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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr8 | genome | chr8:854227..855789 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO08G03090.1 vs.
Match: EWM26774.1 (di-glucose binding, kinesin motor domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 630.6 bits (1625), Expect = 4.400e-177 Identity = 368/530 (69.43%), Postives = 425/530 (80.19%), Query Frame = 0
Query: 1 MASQVWSTMRRRGGRFLENLNQTVEGASSEFLELGDSFLEGS-RGGLNDEIGPEEGYKAALIQFQLDQVKLTKEYQKVIGEKDAELGRVRALYTAETGKVLDGG------VEKNADASGEKEMMGSTMDFGTFVGGRGDPMAAFVGMSAEQLLAQVEVLLDSVTSWEARVAELVESKANYAAQAAQMRLQAERSELRLGDLVDRVKLQQTEMEKYILMAEEGRMRTLKDRETIEGLVKDYTTLVSESQAAEAEHTSMIDELENKRDELQVKVKAYERNIIQLIDTQAEIGLKQ---GEVKPSS----STTPSFSAVAPAVEQLQKKVEAQEEEIKRLLLASSAPAAPPTPQSGGPDATTLLARAEAAEAEIERLKKELERTKKTLEQATKAGEKLGKDHAMLRAQREEEERAEAALREEVTELQAKLEAAYKGSKAELALVQDKLVKMEGALIREVEKARAVASEEAMQRYQKVVEVANQEKAQALEMYAQESRKRKLIHNKLLELQGNIRVLCRVRPMLAMEMAGGEGG 517
MASQ+WSTMR+RGG+FLENLN TVEG +SEF EL D FLEGS RG N++IGPEEGYKAALIQFQLDQVKLTKEYQKVIGEK+AEL RVR LY ETGK LDG V NAD S + S + GT GGR +PMAAF MSA+QL AQVEVLLDSVTSWE+RVAELVESKA+YAAQ A+MRLQ ERS+LR+GDLVDRVKLQQ+EMEKYILMAEEGR RT+KDRETIEGLV+DYT LV+ESQA E + S I++LE KRDEL VK+KAYERNII LID+QAE GLK G K S S S + + V+ LQK+++A+EE+IK+LL + +A A P + P T LL RA+ AEAE ERL+KELER K++LEQ TKAGEK+ D+A LRA+R+EEERAEAALREEVTELQAKLEA+YKG KAE+A +QD+LVKMEGA++REVE AR A EEA Q YQ++VEVANQEK QALE+YAQE+RKRK +HNKLLELQGNIRVLCRVRPMLA+E A GEGG
Sbjct: 1 MASQMWSTMRKRGGKFLENLNHTVEGTASEFFELDDGFLEGSCRGEANNQIGPEEGYKAALIQFQLDQVKLTKEYQKVIGEKEAELRRVRELYKTETGKDLDGDDQGADPVVDNADTS-----VSSLIGVGTDSGGR-NPMAAFANMSADQLRAQVEVLLDSVTSWESRVAELVESKADYAAQVARMRLQVERSDLRMGDLVDRVKLQQSEMEKYILMAEEGRARTVKDRETIEGLVRDYTALVAESQAQERQQASAIEDLETKRDELVVKLKAYERNIIHLIDSQAEAGLKHQDGGAAKADSHAETSAVDSTATMTATVDALQKEIKAKEEKIKQLLASPAASA----PHTAHPPDTALLERAQVAEAEAERLRKELERAKQSLEQVTKAGEKVSSDYAALRARRDEEERAEAALREEVTELQAKLEASYKGGKAEIAALQDRLVKMEGAMVREVEGARVQAREEAKQTYQRLVEVANQEKEQALELYAQENRKRKAVHNKLLELQGNIRVLCRVRPMLAVEKASGEGG 520
