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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr8 | genome | chr8:860890..863503 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO08G03120.1 vs.
Match: EWM26758.1 (mitogen-activated protein kinase [Nannochloropsis gaditana]) HSP 1 Score: 703.7 bits (1815), Expect = 4.800e-199 Identity = 372/560 (66.43%), Postives = 432/560 (77.14%), Query Frame = 0
Query: 17 MTAKRRYFSLQHNHEGDMSPSTLTYWGSKEDMEANIPARGQLLLDADGRLQDLAPTGRRGFTITAMAQRKAWTMASESNNEEDAQRWQLALSAVLAKAVATAAVAAAVEEKKTIPESGTGGGLSQMEEENDSASNCSTSSSPRYTVQVSGQDFVLDKRYDNIRPLGHGAYGVVISAQDKSMGGEKVAIKKCPNVFADPLDAKRIAREIRLLRHFHHPNIVRLTDLPLPPSHDFTDVYMVTEQMDTDLHRVIYSGQKLTEEHVQFFLYQLLCGLKHIHSANVIHRDLKPSNILLNENCDLKICDFGLARDMSADTAATELPSNLTEYVVTRWYRAPEIMLSSQEYSKAIDVWASGCIFGEMLGRKPMFPGNDYIHQLKLITRTVGTPTSEDDLWFVKNPKAKVFMLSLPPSLPQDLSKRFPDVSPQALDLMSKMLQLDYQKRISVDAALEHPFFSSVREQAMEYVCPTAVPWGDVETSRLTRSNLQKMVLRDVSFFHQAAQDYLNIHRAQAMMRGGGGGGGGSRE--RGREGEREREADVARMIVVAGDGGVGRE-EVPVE 574
MTAKRRYF L+H+ G STL+YWGSK++ME +PARG L+L AD R+Q+LA GRRGFT+TA QRKAW+MASE+N+ E+ +RWQ AL+A +AKA A ++ TIPES T S RY+V VSG +F+LD+RY+++RPLGHGAYGVV+SA D ++G +KVAIKKCPN+F DP DAKRIAREIRLLRHF HPNIV+LTDLP PP+ DF DVYMV E+MDTDLHRVIYSGQ LTEEH+QFF+YQL+CGLKHIHSANVIHRDLKPSNILLNENCDLKICDFGLARDM AD AATE +NLTEYVVTRWYRAPEIMLSSQEYSKAIDVWA+GCIFGEMLGRKP+FPGNDYIHQLKLITR VGTPTSE DLWFVKNPKAKVFMLSLPPS PQDL+KR P +ALDL+ +MLQLDY KRISVDAAL HPFF+SVR++AMEYVCPT VPWGD+E + T NLQ+ + DV+ FH A++ L AQ G G G G RE R+ R ++ RM+ + G G E E+ VE
Sbjct: 1 MTAKRRYFILEHDERGT---STLSYWGSKQEMENAVPARGLLVLGADSRIQELASIGRRGFTVTA--QRKAWSMASETNDPEEGKRWQAALTAAVAKAEAM--------KRNTIPESNTC---------------LSIYGENRYSVTVSGTEFLLDRRYEDLRPLGHGAYGVVVSALDLALG-QKVAIKKCPNIFEDPSDAKRIAREIRLLRHFQHPNIVKLTDLPPPPALDFFDVYMVAEKMDTDLHRVIYSGQTLTEEHIQFFMYQLMCGLKHIHSANVIHRDLKPSNILLNENCDLKICDFGLARDMGAD-AATEAANNLTEYVVTRWYRAPEIMLSSQEYSKAIDVWAAGCIFGEMLGRKPLFPGNDYIHQLKLITRIVGTPTSEADLWFVKNPKAKVFMLSLPPSPPQDLTKRLPGSGSEALDLLGRMLQLDYSKRISVDAALSHPFFASVRDEAMEYVCPTPVPWGDLEQCKPTCGNLQRAIWEDVAAFHPVAKESL---EAQRGFPGWEGHGPGVREVDSVRQSGRRALSEADRMLESSLAPGQGAELEMAVE 527
