NO08G03120.1, NO08G03120.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G03120.1
Unique NameNO08G03120.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2308
Alignment locationchr8:860890..863503 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:860890..863503 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO08G03120.1 vs.
Match: EWM26758.1 (mitogen-activated protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 703.7 bits (1815), Expect = 4.800e-199
Identity = 372/560 (66.43%), Postives = 432/560 (77.14%), Query Frame = 0
Query:   17 MTAKRRYFSLQHNHEGDMSPSTLTYWGSKEDMEANIPARGQLLLDADGRLQDLAPTGRRGFTITAMAQRKAWTMASESNNEEDAQRWQLALSAVLAKAVATAAVAAAVEEKKTIPESGTGGGLSQMEEENDSASNCSTSSSPRYTVQVSGQDFVLDKRYDNIRPLGHGAYGVVISAQDKSMGGEKVAIKKCPNVFADPLDAKRIAREIRLLRHFHHPNIVRLTDLPLPPSHDFTDVYMVTEQMDTDLHRVIYSGQKLTEEHVQFFLYQLLCGLKHIHSANVIHRDLKPSNILLNENCDLKICDFGLARDMSADTAATELPSNLTEYVVTRWYRAPEIMLSSQEYSKAIDVWASGCIFGEMLGRKPMFPGNDYIHQLKLITRTVGTPTSEDDLWFVKNPKAKVFMLSLPPSLPQDLSKRFPDVSPQALDLMSKMLQLDYQKRISVDAALEHPFFSSVREQAMEYVCPTAVPWGDVETSRLTRSNLQKMVLRDVSFFHQAAQDYLNIHRAQAMMRGGGGGGGGSRE--RGREGEREREADVARMIVVAGDGGVGRE-EVPVE 574
            MTAKRRYF L+H+  G    STL+YWGSK++ME  +PARG L+L AD R+Q+LA  GRRGFT+TA  QRKAW+MASE+N+ E+ +RWQ AL+A +AKA A         ++ TIPES T                 S     RY+V VSG +F+LD+RY+++RPLGHGAYGVV+SA D ++G +KVAIKKCPN+F DP DAKRIAREIRLLRHF HPNIV+LTDLP PP+ DF DVYMV E+MDTDLHRVIYSGQ LTEEH+QFF+YQL+CGLKHIHSANVIHRDLKPSNILLNENCDLKICDFGLARDM AD AATE  +NLTEYVVTRWYRAPEIMLSSQEYSKAIDVWA+GCIFGEMLGRKP+FPGNDYIHQLKLITR VGTPTSE DLWFVKNPKAKVFMLSLPPS PQDL+KR P    +ALDL+ +MLQLDY KRISVDAAL HPFF+SVR++AMEYVCPT VPWGD+E  + T  NLQ+ +  DV+ FH  A++ L    AQ    G  G G G RE    R+  R   ++  RM+  +   G G E E+ VE
Sbjct:    1 MTAKRRYFILEHDERGT---STLSYWGSKQEMENAVPARGLLVLGADSRIQELASIGRRGFTVTA--QRKAWSMASETNDPEEGKRWQAALTAAVAKAEAM--------KRNTIPESNTC---------------LSIYGENRYSVTVSGTEFLLDRRYEDLRPLGHGAYGVVVSALDLALG-QKVAIKKCPNIFEDPSDAKRIAREIRLLRHFQHPNIVKLTDLPPPPALDFFDVYMVAEKMDTDLHRVIYSGQTLTEEHIQFFMYQLMCGLKHIHSANVIHRDLKPSNILLNENCDLKICDFGLARDMGAD-AATEAANNLTEYVVTRWYRAPEIMLSSQEYSKAIDVWAAGCIFGEMLGRKPLFPGNDYIHQLKLITRIVGTPTSEADLWFVKNPKAKVFMLSLPPSPPQDLTKRLPGSGSEALDLLGRMLQLDYSKRISVDAALSHPFFASVRDEAMEYVCPTPVPWGDLEQCKPTCGNLQRAIWEDVAAFHPVAKESL---EAQRGFPGWEGHGPGVREVDSVRQSGRRALSEADRMLESSLAPGQGAELEMAVE 527          