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO08G03090.1 ID=NO08G03090.1|Name=NO08G03090.1|organism=Nannochloropsis oceanica|type=mRNA|length=1563bp ATGGCCTCCCAGGTCTGGAGCACGATGCGGCGGCGAGGCGGGCGGTTCCT GGAAAACCTGAACCAGACGGTGGAGGGCGCGTCGAGTGAATTCCTAGAGC TGGGGGACAGCTTTCTCGAGGGGTCTAGGGGCGGGTTGAACGACGAAATT GGACCCGAGGAAGGGTACAAGGCTGCCTTGATTCAGTTTCAGCTGGATCA GGTGAAGCTGACAAAGGAGTACCAGAAGGTAATAGGGGAGAAGGATGCAG AGCTAGGTCGTGTCCGCGCGTTATACACGGCTGAGACGGGCAAGGTCTTG GATGGGGGCGTGGAGAAGAATGCGGATGCCAGTGGTGAGAAGGAGATGAT GGGCTCTACCATGGATTTTGGGACGTTTGTTGGAGGAAGAGGCGACCCGA TGGCAGCATTTGTGGGGATGAGCGCGGAGCAATTGCTAGCGCAGGTCGAG GTATTGTTGGACAGTGTAACTTCGTGGGAGGCGAGGGTGGCGGAGCTGGT GGAGAGTAAGGCGAACTACGCCGCTCAAGCGGCGCAGATGCGCTTACAGG CTGAGCGATCGGAATTGAGGCTGGGGGATCTGGTAGACCGCGTGAAATTG CAGCAGACGGAAATGGAGAAATATATTTTAATGGCGGAGGAGGGGAGGAT GCGGACGCTCAAGGATAGAGAGACGATTGAGGGCTTGGTCAAGGATTACA CGACTTTGGTATCTGAATCCCAGGCAGCAGAGGCCGAGCACACCTCGATG ATTGACGAGTTGGAGAACAAGCGCGATGAGCTCCAAGTGAAAGTGAAGGC CTACGAAAGGAACATCATTCAGCTGATCGACACCCAGGCCGAGATAGGGC TGAAGCAGGGAGAAGTCAAGCCATCCTCCTCTACCACCCCTTCCTTTTCT GCTGTTGCCCCTGCCGTCGAACAGCTTCAAAAGAAAGTGGAAGCTCAGGA AGAAGAAATCAAGCGTCTTCTTCTTGCCTCGTCCGCACCTGCTGCCCCTC CTACCCCCCAAAGTGGTGGCCCTGACGCTACGACCCTCTTAGCCCGTGCA GAAGCCGCTGAGGCAGAAATTGAGAGACTGAAGAAGGAGTTGGAACGAAC GAAGAAGACCCTCGAACAAGCGACAAAGGCAGGAGAGAAATTGGGGAAGG ACCATGCCATGCTGAGGGCGCAACGCGAGGAGGAGGAGCGGGCCGAGGCT GCTTTAAGAGAGGAAGTGACGGAATTACAAGCGAAGCTCGAGGCGGCTTA TAAGGGGAGCAAGGCTGAATTGGCCTTGGTACAGGATAAGCTCGTCAAGA TGGAGGGGGCGCTGATCAGGGAGGTAGAGAAGGCGCGGGCGGTCGCGAGC GAGGAGGCGATGCAGCGTTATCAGAAAGTGGTCGAAGTGGCGAATCAGGA GAAGGCCCAGGCGTTAGAAATGTACGCGCAGGAGAGTCGAAAGAGGAAAC TGATTCACAATAAGCTGTTGGAATTGCAGGGAAATATTCGGGTATTGTGC CGGGTAAGGCCGATGCTGGCGATGGAGATGGCAGGAGGGGAGGGAGGGGG GGGAAGGACGTGA back to topprotein sequence of NO08G03090.1 >NO08G03090.1-protein ID=NO08G03090.1-protein|Name=NO08G03090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=521bp MASQVWSTMRRRGGRFLENLNQTVEGASSEFLELGDSFLEGSRGGLNDEI GPEEGYKAALIQFQLDQVKLTKEYQKVIGEKDAELGRVRALYTAETGKVL DGGVEKNADASGEKEMMGSTMDFGTFVGGRGDPMAAFVGMSAEQLLAQVE VLLDSVTSWEARVAELVESKANYAAQAAQMRLQAERSELRLGDLVDRVKL