAGTACGGTTTTACAAAAGAAGATAAACCTAACACAAGCATGACATAG
AGAGATGACGGCATGGTCCGCAAATGAAGCGTGTCCTCCACCTTCTTTCG
GTGTAATCCAATAAACATGAGAGAAACCTTTACTCCCAGGAGGAAAAAGT
CTGAGAAAGCTTTGATGTTTTTTCAGTCCCATGAGATTCCACCAGCTTTC
AAGCAAAGGTTGTCAGCACGTAGCAAAAAAGATGACATGAAGAACTGATA
TATAGCAAAAATTAAGAGAAAAATACGATACCAAAA

protein sequence of NO08G03340.1

>NO08G03340.1-protein ID=NO08G03340.1-protein|Name=NO08G03340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=804bp
MPPQQDTGWLSPSATPESISRSNSEGLHETKMETMVWNLLKDELHQQQAA
ASRSIPNTALGPSSHLSPGSSDGCYHPQVAGGSPIAAADPILSPVPPPSN
EALQLMARLCLEHVLGRPESMARRTELGIVLRDALGPAYQKGWVNMALAE
LERKGHGLLTPDGVFFRASIPLLNAMTKIRMQNKGVVAAAANITTSAGSS
SSSSSNSSNSSNNNSSFSSRRGKRGFFLIDGGYYEWLQWHILQGRIATHA
IDVRLLVQRLENMLGLSFVRRLYVQSTETGALGNFHKMLEATAGFEVELH
RLRDSPSLPSHRGVGVAMTAHVLSSTFKADFGALVVLTGGASDLVPAFRM
ARAENDSRYRMRQRVQEVVVLGGTHISPAFFPYLYRPVDGSAFIFESLMA
ACVVPKSELGRGTGSLSISSSSYLSLRRKARSLSPPMARSGQSKRGLENS
ISSPPLPSSEAPAEGFPVYSPSFQQLDNRNPTAYSMGRLAGSPRHSATTS
DVSLNLSLSNSNSSGSGSGSCGSSVSVGVAGVGGRPRRWCNFGHRCKYFE
DVETNFVHFQRFAHVCQHDTQCPFVLNYAVHRSTEEGRAHFLMWKHSCPH
GLDCQYFAQPDKHRRHIEFFTHKAKVLNAAAAAVAQQQQQQQQQQQQQQQ
AQQQQQAHQRQRLVLQDHHLAALSLSPPASPLHAMAPRTPLSLPASLNET
ESLLSRFAGDWDPEMVSQMLQQHNQQQSHYHHHQQQILIPRPPRLHTQHS
STLTHSSTSSDTQNYPLLVSGSSGVEDEVSSQSSSSAATSPSMSPNTGTS
NFW*

mRNA from alignment at chr8:918648..923533-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO08G03340.1 ID=NO08G03340.1|Name=NO08G03340.1|organism=Nannochloropsis oceanica|type=mRNA|length=4886bp|location=Sequence derived from alignment at chr8:918648..923533- (Nannochloropsis oceanica)
TCTCTGTTGTATTCGTGGGTATGTTTTCTGCATGCCCCCATCCGTATTTC
GTTTCCAGTATATCTCTACCCCCTACAGCGGATTCGACACTCGTTGGTTC
GGCTCCCAGATAAATGACACTTTCTGCCCATGCGGAGAACATGGAGAGGT
ATTACTACTAACATTTCATGTCGTATACAGGGGGCGATACTATCAGGTGC
AACATGGGCCCGCCGGCGACTTCTGCTGGCCCACGTGGCCAAGGGATCCC
GCAGTTACACATGCAACAAAGCAGCAATATTCCAACAGAAAGCACCGCCG