The following BLAST results are available for this feature:
BLAST of NO08G03120.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26758.14.800e-19966.43mitogen-activated protein kinase [Nannochloropsis ... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03120NO08G03120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G03120.1NO08G03120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G03120.1.cds1NO08G03120.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G03120.1.cds2NO08G03120.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G03120.1.cds3NO08G03120.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G03120.1 ID=NO08G03120.1|Name=NO08G03120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2308bp
AACAACAGGACGGCAGGGCTAGAAAGGGCCACAGTATGGCACCCCTCACC
ATCCTGGAAGGGTATTTGCTGAAGCGGGGGCAAATGACGGCCAAGCGTCG
TTATTTTTCCTTGCAACACAACCACGAGGGCGACATGAGCCCGTCAACCC
TCACATATTGGGGTAGCAAGGAGGACATGGAGGCTAATATCCCTGCGCGT
GGTCAGCTCTTGTTGGATGCAGATGGACGGCTGCAGGATCTAGCTCCGAC
GGGTCGACGGGGTTTCACGATCACCGCGATGGCACAACGAAAGGCCTGGA
CCATGGCCTCTGAGAGCAACAACGAGGAGGACGCCCAGCGGTGGCAGTTG
GCGTTGTCAGCGGTACTGGCCAAAGCGGTAGCTACAGCAGCGGTAGCAGC
AGCTGTGGAGGAAAAGAAGACGATTCCGGAGTCAGGCACTGGTGGGGGGC
TGTCGCAGATGGAGGAAGAGAATGACAGTGCGAGTAATTGTAGCACCAGC
AGCAGTCCCCGGTATACGGTCCAAGTGTCCGGTCAGGATTTTGTGTTAGA
CAAGCGGTACGACAATATTCGTCCTCTGGGCCACGGGGCGTATGGTGTGG
TGATCTCCGCGCAGGACAAGTCGATGGGTGGCGAAAAAGTCGCCATCAAG
AAATGCCCCAACGTGTTCGCGGATCCCCTGGACGCCAAGCGGATCGCGCG
GGAGATCCGTTTGCTCCGTCATTTCCATCACCCCAATATCGTAAGACTCA
CAGACTTACCCTTGCCCCCCAGCCATGACTTTACGGATGTGTACATGGTT
ACGGAACAGATGGATACGGACTTGCACCGCGTAATTTATTCGGGCCAGAA
GCTGACTGAGGAGCACGTGCAGTTCTTCCTGTACCAGCTGCTGTGCGGCT
TGAAACACATTCACTCTGCGAATGTCATTCATCGGGACCTGAAGCCCTCC
AACATCCTTCTCAACGAGAACTGTGACCTGAAAATCTGTGACTTTGGCTT
GGCACGAGACATGAGTGCTGACACCGCTGCCACTGAGCTTCCTAGTAATT
TGACAGAGTATGTGGTGACGCGATGGTACCGCGCGCCGGAGATAATGCTT
TCGAGTCAAGAGTACAGTAAGGCTATCGACGTGTGGGCCTCCGGCTGCAT
CTTCGGCGAGATGCTGGGGCGCAAGCCCATGTTTCCTGGGAATGACTACA
TCCACCAGCTGAAGCTCATCACCCGTACGGTGGGCACCCCGACGTCAGAA
GACGACCTCTGGTTCGTCAAGAACCCCAAAGCCAAGGTCTTCATGCTTTC
CCTCCCTCCCTCCCTGCCCCAAGACCTCTCCAAACGCTTCCCTGACGTCA
GTCCTCAAGCCCTCGACTTGATGTCTAAAATGCTACAGCTTGATTACCAG
AAACGAATTTCTGTGGATGCCGCGTTGGAACATCCTTTTTTCTCCTCTGT
CCGCGAACAGGCCATGGAATATGTTTGTCCGACAGCGGTTCCTTGGGGTG
ACGTGGAGACATCTCGGTTGACGAGGAGTAACTTACAAAAAATGGTCTTG