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO08G03120.1 ID=NO08G03120.1|Name=NO08G03120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2308bp AACAACAGGACGGCAGGGCTAGAAAGGGCCACAGTATGGCACCCCTCACC ATCCTGGAAGGGTATTTGCTGAAGCGGGGGCAAATGACGGCCAAGCGTCG TTATTTTTCCTTGCAACACAACCACGAGGGCGACATGAGCCCGTCAACCC TCACATATTGGGGTAGCAAGGAGGACATGGAGGCTAATATCCCTGCGCGT GGTCAGCTCTTGTTGGATGCAGATGGACGGCTGCAGGATCTAGCTCCGAC GGGTCGACGGGGTTTCACGATCACCGCGATGGCACAACGAAAGGCCTGGA CCATGGCCTCTGAGAGCAACAACGAGGAGGACGCCCAGCGGTGGCAGTTG GCGTTGTCAGCGGTACTGGCCAAAGCGGTAGCTACAGCAGCGGTAGCAGC AGCTGTGGAGGAAAAGAAGACGATTCCGGAGTCAGGCACTGGTGGGGGGC TGTCGCAGATGGAGGAAGAGAATGACAGTGCGAGTAATTGTAGCACCAGC AGCAGTCCCCGGTATACGGTCCAAGTGTCCGGTCAGGATTTTGTGTTAGA CAAGCGGTACGACAATATTCGTCCTCTGGGCCACGGGGCGTATGGTGTGG TGATCTCCGCGCAGGACAAGTCGATGGGTGGCGAAAAAGTCGCCATCAAG AAATGCCCCAACGTGTTCGCGGATCCCCTGGACGCCAAGCGGATCGCGCG GGAGATCCGTTTGCTCCGTCATTTCCATCACCCCAATATCGTAAGACTCA CAGACTTACCCTTGCCCCCCAGCCATGACTTTACGGATGTGTACATGGTT ACGGAACAGATGGATACGGACTTGCACCGCGTAATTTATTCGGGCCAGAA GCTGACTGAGGAGCACGTGCAGTTCTTCCTGTACCAGCTGCTGTGCGGCT TGAAACACATTCACTCTGCGAATGTCATTCATCGGGACCTGAAGCCCTCC AACATCCTTCTCAACGAGAACTGTGACCTGAAAATCTGTGACTTTGGCTT GGCACGAGACATGAGTGCTGACACCGCTGCCACTGAGCTTCCTAGTAATT TGACAGAGTATGTGGTGACGCGATGGTACCGCGCGCCGGAGATAATGCTT TCGAGTCAAGAGTACAGTAAGGCTATCGACGTGTGGGCCTCCGGCTGCAT CTTCGGCGAGATGCTGGGGCGCAAGCCCATGTTTCCTGGGAATGACTACA TCCACCAGCTGAAGCTCATCACCCGTACGGTGGGCACCCCGACGTCAGAA GACGACCTCTGGTTCGTCAAGAACCCCAAAGCCAAGGTCTTCATGCTTTC CCTCCCTCCCTCCCTGCCCCAAGACCTCTCCAAACGCTTCCCTGACGTCA GTCCTCAAGCCCTCGACTTGATGTCTAAAATGCTACAGCTTGATTACCAG AAACGAATTTCTGTGGATGCCGCGTTGGAACATCCTTTTTTCTCCTCTGT CCGCGAACAGGCCATGGAATATGTTTGTCCGACAGCGGTTCCTTGGGGTG ACGTGGAGACATCTCGGTTGACGAGGAGTAACTTACAAAAAATGGTCTTG AGAGACGTGTCGTTTTTTCACCAGGCCGCGCAGGATTACTTGAATATCCA TCGGGCGCAGGCGATGATGAGGGGAGGGGGAGGGGGAGGAGGAGGGAGCC GGGAGAGAGGGAGGGAGGGAGAGAGGGAGAGGGAGGCGGATGTTGCACGA ATGATAGTGGTGGCGGGGGACGGTGGGGTAGGGAGGGAGGAGGTGCCGGT GGAACAGCAGATAGCCTTTGCACCGATACCAACAGGCAGTGGTAGCAGCG CTTACGGCGGTGGCGGTGGGGGGCAGCAGTGCCAACAACATTAAGTTCAA CATCGGTAGTGACAGCAGGAATGACTTAGCACGGCGAGCAGTGAGAGCGA GAGAGGGAACGCGGAGGAGGGGACAAGTAGGGGTCCGGGGCAGTGGTGGT