GAGAAAAAATCTGCATCGAAATAATATATCGTTCTTTAACCCCCACAAAA
GCCAATCAGCCTCTCAATCAGGCCAGGGGACCTCCTGTCAGCCGCGAGCG
TGAGGCGTGTTTGCTTGGTGACGGCAGAAGATAAATACTCCTGCTTGGTG
TTTGGCTCTTTCGCATCCACATCAATTTACTTTTCCCAGTGTGTATATAC
ACACTCTTCTTCGTACGAATGGACTATATCCATTAATTTAACCCTCCGAT
GGTCAACCTCTGTCAGCCCTCAGAACCTACCTCTTCATGTTCTTCGGGTC
CACAAAAACTTTAATAAAATTTCGGAATGGTGATCGGGGATGGACGGATG
GATGCTCTTCCTTCTGCCGAGGCTTGCACTTGATCGCATCGACAGAACCC
CAGCACAAGTACCCACGCCTACCCATCCCGCGGCAACTCAGACTCTGCTC
TCAGACCACGAATCACATTAATCACACCCTTTCAATCCACTAAGCACCCC
TTCGAAGGAGCGGGGGAAGAGGGGGGTCTATCGGGGGTTGGCAACGGCTG
AAAATTTGTTCAAATCAAGTCTCGAAATAACACGGGCTAGAAAATGTTGT
GATGTATTGCATATGCTTTTTTAATCCTTCTTGTGTCGCACAGGCATTTA
TATTGTAGATCTGGAATATTGTCACTGACCAGATACGCTTGGCGTACACA
CGACTTTACGCTGTCCTGTTACCCAGGGCCTCCCCCCACCACATCGACGA
AGGGCCTGCTCCTTGCCCTCTACCCTTAGCTGCTTCACGCAAAAATTTGT
CGGATAAAGGGGAGTGAAAATAAAATTAGCAGGTCAATTTCATGTCCTGA
AGAAGCGGACTAGCAGTTCCTCGTGTGCGTGATTCCGAGTCGTGTGCACG
GACGGACACCGTGGCGCACCACATGTTGCCTGCCAACATCATCGGTCGCA
TTGCTGTACATGCAATTTAACATGCCCTGATATGACATAACATTGGGAAC
ATGTGACTTGAGACTAATATTGGACCGGACTACTGCGTATGCCCTCATCA
TGCGTGCCCGGGATCCGGTAACTTTATCTGCTTTATTGGCCCACTCACCA
ATTGCTTGTCTCTCCCCAGCCCCCACGCACTCAGGCGACTCCACCACACG
ATTTTCCTCCCGACCGATCCATCAAGTGCTACGTCTGTCGACAGGAATCT
GCTGTTTATCACGGCGACAGGTGCCATAGAGGTCTTACTTTCGCAGGCGA
TCGCTGGTCCTGCCTGCAAATTAATCCTGGAGCAAAGGCGACGACGCGAC
GACAACGACAGCGATAAGTGCCTTCTAAGCCCGCAGACAGTTGCCGCCGC
CGCACTGGCTAGAGGCAATAGGATGCCACCTCAGCAAGACACAGGGTGGC
TTTCCCCTTCCGCCACACCAGAAAGCATCAGCAGAAGCAACAGCGAAGGC
CTCCATGAGACGAAGATGGAGACCATGGTGTGGAACTTGCTCAAGGACGA
GCTGCACCAGCAGCAAGCAGCAGCCAGCCGCAGCATCCCCAACACAGCAC
TTGGTCCTTCCTCTCACCTTTCTCCCGGCTCCAGTGATGGATGCTACCAC
CCTCAGGTGGCCGGCGGCAGTCCCATCGCAGCAGCAGACCCTATCCTGTC
ACCGGTGCCTCCCCCCAGCAACGAAGCCTTGCAGCTGATGGCCCGCCTGT
GCTTGGAACATGTTCTAGGCCGTCCGGAAAGCATGGCTCGTCGTACAGAG
CTGGGTATTGTCTTGCGGGATGCCCTAGGCCCCGCTTACCAGAAGGGGTG
GGTGAACATGGCGCTGGCTGAGCTGGAACGGAAAGGGCACGGGCTGCTCA