AGAGACGTGTCGTTTTTTCACCAGGCCGCGCAGGATTACTTGAATATCCA
TCGGGCGCAGGCGATGATGAGGGGAGGGGGAGGGGGAGGAGGAGGGAGCC
GGGAGAGAGGGAGGGAGGGAGAGAGGGAGAGGGAGGCGGATGTTGCACGA
ATGATAGTGGTGGCGGGGGACGGTGGGGTAGGGAGGGAGGAGGTGCCGGT
GGAACAGCAGATAGCCTTTGCACCGATACCAACAGGCAGTGGTAGCAGCG
CTTACGGCGGTGGCGGTGGGGGGCAGCAGTGCCAACAACATTAAGTTCAA
CATCGGTAGTGACAGCAGGAATGACTTAGCACGGCGAGCAGTGAGAGCGA
GAGAGGGAACGCGGAGGAGGGGACAAGTAGGGGTCCGGGGCAGTGGTGGT
GGGTTCACCAGCAGTGAGTGGGAGATATAGTGAAGACTTGCTGTGGGAAG
AGTGCTGAGGGTTGCTGTAGCGTCCATGGTGACGGGGCTAGATATTTGTA
TGGAGAATGAAAGCTGTGGACTCTGACAGGGAGCTGTCGAAAGAATGGAA
ATGGGTAGGAGGGCGAGAAGAAAAGGGAATGTGTGTGTACCTGCAAATAA
AGGAATATGTACCAAATTAGCGAGCTGAAATGGACAAAATAAATGAAACA
AATTGCATAGTATTGTGGGGCACTGAAATAAAACAGGACAGGTAAGGTGG
GAGTAGACTACTCTATCCGTCACGCTATGAGGAAATGAAAAAAAATAACA
ATGAAGTG
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protein sequence of NO08G03120.1

>NO08G03120.1-protein ID=NO08G03120.1-protein|Name=NO08G03120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=603bp
MAPLTILEGYLLKRGQMTAKRRYFSLQHNHEGDMSPSTLTYWGSKEDMEA
NIPARGQLLLDADGRLQDLAPTGRRGFTITAMAQRKAWTMASESNNEEDA
QRWQLALSAVLAKAVATAAVAAAVEEKKTIPESGTGGGLSQMEEENDSAS
NCSTSSSPRYTVQVSGQDFVLDKRYDNIRPLGHGAYGVVISAQDKSMGGE
KVAIKKCPNVFADPLDAKRIAREIRLLRHFHHPNIVRLTDLPLPPSHDFT
DVYMVTEQMDTDLHRVIYSGQKLTEEHVQFFLYQLLCGLKHIHSANVIHR
DLKPSNILLNENCDLKICDFGLARDMSADTAATELPSNLTEYVVTRWYRA
PEIMLSSQEYSKAIDVWASGCIFGEMLGRKPMFPGNDYIHQLKLITRTVG
TPTSEDDLWFVKNPKAKVFMLSLPPSLPQDLSKRFPDVSPQALDLMSKML
QLDYQKRISVDAALEHPFFSSVREQAMEYVCPTAVPWGDVETSRLTRSNL
QKMVLRDVSFFHQAAQDYLNIHRAQAMMRGGGGGGGGSRERGREGERERE
ADVARMIVVAGDGGVGREEVPVEQQIAFAPIPTGSGSSAYGGGGGGQQCQ
QH*
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mRNA from alignment at chr8:860890..863503+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G03120.1 ID=NO08G03120.1|Name=NO08G03120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2614bp|location=Sequence derived from alignment at chr8:860890..863503+ (Nannochloropsis oceanica)
