NO08G03090.1, NO08G03090.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G03090.1
Unique NameNO08G03090.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1563
Alignment locationchr8:854227..855789 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:854227..855789 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO08G03090.1 vs.
Match: EWM26774.1 (di-glucose binding, kinesin motor domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 630.6 bits (1625), Expect = 4.400e-177
Identity = 368/530 (69.43%), Postives = 425/530 (80.19%), Query Frame = 0
Query:    1 MASQVWSTMRRRGGRFLENLNQTVEGASSEFLELGDSFLEGS-RGGLNDEIGPEEGYKAALIQFQLDQVKLTKEYQKVIGEKDAELGRVRALYTAETGKVLDGG------VEKNADASGEKEMMGSTMDFGTFVGGRGDPMAAFVGMSAEQLLAQVEVLLDSVTSWEARVAELVESKANYAAQAAQMRLQAERSELRLGDLVDRVKLQQTEMEKYILMAEEGRMRTLKDRETIEGLVKDYTTLVSESQAAEAEHTSMIDELENKRDELQVKVKAYERNIIQLIDTQAEIGLKQ---GEVKPSS----STTPSFSAVAPAVEQLQKKVEAQEEEIKRLLLASSAPAAPPTPQSGGPDATTLLARAEAAEAEIERLKKELERTKKTLEQATKAGEKLGKDHAMLRAQREEEERAEAALREEVTELQAKLEAAYKGSKAELALVQDKLVKMEGALIREVEKARAVASEEAMQRYQKVVEVANQEKAQALEMYAQESRKRKLIHNKLLELQGNIRVLCRVRPMLAMEMAGGEGG 517
            MASQ+WSTMR+RGG+FLENLN TVEG +SEF EL D FLEGS RG  N++IGPEEGYKAALIQFQLDQVKLTKEYQKVIGEK+AEL RVR LY  ETGK LDG       V  NAD S     + S +  GT  GGR +PMAAF  MSA+QL AQVEVLLDSVTSWE+RVAELVESKA+YAAQ A+MRLQ ERS+LR+GDLVDRVKLQQ+EMEKYILMAEEGR RT+KDRETIEGLV+DYT LV+ESQA E +  S I++LE KRDEL VK+KAYERNII LID+QAE GLK    G  K  S    S   S + +   V+ LQK+++A+EE+IK+LL + +A A    P +  P  T LL RA+ AEAE ERL+KELER K++LEQ TKAGEK+  D+A LRA+R+EEERAEAALREEVTELQAKLEA+YKG KAE+A +QD+LVKMEGA++REVE AR  A EEA Q YQ++VEVANQEK QALE+YAQE+RKRK +HNKLLELQGNIRVLCRVRPMLA+E A GEGG
Sbjct:    1 MASQMWSTMRKRGGKFLENLNHTVEGTASEFFELDDGFLEGSCRGEANNQIGPEEGYKAALIQFQLDQVKLTKEYQKVIGEKEAELRRVRELYKTETGKDLDGDDQGADPVVDNADTS-----VSSLIGVGTDSGGR-NPMAAFANMSADQLRAQVEVLLDSVTSWESRVAELVESKADYAAQVARMRLQVERSDLRMGDLVDRVKLQQSEMEKYILMAEEGRARTVKDRETIEGLVRDYTALVAESQAQERQQASAIEDLETKRDELVVKLKAYERNIIHLIDSQAEAGLKHQDGGAAKADSHAETSAVDSTATMTATVDALQKEIKAKEEKIKQLLASPAASA----PHTAHPPDTALLERAQVAEAEAERLRKELERAKQSLEQVTKAGEKVSSDYAALRARRDEEERAEAALREEVTELQAKLEASYKGGKAEIAALQDRLVKMEGAMVREVEGARVQAREEAKQTYQRLVEVANQEKEQALELYAQENRKRKAVHNKLLELQGNIRVLCRVRPMLAVEKASGEGG 520          
The following BLAST results are available for this feature:
BLAST of NO08G03090.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26774.14.400e-17769.43di-glucose binding, kinesin motor domain containin... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03090NO08G03090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G03090.1NO08G03090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G03090.1.cds1NO08G03090.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G03090.1 ID=NO08G03090.1|Name=NO08G03090.1|organism=Nannochloropsis oceanica|type=mRNA|length=1563bp
ATGGCCTCCCAGGTCTGGAGCACGATGCGGCGGCGAGGCGGGCGGTTCCT
GGAAAACCTGAACCAGACGGTGGAGGGCGCGTCGAGTGAATTCCTAGAGC
TGGGGGACAGCTTTCTCGAGGGGTCTAGGGGCGGGTTGAACGACGAAATT
GGACCCGAGGAAGGGTACAAGGCTGCCTTGATTCAGTTTCAGCTGGATCA
GGTGAAGCTGACAAAGGAGTACCAGAAGGTAATAGGGGAGAAGGATGCAG
AGCTAGGTCGTGTCCGCGCGTTATACACGGCTGAGACGGGCAAGGTCTTG
GATGGGGGCGTGGAGAAGAATGCGGATGCCAGTGGTGAGAAGGAGATGAT
GGGCTCTACCATGGATTTTGGGACGTTTGTTGGAGGAAGAGGCGACCCGA
TGGCAGCATTTGTGGGGATGAGCGCGGAGCAATTGCTAGCGCAGGTCGAG
GTATTGTTGGACAGTGTAACTTCGTGGGAGGCGAGGGTGGCGGAGCTGGT
GGAGAGTAAGGCGAACTACGCCGCTCAAGCGGCGCAGATGCGCTTACAGG
CTGAGCGATCGGAATTGAGGCTGGGGGATCTGGTAGACCGCGTGAAATTG
CAGCAGACGGAAATGGAGAAATATATTTTAATGGCGGAGGAGGGGAGGAT
GCGGACGCTCAAGGATAGAGAGACGATTGAGGGCTTGGTCAAGGATTACA
CGACTTTGGTATCTGAATCCCAGGCAGCAGAGGCCGAGCACACCTCGATG
ATTGACGAGTTGGAGAACAAGCGCGATGAGCTCCAAGTGAAAGTGAAGGC
CTACGAAAGGAACATCATTCAGCTGATCGACACCCAGGCCGAGATAGGGC
TGAAGCAGGGAGAAGTCAAGCCATCCTCCTCTACCACCCCTTCCTTTTCT
GCTGTTGCCCCTGCCGTCGAACAGCTTCAAAAGAAAGTGGAAGCTCAGGA
AGAAGAAATCAAGCGTCTTCTTCTTGCCTCGTCCGCACCTGCTGCCCCTC
CTACCCCCCAAAGTGGTGGCCCTGACGCTACGACCCTCTTAGCCCGTGCA
GAAGCCGCTGAGGCAGAAATTGAGAGACTGAAGAAGGAGTTGGAACGAAC
GAAGAAGACCCTCGAACAAGCGACAAAGGCAGGAGAGAAATTGGGGAAGG
ACCATGCCATGCTGAGGGCGCAACGCGAGGAGGAGGAGCGGGCCGAGGCT
GCTTTAAGAGAGGAAGTGACGGAATTACAAGCGAAGCTCGAGGCGGCTTA
TAAGGGGAGCAAGGCTGAATTGGCCTTGGTACAGGATAAGCTCGTCAAGA
TGGAGGGGGCGCTGATCAGGGAGGTAGAGAAGGCGCGGGCGGTCGCGAGC
GAGGAGGCGATGCAGCGTTATCAGAAAGTGGTCGAAGTGGCGAATCAGGA
GAAGGCCCAGGCGTTAGAAATGTACGCGCAGGAGAGTCGAAAGAGGAAAC
TGATTCACAATAAGCTGTTGGAATTGCAGGGAAATATTCGGGTATTGTGC
CGGGTAAGGCCGATGCTGGCGATGGAGATGGCAGGAGGGGAGGGAGGGGG
GGGAAGGACGTGA
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protein sequence of NO08G03090.1