QQTEMEKYILMAEEGRMRTLKDRETIEGLVKDYTTLVSESQAAEAEHTSM IDELENKRDELQVKVKAYERNIIQLIDTQAEIGLKQGEVKPSSSTTPSFS AVAPAVEQLQKKVEAQEEEIKRLLLASSAPAAPPTPQSGGPDATTLLARA EAAEAEIERLKKELERTKKTLEQATKAGEKLGKDHAMLRAQREEEERAEA ALREEVTELQAKLEAAYKGSKAELALVQDKLVKMEGALIREVEKARAVAS EEAMQRYQKVVEVANQEKAQALEMYAQESRKRKLIHNKLLELQGNIRVLC RVRPMLAMEMAGGEGGGGRT* back to topmRNA from alignment at chr8:854227..855789- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO08G03090.1 ID=NO08G03090.1|Name=NO08G03090.1|organism=Nannochloropsis oceanica|type=mRNA|length=1563bp|location=Sequence derived from alignment at chr8:854227..855789- (Nannochloropsis oceanica) ATGGCCTCCCAGGTCTGGAGCACGATGCGGCGGCGAGGCGGGCGGTTCCT
GGAAAACCTGAACCAGACGGTGGAGGGCGCGTCGAGTGAATTCCTAGAGC
TGGGGGACAGCTTTCTCGAGGGGTCTAGGGGCGGGTTGAACGACGAAATT
GGACCCGAGGAAGGGTACAAGGCTGCCTTGATTCAGTTTCAGCTGGATCA
GGTGAAGCTGACAAAGGAGTACCAGAAGGTAATAGGGGAGAAGGATGCAG
AGCTAGGTCGTGTCCGCGCGTTATACACGGCTGAGACGGGCAAGGTCTTG
GATGGGGGCGTGGAGAAGAATGCGGATGCCAGTGGTGAGAAGGAGATGAT
GGGCTCTACCATGGATTTTGGGACGTTTGTTGGAGGAAGAGGCGACCCGA
TGGCAGCATTTGTGGGGATGAGCGCGGAGCAATTGCTAGCGCAGGTCGAG
GTATTGTTGGACAGTGTAACTTCGTGGGAGGCGAGGGTGGCGGAGCTGGT
GGAGAGTAAGGCGAACTACGCCGCTCAAGCGGCGCAGATGCGCTTACAGG
CTGAGCGATCGGAATTGAGGCTGGGGGATCTGGTAGACCGCGTGAAATTG
CAGCAGACGGAAATGGAGAAATATATTTTAATGGCGGAGGAGGGGAGGAT
GCGGACGCTCAAGGATAGAGAGACGATTGAGGGCTTGGTCAAGGATTACA
CGACTTTGGTATCTGAATCCCAGGCAGCAGAGGCCGAGCACACCTCGATG
ATTGACGAGTTGGAGAACAAGCGCGATGAGCTCCAAGTGAAAGTGAAGGC
CTACGAAAGGAACATCATTCAGCTGATCGACACCCAGGCCGAGATAGGGC
TGAAGCAGGGAGAAGTCAAGCCATCCTCCTCTACCACCCCTTCCTTTTCT
GCTGTTGCCCCTGCCGTCGAACAGCTTCAAAAGAAAGTGGAAGCTCAGGA
AGAAGAAATCAAGCGTCTTCTTCTTGCCTCGTCCGCACCTGCTGCCCCTC
CTACCCCCCAAAGTGGTGGCCCTGACGCTACGACCCTCTTAGCCCGTGCA
GAAGCCGCTGAGGCAGAAATTGAGAGACTGAAGAAGGAGTTGGAACGAAC
GAAGAAGACCCTCGAACAAGCGACAAAGGCAGGAGAGAAATTGGGGAAGG
ACCATGCCATGCTGAGGGCGCAACGCGAGGAGGAGGAGCGGGCCGAGGCT
GCTTTAAGAGAGGAAGTGACGGAATTACAAGCGAAGCTCGAGGCGGCTTA
TAAGGGGAGCAAGGCTGAATTGGCCTTGGTACAGGATAAGCTCGTCAAGA
TGGAGGGGGCGCTGATCAGGGAGGTAGAGAAGGCGCGGGCGGTCGCGAGC
GAGGAGGCGATGCAGCGTTATCAGAAAGTGGTCGAAGTGGCGAATCAGGA