GGGTTCACCAGCAGTGAGTGGGAGATATAGTGAAGACTTGCTGTGGGAAG AGTGCTGAGGGTTGCTGTAGCGTCCATGGTGACGGGGCTAGATATTTGTA TGGAGAATGAAAGCTGTGGACTCTGACAGGGAGCTGTCGAAAGAATGGAA ATGGGTAGGAGGGCGAGAAGAAAAGGGAATGTGTGTGTACCTGCAAATAA AGGAATATGTACCAAATTAGCGAGCTGAAATGGACAAAATAAATGAAACA AATTGCATAGTATTGTGGGGCACTGAAATAAAACAGGACAGGTAAGGTGG GAGTAGACTACTCTATCCGTCACGCTATGAGGAAATGAAAAAAAATAACA ATGAAGTG back to topprotein sequence of NO08G03120.1 >NO08G03120.1-protein ID=NO08G03120.1-protein|Name=NO08G03120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=603bp MAPLTILEGYLLKRGQMTAKRRYFSLQHNHEGDMSPSTLTYWGSKEDMEA NIPARGQLLLDADGRLQDLAPTGRRGFTITAMAQRKAWTMASESNNEEDA QRWQLALSAVLAKAVATAAVAAAVEEKKTIPESGTGGGLSQMEEENDSAS NCSTSSSPRYTVQVSGQDFVLDKRYDNIRPLGHGAYGVVISAQDKSMGGE KVAIKKCPNVFADPLDAKRIAREIRLLRHFHHPNIVRLTDLPLPPSHDFT DVYMVTEQMDTDLHRVIYSGQKLTEEHVQFFLYQLLCGLKHIHSANVIHR DLKPSNILLNENCDLKICDFGLARDMSADTAATELPSNLTEYVVTRWYRA PEIMLSSQEYSKAIDVWASGCIFGEMLGRKPMFPGNDYIHQLKLITRTVG TPTSEDDLWFVKNPKAKVFMLSLPPSLPQDLSKRFPDVSPQALDLMSKML QLDYQKRISVDAALEHPFFSSVREQAMEYVCPTAVPWGDVETSRLTRSNL QKMVLRDVSFFHQAAQDYLNIHRAQAMMRGGGGGGGGSRERGREGERERE ADVARMIVVAGDGGVGREEVPVEQQIAFAPIPTGSGSSAYGGGGGGQQCQ QH* back to topmRNA from alignment at chr8:860890..863503+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO08G03120.1 ID=NO08G03120.1|Name=NO08G03120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2614bp|location=Sequence derived from alignment at chr8:860890..863503+ (Nannochloropsis oceanica) AACAACAGGACGGCAGGGCTAGAAAGGGCCACAGTATGGCACCCCTCACC
ATCCTGGAAGGGTATTTGCTGAAGCGGGGGCAAATGACGGCCAAGCGTCG
TTATTTTTCCTTGCAACACAACCACGAGGGCGACATGAGCCCGTCAACCC
TCACATATTGGGGTAGCAAGGAGGACATGGAGGCTAATATCCCTGCGCGT
GGTCAGCTCTTGTTGGATGCAGATGGACGGCTGCAGGATCTAGCTCCGAC
GGGTCGACGGGGTTTCACGATCACCGCGATGGCACAACGAAAGGCCTGGA
CCATGGCCTCTGAGAGCAACAACGAGGAGGACGCCCAGCGGTGGCAGTTG
GCGTTGTCAGCGGTACTGGCCAAAGCGGTAGCTACAGCAGCGGTAGCAGC
AGCTGTGGAGGAAAAGAAGACGATTCCGGAGTCAGGCACTGGTGGGGGGC
TGTCGCAGATGGAGGAAGAGAATGACAGTGCGAGTAATTGTAGCACCAGC
AGCAGTCCCCGGTATACGGTCCAAGTGTCCGGTCAGGATTTTGTGTTAGA
CAAGCGGTACGACAATATTCGTCCTCTGGGCCACGGGGCGTATGGTGTGG
TGATCTCCGCGCAGGACAAGTCGATGGGTGGCGAAAAAGTCGCCATCAAG