>NO08G03090.1-protein ID=NO08G03090.1-protein|Name=NO08G03090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=521bp
MASQVWSTMRRRGGRFLENLNQTVEGASSEFLELGDSFLEGSRGGLNDEI
GPEEGYKAALIQFQLDQVKLTKEYQKVIGEKDAELGRVRALYTAETGKVL
DGGVEKNADASGEKEMMGSTMDFGTFVGGRGDPMAAFVGMSAEQLLAQVE
VLLDSVTSWEARVAELVESKANYAAQAAQMRLQAERSELRLGDLVDRVKL
QQTEMEKYILMAEEGRMRTLKDRETIEGLVKDYTTLVSESQAAEAEHTSM
IDELENKRDELQVKVKAYERNIIQLIDTQAEIGLKQGEVKPSSSTTPSFS
AVAPAVEQLQKKVEAQEEEIKRLLLASSAPAAPPTPQSGGPDATTLLARA
EAAEAEIERLKKELERTKKTLEQATKAGEKLGKDHAMLRAQREEEERAEA
ALREEVTELQAKLEAAYKGSKAELALVQDKLVKMEGALIREVEKARAVAS
EEAMQRYQKVVEVANQEKAQALEMYAQESRKRKLIHNKLLELQGNIRVLC
RVRPMLAMEMAGGEGGGGRT*
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mRNA from alignment at chr8:854227..855789-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G03090.1 ID=NO08G03090.1|Name=NO08G03090.1|organism=Nannochloropsis oceanica|type=mRNA|length=1563bp|location=Sequence derived from alignment at chr8:854227..855789- (Nannochloropsis oceanica)
ATGGCCTCCCAGGTCTGGAGCACGATGCGGCGGCGAGGCGGGCGGTTCCT GGAAAACCTGAACCAGACGGTGGAGGGCGCGTCGAGTGAATTCCTAGAGC TGGGGGACAGCTTTCTCGAGGGGTCTAGGGGCGGGTTGAACGACGAAATT GGACCCGAGGAAGGGTACAAGGCTGCCTTGATTCAGTTTCAGCTGGATCA GGTGAAGCTGACAAAGGAGTACCAGAAGGTAATAGGGGAGAAGGATGCAG AGCTAGGTCGTGTCCGCGCGTTATACACGGCTGAGACGGGCAAGGTCTTG GATGGGGGCGTGGAGAAGAATGCGGATGCCAGTGGTGAGAAGGAGATGAT GGGCTCTACCATGGATTTTGGGACGTTTGTTGGAGGAAGAGGCGACCCGA TGGCAGCATTTGTGGGGATGAGCGCGGAGCAATTGCTAGCGCAGGTCGAG GTATTGTTGGACAGTGTAACTTCGTGGGAGGCGAGGGTGGCGGAGCTGGT GGAGAGTAAGGCGAACTACGCCGCTCAAGCGGCGCAGATGCGCTTACAGG CTGAGCGATCGGAATTGAGGCTGGGGGATCTGGTAGACCGCGTGAAATTG CAGCAGACGGAAATGGAGAAATATATTTTAATGGCGGAGGAGGGGAGGAT GCGGACGCTCAAGGATAGAGAGACGATTGAGGGCTTGGTCAAGGATTACA CGACTTTGGTATCTGAATCCCAGGCAGCAGAGGCCGAGCACACCTCGATG ATTGACGAGTTGGAGAACAAGCGCGATGAGCTCCAAGTGAAAGTGAAGGC CTACGAAAGGAACATCATTCAGCTGATCGACACCCAGGCCGAGATAGGGC TGAAGCAGGGAGAAGTCAAGCCATCCTCCTCTACCACCCCTTCCTTTTCT GCTGTTGCCCCTGCCGTCGAACAGCTTCAAAAGAAAGTGGAAGCTCAGGA AGAAGAAATCAAGCGTCTTCTTCTTGCCTCGTCCGCACCTGCTGCCCCTC CTACCCCCCAAAGTGGTGGCCCTGACGCTACGACCCTCTTAGCCCGTGCA GAAGCCGCTGAGGCAGAAATTGAGAGACTGAAGAAGGAGTTGGAACGAAC GAAGAAGACCCTCGAACAAGCGACAAAGGCAGGAGAGAAATTGGGGAAGG ACCATGCCATGCTGAGGGCGCAACGCGAGGAGGAGGAGCGGGCCGAGGCT GCTTTAAGAGAGGAAGTGACGGAATTACAAGCGAAGCTCGAGGCGGCTTA TAAGGGGAGCAAGGCTGAATTGGCCTTGGTACAGGATAAGCTCGTCAAGA TGGAGGGGGCGCTGATCAGGGAGGTAGAGAAGGCGCGGGCGGTCGCGAGC GAGGAGGCGATGCAGCGTTATCAGAAAGTGGTCGAAGTGGCGAATCAGGA GAAGGCCCAGGCGTTAGAAATGTACGCGCAGGAGAGTCGAAAGAGGAAAC TGATTCACAATAAGCTGTTGGAATTGCAGGGAAATATTCGGGTATTGTGC CGGGTAAGGCCGATGCTGGCGATGGAGATGGCAGGAGGGGAGGGAGGGGG GGGAAGGACGTGA