CGCCCGACGGGGTTTTCTTCAGGGCATCAATCCCTTTGCTGAATGCTATG
ACTAAGATACGAATGCAGAATAAAGGGGTTGTGGCGGCGGCTGCCAATAT
TACCACCAGTGCAGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAACA
GCAGCAACAACAACAGCAGTTTTAGCAGCAGACGGGGGAAGCGAGGCTTC
TTCCTTATTGATGGTGGCTATTACGAGTGGCTGCAGTGGCACATTCTTCA
AGGCCGCATCGCCACGCACGCGATCGACGTCCGTCTGTTAGTGCAGCGCC
TGGAAAATATGCTGGGTTTGTCCTTTGTCCGGCGGCTCTACGTCCAGAGC
ACCGAGACGGGCGCCCTTGGGAATTTCCACAAAATGCTTGAGGCAACTGC
GGGATTCGAGGTTGAACTACATCGTCTAAGAGACTCACCCTCTTTGCCAT
CACATCGTGGCGTAGGCGTGGCGATGACAGCCCACGTGTTGAGCTCGACT
TTTAAAGCTGATTTTGGTGCACTGGTGGTGCTGACAGGAGGGGCTTCGGA
TCTTGTTCCAGCTTTTCGGATGGCACGAGCGGAGAACGATAGTCGCTACC
GTATGCGGCAACGGGTGCAGGAAGTGGTGGTTTTGGGCGGAACCCATATC
AGCCCCGCCTTTTTTCCTTATCTTTATCGGCCTGTGGACGGGTCGGCATT
CATTTTCGAGAGCCTCATGGCCGCGTGCGTTGTGCCCAAGAGTGAGTTGG
GGCGTGGGACGGGCAGTCTTTCAATCTCTTCGTCGTCCTACCTCTCCCTG
AGGCGCAAAGCCCGCTCACTCTCGCCGCCTATGGCCCGCTCAGGACAGTC
CAAGAGGGGCCTTGAAAACAGTATTTCTTCTCCACCTCTTCCTTCTTCTG
AAGCACCCGCCGAGGGCTTTCCGGTTTACTCCCCCTCTTTTCAGCAACTA
GATAATCGCAACCCTACGGCGTACAGTATGGGCAGACTTGCGGGTAGCCC
TCGCCATTCTGCGACCACGAGTGACGTAAGTCTCAATCTGAGCCTGAGCA
ACAGCAACAGCAGCGGTAGCGGTAGTGGGAGTTGTGGCAGCAGCGTTAGC
GTTGGCGTTGCGGGTGTTGGGGGTCGTCCTCGGCGATGGTGCAATTTTGG
GCATCGCTGCAAATATTTTGAGGATGTAGAGACTAATTTCGTGCATTTTC
AGCGCTTTGCACACGTGTGCCAGCATGACACTCAGTGCCCTTTCGTTCTG
AACTATGCCGTGCACCGGTCGACAGAGGAAGGGAGGGCGCATTTTCTCAT
GTGGAAGCACTCGTGTCCGCATGGCTTGGATTGCCAGTACTTCGCGCAGC
CTGACAAACACCGCCGACACATCGAGTTTTTTACACATAAGGCTAAGGTT
CTCAATGCGGCGGCCGCAGCCGTGGCTCAACAGCAACAGCAGCAGCAGCA
GCAACAACAACAACAACAACAGGCACAGCAGCAGCAGCAGGCGCACCAGC
GTCAGCGACTGGTGCTCCAGGACCACCATCTTGCCGCCTTGTCCCTTTCT
CCACCGGCCTCCCCCCTCCATGCCATGGCTCCTAGAACACCGCTATCCTT
GCCTGCCAGTCTGAATGAGACGGAGTCGTTGCTCAGCCGATTCGCCGGGG
ATTGGGACCCGGAGATGGTTTCCCAAATGCTACAACAGCATAATCAGCAG
CAGAGCCACTATCACCACCACCAACAGCAGATTCTGATTCCCCGACCGCC
TAGGCTGCACACACAACACTCCTCCACCCTCACCCACTCCTCCACTTCTT