AACAACAGGACGGCAGGGCTAGAAAGGGCCACAGTATGGCACCCCTCACC ATCCTGGAAGGGTATTTGCTGAAGCGGGGGCAAATGACGGCCAAGCGTCG TTATTTTTCCTTGCAACACAACCACGAGGGCGACATGAGCCCGTCAACCC TCACATATTGGGGTAGCAAGGAGGACATGGAGGCTAATATCCCTGCGCGT GGTCAGCTCTTGTTGGATGCAGATGGACGGCTGCAGGATCTAGCTCCGAC GGGTCGACGGGGTTTCACGATCACCGCGATGGCACAACGAAAGGCCTGGA CCATGGCCTCTGAGAGCAACAACGAGGAGGACGCCCAGCGGTGGCAGTTG GCGTTGTCAGCGGTACTGGCCAAAGCGGTAGCTACAGCAGCGGTAGCAGC AGCTGTGGAGGAAAAGAAGACGATTCCGGAGTCAGGCACTGGTGGGGGGC TGTCGCAGATGGAGGAAGAGAATGACAGTGCGAGTAATTGTAGCACCAGC AGCAGTCCCCGGTATACGGTCCAAGTGTCCGGTCAGGATTTTGTGTTAGA CAAGCGGTACGACAATATTCGTCCTCTGGGCCACGGGGCGTATGGTGTGG TGATCTCCGCGCAGGACAAGTCGATGGGTGGCGAAAAAGTCGCCATCAAG AAATGCCCCAACGTGTTCGCGGATCCCCTGGACGCCAAGCGGATCGCGCG GGAGATCCGTTTGCTCCGTCATTTCCATCACCCCAATATCGTAAGACTCA CAGACTTACCCTTGCCCCCCAGCCATGACTTTACGGATGTGTACATGGTT ACGGAACAGATGGATACGGACTTGCACCGCGTAATTTATTCGGGCCAGAA GCTGACTGAGGAGCACGTGCAGTTCTTCCTGTACCAGCTGCTGTGCGGCT TGAAACACATTCACTCTGCGAATGTCATTCATCGGGACCTGAAGGTGCAG AGGAAGGAAGGAAGGGAGGGAGGGAGGAAGGGAGGGTTATAGTGATTGAG GGGTACCTACAGTGTTTCATCCTATTTACGACCTCCCCTCTCCCCTCCCT CCCCTCATCCTTTTCTCCATCCCCTCCTAGCCCTCCAACATCCTTCTCAA CGAGAACTGTGACCTGAAAATCTGTGACTTTGGCTTGGCACGAGACATGA GTGCTGACACCGCTGCCACTGAGCTTCCTAGTAATTTGACAGAGTATGTG GTGACGCGATGGTACCGCGCGCCGGAGATAATGCTTTCGAGTCAAGAGTA CAGTAAGGCTATCGGTAAGTATGTCCTCTCCCCTATCCCCTCCTGGGTGC GTTATATCCCTTTTATCACTTTTGTGCCACTCATGTGCCACGGGACATCG TCTACCACCCCCCAAAACGCGCCATTTACTTCCTCCTTTACCCCTCGCTC ACTCCCTTCTCTCCCTCTCTCCCTCCCACCTTAGACGTGTGGGCCTCCGG CTGCATCTTCGGCGAGATGCTGGGGCGCAAGCCCATGTTTCCTGGGAATG ACTACATCCACCAGCTGAAGCTCATCACCCGTACGGTGGGCACCCCGACG TCAGAAGACGACCTCTGGTTCGTCAAGAACCCCAAAGCCAAGGTCTTCAT GCTTTCCCTCCCTCCCTCCCTGCCCCAAGACCTCTCCAAACGCTTCCCTG ACGTCAGTCCTCAAGCCCTCGACTTGATGTCTAAAATGCTACAGCTTGAT TACCAGAAACGAATTTCTGTGGATGCCGCGTTGGAACATCCTTTTTTCTC CTCTGTCCGCGAACAGGCCATGGAATATGTTTGTCCGACAGCGGTTCCTT GGGGTGACGTGGAGACATCTCGGTTGACGAGGAGTAACTTACAAAAAATG GTCTTGAGAGACGTGTCGTTTTTTCACCAGGCCGCGCAGGATTACTTGAA TATCCATCGGGCGCAGGCGATGATGAGGGGAGGGGGAGGGGGAGGAGGAG GGAGCCGGGAGAGAGGGAGGGAGGGAGAGAGGGAGAGGGAGGCGGATGTT GCACGAATGATAGTGGTGGCGGGGGACGGTGGGGTAGGGAGGGAGGAGGT GCCGGTGGAACAGCAGATAGCCTTTGCACCGATACCAACAGGCAGTGGTA GCAGCGCTTACGGCGGTGGCGGTGGGGGGCAGCAGTGCCAACAACATTAA GTTCAACATCGGTAGTGACAGCAGGAATGACTTAGCACGGCGAGCAGTGA GAGCGAGAGAGGGAACGCGGAGGAGGGGACAAGTAGGGGTCCGGGGCAGT GGTGGTGGGTTCACCAGCAGTGAGTGGGAGATATAGTGAAGACTTGCTGT GGGAAGAGTGCTGAGGGTTGCTGTAGCGTCCATGGTGACGGGGCTAGATA TTTGTATGGAGAATGAAAGCTGTGGACTCTGACAGGGAGCTGTCGAAAGA ATGGAAATGGGTAGGAGGGCGAGAAGAAAAGGGAATGTGTGTGTACCTGC AAATAAAGGAATATGTACCAAATTAGCGAGCTGAAATGGACAAAATAAAT GAAACAAATTGCATAGTATTGTGGGGCACTGAAATAAAACAGGACAGGTA AGGTGGGAGTAGACTACTCTATCCGTCACGCTATGAGGAAATGAAAAAAA ATAACAATGAAGTG