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Coding sequence (CDS) from alignment at chr8:854227..855789-

>NO08G03090.1 ID=NO08G03090.1|Name=NO08G03090.1|organism=Nannochloropsis oceanica|type=CDS|length=1563bp|location=Sequence derived from alignment at chr8:854227..855789- (Nannochloropsis oceanica)
ATGGCCTCCCAGGTCTGGAGCACGATGCGGCGGCGAGGCGGGCGGTTCCT
GGAAAACCTGAACCAGACGGTGGAGGGCGCGTCGAGTGAATTCCTAGAGC
TGGGGGACAGCTTTCTCGAGGGGTCTAGGGGCGGGTTGAACGACGAAATT
GGACCCGAGGAAGGGTACAAGGCTGCCTTGATTCAGTTTCAGCTGGATCA
GGTGAAGCTGACAAAGGAGTACCAGAAGGTAATAGGGGAGAAGGATGCAG
AGCTAGGTCGTGTCCGCGCGTTATACACGGCTGAGACGGGCAAGGTCTTG
GATGGGGGCGTGGAGAAGAATGCGGATGCCAGTGGTGAGAAGGAGATGAT
GGGCTCTACCATGGATTTTGGGACGTTTGTTGGAGGAAGAGGCGACCCGA
TGGCAGCATTTGTGGGGATGAGCGCGGAGCAATTGCTAGCGCAGGTCGAG
GTATTGTTGGACAGTGTAACTTCGTGGGAGGCGAGGGTGGCGGAGCTGGT
GGAGAGTAAGGCGAACTACGCCGCTCAAGCGGCGCAGATGCGCTTACAGG
CTGAGCGATCGGAATTGAGGCTGGGGGATCTGGTAGACCGCGTGAAATTG
CAGCAGACGGAAATGGAGAAATATATTTTAATGGCGGAGGAGGGGAGGAT
GCGGACGCTCAAGGATAGAGAGACGATTGAGGGCTTGGTCAAGGATTACA
CGACTTTGGTATCTGAATCCCAGGCAGCAGAGGCCGAGCACACCTCGATG
ATTGACGAGTTGGAGAACAAGCGCGATGAGCTCCAAGTGAAAGTGAAGGC
CTACGAAAGGAACATCATTCAGCTGATCGACACCCAGGCCGAGATAGGGC
TGAAGCAGGGAGAAGTCAAGCCATCCTCCTCTACCACCCCTTCCTTTTCT
GCTGTTGCCCCTGCCGTCGAACAGCTTCAAAAGAAAGTGGAAGCTCAGGA
AGAAGAAATCAAGCGTCTTCTTCTTGCCTCGTCCGCACCTGCTGCCCCTC
CTACCCCCCAAAGTGGTGGCCCTGACGCTACGACCCTCTTAGCCCGTGCA
GAAGCCGCTGAGGCAGAAATTGAGAGACTGAAGAAGGAGTTGGAACGAAC
GAAGAAGACCCTCGAACAAGCGACAAAGGCAGGAGAGAAATTGGGGAAGG
ACCATGCCATGCTGAGGGCGCAACGCGAGGAGGAGGAGCGGGCCGAGGCT
GCTTTAAGAGAGGAAGTGACGGAATTACAAGCGAAGCTCGAGGCGGCTTA
TAAGGGGAGCAAGGCTGAATTGGCCTTGGTACAGGATAAGCTCGTCAAGA
TGGAGGGGGCGCTGATCAGGGAGGTAGAGAAGGCGCGGGCGGTCGCGAGC
GAGGAGGCGATGCAGCGTTATCAGAAAGTGGTCGAAGTGGCGAATCAGGA
GAAGGCCCAGGCGTTAGAAATGTACGCGCAGGAGAGTCGAAAGAGGAAAC
TGATTCACAATAAGCTGTTGGAATTGCAGGGAAATATTCGGGTATTGTGC
CGGGTAAGGCCGATGCTGGCGATGGAGATGGCAGGAGGGGAGGGAGGGGG
GGGAAGGACGTGA
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Synonyms
Publications