AAATGCCCCAACGTGTTCGCGGATCCCCTGGACGCCAAGCGGATCGCGCG
GGAGATCCGTTTGCTCCGTCATTTCCATCACCCCAATATCGTAAGACTCA
CAGACTTACCCTTGCCCCCCAGCCATGACTTTACGGATGTGTACATGGTT
ACGGAACAGATGGATACGGACTTGCACCGCGTAATTTATTCGGGCCAGAA
GCTGACTGAGGAGCACGTGCAGTTCTTCCTGTACCAGCTGCTGTGCGGCT
TGAAACACATTCACTCTGCGAATGTCATTCATCGGGACCTGAAGGTGCAG
AGGAAGGAAGGAAGGGAGGGAGGGAGGAAGGGAGGGTTATAGTGATTGAG
GGGTACCTACAGTGTTTCATCCTATTTACGACCTCCCCTCTCCCCTCCCT
CCCCTCATCCTTTTCTCCATCCCCTCCTAGCCCTCCAACATCCTTCTCAA
CGAGAACTGTGACCTGAAAATCTGTGACTTTGGCTTGGCACGAGACATGA
GTGCTGACACCGCTGCCACTGAGCTTCCTAGTAATTTGACAGAGTATGTG
GTGACGCGATGGTACCGCGCGCCGGAGATAATGCTTTCGAGTCAAGAGTA
CAGTAAGGCTATCGGTAAGTATGTCCTCTCCCCTATCCCCTCCTGGGTGC
GTTATATCCCTTTTATCACTTTTGTGCCACTCATGTGCCACGGGACATCG
TCTACCACCCCCCAAAACGCGCCATTTACTTCCTCCTTTACCCCTCGCTC
ACTCCCTTCTCTCCCTCTCTCCCTCCCACCTTAGACGTGTGGGCCTCCGG
CTGCATCTTCGGCGAGATGCTGGGGCGCAAGCCCATGTTTCCTGGGAATG
ACTACATCCACCAGCTGAAGCTCATCACCCGTACGGTGGGCACCCCGACG
TCAGAAGACGACCTCTGGTTCGTCAAGAACCCCAAAGCCAAGGTCTTCAT
GCTTTCCCTCCCTCCCTCCCTGCCCCAAGACCTCTCCAAACGCTTCCCTG
ACGTCAGTCCTCAAGCCCTCGACTTGATGTCTAAAATGCTACAGCTTGAT
TACCAGAAACGAATTTCTGTGGATGCCGCGTTGGAACATCCTTTTTTCTC
CTCTGTCCGCGAACAGGCCATGGAATATGTTTGTCCGACAGCGGTTCCTT
GGGGTGACGTGGAGACATCTCGGTTGACGAGGAGTAACTTACAAAAAATG
GTCTTGAGAGACGTGTCGTTTTTTCACCAGGCCGCGCAGGATTACTTGAA
TATCCATCGGGCGCAGGCGATGATGAGGGGAGGGGGAGGGGGAGGAGGAG
GGAGCCGGGAGAGAGGGAGGGAGGGAGAGAGGGAGAGGGAGGCGGATGTT
GCACGAATGATAGTGGTGGCGGGGGACGGTGGGGTAGGGAGGGAGGAGGT
GCCGGTGGAACAGCAGATAGCCTTTGCACCGATACCAACAGGCAGTGGTA
GCAGCGCTTACGGCGGTGGCGGTGGGGGGCAGCAGTGCCAACAACATTAA
GTTCAACATCGGTAGTGACAGCAGGAATGACTTAGCACGGCGAGCAGTGA
GAGCGAGAGAGGGAACGCGGAGGAGGGGACAAGTAGGGGTCCGGGGCAGT
GGTGGTGGGTTCACCAGCAGTGAGTGGGAGATATAGTGAAGACTTGCTGT
GGGAAGAGTGCTGAGGGTTGCTGTAGCGTCCATGGTGACGGGGCTAGATA
TTTGTATGGAGAATGAAAGCTGTGGACTCTGACAGGGAGCTGTCGAAAGA
ATGGAAATGGGTAGGAGGGCGAGAAGAAAAGGGAATGTGTGTGTACCTGC
AAATAAAGGAATATGTACCAAATTAGCGAGCTGAAATGGACAAAATAAAT
GAAACAAATTGCATAGTATTGTGGGGCACTGAAATAAAACAGGACAGGTA
AGGTGGGAGTAGACTACTCTATCCGTCACGCTATGAGGAAATGAAAAAAA