CTGATACCCAGAACTACCCCCTGCTTGTTTCGGGTAGCTCGGGCGTGGAA
GACGAGGTGAGTAGCCAGAGTAGTTCTAGCGCGGCCACCAGCCCTTCGAT
GTCCCCAAATACTGGCACATCGAACTTCTGGTAGTATGGGCTGTGTGTGG
ATATATTATTCGTTTGGCTGATGATCTAGATAGTTAAGGAATGCTTTTGT
GGTAATTCCAGCCAGGAACAAGAACAAGGAATGGCGTGGGGGCCGGTTTA
TTGAATGGATTTTCAAACGAATTGACAGGAAGATGAGCGAGTATTTGTGG
TCATTTTGTAGATACGTCATAATAGGATTTTTAATATGATATGAACACTG
TGGTTTTGTTTCGTCCTTCGTGGTAGACTTCATTGAGACCTTGCGAGGAG
AAGCATACATCGCGAGGGAAAACTCAAAGCAATCTTCCTCACACCAAACA
AGGCTGCTTTGAAATTCACACGCATTCCGAATCGCAAATACGGACATAGA
AGAGAGGAAGGGAGGAAAGTAGCATTCTGGCTACATTACAAAATTTAGCA
TGACTCAAATTATCATAGGATAAAGATTGAGTCAAGCACATTACCTCAAA
CACAACACAATTCTTTCCCTTCAAAATGATGGAAAAGAAAATGCGTTATC
CAAAGTACGGTTTTACAAAAGAAGATAAACCTAACACAAGCATGACATAG
AGAGATGACGGCATGGTCCGCAAATGAAGCGTGTCCTCCACCTTCTTTCG
GTGTAATCCAATAAACATGAGAGAAACCTTTACTCCCAGGAGGAAAAAGT
CTGAGAAAGCTTTGATGTTTTTTCAGTCCCATGAGATTCCACCAGCTTTC
AAGCAAAGGTTGTCAGCACGTAGCAAAAAAGATGACATGAAGAACTGATA
TATAGCAAAAATTAAGAGAAAAATACGATACCAAAA

Coding sequence (CDS) from alignment at chr8:918648..923533-

>NO08G03340.1 ID=NO08G03340.1|Name=NO08G03340.1|organism=Nannochloropsis oceanica|type=CDS|length=2412bp|location=Sequence derived from alignment at chr8:918648..923533- (Nannochloropsis oceanica)
ATGCCACCTCAGCAAGACACAGGGTGGCTTTCCCCTTCCGCCACACCAGA
AAGCATCAGCAGAAGCAACAGCGAAGGCCTCCATGAGACGAAGATGGAGA
CCATGGTGTGGAACTTGCTCAAGGACGAGCTGCACCAGCAGCAAGCAGCA
GCCAGCCGCAGCATCCCCAACACAGCACTTGGTCCTTCCTCTCACCTTTC
TCCCGGCTCCAGTGATGGATGCTACCACCCTCAGGTGGCCGGCGGCAGTC
CCATCGCAGCAGCAGACCCTATCCTGTCACCGGTGCCTCCCCCCAGCAAC
GAAGCCTTGCAGCTGATGGCCCGCCTGTGCTTGGAACATGTTCTAGGCCG
TCCGGAAAGCATGGCTCGTCGTACAGAGCTGGGTATTGTCTTGCGGGATG
CCCTAGGCCCCGCTTACCAGAAGGGGTGGGTGAACATGGCGCTGGCTGAG
CTGGAACGGAAAGGGCACGGGCTGCTCACGCCCGACGGGGTTTTCTTCAG
GGCATCAATCCCTTTGCTGAATGCTATGACTAAGATACGAATGCAGAATA
AAGGGGTTGTGGCGGCGGCTGCCAATATTACCACCAGTGCAGGCAGCAGC
AGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAACAACAACAGCAGTTT
TAGCAGCAGACGGGGGAAGCGAGGCTTCTTCCTTATTGATGGTGGCTATT
ACGAGTGGCTGCAGTGGCACATTCTTCAAGGCCGCATCGCCACGCACGCG
ATCGACGTCCGTCTGTTAGTGCAGCGCCTGGAAAATATGCTGGGTTTGTC
CTTTGTCCGGCGGCTCTACGTCCAGAGCACCGAGACGGGCGCCCTTGGGA
ATTTCCACAAAATGCTTGAGGCAACTGCGGGATTCGAGGTTGAACTACAT
CGTCTAAGAGACTCACCCTCTTTGCCATCACATCGTGGCGTAGGCGTGGC
GATGACAGCCCACGTGTTGAGCTCGACTTTTAAAGCTGATTTTGGTGCAC
TGGTGGTGCTGACAGGAGGGGCTTCGGATCTTGTTCCAGCTTTTCGGATG
GCACGAGCGGAGAACGATAGTCGCTACCGTATGCGGCAACGGGTGCAGGA
AGTGGTGGTTTTGGGCGGAACCCATATCAGCCCCGCCTTTTTTCCTTATC
TTTATCGGCCTGTGGACGGGTCGGCATTCATTTTCGAGAGCCTCATGGCC
GCGTGCGTTGTGCCCAAGAGTGAGTTGGGGCGTGGGACGGGCAGTCTTTC
AATCTCTTCGTCGTCCTACCTCTCCCTGAGGCGCAAAGCCCGCTCACTCT
CGCCGCCTATGGCCCGCTCAGGACAGTCCAAGAGGGGCCTTGAAAACAGT
ATTTCTTCTCCACCTCTTCCTTCTTCTGAAGCACCCGCCGAGGGCTTTCC
GGTTTACTCCCCCTCTTTTCAGCAACTAGATAATCGCAACCCTACGGCGT
ACAGTATGGGCAGACTTGCGGGTAGCCCTCGCCATTCTGCGACCACGAGT
GACGTAAGTCTCAATCTGAGCCTGAGCAACAGCAACAGCAGCGGTAGCGG
TAGTGGGAGTTGTGGCAGCAGCGTTAGCGTTGGCGTTGCGGGTGTTGGGG
GTCGTCCTCGGCGATGGTGCAATTTTGGGCATCGCTGCAAATATTTTGAG
GATGTAGAGACTAATTTCGTGCATTTTCAGCGCTTTGCACACGTGTGCCA
GCATGACACTCAGTGCCCTTTCGTTCTGAACTATGCCGTGCACCGGTCGA
CAGAGGAAGGGAGGGCGCATTTTCTCATGTGGAAGCACTCGTGTCCGCAT
GGCTTGGATTGCCAGTACTTCGCGCAGCCTGACAAACACCGCCGACACAT
CGAGTTTTTTACACATAAGGCTAAGGTTCTCAATGCGGCGGCCGCAGCCG
TGGCTCAACAGCAACAGCAGCAGCAGCAGCAACAACAACAACAACAACAG
GCACAGCAGCAGCAGCAGGCGCACCAGCGTCAGCGACTGGTGCTCCAGGA
CCACCATCTTGCCGCCTTGTCCCTTTCTCCACCGGCCTCCCCCCTCCATG
CCATGGCTCCTAGAACACCGCTATCCTTGCCTGCCAGTCTGAATGAGACG
GAGTCGTTGCTCAGCCGATTCGCCGGGGATTGGGACCCGGAGATGGTTTC
CCAAATGCTACAACAGCATAATCAGCAGCAGAGCCACTATCACCACCACC
AACAGCAGATTCTGATTCCCCGACCGCCTAGGCTGCACACACAACACTCC
TCCACCCTCACCCACTCCTCCACTTCTTCTGATACCCAGAACTACCCCCT
GCTTGTTTCGGGTAGCTCGGGCGTGGAAGACGAGGTGAGTAGCCAGAGTA
GTTCTAGCGCGGCCACCAGCCCTTCGATGTCCCCAAATACTGGCACATCG
AACTTCTGGTAG

Synonyms

Publications