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Coding sequence (CDS) from alignment at chr8:860890..863503+

>NO08G03120.1 ID=NO08G03120.1|Name=NO08G03120.1|organism=Nannochloropsis oceanica|type=CDS|length=1809bp|location=Sequence derived from alignment at chr8:860890..863503+ (Nannochloropsis oceanica)
ATGGCACCCCTCACCATCCTGGAAGGGTATTTGCTGAAGCGGGGGCAAAT
GACGGCCAAGCGTCGTTATTTTTCCTTGCAACACAACCACGAGGGCGACA
TGAGCCCGTCAACCCTCACATATTGGGGTAGCAAGGAGGACATGGAGGCT
AATATCCCTGCGCGTGGTCAGCTCTTGTTGGATGCAGATGGACGGCTGCA
GGATCTAGCTCCGACGGGTCGACGGGGTTTCACGATCACCGCGATGGCAC
AACGAAAGGCCTGGACCATGGCCTCTGAGAGCAACAACGAGGAGGACGCC
CAGCGGTGGCAGTTGGCGTTGTCAGCGGTACTGGCCAAAGCGGTAGCTAC
AGCAGCGGTAGCAGCAGCTGTGGAGGAAAAGAAGACGATTCCGGAGTCAG
GCACTGGTGGGGGGCTGTCGCAGATGGAGGAAGAGAATGACAGTGCGAGT
AATTGTAGCACCAGCAGCAGTCCCCGGTATACGGTCCAAGTGTCCGGTCA
GGATTTTGTGTTAGACAAGCGGTACGACAATATTCGTCCTCTGGGCCACG
GGGCGTATGGTGTGGTGATCTCCGCGCAGGACAAGTCGATGGGTGGCGAA
AAAGTCGCCATCAAGAAATGCCCCAACGTGTTCGCGGATCCCCTGGACGC
CAAGCGGATCGCGCGGGAGATCCGTTTGCTCCGTCATTTCCATCACCCCA
ATATCGTAAGACTCACAGACTTACCCTTGCCCCCCAGCCATGACTTTACG
GATGTGTACATGGTTACGGAACAGATGGATACGGACTTGCACCGCGTAAT
TTATTCGGGCCAGAAGCTGACTGAGGAGCACGTGCAGTTCTTCCTGTACC
AGCTGCTGTGCGGCTTGAAACACATTCACTCTGCGAATGTCATTCATCGG
GACCTGAAGCCCTCCAACATCCTTCTCAACGAGAACTGTGACCTGAAAAT
CTGTGACTTTGGCTTGGCACGAGACATGAGTGCTGACACCGCTGCCACTG
AGCTTCCTAGTAATTTGACAGAGTATGTGGTGACGCGATGGTACCGCGCG
CCGGAGATAATGCTTTCGAGTCAAGAGTACAGTAAGGCTATCGACGTGTG
GGCCTCCGGCTGCATCTTCGGCGAGATGCTGGGGCGCAAGCCCATGTTTC
CTGGGAATGACTACATCCACCAGCTGAAGCTCATCACCCGTACGGTGGGC
ACCCCGACGTCAGAAGACGACCTCTGGTTCGTCAAGAACCCCAAAGCCAA
GGTCTTCATGCTTTCCCTCCCTCCCTCCCTGCCCCAAGACCTCTCCAAAC
GCTTCCCTGACGTCAGTCCTCAAGCCCTCGACTTGATGTCTAAAATGCTA
CAGCTTGATTACCAGAAACGAATTTCTGTGGATGCCGCGTTGGAACATCC
TTTTTTCTCCTCTGTCCGCGAACAGGCCATGGAATATGTTTGTCCGACAG
CGGTTCCTTGGGGTGACGTGGAGACATCTCGGTTGACGAGGAGTAACTTA
CAAAAAATGGTCTTGAGAGACGTGTCGTTTTTTCACCAGGCCGCGCAGGA
TTACTTGAATATCCATCGGGCGCAGGCGATGATGAGGGGAGGGGGAGGGG
GAGGAGGAGGGAGCCGGGAGAGAGGGAGGGAGGGAGAGAGGGAGAGGGAG
GCGGATGTTGCACGAATGATAGTGGTGGCGGGGGACGGTGGGGTAGGGAG
GGAGGAGGTGCCGGTGGAACAGCAGATAGCCTTTGCACCGATACCAACAG
GCAGTGGTAGCAGCGCTTACGGCGGTGGCGGTGGGGGGCAGCAGTGCCAA
CAACATTAA
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Synonyms
Publications