ATAACAATGAAGTG back to topCoding sequence (CDS) from alignment at chr8:860890..863503+ >NO08G03120.1 ID=NO08G03120.1|Name=NO08G03120.1|organism=Nannochloropsis oceanica|type=CDS|length=1809bp|location=Sequence derived from alignment at chr8:860890..863503+ (Nannochloropsis oceanica) ATGGCACCCCTCACCATCCTGGAAGGGTATTTGCTGAAGCGGGGGCAAAT GACGGCCAAGCGTCGTTATTTTTCCTTGCAACACAACCACGAGGGCGACA TGAGCCCGTCAACCCTCACATATTGGGGTAGCAAGGAGGACATGGAGGCT AATATCCCTGCGCGTGGTCAGCTCTTGTTGGATGCAGATGGACGGCTGCA GGATCTAGCTCCGACGGGTCGACGGGGTTTCACGATCACCGCGATGGCAC AACGAAAGGCCTGGACCATGGCCTCTGAGAGCAACAACGAGGAGGACGCC CAGCGGTGGCAGTTGGCGTTGTCAGCGGTACTGGCCAAAGCGGTAGCTAC AGCAGCGGTAGCAGCAGCTGTGGAGGAAAAGAAGACGATTCCGGAGTCAG GCACTGGTGGGGGGCTGTCGCAGATGGAGGAAGAGAATGACAGTGCGAGT AATTGTAGCACCAGCAGCAGTCCCCGGTATACGGTCCAAGTGTCCGGTCA GGATTTTGTGTTAGACAAGCGGTACGACAATATTCGTCCTCTGGGCCACG GGGCGTATGGTGTGGTGATCTCCGCGCAGGACAAGTCGATGGGTGGCGAA AAAGTCGCCATCAAGAAATGCCCCAACGTGTTCGCGGATCCCCTGGACGC CAAGCGGATCGCGCGGGAGATCCGTTTGCTCCGTCATTTCCATCACCCCA ATATCGTAAGACTCACAGACTTACCCTTGCCCCCCAGCCATGACTTTACG GATGTGTACATGGTTACGGAACAGATGGATACGGACTTGCACCGCGTAAT TTATTCGGGCCAGAAGCTGACTGAGGAGCACGTGCAGTTCTTCCTGTACC AGCTGCTGTGCGGCTTGAAACACATTCACTCTGCGAATGTCATTCATCGG GACCTGAAGCCCTCCAACATCCTTCTCAACGAGAACTGTGACCTGAAAAT CTGTGACTTTGGCTTGGCACGAGACATGAGTGCTGACACCGCTGCCACTG AGCTTCCTAGTAATTTGACAGAGTATGTGGTGACGCGATGGTACCGCGCG CCGGAGATAATGCTTTCGAGTCAAGAGTACAGTAAGGCTATCGACGTGTG GGCCTCCGGCTGCATCTTCGGCGAGATGCTGGGGCGCAAGCCCATGTTTC CTGGGAATGACTACATCCACCAGCTGAAGCTCATCACCCGTACGGTGGGC ACCCCGACGTCAGAAGACGACCTCTGGTTCGTCAAGAACCCCAAAGCCAA GGTCTTCATGCTTTCCCTCCCTCCCTCCCTGCCCCAAGACCTCTCCAAAC GCTTCCCTGACGTCAGTCCTCAAGCCCTCGACTTGATGTCTAAAATGCTA CAGCTTGATTACCAGAAACGAATTTCTGTGGATGCCGCGTTGGAACATCC TTTTTTCTCCTCTGTCCGCGAACAGGCCATGGAATATGTTTGTCCGACAG CGGTTCCTTGGGGTGACGTGGAGACATCTCGGTTGACGAGGAGTAACTTA CAAAAAATGGTCTTGAGAGACGTGTCGTTTTTTCACCAGGCCGCGCAGGA TTACTTGAATATCCATCGGGCGCAGGCGATGATGAGGGGAGGGGGAGGGG GAGGAGGAGGGAGCCGGGAGAGAGGGAGGGAGGGAGAGAGGGAGAGGGAG GCGGATGTTGCACGAATGATAGTGGTGGCGGGGGACGGTGGGGTAGGGAG GGAGGAGGTGCCGGTGGAACAGCAGATAGCCTTTGCACCGATACCAACAG GCAGTGGTAGCAGCGCTTACGGCGGTGGCGGTGGGGGGCAGCAGTGCCAA CAACATTAA back to top
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