GAAGGCCCAGGCGTTAGAAATGTACGCGCAGGAGAGTCGAAAGAGGAAAC
TGATTCACAATAAGCTGTTGGAATTGCAGGGAAATATTCGGGTATTGTGC
CGGGTAAGGCCGATGCTGGCGATGGAGATGGCAGGAGGGGAGGGAGGGGG
GGGAAGGACGTGA back to topCoding sequence (CDS) from alignment at chr8:854227..855789- >NO08G03090.1 ID=NO08G03090.1|Name=NO08G03090.1|organism=Nannochloropsis oceanica|type=CDS|length=1563bp|location=Sequence derived from alignment at chr8:854227..855789- (Nannochloropsis oceanica) ATGGCCTCCCAGGTCTGGAGCACGATGCGGCGGCGAGGCGGGCGGTTCCT GGAAAACCTGAACCAGACGGTGGAGGGCGCGTCGAGTGAATTCCTAGAGC TGGGGGACAGCTTTCTCGAGGGGTCTAGGGGCGGGTTGAACGACGAAATT GGACCCGAGGAAGGGTACAAGGCTGCCTTGATTCAGTTTCAGCTGGATCA GGTGAAGCTGACAAAGGAGTACCAGAAGGTAATAGGGGAGAAGGATGCAG AGCTAGGTCGTGTCCGCGCGTTATACACGGCTGAGACGGGCAAGGTCTTG GATGGGGGCGTGGAGAAGAATGCGGATGCCAGTGGTGAGAAGGAGATGAT GGGCTCTACCATGGATTTTGGGACGTTTGTTGGAGGAAGAGGCGACCCGA TGGCAGCATTTGTGGGGATGAGCGCGGAGCAATTGCTAGCGCAGGTCGAG GTATTGTTGGACAGTGTAACTTCGTGGGAGGCGAGGGTGGCGGAGCTGGT GGAGAGTAAGGCGAACTACGCCGCTCAAGCGGCGCAGATGCGCTTACAGG CTGAGCGATCGGAATTGAGGCTGGGGGATCTGGTAGACCGCGTGAAATTG CAGCAGACGGAAATGGAGAAATATATTTTAATGGCGGAGGAGGGGAGGAT GCGGACGCTCAAGGATAGAGAGACGATTGAGGGCTTGGTCAAGGATTACA CGACTTTGGTATCTGAATCCCAGGCAGCAGAGGCCGAGCACACCTCGATG ATTGACGAGTTGGAGAACAAGCGCGATGAGCTCCAAGTGAAAGTGAAGGC CTACGAAAGGAACATCATTCAGCTGATCGACACCCAGGCCGAGATAGGGC TGAAGCAGGGAGAAGTCAAGCCATCCTCCTCTACCACCCCTTCCTTTTCT GCTGTTGCCCCTGCCGTCGAACAGCTTCAAAAGAAAGTGGAAGCTCAGGA AGAAGAAATCAAGCGTCTTCTTCTTGCCTCGTCCGCACCTGCTGCCCCTC CTACCCCCCAAAGTGGTGGCCCTGACGCTACGACCCTCTTAGCCCGTGCA GAAGCCGCTGAGGCAGAAATTGAGAGACTGAAGAAGGAGTTGGAACGAAC GAAGAAGACCCTCGAACAAGCGACAAAGGCAGGAGAGAAATTGGGGAAGG ACCATGCCATGCTGAGGGCGCAACGCGAGGAGGAGGAGCGGGCCGAGGCT GCTTTAAGAGAGGAAGTGACGGAATTACAAGCGAAGCTCGAGGCGGCTTA TAAGGGGAGCAAGGCTGAATTGGCCTTGGTACAGGATAAGCTCGTCAAGA TGGAGGGGGCGCTGATCAGGGAGGTAGAGAAGGCGCGGGCGGTCGCGAGC GAGGAGGCGATGCAGCGTTATCAGAAAGTGGTCGAAGTGGCGAATCAGGA GAAGGCCCAGGCGTTAGAAATGTACGCGCAGGAGAGTCGAAAGAGGAAAC TGATTCACAATAAGCTGTTGGAATTGCAGGGAAATATTCGGGTATTGTGC CGGGTAAGGCCGATGCTGGCGATGGAGATGGCAGGAGGGGAGGGAGGGGG GGGAAGGACGTGA back to top
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